Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0013292

Physical Location & Seq

Genomic Coordinates Reverse (-)

2961233 .. 2966231

Gene Structure 4999 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G09660.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2406 bp

ATGGGATTTTACGGTGGTGGAAGCATGGCATCGGGTCGCCCTGAATCAACAGGAATTGATTCTCTCGGCATCGGGAAAATATTAGCTGTATACATCAAGGACAACGAGAATTTGGCCATCGACGAGGATAAGTTGCAGCTCACGGCGGAGCTCATCCGCGTATTCTCCGCATCACCTGGTAGAGACATAGTTTCTCAGGTGAATGAAGACGGTGGTGGTTCCTTCTCTTTGTCTCTTGATCTCCAACAATTCAAGAAAATATCTGATATCGAGAACTTTTTCATAAATCTAGAGGATAATCCTAAAGGAGTTATCCCATGTATGAATGCTGCTGTTCACAAGGTTCTTTTTGATCAATGGGAGACTAATGAGTTTGAGAATGTTATGAAGATCAATGTTCGTCTGCATAATTATCCTGAATCTTCTATCTCCCTGAAAAACCTGAGAGCAGCTTATATTGGAAAGCTTGTAACCGTTCATGGGACTGTTGTTAAAGTTAGTACTGTGAAACCCCTTGTCACACAGATGGCTTTTGACTGTGGAAAGTGCAAAACTGGCATAACCCGGGAATTTACTGATGGAAAGTTTTCTCCTCCACTAAAATGTGATTCCCATGGATGCAAGTCCAAAACGTTTACTCCAATCCGGTCCTCTGCTCAGACAATTGATTTTCAGAAAATCAGGGTACAGGAATTGCAAAAGCCTGAAGACCACGAAGAAGGACGGGTACCCAGAACTGTAGAATGTGAGCTGATGGAAGACCTTGTGGACATATGTATCCCTGGTGATGTGGTGACAGTTACAGGGATTATAGGAGTAATTAATAATTACATGGACATTGGGGGAGGGAAATCGAAGACCAAGAATCAAGGATTTTACTATTTGTTTATAGAGGCAGTTTCAGTGAAAAACACCAAGCGGCAGTCTGCATTTGAGAACTCAGAAGACTCTAGTAGCAGTGCCCAGACTGCAGATGTTGGTGACTTATATTCATTCTCTCAGAGAGACTTGGAATTTATTGTGAAGTTCAAAGAAGAATATGGTTCTGATACATTCCGTCGCATACTTCATTCAGTCTGCCCGTCTATTTATGGCCATGAAATTGTCAAAGCTGGGATAACACTATCTCTTTTTGGAGGTGTAAGGAAGCACTCGATGGATCGGAACAAAGTTCCAGTCAGAGGAGACATTCATGTCATTATTGTTGGTGACCCAGGATTGGGCAAAAGTCAGCTCTTGCAAGCAGCAGCTGCCATTTCCCCTCGTGGCATTTATGTATGTGGTAATGCGACGACTAGAGCAGGGCTCACCGTTGCTGTAGTGAAAGATTCCATGACAAATGACTATGCGTTTGAGGCTGGTGCCATGGTACTCGCAGATGGCGGGTTGTGCTGTATTGATGAGTTCGATAAAATGACCACCGAGCATCAGGCGTTGCTAGAAGCAATGGAACAACAATGTGTCTCTGTTGCAAAGGCTGGGCTTGTAGCTAGTCTATCAGCTCGAACTTCTGTTATAGCAGCAGCAAATCCTGTTGGTGGCCACTACAACCGTGCAAAAACTGTAAATGAGAACTTAAAAATGAGTGCTGCCCTTCTCTCACGGTTTGATTTAGTTTTCATATTACTTGACAAACCTGATGAGCTACTCGACAAGCAAGTCTCAGAGCATATTATGTCGCTTCATTCTGCAAGTGGAGAAACATCACCTGCACTAAAGAAGTTTAAACCAGTAAATGCAGCATCACAGAATGCTGGGTATGCAAACATGCATGCAGAAGGGAATTCTCTACTTTCAAGACTGCGGTTGGACTCTGAGAAAGATGACGACTTTTCTCCGGTTCCTGGCCAATTGCTTAGGAAATATATTTCCTATGCACGGAATTTTGTCAATCCTAAGATGTCAAAGGATGCTGGAGAGATCATACAGAAGTTTTACTTGAAGCTGAGAGACCATAACACATCTGCTGATTCCACACCAATAACAGCAAGACAACTGGAAAGTTTGGTTAGGCTTGCTCAAGCTAGAGCTCGGGTTGATTTAAGGGAAGAAATAACAGTCCAAGACGCTATGGATGTGGTTGAAATAATGAAAGAATCGTTGTATGATAAGCTTATAGATGAACATGGTGTTGTGGATTTTGGTCGGAGTGGAGGAATGAGTCAACAAAAGGAGGCCAAACGCTTCTTAAGTGCTCTTGATAAGCAATCAGAGCTGCAGCAGAAAGATTGTTTCTCTGTTTCTGAGATGTATAGTTTAGCTGATAGAATCGGCCTACGAGTTCCAGACATTGATACTTTCCTAGAGAACCTGAATATTGCCGGATATTTACTCAAGAAGGGACCAAAGACTTACCAGGTCCTTTCCTCATCTTATTCCCGGAGTCAGTCATCCAGGTCAAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000280 GO:0000724 GO:0000725 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007140 GO:0007143 GO:0007275 GO:0007276 GO:0007292 GO:0008150 GO:0008152 GO:0009555 GO:0009987 GO:0016043 GO:0019953 GO:0022402 GO:0022412 GO:0022414 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032504 GO:0032991 GO:0033554 GO:0034641 GO:0042555 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0044703 GO:0046483 GO:0048229 GO:0048232 GO:0048285 GO:0048609 GO:0048856 GO:0050896 GO:0051321 GO:0051704 GO:0051716 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0097362 GO:0140013 GO:1901360 GO:1903046

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MCM MCM_OB

Protein Analysis

801

Amino Acids

88.12

Weight (kDa)

6.21

Isoelectric Point (pI)

44.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MCM_OB	PF17207	145 - 273	8.8e-29	MCM OB domain
MCM	PF00493	349 - 562	2.9e-89	MCM P-loop domain
AAA_5	PF07728	398 - 536	1.2e-08	AAA domain (dynein-related subfamily)
MCM_lid	PF17855	618 - 701	1.3e-26	MCM AAA-lid domain
WHD_MCM8	PF25051	713 - 748	8.1e-10	MCM8 winged helix domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0013292)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G09660 AT3G09660 AT3G09660
fragaria_vesca	FvH4_6g15280 FvH4_6g15280
malus_domestica	MD04G1104500.v1.1
prunus_persica	Prupe.6G241500_v2.0.a1 Prupe.6G241500_v2.0.a1
pyrus_communis	pycom04g09950
rosa_chinensis	RchiOBHm_Chr3g0468711
rosa_laevigata	RLG00000024414
rosa_multiflora	Rmu_sc0011538.1_g000001
rosa_roxburghii	Rroxscaffold_6G00412640
rosa_rugosa	Rorug03G0096200
rosa_samantha	Rh3AG145200 Rh3BG167800 Rh3DG166500
rosa_wichuraiana	Rw3G013700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1717
AasI	GACNNNNNNGTC	2 cut(s)	1193, 1658
Acc36I	ACCTGC	1 cut(s)	1717
Acc65I	GGTACC	1 cut(s)	727
AccB1I	GGYRCC	2 cut(s)	727, 1361
AccI	GTMKAC	1 cut(s)	90
AccII	CGCG	1 cut(s)	159
AciI	CCGC	6 cut(s)	146, 157, 168, 919, 1383, 1804
AclI	AACGTT	1 cut(s)	632
AclWI	GGATC	1 cut(s)	1167
AcoI	YGGCCR	4 cut(s)	114, 1093, 1540, 1846
AcsI	RAATTY	5 cut(s)	109, 569, 1013, 1783, 1882
AcuI	CTGAAG	1 cut(s)	726
AfaI	GTAC	4 cut(s)	502, 687, 729, 1371
AfiI	CCNNNNNNNGG	7 cut(s)	480, 1181, 1219, 1220, 1538, 1844, 1878
AflII	CTTAAG	1 cut(s)	2188
AgsI	TTSAA	5 cut(s)	253, 1030, 1797, 1942, 2084
AjnI	CCWGG	6 cut(s)	175, 781, 1213, 1843, 2355, 2393
Alw21I	GWGCWC	3 cut(s)	153, 2032, 2197
Alw26I	GTCTC	8 cut(s)	177, 237, 356, 999, 1179, 1468, 1666, 1944
AlwI	GGATC	1 cut(s)	1167
AlwNI	CAGNNNCTG	1 cut(s)	1250
Ama87I	CYCGRG	2 cut(s)	564, 2031
AoxI	GGCC	6 cut(s)	114, 1093, 1540, 1846, 2175, 2272
ApoI	RAATTY	5 cut(s)	109, 569, 1013, 1783, 1882
ArsI	GACNNNNNNTTYG	4 cut(s)	1161, 1193, 1334, 1366
AseI	ATTAAT	1 cut(s)	822
Asp700I	GAANNNNTTC	3 cut(s)	58, 278, 586
Asp718I	GGTACC	1 cut(s)	727
AspS9I	GGNCC	3 cut(s)	648, 2342, 2359
AsuC2I	CCSGG	3 cut(s)	565, 566, 2380
AsuHPI	GGTGA	8 cut(s)	165, 211, 797, 805, 992, 1220, 1300, 1698
AvaI	CYCGRG	2 cut(s)	564, 2031
AvaII	GGWCC	3 cut(s)	648, 2342, 2359
BaeGI	GKGCMC	1 cut(s)	964
BaeI	ACNNNNGTAYC	2 cut(s)	760, 793
BalI	TGGCCA	4 cut(s)	116, 1095, 1542, 1848
BanI	GGYRCC	2 cut(s)	727, 1361
BanII	GRGCYC	3 cut(s)	153, 1308, 2032
BarI	GAAGNNNNNNTAC	2 cut(s)	711, 743
BauI	CACGAG	1 cut(s)	1263
BbsI	GAAGAC	5 cut(s)	213, 714, 765, 863, 951
Bbv12I	GWGCWC	3 cut(s)	153, 2032, 2197
BccI	CCATC	6 cut(s)	125, 520, 572, 748, 1150, 1373
BceAI	ACGGC	1 cut(s)	159
BciT130I	CCWGG	6 cut(s)	177, 783, 1215, 1845, 2357, 2395
BciVI	GTATCC	1 cut(s)	788
BclI	TGATCA	1 cut(s)	352
BcnI	CCSGG	3 cut(s)	565, 566, 2380
BcoDI	GTCTC	8 cut(s)	177, 237, 356, 999, 1179, 1468, 1666, 1944
BfaI	CTAG	7 cut(s)	290, 951, 1296, 1439, 1491, 2025, 2303
BfmI	CTRYAG	4 cut(s)	738, 969, 1317, 2216
BfrI	CTTAAG	1 cut(s)	2188
BfuAI	ACCTGC	1 cut(s)	1717
BfuI	GTATCC	1 cut(s)	788
BmcAI	AGTACT	1 cut(s)	502
Bme1390I	CCNGG	9 cut(s)	177, 565, 566, 783, 1215, 1845, 2357, 2380, 2395
Bme18I	GGWCC	3 cut(s)	648, 2342, 2359
BmeT110I	CYCGRG	2 cut(s)	564, 2031
BmgT120I	GGNCC	3 cut(s)	648, 2342, 2359
BmiI	GGNNCC	5 cut(s)	220, 729, 1363, 1842, 2343
BmrFI	CCNGG	9 cut(s)	177, 565, 566, 783, 1215, 1845, 2357, 2380, 2395
BmsI	GCATC	7 cut(s)	38, 78, 179, 608, 1435, 1751, 1900
BpiI	GAAGAC	5 cut(s)	213, 714, 765, 863, 951
BplI	GAGNNNNNCTC	2 cut(s)	1290, 1322
BpmI	CTGGAG	1 cut(s)	1935
Bpu10I	CCTNAGC	1 cut(s)	1856
BpuEI	CTTGAG	2 cut(s)	2004, 2318
BpuMI	CCSGG	3 cut(s)	565, 566, 2380
BsaI	GGTCTC	1 cut(s)	1944
BsaJI	CCNNGG	5 cut(s)	564, 613, 781, 1213, 1365
BsaWI	WCCGGW	2 cut(s)	645, 1837
BsaXI	ACNNNNNCTCC	2 cut(s)	622, 652
Bsc4I	CCNNNNNNNGG	7 cut(s)	480, 1181, 1219, 1220, 1538, 1844, 1878
Bse1I	ACTGG	4 cut(s)	559, 1175, 1730, 2001
Bse3DI	GCAATG	1 cut(s)	1452
BseBI	CCWGG	6 cut(s)	177, 783, 1215, 1845, 2357, 2395
BseDI	CCNNGG	5 cut(s)	564, 613, 781, 1213, 1365
BseGI	GGATG	5 cut(s)	153, 623, 1915, 2080, 2390
BseLI	CCNNNNNNNGG	7 cut(s)	480, 1181, 1219, 1220, 1538, 1844, 1878
BseMI	GCAATG	1 cut(s)	1452
BseMII	CTCAG	9 cut(s)	209, 434, 671, 954, 1013, 1677, 1806, 1937, 2235
BseNI	ACTGG	4 cut(s)	559, 1175, 1730, 2001
BseRI	GAGGAG	2 cut(s)	582, 1197
BseSI	GKGCMC	1 cut(s)	964
BseYI	CCCAGC	3 cut(s)	1112, 1478, 1754
BsgI	GTGCAG	1 cut(s)	1695
Bsh1236I	CGCG	1 cut(s)	159
BshFI	GGCC	6 cut(s)	116, 1095, 1542, 1848, 2177, 2274
BshNI	GGYRCC	2 cut(s)	727, 1361
BsiHKAI	GWGCWC	3 cut(s)	153, 2032, 2197
BsiHKCI	CYCGRG	2 cut(s)	564, 2031
BsiSI	CCGG	5 cut(s)	565, 646, 1838, 2322, 2380
BslFI	GGGAC	2 cut(s)	496, 2355
BslI	CCNNNNNNNGG	7 cut(s)	480, 1181, 1219, 1220, 1538, 1844, 1878
BsmAI	GTCTC	8 cut(s)	177, 237, 356, 999, 1179, 1468, 1666, 1944
BsmFI	GGGAC	2 cut(s)	496, 2355
BsmI	GAATGC	2 cut(s)	331, 1756
BsnI	GGCC	6 cut(s)	116, 1095, 1542, 1848, 2177, 2274
Bso31I	GGTCTC	1 cut(s)	1944
BsoBI	CYCGRG	2 cut(s)	564, 2031
Bsp1286I	GDGCHC	5 cut(s)	153, 964, 1308, 2032, 2197
Bsp143I	GATC	5 cut(s)	238, 352, 390, 1159, 1920
Bsp19I	CCATGG	2 cut(s)	613, 1365
BspACI	CCGC	6 cut(s)	146, 157, 168, 919, 1383, 1804
BspANI	GGCC	6 cut(s)	116, 1095, 1542, 1848, 2177, 2274
BspCNI	CTCAG	9 cut(s)	208, 435, 670, 953, 1012, 1676, 1807, 1938, 2236
BspFNI	CGCG	1 cut(s)	159
BspLI	GGNNCC	5 cut(s)	220, 729, 1363, 1842, 2343
BspMAI	CTGCAG	2 cut(s)	973, 2220
BspMI	ACCTGC	1 cut(s)	1717
BspPI	GGATC	1 cut(s)	1167
BspT107I	GGYRCC	2 cut(s)	727, 1361
BspTI	CTTAAG	1 cut(s)	2188
BspTNI	GGTCTC	1 cut(s)	1944
BsrDI	GCAATG	1 cut(s)	1452
BsrI	ACTGG	4 cut(s)	559, 1175, 1730, 2001
BssECI	CCNNGG	5 cut(s)	564, 613, 781, 1213, 1365
BssMI	GATC	5 cut(s)	238, 352, 390, 1159, 1920
BssNAI	GTATAC	1 cut(s)	91
BssSI	CACGAG	1 cut(s)	1263
BssT1I	CCWWGG	2 cut(s)	613, 1365
Bst1107I	GTATAC	1 cut(s)	91
Bst2BI	CACGAG	1 cut(s)	1263
Bst2UI	CCWGG	6 cut(s)	177, 783, 1215, 1845, 2357, 2395
BstAFI	CTTAAG	1 cut(s)	2188
BstAPI	GCANNNNNTGC	1 cut(s)	1250
BstC8I	GCNNGC	3 cut(s)	1242, 1773, 2016
BstDSI	CCRYGG	2 cut(s)	613, 1365
BstEII	GGTNACC	1 cut(s)	1208
BstF5I	GGATG	5 cut(s)	153, 623, 1915, 2080, 2390
BstFNI	CGCG	1 cut(s)	159
BstKTI	GATC	5 cut(s)	241, 355, 393, 1162, 1923
BstMAI	GTCTC	8 cut(s)	177, 237, 356, 999, 1179, 1468, 1666, 1944
BstMBI	GATC	5 cut(s)	238, 352, 390, 1159, 1920
BstMWI	GCNNNNNNNGC	7 cut(s)	555, 968, 1250, 1355, 1389, 1760, 2212
BstNI	CCWGG	6 cut(s)	177, 783, 1215, 1845, 2357, 2395
BstNSI	RCATGY	2 cut(s)	1771, 1775
BstPI	GGTNACC	1 cut(s)	1208
BstSCI	CCNGG	9 cut(s)	175, 563, 564, 781, 1213, 1843, 2355, 2378, 2393
BstSFI	CTRYAG	4 cut(s)	738, 969, 1317, 2216
BstSLI	GKGCMC	1 cut(s)	964
BstUI	CGCG	1 cut(s)	159
BstV2I	GAAGAC	5 cut(s)	213, 714, 765, 863, 951
BstZ17I	GTATAC	1 cut(s)	91
BsuI	GTATCC	1 cut(s)	788
BsuRI	GGCC	6 cut(s)	116, 1095, 1542, 1848, 2177, 2274
BtgI	CCRYGG	2 cut(s)	613, 1365
BtsCI	GGATG	5 cut(s)	153, 623, 1915, 2080, 2390
BtsI	GCAGTG	1 cut(s)	964
BtsIMutI	CAGTG	2 cut(s)	909, 964
BveI	ACCTGC	1 cut(s)	1717
Cac8I	GCNNGC	3 cut(s)	1242, 1773, 2016
CaiI	CAGNNNCTG	1 cut(s)	1250
Cfr13I	GGNCC	3 cut(s)	648, 2342, 2359
Cfr9I	CCCGGG	1 cut(s)	564
CseI	GACGC	1 cut(s)	2075
CsiI	ACCWGGT	2 cut(s)	175, 2355
Csp6I	GTAC	4 cut(s)	501, 686, 728, 1370
CviQI	GTAC	4 cut(s)	501, 686, 728, 1370
DpnI	GATC	5 cut(s)	240, 354, 392, 1161, 1922
DpnII	GATC	5 cut(s)	238, 352, 390, 1159, 1920
DraI	TTTAAA	1 cut(s)	1726
DrdI	GACNNNNNNGTC	2 cut(s)	1193, 1658
DseDI	GACNNNNNNGTC	2 cut(s)	1193, 1658
EaeI	YGGCCR	4 cut(s)	114, 1093, 1540, 1846
EciI	GGCGGA	1 cut(s)	161
Ecl136II	GAGCTC	2 cut(s)	151, 2030
Eco130I	CCWWGG	2 cut(s)	613, 1365
Eco24I	GRGCYC	3 cut(s)	153, 1308, 2032
Eco31I	GGTCTC	1 cut(s)	1944
Eco32I	GATATC	1 cut(s)	268
Eco47I	GGWCC	3 cut(s)	648, 2342, 2359
Eco53kI	GAGCTC	2 cut(s)	151, 2030
Eco57I	CTGAAG	1 cut(s)	726
Eco88I	CYCGRG	2 cut(s)	564, 2031
Eco91I	GGTNACC	1 cut(s)	1208
EcoICRI	GAGCTC	2 cut(s)	151, 2030
EcoO109I	RGGNCCY	1 cut(s)	2359
EcoO65I	GGTNACC	1 cut(s)	1208
EcoRI	GAATTC	1 cut(s)	1783
EcoRII	CCWGG	6 cut(s)	175, 781, 1213, 1843, 2355, 2393
EcoRV	GATATC	1 cut(s)	268
EcoT14I	CCWWGG	2 cut(s)	613, 1365
EcoT22I	ATGCAT	1 cut(s)	1773
EcoT38I	GRGCYC	3 cut(s)	153, 1308, 2032
ErhI	CCWWGG	2 cut(s)	613, 1365
FalI	AAGNNNNNCTT	2 cut(s)	1922, 1954
FaqI	GGGAC	2 cut(s)	496, 2355
FauI	CCCGC	1 cut(s)	1376
FauNDI	CATATG	1 cut(s)	773
FbaI	TGATCA	1 cut(s)	352
FblI	GTMKAC	1 cut(s)	90
FokI	GGATG	5 cut(s)	140, 630, 1922, 2087, 2377
FriOI	GRGCYC	3 cut(s)	153, 1308, 2032
FspBI	CTAG	7 cut(s)	290, 951, 1296, 1439, 1491, 2025, 2303
GsaI	CCCAGC	3 cut(s)	1116, 1482, 1758
GsuI	CTGGAG	1 cut(s)	1935
HaeIII	GGCC	6 cut(s)	116, 1095, 1542, 1848, 2177, 2274
HapII	CCGG	5 cut(s)	565, 646, 1838, 2322, 2380
HgaI	GACGC	1 cut(s)	2075
HincII	GTYRAC	1 cut(s)	2165
HindII	GTYRAC	1 cut(s)	2165
HindIII	AAGCTT	2 cut(s)	464, 2111
HpaII	CCGG	5 cut(s)	565, 646, 1838, 2322, 2380
HphI	GGTGA	8 cut(s)	165, 211, 797, 805, 992, 1220, 1300, 1698
Hpy166II	GTNNAC	5 cut(s)	91, 337, 636, 769, 2165
Hpy8I	GTNNAC	5 cut(s)	91, 337, 636, 769, 2165
Hpy99I	CGWCG	3 cut(s)	125, 1062, 1294
HpyAV	CCTTC	5 cut(s)	232, 713, 1604, 1772, 2332
HpyCH4IV	ACGT	1 cut(s)	632
HpyF10VI	GCNNNNNNNGC	7 cut(s)	555, 968, 1250, 1355, 1389, 1760, 2212
HpySE526I	ACGT	1 cut(s)	632
KpnI	GGTACC	1 cut(s)	731
Ksp22I	TGATCA	1 cut(s)	352
Kzo9I	GATC	5 cut(s)	238, 352, 390, 1159, 1920
LmnI	GCTCC	1 cut(s)	148
LweI	GCATC	7 cut(s)	38, 78, 179, 608, 1435, 1751, 1900
MabI	ACCWGGT	2 cut(s)	175, 2355
MaeI	CTAG	7 cut(s)	290, 951, 1296, 1439, 1491, 2025, 2303
MaeII	ACGT	1 cut(s)	632
MaeIII	GTNAC	6 cut(s)	469, 517, 793, 799, 980, 1208
MalI	GATC	5 cut(s)	240, 354, 392, 1161, 1922
MboI	GATC	5 cut(s)	238, 352, 390, 1159, 1920
MfeI	CAATTG	2 cut(s)	663, 1850
MhlI	GDGCHC	5 cut(s)	153, 964, 1308, 2032, 2197
MlsI	TGGCCA	4 cut(s)	116, 1095, 1542, 1848
MluNI	TGGCCA	4 cut(s)	116, 1095, 1542, 1848
MlyI	GAGTC	4 cut(s)	941, 1805, 2170, 2392
MmeI	TCCRAC	3 cut(s)	268, 1788, 2126
Mox20I	TGGCCA	4 cut(s)	116, 1095, 1542, 1848
Mph1103I	ATGCAT	1 cut(s)	1773
MroXI	GAANNNNTTC	3 cut(s)	58, 278, 586
MscI	TGGCCA	4 cut(s)	116, 1095, 1542, 1848
MseI	TTAA	6 cut(s)	492, 822, 1577, 1725, 2042, 2189
MslI	CAYNNNNRTG	2 cut(s)	524, 601
Msp20I	TGGCCA	4 cut(s)	116, 1095, 1542, 1848
MspA1I	CMGCKG	1 cut(s)	1250
MspCI	CTTAAG	1 cut(s)	2188
MspI	CCGG	5 cut(s)	565, 646, 1838, 2322, 2380
MspR9I	CCNGG	9 cut(s)	177, 565, 566, 783, 1215, 1845, 2357, 2380, 2395
MssI	GTTTAAAC	1 cut(s)	1726
MunI	CAATTG	2 cut(s)	663, 1850
Mva1269I	GAATGC	2 cut(s)	331, 1756
MvaI	CCWGG	6 cut(s)	177, 783, 1215, 1845, 2357, 2395
MvnI	CGCG	1 cut(s)	159
MwoI	GCNNNNNNNGC	7 cut(s)	555, 968, 1250, 1355, 1389, 1760, 2212
NciI	CCSGG	3 cut(s)	565, 566, 2380
NcoI	CCATGG	2 cut(s)	613, 1365
NdeI	CATATG	1 cut(s)	773
NdeII	GATC	5 cut(s)	238, 352, 390, 1159, 1920
NlaIV	GGNNCC	5 cut(s)	220, 729, 1363, 1842, 2343
NmeAIII	GCCGAG	1 cut(s)	45
NmuCI	GTSAC	4 cut(s)	517, 793, 980, 1208
NsiI	ATGCAT	1 cut(s)	1773
NspI	RCATGY	2 cut(s)	1771, 1775
PaeI	GCATGC	1 cut(s)	1775
PaqCI	CACCTGC	1 cut(s)	1717
PctI	GAATGC	2 cut(s)	331, 1756
PdmI	GAANNNNTTC	3 cut(s)	58, 278, 586
PfeI	GAWTC	9 cut(s)	44, 59, 419, 608, 865, 1328, 1970, 2096, 2268
PfoI	TCCNGGA	1 cut(s)	2378
PleI	GAGTC	4 cut(s)	941, 1805, 2169, 2391
PmeI	GTTTAAAC	1 cut(s)	1726
PpsI	GAGTC	4 cut(s)	941, 1805, 2169, 2391
PpuMI	RGGWCCY	1 cut(s)	2359
PshBI	ATTAAT	1 cut(s)	822
Psp124BI	GAGCTC	2 cut(s)	153, 2032
Psp1406I	AACGTT	1 cut(s)	632
Psp5II	RGGWCCY	1 cut(s)	2359
Psp6I	CCWGG	6 cut(s)	175, 781, 1213, 1843, 2355, 2393
PspEI	GGTNACC	1 cut(s)	1208
PspFI	CCCAGC	3 cut(s)	1112, 1478, 1754
PspGI	CCWGG	6 cut(s)	175, 781, 1213, 1843, 2355, 2393
PspN4I	GGNNCC	5 cut(s)	220, 729, 1363, 1842, 2343
PspPI	GGNCC	3 cut(s)	648, 2342, 2359
PspPPI	RGGWCCY	1 cut(s)	2359
PstI	CTGCAG	2 cut(s)	973, 2220
PstNI	CAGNNNCTG	1 cut(s)	1250
PvuII	CAGCTG	1 cut(s)	1250
RsaI	GTAC	4 cut(s)	502, 687, 729, 1371
RsaNI	GTAC	4 cut(s)	501, 686, 728, 1370
RseI	CAYNNNNRTG	2 cut(s)	524, 601
SacI	GAGCTC	2 cut(s)	153, 2032
SaqAI	TTAA	6 cut(s)	492, 822, 1577, 1725, 2042, 2189
Sau3AI	GATC	5 cut(s)	238, 352, 390, 1159, 1920
Sau96I	GGNCC	3 cut(s)	648, 2342, 2359
ScaI	AGTACT	1 cut(s)	502
SchI	GAGTC	4 cut(s)	941, 1805, 2170, 2392
ScrFI	CCNGG	9 cut(s)	177, 565, 566, 783, 1215, 1845, 2357, 2380, 2395
SduI	GDGCHC	5 cut(s)	153, 964, 1308, 2032, 2197
SexAI	ACCWGGT	2 cut(s)	175, 2355
SfaNI	GCATC	7 cut(s)	38, 78, 179, 608, 1435, 1751, 1900
SfcI	CTRYAG	4 cut(s)	738, 969, 1317, 2216
SinI	GGWCC	3 cut(s)	648, 2342, 2359
SmaI	CCCGGG	1 cut(s)	566
SmiMI	CAYNNNNRTG	2 cut(s)	524, 601
SmlI	CTYRAG	3 cut(s)	2019, 2188, 2333
SmoI	CTYRAG	3 cut(s)	2019, 2188, 2333
SphI	GCATGC	1 cut(s)	1775
SsiI	CCGC	6 cut(s)	146, 157, 168, 919, 1383, 1804
SspI	AATATT	2 cut(s)	81, 2317
SspMI	CTAG	7 cut(s)	290, 951, 1296, 1439, 1491, 2025, 2303
SstI	GAGCTC	2 cut(s)	153, 2032
StyD4I	CCNGG	9 cut(s)	175, 563, 564, 781, 1213, 1843, 2355, 2378, 2393
StyI	CCWWGG	2 cut(s)	613, 1365
TaiI	ACGT	1 cut(s)	635
TaqI	TCGA	7 cut(s)	120, 270, 854, 1154, 1407, 1504, 1650
TatI	WGTACW	1 cut(s)	500
TauI	GCSGC	1 cut(s)	922
TfiI	GAWTC	9 cut(s)	44, 59, 419, 608, 865, 1328, 1970, 2096, 2268
Tru1I	TTAA	6 cut(s)	492, 822, 1577, 1725, 2042, 2189
Tru9I	TTAA	6 cut(s)	492, 822, 1577, 1725, 2042, 2189
TscAI	CASTG	2 cut(s)	909, 964
TseFI	GTSAC	4 cut(s)	517, 793, 980, 1208
Tsp45I	GTSAC	4 cut(s)	517, 793, 980, 1208
TspGWI	ACGGA	2 cut(s)	1046, 1894
TspMI	CCCGGG	1 cut(s)	564
TspRI	CASTG	2 cut(s)	909, 964
Vha464I	CTTAAG	1 cut(s)	2188
VpaK11BI	GGWCC	3 cut(s)	648, 2342, 2359
VspI	ATTAAT	1 cut(s)	822
XapI	RAATTY	5 cut(s)	109, 569, 1013, 1783, 1882
XbaI	TCTAGA	1 cut(s)	289
XceI	RCATGY	2 cut(s)	1771, 1775
XmaI	CCCGGG	1 cut(s)	564
XmiI	GTMKAC	1 cut(s)	90
XmnI	GAANNNNTTC	3 cut(s)	58, 278, 586
XspI	CTAG	7 cut(s)	290, 951, 1296, 1439, 1491, 2025, 2303
ZrmI	AGTACT	1 cut(s)	502
Zsp2I	ATGCAT	1 cut(s)	1773

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.