RLG00000012213

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Forward (+)
16299702 .. 16301033
1332 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000012213

Sequence Viewer

Length: 1332 bp
ATGGATGCTGTAGTTCCACATCAAGTTGAGCATGACTTTTCAGACGTATTTGGTCCTGTACCAGTCCAGACCCCAGTGGATTCAGCTAATTCTGCCTCCCTCCAAGATAGTAGGGATCCCGTCGTCATTCACAACCGGTCACACTCTTTGATTGGTCCTTCATTCTGTGTAAGCCACTCACTGAACCTCAACAAACTGACTATTTATAACACAGAAGATTCAGTGGACCTAGTAGAGTACTGTCTCCATGAAGAAACCATCAAAGAATCTCAGGAACCTTTTGTTCGTGACCGTGTCATTGGGCATCCTCTAGAAAATGTTGAGGAGAGTATCTTGAAGAGTGAGAGTGTAGGCATCGAAGATTTTGAGGTTTTGAAGATTGTTGGGCAGGGTGGATTTGCAAAAGTATATCAGGTGAGGAAGAAGGGAACCTCGGAAATATACGCGATGAAGGTAATGCGAAAGGACAAGATCATGAAGAATAATCTCGCTGAATACATGAAATTTGAGAGGGATATATTAACAAAAGTTGATCATCCATTCATTGTCAAGCTTAGATACTCATTCCAAACCAAATACAGACTATATCTTGTGCTGGATTTTGTCAACGGAGGTCAGCTTTTCTTTCAACTCTACCACCATGGCCTTTTTTTGGAGGAGCTGGCACGAATATATGCAGCCGAGATTGTTTCTGCGGTGTCTCACCTTCATTCAAATGGCATAATGCATAGAGATCTTAAGCCTGAAAATATCCTATTGGATGCAGATGGCCATGCCATTTTAACTGATTTTGGGCTTGCGAAGAGCTTTGACGAAAACACGAGGTCTAATTCTCTATGTGGAACTTTAGAATACATGGCACCGGAAATAGTTCAGGGAAATGGCCACGATAAGGCAGCAGATTGGTGGAGTGTGGGAGTGGTATTGTTTCAGATGCTTACCGGAAAGCTTCCTTTTACTGGGAACCGTCAGAAATGTCAAGAGAAGATAGTAAAGGAGAAAATCAAGTTGCCAAGTTTTTTGTCAAGTGAAGCACATTCTCTGTTGAAAGGCTTGTTAACGAAGGACACAAGCAAGCGCCTAGGTTGTGGACCTCTGGGAGGTGATGAAGTCAAGCAGCACAAATGGTTCAAGCAAATTAATTGGAAGAAATTGGATGCTCGTGAAATCAAACCGAGCTTCCGACCTAACGTTGCCGGGCAGCACTGCATTGCCAACATTGAGAATTACTGGACTGACATGCCACTTGTGGACTCCCCGGCTGCTAGTCCGAAGGCTTCGTCTGGAAATCCCTTCTCCGGCTTTAGTTATGTTAGGTCTGCAGCCTCTTAA
Functional Annotation
Pfam Domains
Protein Families

Protein Analysis

444

Amino Acids

49.84

Weight (kDa)

6.53

Isoelectric Point (pI)

38.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 122 - 377 7.2e-75 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 124 - 360 4.6e-33 Protein tyrosine and serine/threonine kinase
ABC1 PF03109 196 - 277 2e-06 ABC1 atypical kinase-like domain
Kinase-like PF14531 218 - 360 3.4e-09 Kinase-like
Pkinase_fungal PF17667 229 - 309 5.7e-08 Fungal protein kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 207
AccB1I GGYRCC 1 cut(s) 859
AccII CGCG 1 cut(s) 446
AciI CCGC 1 cut(s) 695
AclI AACGTT 1 cut(s) 1191
AclWI GGATC 2 cut(s) 110, 123
AcoI YGGCCR 2 cut(s) 769, 883
AcsI RAATTY 1 cut(s) 503
AfaI GTAC 2 cut(s) 60, 239
AfiI CCNNNNNNNGG 5 cut(s) 652, 892, 959, 1100, 1298
AflII CTTAAG 1 cut(s) 737
AgeI ACCGGT 1 cut(s) 135
AgsI TTSAA 6 cut(s) 337, 376, 629, 714, 1048, 1132
AluBI AGCT 7 cut(s) 86, 553, 619, 661, 807, 949, 1179
AluI AGCT 7 cut(s) 86, 553, 619, 661, 807, 949, 1179
Alw26I GTCTC 2 cut(s) 248, 705
AlwI GGATC 2 cut(s) 110, 123
AoxI GGCC 3 cut(s) 643, 769, 883
ApeKI GCWGC 6 cut(s) 677, 896, 1117, 1201, 1262, 1322
ApoI RAATTY 1 cut(s) 503
ArsI GACNNNNNNTTYG 2 cut(s) 1265, 1297
AseI ATTAAT 1 cut(s) 1140
AsiGI ACCGGT 1 cut(s) 135
Asp700I GAANNNNTTC 1 cut(s) 870
AspA2I CCTAGG 1 cut(s) 1081
AspLEI GCGC 1 cut(s) 1080
AspS9I GGNCC 4 cut(s) 53, 155, 226, 1091
AsuC2I CCSGG 2 cut(s) 1198, 1259
AsuHPI GGTGA 3 cut(s) 427, 695, 1115
AvaII GGWCC 4 cut(s) 53, 155, 226, 1091
AvrII CCTAGG 1 cut(s) 1081
BalI TGGCCA 2 cut(s) 771, 885
BamHI GGATCC 1 cut(s) 115
BanI GGYRCC 1 cut(s) 859
BauI CACGAG 2 cut(s) 820, 1161
BbvI GCAGC 5 cut(s) 689, 908, 1129, 1213, 1249
BccI CCATC 2 cut(s) 266, 761
BclI TGATCA 1 cut(s) 532
BcnI CCSGG 2 cut(s) 1198, 1259
BcoDI GTCTC 2 cut(s) 248, 705
BfaI CTAG 4 cut(s) 230, 311, 1082, 1266
BfmI CTRYAG 2 cut(s) 9, 1320
BfoI RGCGCY 1 cut(s) 1081
BfrI CTTAAG 1 cut(s) 737
BglII AGATCT 1 cut(s) 733
BisI GCNGC 6 cut(s) 678, 897, 1118, 1202, 1263, 1323
BlnI CCTAGG 1 cut(s) 1081
BlsI GCNGC 6 cut(s) 679, 898, 1119, 1203, 1264, 1324
BmcAI AGTACT 1 cut(s) 239
Bme1390I CCNGG 2 cut(s) 1198, 1259
Bme18I GGWCC 4 cut(s) 53, 155, 226, 1091
BmgT120I GGNCC 4 cut(s) 53, 155, 226, 1091
BmiI GGNNCC 5 cut(s) 117, 276, 430, 861, 965
BmrFI CCNGG 2 cut(s) 1198, 1259
BmrI ACTGGG 2 cut(s) 68, 969
BmsI GCATC 5 cut(s) 313, 363, 751, 924, 1147
BmuI ACTGGG 2 cut(s) 68, 969
BpuMI CCSGG 2 cut(s) 1198, 1259
BsaJI CCNNGG 4 cut(s) 432, 640, 1081, 1257
BsaWI WCCGGW 3 cut(s) 135, 862, 941
Bsc4I CCNNNNNNNGG 5 cut(s) 652, 892, 959, 1100, 1298
Bse118I RCCGGY 1 cut(s) 135
Bse1I ACTGG 4 cut(s) 62, 74, 964, 1235
Bse3DI GCAATG 1 cut(s) 1209
BseDI CCNNGG 4 cut(s) 432, 640, 1081, 1257
BseGI GGATG 5 cut(s) 10, 304, 535, 766, 1162
BseLI CCNNNNNNNGG 5 cut(s) 652, 892, 959, 1100, 1298
BseMI GCAATG 1 cut(s) 1209
BseMII CTCAG 1 cut(s) 284
BseNI ACTGG 4 cut(s) 62, 74, 964, 1235
BseRI GAGGAG 2 cut(s) 338, 671
BseXI GCAGC 5 cut(s) 689, 908, 1129, 1213, 1249
Bsh1236I CGCG 1 cut(s) 446
BshFI GGCC 3 cut(s) 645, 771, 885
BshNI GGYRCC 1 cut(s) 859
BshTI ACCGGT 1 cut(s) 135
BsiSI CCGG 6 cut(s) 136, 863, 942, 1197, 1259, 1299
BslI CCNNNNNNNGG 5 cut(s) 652, 892, 959, 1100, 1298
BsmAI GTCTC 2 cut(s) 248, 705
BsnI GGCC 3 cut(s) 645, 771, 885
Bsp143I GATC 4 cut(s) 115, 471, 532, 733
Bsp19I CCATGG 1 cut(s) 640
BspACI CCGC 1 cut(s) 695
BspANI GGCC 3 cut(s) 645, 771, 885
BspCNI CTCAG 1 cut(s) 283
BspFNI CGCG 1 cut(s) 446
BspHI TCATGA 1 cut(s) 474
BspLI GGNNCC 5 cut(s) 117, 276, 430, 861, 965
BspMAI CTGCAG 1 cut(s) 1324
BspPI GGATC 2 cut(s) 110, 123
BspQI GCTCTTC 1 cut(s) 797
BspT107I GGYRCC 1 cut(s) 859
BspTI CTTAAG 1 cut(s) 737
BsrDI GCAATG 1 cut(s) 1209
BsrFI RCCGGY 1 cut(s) 135
BsrI ACTGG 4 cut(s) 62, 74, 964, 1235
BssAI RCCGGY 1 cut(s) 135
BssECI CCNNGG 4 cut(s) 432, 640, 1081, 1257
BssMI GATC 4 cut(s) 115, 471, 532, 733
BssSI CACGAG 2 cut(s) 820, 1161
BssT1I CCWWGG 2 cut(s) 640, 1081
Bst2BI CACGAG 2 cut(s) 820, 1161
Bst4CI ACNGT 3 cut(s) 242, 293, 968
Bst6I CTCTTC 2 cut(s) 332, 797
BstAFI CTTAAG 1 cut(s) 737
BstC8I GCNNGC 3 cut(s) 663, 798, 1076
BstDEI CTNAG 2 cut(s) 270, 554
BstDSI CCRYGG 1 cut(s) 640
BstENI CCTNNNNNAGG 1 cut(s) 1098
BstF5I GGATG 5 cut(s) 10, 304, 535, 766, 1162
BstFNI CGCG 1 cut(s) 446
BstH2I RGCGCY 1 cut(s) 1081
BstHHI GCGC 1 cut(s) 1080
BstKTI GATC 4 cut(s) 118, 474, 535, 736
BstMAI GTCTC 2 cut(s) 248, 705
BstMBI GATC 4 cut(s) 115, 471, 532, 733
BstMWI GCNNNNNNNGC 1 cut(s) 92
BstNSI RCATGY 1 cut(s) 1243
BstSCI CCNGG 2 cut(s) 1196, 1257
BstSFI CTRYAG 2 cut(s) 9, 1320
BstUI CGCG 1 cut(s) 446
BstV1I GCAGC 5 cut(s) 689, 908, 1129, 1213, 1249
BstX2I RGATCY 2 cut(s) 115, 733
BstYI RGATCY 2 cut(s) 115, 733
BsuRI GGCC 3 cut(s) 645, 771, 885
BtgI CCRYGG 1 cut(s) 640
BtgZI GCGATG 1 cut(s) 461
BtsCI GGATG 5 cut(s) 10, 304, 535, 766, 1162
BtsI GCAGTG 1 cut(s) 1204
BtsIMutI CAGTG 4 cut(s) 81, 179, 228, 1204
Cac8I GCNNGC 3 cut(s) 663, 798, 1076
CciI TCATGA 1 cut(s) 474
CfoI GCGC 1 cut(s) 1080
Cfr10I RCCGGY 1 cut(s) 135
Cfr13I GGNCC 4 cut(s) 53, 155, 226, 1091
Csp6I GTAC 2 cut(s) 59, 238
CspAI ACCGGT 1 cut(s) 135
CviAII CATG 8 cut(s) 32, 248, 475, 499, 641, 773, 856, 1240
CviQI GTAC 2 cut(s) 59, 238
DdeI CTNAG 2 cut(s) 270, 554
DpnI GATC 4 cut(s) 117, 473, 534, 735
DpnII GATC 4 cut(s) 115, 471, 532, 733
EaeI YGGCCR 2 cut(s) 769, 883
Eam1104I CTCTTC 2 cut(s) 332, 797
EarI CTCTTC 2 cut(s) 332, 797
Eco130I CCWWGG 2 cut(s) 640, 1081
Eco47I GGWCC 4 cut(s) 53, 155, 226, 1091
EcoNI CCTNNNNNAGG 1 cut(s) 1098
EcoT14I CCWWGG 2 cut(s) 640, 1081
EcoT22I ATGCAT 1 cut(s) 729
ErhI CCWWGG 2 cut(s) 640, 1081
FaeI CATG 8 cut(s) 35, 251, 478, 502, 644, 776, 859, 1243
FatI CATG 8 cut(s) 31, 247, 474, 498, 640, 772, 855, 1239
FbaI TGATCA 1 cut(s) 532
Fnu4HI GCNGC 6 cut(s) 678, 897, 1118, 1202, 1263, 1323
FokI GGATG 5 cut(s) 17, 291, 522, 773, 1169
Fsp4HI GCNGC 6 cut(s) 678, 897, 1118, 1202, 1263, 1323
FspBI CTAG 4 cut(s) 230, 311, 1082, 1266
GlaI GCGC 1 cut(s) 1079
GluI GCNGC 6 cut(s) 678, 897, 1118, 1202, 1263, 1323
HaeII RGCGCY 1 cut(s) 1081
HaeIII GGCC 3 cut(s) 645, 771, 885
HapII CCGG 6 cut(s) 136, 863, 942, 1197, 1259, 1299
HhaI GCGC 1 cut(s) 1080
Hin1II CATG 8 cut(s) 35, 251, 478, 502, 644, 776, 859, 1243
Hin6I GCGC 1 cut(s) 1078
HinP1I GCGC 1 cut(s) 1078
HincII GTYRAC 2 cut(s) 607, 1059
HindII GTYRAC 2 cut(s) 607, 1059
HindIII AAGCTT 2 cut(s) 551, 947
HinfI GANTC 4 cut(s) 80, 218, 266, 1253
HpaI GTTAAC 1 cut(s) 1059
HpaII CCGG 6 cut(s) 136, 863, 942, 1197, 1259, 1299
HphI GGTGA 3 cut(s) 427, 695, 1115
Hpy166II GTNNAC 5 cut(s) 226, 607, 1059, 1091, 1252
Hpy188I TCNGA 6 cut(s) 43, 436, 933, 972, 1184, 1272
Hpy188III TCNNGA 9 cut(s) 67, 272, 287, 311, 334, 475, 980, 1163, 1284
Hpy8I GTNNAC 5 cut(s) 226, 607, 1059, 1091, 1252
Hpy99I CGWCG 1 cut(s) 125
HpyAV CCTTC 7 cut(s) 168, 418, 445, 716, 1057, 1267, 1303
HpyCH4III ACNGT 3 cut(s) 242, 293, 968
HpyCH4IV ACGT 2 cut(s) 45, 1191
HpyCH4V TGCA 6 cut(s) 401, 677, 727, 764, 1209, 1322
HpyF10VI GCNNNNNNNGC 1 cut(s) 92
HpyF3I CTNAG 2 cut(s) 270, 554
HpySE526I ACGT 2 cut(s) 45, 1191
Hsp92II CATG 8 cut(s) 35, 251, 478, 502, 644, 776, 859, 1243
HspAI GCGC 1 cut(s) 1078
Ksp22I TGATCA 1 cut(s) 532
KspAI GTTAAC 1 cut(s) 1059
Kzo9I GATC 4 cut(s) 115, 471, 532, 733
LguI GCTCTTC 1 cut(s) 797
LmnI GCTCC 1 cut(s) 658
Lsp1109I GCAGC 5 cut(s) 689, 908, 1129, 1213, 1249
LweI GCATC 5 cut(s) 313, 363, 751, 924, 1147
MaeI CTAG 4 cut(s) 230, 311, 1082, 1266
MaeII ACGT 2 cut(s) 45, 1191
MaeIII GTNAC 2 cut(s) 138, 287
MalI GATC 4 cut(s) 117, 473, 534, 735
MboI GATC 4 cut(s) 115, 471, 532, 733
MflI RGATCY 2 cut(s) 115, 733
MlsI TGGCCA 2 cut(s) 771, 885
MluCI AATT 7 cut(s) 88, 503, 829, 1137, 1141, 1151, 1225
MluNI TGGCCA 2 cut(s) 771, 885
MlyI GAGTC 1 cut(s) 1247
MmeI TCCRAC 1 cut(s) 1207
Mox20I TGGCCA 2 cut(s) 771, 885
Mph1103I ATGCAT 1 cut(s) 729
MroXI GAANNNNTTC 1 cut(s) 870
MscI TGGCCA 2 cut(s) 771, 885
MseI TTAA 6 cut(s) 521, 738, 782, 1058, 1140, 1330
MslI CAYNNNNRTG 1 cut(s) 714
Msp20I TGGCCA 2 cut(s) 771, 885
MspCI CTTAAG 1 cut(s) 737
MspI CCGG 6 cut(s) 136, 863, 942, 1197, 1259, 1299
MspR9I CCNGG 2 cut(s) 1198, 1259
MvnI CGCG 1 cut(s) 446
MwoI GCNNNNNNNGC 1 cut(s) 92
NciI CCSGG 2 cut(s) 1198, 1259
NcoI CCATGG 1 cut(s) 640
NdeII GATC 4 cut(s) 115, 471, 532, 733
NlaIII CATG 8 cut(s) 35, 251, 478, 502, 644, 776, 859, 1243
NlaIV GGNNCC 5 cut(s) 117, 276, 430, 861, 965
NmeAIII GCCGAG 1 cut(s) 706
NmuCI GTSAC 2 cut(s) 138, 287
NsiI ATGCAT 1 cut(s) 729
NspI RCATGY 1 cut(s) 1243
PagI TCATGA 1 cut(s) 474
PciSI GCTCTTC 1 cut(s) 797
PdmI GAANNNNTTC 1 cut(s) 870
PfeI GAWTC 3 cut(s) 80, 218, 266
PflFI GACNNNGTC 1 cut(s) 293
PinAI ACCGGT 1 cut(s) 135
PkrI GCNGC 6 cut(s) 679, 898, 1119, 1203, 1264, 1324
PleI GAGTC 1 cut(s) 1247
PpsI GAGTC 1 cut(s) 1247
PshBI ATTAAT 1 cut(s) 1140
PsiI TTATAA 1 cut(s) 207
Psp1406I AACGTT 1 cut(s) 1191
PspN4I GGNNCC 5 cut(s) 117, 276, 430, 861, 965
PspPI GGNCC 4 cut(s) 53, 155, 226, 1091
PstI CTGCAG 1 cut(s) 1324
PsuI RGATCY 2 cut(s) 115, 733
PsyI GACNNNGTC 1 cut(s) 293
RsaI GTAC 2 cut(s) 60, 239
RsaNI GTAC 2 cut(s) 59, 238
RseI CAYNNNNRTG 1 cut(s) 714
SapI GCTCTTC 1 cut(s) 797
SaqAI TTAA 6 cut(s) 521, 738, 782, 1058, 1140, 1330
SatI GCNGC 6 cut(s) 678, 897, 1118, 1202, 1263, 1323
Sau3AI GATC 4 cut(s) 115, 471, 532, 733
Sau96I GGNCC 4 cut(s) 53, 155, 226, 1091
ScaI AGTACT 1 cut(s) 239
SchI GAGTC 1 cut(s) 1247
ScrFI CCNGG 2 cut(s) 1198, 1259
SfaNI GCATC 5 cut(s) 313, 363, 751, 924, 1147
SfcI CTRYAG 2 cut(s) 9, 1320
SinI GGWCC 4 cut(s) 53, 155, 226, 1091
SmiMI CAYNNNNRTG 1 cut(s) 714
SmlI CTYRAG 1 cut(s) 737
SmoI CTYRAG 1 cut(s) 737
Sse9I AATT 7 cut(s) 88, 503, 829, 1137, 1141, 1151, 1225
SsiI CCGC 1 cut(s) 695
SspMI CTAG 4 cut(s) 230, 311, 1082, 1266
StyD4I CCNGG 2 cut(s) 1196, 1257
StyI CCWWGG 2 cut(s) 640, 1081
TaaI ACNGT 3 cut(s) 242, 293, 968
TaiI ACGT 2 cut(s) 48, 1194
TaqI TCGA 1 cut(s) 357
TasI AATT 7 cut(s) 88, 503, 829, 1137, 1141, 1151, 1225
TatI WGTACW 1 cut(s) 237
TfiI GAWTC 3 cut(s) 80, 218, 266
Tru1I TTAA 6 cut(s) 521, 738, 782, 1058, 1140, 1330
Tru9I TTAA 6 cut(s) 521, 738, 782, 1058, 1140, 1330
TscAI CASTG 4 cut(s) 81, 186, 228, 1211
TseFI GTSAC 2 cut(s) 138, 287
TseI GCWGC 6 cut(s) 677, 896, 1117, 1201, 1262, 1322
Tsp45I GTSAC 2 cut(s) 138, 287
TspDTI ATGAA 8 cut(s) 150, 264, 464, 491, 515, 532, 698, 1122
TspGWI ACGGA 1 cut(s) 624
TspRI CASTG 4 cut(s) 81, 186, 228, 1211
Tth111I GACNNNGTC 1 cut(s) 293
Vha464I CTTAAG 1 cut(s) 737
VpaK11BI GGWCC 4 cut(s) 53, 155, 226, 1091
VspI ATTAAT 1 cut(s) 1140
XagI CCTNNNNNAGG 1 cut(s) 1098
XapI RAATTY 1 cut(s) 503
XbaI TCTAGA 1 cut(s) 310
XceI RCATGY 1 cut(s) 1243
XmaJI CCTAGG 1 cut(s) 1081
XmnI GAANNNNTTC 1 cut(s) 870
XspI CTAG 4 cut(s) 230, 311, 1082, 1266
ZrmI AGTACT 1 cut(s) 239
Zsp2I ATGCAT 1 cut(s) 729
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.