Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0011538.1

Orthogroup ID

OG0013292

Physical Location & Seq

Genomic Coordinates Forward (+)

665 .. 5762

Gene Structure 5098 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0011538.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2154 bp

atgtacggcgcggcggggaagggcacgagctcgagctacggcgattcatactcgtctgggctcagcgagatctgggccgcgtacttggcccaaatcgagctcggcgacgacaaaccctggctcaacctcacacgctccctcgtcagcttcctcactacgccgccgggccaagctcttctctctcagctgagggacgaggacggcgtggttgcggtgtgggttgactttgagaaatttcggaaagagtgtgaagttgaggagttttatgaagcgttggaggagaagccgaaggtaaccctactgtgcatgagtattgcagtgcacaaggttctgttgactcaatgggaaagtgatagaatggaggatgatatccgagttaatattcggttgcataactacccggaatcgatgattgctttgaagaacttaaaagctgcttatatagacaagcttgtatctgtgcgcggtagtgtagtaaaagttagcactgtgaggccttttgtggttcaaatggattttgactgtgttaagtgtaagacgagcattacgtgtatgttccctgatgggaagttttccccaccattgaaatgtgatctacatgggtgcaagagcagaacttttattccaaatcgatctactgctcaaacgatagattttcaaaagataaggatacaggagctgctgaagcctgaggatcatgaagaaggacgggtgcctcgaacagtagaatgtgaacttcttgaagatcttgttgatgcatgcatccctggagatgtggtgactgtcactgggataataagagtcattaacaattacatggacattgggggaggaaaatcgaaaggcaaaagtcagggaatttactatttgtatctagaagctgtttcaattaaaaactccaagtcgcagtctatgcctgaaggtgtacaagattctagttctaatgctgggtctttagcacttgttgactcattttccccaagggatttggaattcattgtcaagttctcggaggaacatggtccagataccttccggcaactaatccaatctatctgtccatccatctatggtcatgagcttgttaaaggtgatcctggactaggaaagagccaaatacttcaagcagcagcagctgtttctccgcgaggcatttatgtatgtggtaatgccacaaccagagctgggctcactgtagctgttgtaaaggattctatgacaagtgattatgcgtttgaagcagatagtggtttgtgctgcattgacgagttcgacaaaatgacttcagagcatcaggccctactggaagccatggaacaacagtgtgtgtctattgcaaaggctggattagtggcaagtctgtcagcacgaacttctgtcttagcagcagcaaaccctgttggtggtcattataagacatggatgtctatcatgcagcttcatactggatatggagagcattcgccagctgcaaaaaagattcgtagagaaaatgcagcatcacaaagtgcagaaggcatagatatgagcggaggtcgttctttgatttcaaggttgaggcttgacccaaagaaggatgctgattttgttccattacccatgcaacttcttcgcaagtatattgcttatgcaaaaacgtttgtctttccaaggatgtcaaagctggcagcagaaatcctgcagaaattttacttgaaactgagagaccatgctacatctgctgatagcacaccaataacagcaaggcaactggagagtctggtgaggctgacagaagctcgagctaggttagatttaagggaagaaattacagcccaagatgcaacggaagtggttgaaatcatgagagaatccttgtatgacaagtacattgatgagcatggtgttgtggattttggtcggagtggagggatgagtcaacaaaaagaagcgaagcggtttttaagtgcccttaataagcaatcagagttgcaccagaaagacactttctcaatttctgaaatatacagtttggcagataggattggcctaagagttccagacattgacacattcgttgataacttaaacagtgttggctatctactcaagaagggggggaagacataccaggagtcaatcatcatcaaggtgaagaggctgaggttcgggtag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000280 GO:0000724 GO:0000725 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007140 GO:0007143 GO:0007275 GO:0007276 GO:0007292 GO:0008150 GO:0008152 GO:0009555 GO:0009987 GO:0016043 GO:0019953 GO:0022402 GO:0022412 GO:0022414 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032504 GO:0032991 GO:0033554 GO:0034641 GO:0042555 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0044703 GO:0046483 GO:0048229 GO:0048232 GO:0048285 GO:0048609 GO:0048856 GO:0050896 GO:0051321 GO:0051704 GO:0051716 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0097362 GO:0140013 GO:1901360 GO:1903046

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MCM MCM_OB

Protein Analysis

717

Amino Acids

79.55

Weight (kDa)

6.19

Isoelectric Point (pI)

45.17

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013292)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G09660 AT3G09660 AT3G09660
fragaria_vesca	FvH4_6g15280 FvH4_6g15280
malus_domestica	MD04G1104500.v1.1
prunus_persica	Prupe.6G241500_v2.0.a1 Prupe.6G241500_v2.0.a1
pyrus_communis	pycom04g09950
rosa_chinensis	RchiOBHm_Chr3g0468711
rosa_laevigata	RLG00000024414
rosa_multiflora	Rmu_sc0011538.1_g000001
rosa_roxburghii	Rroxscaffold_6G00412640
rosa_rugosa	Rorug03G0096200
rosa_samantha	Rh3AG145200 Rh3BG167800 Rh3DG166500
rosa_wichuraiana	Rw3G013700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1413
AasI	GACNNNNNNGTC	1 cut(s)	1423
AccB1I	GGYRCC	1 cut(s)	712
AccBSI	CCGCTC	1 cut(s)	1530
AccII	CGCG	4 cut(s)	11, 80, 465, 1147
AciI	CCGC	9 cut(s)	11, 14, 78, 161, 212, 465, 1145, 1530, 1936
AclI	AACGTT	1 cut(s)	1637
AclWI	GGATC	2 cut(s)	702, 1088
AcsI	RAATTY	4 cut(s)	233, 858, 992, 1685
AcuI	CTGAAG	3 cut(s)	704, 939, 1269
AdeI	CACNNNGTG	1 cut(s)	1508
AfaI	GTAC	4 cut(s)	5, 83, 927, 1868
AfiI	CCNNNNNNNGG	4 cut(s)	1103, 1185, 1403, 1573
AflIII	ACRYGT	1 cut(s)	548
AjnI	CCWGG	4 cut(s)	116, 766, 1096, 2109
AloI	GAACNNNNNNTCC	2 cut(s)	607, 639
Alw21I	GWGCWC	3 cut(s)	32, 102, 324
Alw26I	GTCTC	1 cut(s)	1698
Alw44I	GTGCAC	1 cut(s)	320
AlwI	GGATC	2 cut(s)	702, 1088
AlwNI	CAGNNNCTG	2 cut(s)	679, 1136
Ama87I	CYCGRG	2 cut(s)	31, 1779
AoxI	GGCC	6 cut(s)	75, 87, 166, 494, 1296, 2026
ApaLI	GTGCAC	1 cut(s)	320
ApoI	RAATTY	4 cut(s)	233, 858, 992, 1685
AspLEI	GCGC	2 cut(s)	11, 465
AspS9I	GGNCC	5 cut(s)	75, 88, 166, 1022, 1297
AsuC2I	CCSGG	2 cut(s)	165, 401
AsuHPI	GGTGA	4 cut(s)	790, 1103, 1774, 2143
AvaI	CYCGRG	2 cut(s)	31, 1779
AvaII	GGWCC	1 cut(s)	1022
AxyI	CCTNAGG	1 cut(s)	690
BaeGI	GKGCMC	3 cut(s)	26, 324, 1951
BanI	GGYRCC	1 cut(s)	712
BanII	GRGCYC	4 cut(s)	32, 63, 102, 1191
BauI	CACGAG	1 cut(s)	25
BbsI	GAAGAC	1 cut(s)	2108
Bbv12I	GWGCWC	3 cut(s)	32, 102, 324
BbvCI	CCTCAGC	2 cut(s)	188, 2141
BccI	CCATC	3 cut(s)	557, 1069, 1073
BceAI	ACGGC	3 cut(s)	22, 55, 217
BcgI	CGANNNNNNTGC	2 cut(s)	1592, 1626
BciT130I	CCWGG	4 cut(s)	118, 768, 1098, 2111
BciVI	GTATCC	1 cut(s)	663
BcnI	CCSGG	2 cut(s)	165, 401
BcoDI	GTCTC	1 cut(s)	1698
BfaI	CTAG	4 cut(s)	875, 936, 1103, 1785
BfmI	CTRYAG	2 cut(s)	1194, 1679
BfuI	GTATCC	1 cut(s)	663
BglII	AGATCT	2 cut(s)	69, 745
BlpI	GCTNAGC	1 cut(s)	62
Bme1390I	CCNGG	6 cut(s)	118, 165, 401, 768, 1098, 2111
Bme18I	GGWCC	1 cut(s)	1022
BmeT110I	CYCGRG	2 cut(s)	31, 1779
BmgT120I	GGNCC	5 cut(s)	75, 88, 166, 1022, 1297
BmiI	GGNNCC	1 cut(s)	714
BmrFI	CCNGG	6 cut(s)	118, 165, 401, 768, 1098, 2111
BmrI	ACTGGG	1 cut(s)	798
BmsI	GCATC	6 cut(s)	745, 771, 1300, 1508, 1567, 1810
BmuI	ACTGGG	1 cut(s)	798
BpiI	GAAGAC	1 cut(s)	2108
BplI	GAGNNNNNCTC	2 cut(s)	1173, 1205
BpmI	CTGGAG	2 cut(s)	789, 1772
Bpu10I	CCTNAGC	2 cut(s)	188, 2141
Bpu1102I	GCTNAGC	1 cut(s)	62
BpuEI	CTTGAG	1 cut(s)	2072
BpuMI	CCSGG	2 cut(s)	165, 401
Bsa29I	ATCGAT	2 cut(s)	407, 631
BsaAI	YACGTR	1 cut(s)	549
BsaBI	GATNNNNATC	1 cut(s)	1427
BsaI	GGTCTC	1 cut(s)	1698
BsaJI	CCNNGG	5 cut(s)	116, 766, 980, 1311, 1649
BsaXI	ACNNNNNCTCC	2 cut(s)	762, 792
Bsc4I	CCNNNNNNNGG	4 cut(s)	1103, 1185, 1403, 1573
Bse1I	ACTGG	4 cut(s)	793, 1308, 1450, 1755
Bse21I	CCTNAGG	1 cut(s)	690
Bse8I	GATNNNNATC	1 cut(s)	1427
BseBI	CCWGG	4 cut(s)	118, 768, 1098, 2111
BseCI	ATCGAT	2 cut(s)	407, 631
BseDI	CCNNGG	5 cut(s)	116, 766, 980, 1311, 1649
BseGI	GGATG	7 cut(s)	370, 762, 1061, 1428, 1582, 1659, 1917
BseJI	GATNNNNATC	1 cut(s)	1427
BseLI	CCNNNNNNNGG	4 cut(s)	1103, 1185, 1403, 1573
BseMII	CTCAG	6 cut(s)	76, 179, 197, 681, 1691, 2132
BseNI	ACTGG	4 cut(s)	793, 1308, 1450, 1755
BseRI	GAGGAG	2 cut(s)	272, 293
BseSI	GKGCMC	3 cut(s)	26, 324, 1951
BseYI	CCCAGC	2 cut(s)	947, 1184
BsgI	GTGCAG	1 cut(s)	1530
Bsh1236I	CGCG	4 cut(s)	11, 80, 465, 1147
BshFI	GGCC	6 cut(s)	77, 89, 168, 496, 1298, 2028
BshNI	GGYRCC	1 cut(s)	712
BshVI	ATCGAT	2 cut(s)	407, 631
BsiHKAI	GWGCWC	3 cut(s)	32, 102, 324
BsiHKCI	CYCGRG	2 cut(s)	31, 1779
BsiSI	CCGG	3 cut(s)	164, 401, 1036
BslFI	GGGAC	1 cut(s)	206
BslI	CCNNNNNNNGG	4 cut(s)	1103, 1185, 1403, 1573
BsmAI	GTCTC	1 cut(s)	1698
BsmFI	GGGAC	1 cut(s)	206
BsmI	GAATGC	1 cut(s)	1459
BsnI	GGCC	6 cut(s)	77, 89, 168, 496, 1298, 2028
Bso31I	GGTCTC	1 cut(s)	1698
BsoBI	CYCGRG	2 cut(s)	31, 1779
Bsp1286I	GDGCHC	7 cut(s)	26, 32, 63, 102, 324, 1191, 1951
Bsp1407I	TGTACA	1 cut(s)	925
Bsp143I	GATC	6 cut(s)	69, 592, 632, 694, 745, 1093
Bsp1720I	GCTNAGC	1 cut(s)	62
Bsp19I	CCATGG	1 cut(s)	1311
BspACI	CCGC	9 cut(s)	11, 14, 78, 161, 212, 465, 1145, 1530, 1936
BspANI	GGCC	6 cut(s)	77, 89, 168, 496, 1298, 2028
BspCNI	CTCAG	6 cut(s)	75, 180, 196, 682, 1692, 2133
BspDI	ATCGAT	2 cut(s)	407, 631
BspFNI	CGCG	4 cut(s)	11, 80, 465, 1147
BspHI	TCATGA	3 cut(s)	697, 1075, 1842
BspLI	GGNNCC	1 cut(s)	714
BspMAI	CTGCAG	1 cut(s)	1683
BspPI	GGATC	2 cut(s)	702, 1088
BspQI	GCTCTTC	1 cut(s)	180
BspT107I	GGYRCC	1 cut(s)	712
BspTNI	GGTCTC	1 cut(s)	1698
BsrBI	CCGCTC	1 cut(s)	1530
BsrGI	TGTACA	1 cut(s)	925
BsrI	ACTGG	4 cut(s)	793, 1308, 1450, 1755
BssECI	CCNNGG	5 cut(s)	116, 766, 980, 1311, 1649
BssMI	GATC	6 cut(s)	69, 592, 632, 694, 745, 1093
BssSI	CACGAG	1 cut(s)	25
BssT1I	CCWWGG	3 cut(s)	980, 1311, 1649
Bst2BI	CACGAG	1 cut(s)	25
Bst2UI	CCWGG	4 cut(s)	118, 768, 1098, 2111
Bst4CI	ACNGT	9 cut(s)	303, 490, 524, 724, 784, 1195, 1323, 2009, 2072
Bst6I	CTCTTC	2 cut(s)	180, 2129
BstAPI	GCANNNNNTGC	1 cut(s)	913
BstAUI	TGTACA	1 cut(s)	925
BstBAI	YACGTR	1 cut(s)	549
BstC8I	GCNNGC	3 cut(s)	760, 1467, 1665
BstDEI	CTNAG	8 cut(s)	62, 183, 188, 690, 1381, 1700, 2030, 2141
BstDSI	CCRYGG	1 cut(s)	1311
BstEII	GGTNACC	1 cut(s)	292
BstENI	CCTNNNNNAGG	1 cut(s)	1101
BstF5I	GGATG	7 cut(s)	370, 762, 1061, 1428, 1582, 1659, 1917
BstFNI	CGCG	4 cut(s)	11, 80, 465, 1147
BstHHI	GCGC	2 cut(s)	11, 465
BstKTI	GATC	6 cut(s)	72, 595, 635, 697, 748, 1096
BstMAI	GTCTC	1 cut(s)	1698
BstMBI	GATC	6 cut(s)	69, 592, 632, 694, 745, 1093
BstMWI	GCNNNNNNNGC	7 cut(s)	86, 685, 913, 1133, 1238, 1718, 1820
BstNI	CCWGG	4 cut(s)	118, 768, 1098, 2111
BstNSI	RCATGY	1 cut(s)	762
BstPI	GGTNACC	1 cut(s)	292
BstSCI	CCNGG	6 cut(s)	116, 163, 399, 766, 1096, 2109
BstSFI	CTRYAG	2 cut(s)	1194, 1679
BstSLI	GKGCMC	3 cut(s)	26, 324, 1951
BstUI	CGCG	4 cut(s)	11, 80, 465, 1147
BstV2I	GAAGAC	1 cut(s)	2108
BstX2I	RGATCY	2 cut(s)	69, 745
BstYI	RGATCY	2 cut(s)	69, 745
Bsu15I	ATCGAT	2 cut(s)	407, 631
Bsu36I	CCTNAGG	1 cut(s)	690
BsuI	GTATCC	1 cut(s)	663
BsuRI	GGCC	6 cut(s)	77, 89, 168, 496, 1298, 2028
BsuTUI	ATCGAT	2 cut(s)	407, 631
BtgI	CCRYGG	1 cut(s)	1311
BtsCI	GGATG	7 cut(s)	370, 762, 1061, 1428, 1582, 1659, 1917
BtsI	GCAGTG	1 cut(s)	324
BtsIMutI	CAGTG	6 cut(s)	324, 486, 786, 1191, 1328, 2077
Cac8I	GCNNGC	3 cut(s)	760, 1467, 1665
CaiI	CAGNNNCTG	2 cut(s)	679, 1136
CciI	TCATGA	3 cut(s)	697, 1075, 1842
CfoI	GCGC	2 cut(s)	11, 465
Cfr13I	GGNCC	5 cut(s)	75, 88, 166, 1022, 1297
ClaI	ATCGAT	2 cut(s)	407, 631
Csp6I	GTAC	4 cut(s)	4, 82, 926, 1867
CspCI	CAANNNNNGTGG	2 cut(s)	1812, 1847
CviQI	GTAC	4 cut(s)	4, 82, 926, 1867
DdeI	CTNAG	8 cut(s)	62, 183, 188, 690, 1381, 1700, 2030, 2141
DpnI	GATC	6 cut(s)	71, 594, 634, 696, 747, 1095
DpnII	GATC	6 cut(s)	69, 592, 632, 694, 745, 1093
DraIII	CACNNNGTG	1 cut(s)	1508
DrdI	GACNNNNNNGTC	1 cut(s)	1423
DseDI	GACNNNNNNGTC	1 cut(s)	1423
Eam1104I	CTCTTC	2 cut(s)	180, 2129
EarI	CTCTTC	2 cut(s)	180, 2129
Ecl136II	GAGCTC	2 cut(s)	30, 100
Eco130I	CCWWGG	3 cut(s)	980, 1311, 1649
Eco147I	AGGCCT	1 cut(s)	496
Eco24I	GRGCYC	4 cut(s)	32, 63, 102, 1191
Eco31I	GGTCTC	1 cut(s)	1698
Eco32I	GATATC	1 cut(s)	370
Eco47I	GGWCC	1 cut(s)	1022
Eco53kI	GAGCTC	2 cut(s)	30, 100
Eco57I	CTGAAG	3 cut(s)	704, 939, 1269
Eco81I	CCTNAGG	1 cut(s)	690
Eco88I	CYCGRG	2 cut(s)	31, 1779
Eco91I	GGTNACC	1 cut(s)	292
EcoICRI	GAGCTC	2 cut(s)	30, 100
EcoNI	CCTNNNNNAGG	1 cut(s)	1101
EcoO109I	RGGNCCY	1 cut(s)	1297
EcoO65I	GGTNACC	1 cut(s)	292
EcoRI	GAATTC	1 cut(s)	992
EcoRII	CCWGG	4 cut(s)	116, 766, 1096, 2109
EcoRV	GATATC	1 cut(s)	370
EcoT14I	CCWWGG	3 cut(s)	980, 1311, 1649
EcoT22I	ATGCAT	2 cut(s)	760, 764
EcoT38I	GRGCYC	4 cut(s)	32, 63, 102, 1191
ErhI	CCWWGG	3 cut(s)	980, 1311, 1649
FaqI	GGGAC	1 cut(s)	206
FauI	CCCGC	1 cut(s)	7
FokI	GGATG	7 cut(s)	377, 749, 1048, 1435, 1589, 1666, 1924
FriOI	GRGCYC	4 cut(s)	32, 63, 102, 1191
FspBI	CTAG	4 cut(s)	875, 936, 1103, 1785
GlaI	GCGC	2 cut(s)	10, 464
GsaI	CCCAGC	2 cut(s)	951, 1188
GsuI	CTGGAG	2 cut(s)	789, 1772
HaeIII	GGCC	6 cut(s)	77, 89, 168, 496, 1298, 2028
HapII	CCGG	3 cut(s)	164, 401, 1036
HhaI	GCGC	2 cut(s)	11, 465
Hin6I	GCGC	2 cut(s)	9, 463
HinP1I	GCGC	2 cut(s)	9, 463
HincII	GTYRAC	4 cut(s)	223, 336, 967, 1919
HindII	GTYRAC	4 cut(s)	223, 336, 967, 1919
HindIII	AAGCTT	1 cut(s)	449
HpaII	CCGG	3 cut(s)	164, 401, 1036
HphI	GGTGA	4 cut(s)	790, 1103, 1774, 2143
Hpy166II	GTNNAC	7 cut(s)	223, 322, 336, 734, 926, 967, 1919
Hpy188I	TCNGA	7 cut(s)	240, 374, 1012, 1288, 1902, 1966, 1999
Hpy188III	TCNNGA	8 cut(s)	698, 740, 875, 1025, 1076, 1843, 2039, 2089
Hpy8I	GTNNAC	7 cut(s)	223, 322, 336, 734, 926, 967, 1919
Hpy99I	CGWCG	1 cut(s)	110
HpyAV	CCTTC	8 cut(s)	13, 283, 698, 914, 1042, 1508, 1567, 2086
HpyCH4III	ACNGT	9 cut(s)	303, 490, 524, 724, 784, 1195, 1323, 2009, 2072
HpyCH4IV	ACGT	2 cut(s)	548, 1637
HpyF10VI	GCNNNNNNNGC	7 cut(s)	86, 685, 913, 1133, 1238, 1718, 1820
HpyF3I	CTNAG	8 cut(s)	62, 183, 188, 690, 1381, 1700, 2030, 2141
HpySE526I	ACGT	2 cut(s)	548, 1637
HspAI	GCGC	2 cut(s)	9, 463
Kzo9I	GATC	6 cut(s)	69, 592, 632, 694, 745, 1093
LguI	GCTCTTC	1 cut(s)	180
LmnI	GCTCC	2 cut(s)	140, 676
LweI	GCATC	6 cut(s)	745, 771, 1300, 1508, 1567, 1810
MaeI	CTAG	4 cut(s)	875, 936, 1103, 1785
MaeII	ACGT	2 cut(s)	548, 1637
MaeIII	GTNAC	3 cut(s)	292, 778, 784
MalI	GATC	6 cut(s)	71, 594, 634, 696, 747, 1095
MbiI	CCGCTC	1 cut(s)	1530
MboI	GATC	6 cut(s)	69, 592, 632, 694, 745, 1093
MboII	GAAGA	8 cut(s)	167, 433, 713, 755, 1601, 1814, 2113, 2146
MflI	RGATCY	2 cut(s)	69, 745
MhlI	GDGCHC	7 cut(s)	26, 32, 63, 102, 324, 1191, 1951
MluCI	AATT	8 cut(s)	233, 811, 858, 888, 992, 1685, 1806, 1992
MlyI	GAGTC	6 cut(s)	331, 810, 962, 1765, 1924, 2123
MmeI	TCCRAC	2 cut(s)	255, 1880
Mph1103I	ATGCAT	2 cut(s)	760, 764
MslI	CAYNNNNRTG	3 cut(s)	586, 1523, 2129
MspA1I	CMGCKG	3 cut(s)	187, 1136, 1469
MspI	CCGG	3 cut(s)	164, 401, 1036
MspR9I	CCNGG	6 cut(s)	118, 165, 401, 768, 1098, 2111
Mva1269I	GAATGC	1 cut(s)	1459
MvaI	CCWGG	4 cut(s)	118, 768, 1098, 2111
MvnI	CGCG	4 cut(s)	11, 80, 465, 1147
MwoI	GCNNNNNNNGC	7 cut(s)	86, 685, 913, 1133, 1238, 1718, 1820
NciI	CCSGG	2 cut(s)	165, 401
NcoI	CCATGG	1 cut(s)	1311
NdeII	GATC	6 cut(s)	69, 592, 632, 694, 745, 1093
NlaIV	GGNNCC	1 cut(s)	714
NmeAIII	GCCGAG	1 cut(s)	81
NmuCI	GTSAC	2 cut(s)	778, 784
NsiI	ATGCAT	2 cut(s)	760, 764
NspI	RCATGY	1 cut(s)	762
PaeI	GCATGC	1 cut(s)	762
PaeR7I	CTCGAG	2 cut(s)	31, 1779
PagI	TCATGA	3 cut(s)	697, 1075, 1842
PceI	AGGCCT	1 cut(s)	496
PciSI	GCTCTTC	1 cut(s)	180
PcsI	WCGNNNNNNNCGW	4 cut(s)	102, 201, 545, 715
PctI	GAATGC	1 cut(s)	1459
PfeI	GAWTC	6 cut(s)	44, 404, 932, 1211, 1480, 1850
PfoI	TCCNGGA	1 cut(s)	1096
PleI	GAGTC	6 cut(s)	331, 809, 962, 1764, 1923, 2122
PpsI	GAGTC	6 cut(s)	331, 809, 962, 1764, 1923, 2122
Ppu21I	YACGTR	1 cut(s)	549
PsiI	TTATAA	1 cut(s)	1413
Psp124BI	GAGCTC	2 cut(s)	32, 102
Psp1406I	AACGTT	1 cut(s)	1637
Psp6I	CCWGG	4 cut(s)	116, 766, 1096, 2109
PspEI	GGTNACC	1 cut(s)	292
PspFI	CCCAGC	2 cut(s)	947, 1184
PspGI	CCWGG	4 cut(s)	116, 766, 1096, 2109
PspN4I	GGNNCC	1 cut(s)	714
PspPI	GGNCC	5 cut(s)	75, 88, 166, 1022, 1297
PspXI	VCTCGAGB	2 cut(s)	31, 1779
PstI	CTGCAG	1 cut(s)	1683
PstNI	CAGNNNCTG	2 cut(s)	679, 1136
PsuI	RGATCY	2 cut(s)	69, 745
PvuII	CAGCTG	3 cut(s)	187, 1136, 1469
RsaI	GTAC	4 cut(s)	5, 83, 927, 1868
RsaNI	GTAC	4 cut(s)	4, 82, 926, 1867
RseI	CAYNNNNRTG	3 cut(s)	586, 1523, 2129
SacI	GAGCTC	2 cut(s)	32, 102
SapI	GCTCTTC	1 cut(s)	180
Sau3AI	GATC	6 cut(s)	69, 592, 632, 694, 745, 1093
Sau96I	GGNCC	5 cut(s)	75, 88, 166, 1022, 1297
SchI	GAGTC	6 cut(s)	331, 810, 962, 1765, 1924, 2123
ScrFI	CCNGG	6 cut(s)	118, 165, 401, 768, 1098, 2111
SduI	GDGCHC	7 cut(s)	26, 32, 63, 102, 324, 1191, 1951
SfaNI	GCATC	6 cut(s)	745, 771, 1300, 1508, 1567, 1810
SfcI	CTRYAG	2 cut(s)	1194, 1679
Sfr274I	CTCGAG	2 cut(s)	31, 1779
SinI	GGWCC	1 cut(s)	1022
SlaI	CTCGAG	2 cut(s)	31, 1779
SmiMI	CAYNNNNRTG	3 cut(s)	586, 1523, 2129
SmlI	CTYRAG	3 cut(s)	31, 1779, 2087
SmoI	CTYRAG	3 cut(s)	31, 1779, 2087
SphI	GCATGC	1 cut(s)	762
Sse9I	AATT	8 cut(s)	233, 811, 858, 888, 992, 1685, 1806, 1992
SseBI	AGGCCT	1 cut(s)	496
SsiI	CCGC	9 cut(s)	11, 14, 78, 161, 212, 465, 1145, 1530, 1936
SspI	AATATT	1 cut(s)	382
SspMI	CTAG	4 cut(s)	875, 936, 1103, 1785
SstI	GAGCTC	2 cut(s)	32, 102
StuI	AGGCCT	1 cut(s)	496
StyD4I	CCNGG	6 cut(s)	116, 163, 399, 766, 1096, 2109
StyI	CCWWGG	3 cut(s)	980, 1311, 1649
TaaI	ACNGT	9 cut(s)	303, 490, 524, 724, 784, 1195, 1323, 2009, 2072
TaiI	ACGT	2 cut(s)	551, 1640
TaqI	TCGA	8 cut(s)	32, 96, 407, 631, 718, 839, 1272, 1780
TasI	AATT	8 cut(s)	233, 811, 858, 888, 992, 1685, 1806, 1992
TatI	WGTACW	2 cut(s)	925, 1866
TauI	GCSGC	3 cut(s)	14, 80, 163
TfiI	GAWTC	6 cut(s)	44, 404, 932, 1211, 1480, 1850
TscAI	CASTG	6 cut(s)	324, 493, 793, 1198, 1328, 2077
TseFI	GTSAC	2 cut(s)	778, 784
Tsp45I	GTSAC	2 cut(s)	778, 784
TspDTI	ATGAA	5 cut(s)	36, 282, 714, 985, 1430
TspGWI	ACGGA	1 cut(s)	1841
TspRI	CASTG	6 cut(s)	324, 493, 793, 1198, 1328, 2077
VneI	GTGCAC	1 cut(s)	320
VpaK11BI	GGWCC	1 cut(s)	1022
XagI	CCTNNNNNAGG	1 cut(s)	1101
XapI	RAATTY	4 cut(s)	233, 858, 992, 1685
XbaI	TCTAGA	1 cut(s)	874
XceI	RCATGY	1 cut(s)	762
XhoI	CTCGAG	2 cut(s)	31, 1779
XspI	CTAG	4 cut(s)	875, 936, 1103, 1785
Zsp2I	ATGCAT	2 cut(s)	760, 764

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.