AT3G12770

DYW family of nucleic acid deaminases

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0017162
Physical Location & Seq
Reverse (-)
4056953 .. 4059284
2332 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G12770.1

Sequence Viewer

Length: 2085 bp
ATGTCGGAAGCATCTTGTCTTGCTTCTCCTTTGCTCTACACCAATTCTGGAATCCATTCTGATTCTTTCTACGCTTCGCTTATTGATAGTGCCACTCATAAAGCTCAGCTGAAGCAAATCCACGCACGTTTACTTGTTTTAGGTTTGCAGTTCAGTGGTTTCTTGATCACCAAGCTCATTCACGCTAGCTCTTCCTTTGGTGACATTACTTTTGCACGCCAAGTGTTCGACGATTTACCTCGTCCTCAAATATTCCCTTGGAATGCTATAATCAGGGGTTATTCAAGGAACAATCACTTCCAAGATGCTCTTCTCATGTATTCCAATATGCAACTCGCTCGTGTTTCTCCTGATTCTTTCACTTTCCCTCATCTTCTTAAAGCTTGCAGCGGTTTGTCTCATCTTCAGATGGGTAGATTCGTTCATGCTCAGGTGTTCAGGCTTGGATTTGATGCGGATGTGTTTGTTCAGAACGGTCTCATTGCCTTGTATGCGAAATGTAGGCGTTTGGGATCTGCGAGAACTGTGTTTGAAGGACTGCCATTGCCAGAGAGGACGATAGTCTCATGGACTGCTATCGTTTCAGCTTATGCTCAGAACGGTGAGCCTATGGAGGCTCTTGAGATTTTTAGTCAGATGAGGAAGATGGATGTGAAGCCTGACTGGGTAGCTCTTGTCAGCGTTCTCAATGCTTTCACTTGCTTGCAGGATTTGAAGCAAGGGAGATCTATTCATGCTTCTGTTGTGAAGATGGGTCTTGAAATAGAGCCTGACTTACTCATCTCTCTCAACACCATGTATGCAAAATGTGGCCAAGTTGCAACTGCCAAGATTCTGTTTGATAAGATGAAGTCACCTAACCTGATTTTGTGGAACGCCATGATCTCTGGCTATGCGAAGAACGGTTATGCCAGGGAAGCTATTGATATGTTTCATGAGATGATCAATAAAGATGTTAGACCCGACACCATCTCTATAACATCTGCCATTTCGGCTTGCGCTCAAGTAGGTTCTCTTGAGCAGGCTCGCAGTATGTATGAATATGTAGGCAGAAGTGACTACAGGGATGACGTTTTCATAAGCAGCGCATTAATCGATATGTTTGCTAAATGTGGAAGTGTAGAAGGCGCAAGGTTGGTTTTTGACCGAACACTTGACAGGGATGTTGTGGTGTGGAGTGCTATGATTGTTGGGTATGGATTGCACGGGCGGGCAAGAGAAGCAATCAGTCTGTACCGTGCAATGGAGCGTGGTGGAGTACATCCCAATGACGTCACTTTTCTGGGGCTTCTCATGGCCTGTAACCATTCAGGCATGGTAAGAGAAGGCTGGTGGTTTTTCAACCGGATGGCGGATCACAAAATAAATCCACAACAGCAACATTATGCATGTGTCATTGATCTTCTCGGGCGTGCTGGTCATCTGGATCAAGCTTATGAAGTGATCAAATGCATGCCGGTCCAGCCCGGTGTAACGGTTTGGGGAGCACTCCTAAGCGCTTGCAAGAAGCATCGCCACGTTGAACTGGGAGAATATGCAGCTCAACAGCTTTTCTCAATAGACCCATCCAACACAGGCCACTATGTACAGCTCTCTAATCTGTATGCTGCAGCACGTTTGTGGGACCGTGTTGCAGAGGTGCGAGTGAGAATGAAGGAGAAAGGATTGAACAAAGACGTTGGATGTAGCTGGGTTGAAGTAAGGGGAAGGTTGGAGGCTTTCCGAGTGGGTGATAAGTCACATCCGAGATATGAAGAGATAGAGAGACAAGTAGAGTGGATAGAGAGTAGATTGAAGGAAGGTGGATTTGTGGCTAACAAGGATGCTTCATTGCACGATCTCAACGATGAAGAAGCTGAAGAGACTTTGTGCAGCCACAGCGAGAGGATCGCGATTGCGTATGGGCTTATAAGTACACCCCAAGGCACACCACTGCGGATCACAAAGAATCTGAGAGCATGCGTAAACTGTCATGCTGCTACAAAGCTTATCTCGAAGCTAGTGGACAGAGAGATTGTTGTGAGAGATACAAATAGGTTCCACCATTTTAAGGATGGAGTTTGTTCCTGTGGTGATTATTGGTAA

Protein Analysis

694

Amino Acids

77.93

Weight (kDa)

7.85

Isoelectric Point (pI)

40.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 82 - 129 1.6e-09 PPR repeat family
PPR_2 PF13041 186 - 232 1.3e-08 PPR repeat family
PPR PF01535 188 - 217 3.3e-07 PPR repeat
PPR_1 PF12854 285 - 314 3.5e-06 PPR repeat
PPR_2 PF13041 286 - 334 5.3e-12 PPR repeat family
PPR PF01535 290 - 318 4.3e-09 PPR repeat
PPR_2 PF13041 387 - 434 5.5e-09 PPR repeat family
E_motif PF20431 504 - 566 5e-19 E motif
DYW_deaminase PF14432 602 - 694 3.9e-41 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0017162)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G12770
fragaria_vesca FvH4_6g08230
malus_domestica MD09G1101900.v1.1
prunus_persica Prupe.3G223800_v2.0.a1
pyrus_communis pycom09g02560
rosa_chinensis RchiOBHm_Chr3g0458151
rosa_multiflora Rmu_co8353983.1_g000001
rosa_roxburghii Rroxscaffold_6G00421260
rosa_rugosa Rorug03G0025100
rosa_samantha Rh3AG085800 Rh3BG088500 Rh3DG089500
rosa_wichuraiana Rw3G007290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1910
AatII GACGTC 1 cut(s) 1275
AccII CGCG 1 cut(s) 1892
AciI CCGC 5 cut(s) 390, 455, 1210, 1352, 1936
AclWI GGATC 5 cut(s) 520, 1362, 1434, 1895, 1946
AcoI YGGCCR 1 cut(s) 811
AcuI CTGAAG 3 cut(s) 131, 389, 1878
AcyI GRCGYC 1 cut(s) 1272
AfaI GTAC 4 cut(s) 1235, 1260, 1587, 1915
AfeI AGCGCT 1 cut(s) 1498
AfiI CCNNNNNNNGG 3 cut(s) 1243, 1351, 2050
AgsI TTSAA 9 cut(s) 285, 533, 715, 761, 1342, 1523, 1669, 1697, 1795
AjnI CCWGG 1 cut(s) 911
AjuI GAANNNNNNNTTGG 2 cut(s) 294, 326
AleI CACNNNNGTG 1 cut(s) 1618
Alw21I GWGCWC 1 cut(s) 1489
Alw26I GTCTC 5 cut(s) 402, 482, 568, 1759, 1856
AlwI GGATC 5 cut(s) 520, 1362, 1434, 1895, 1946
Ama87I CYCGRG 1 cut(s) 1406
Aor51HI AGCGCT 1 cut(s) 1498
AoxI GGCC 3 cut(s) 811, 1296, 1576
ApeKI GCWGC 7 cut(s) 387, 1083, 1538, 1607, 1610, 1872, 1976
ArsI GACNNNNNNTTYG 2 cut(s) 194, 226
AseI ATTAAT 1 cut(s) 1091
Asp700I GAANNNNTTC 1 cut(s) 55
AspLEI GCGC 4 cut(s) 1001, 1088, 1130, 1499
AspS9I GGNCC 2 cut(s) 1459, 1624
AsuC2I CCSGG 1 cut(s) 1467
AsuHPI GGTGA 6 cut(s) 160, 212, 614, 846, 1742, 2084
AsuNHI GCTAGC 1 cut(s) 185
AvaI CYCGRG 1 cut(s) 1406
AvaII GGWCC 2 cut(s) 1459, 1624
BalI TGGCCA 1 cut(s) 813
BauI CACGAG 1 cut(s) 339
Bbv12I GWGCWC 1 cut(s) 1489
BbvI GCAGC 7 cut(s) 399, 1095, 1550, 1594, 1622, 1884, 1963
BccI CCATC 7 cut(s) 403, 640, 745, 977, 1342, 1573, 2048
BcgI CGANNNNNNTGC 4 cut(s) 320, 354, 1085, 1119
BciT130I CCWGG 1 cut(s) 913
BclI TGATCA 3 cut(s) 165, 942, 1443
BcnI CCSGG 1 cut(s) 1467
BcoDI GTCTC 5 cut(s) 402, 482, 568, 1759, 1856
BfaI CTAG 2 cut(s) 186, 2000
BfmI CTRYAG 2 cut(s) 1060, 1608
BfoI RGCGCY 1 cut(s) 1500
BglI GCCNNNNNGGC 1 cut(s) 992
BglII AGATCT 1 cut(s) 725
BisI GCNGC 7 cut(s) 388, 1084, 1539, 1608, 1611, 1873, 1977
BlpI GCTNAGC 1 cut(s) 105
BlsI GCNGC 7 cut(s) 389, 1085, 1540, 1609, 1612, 1874, 1978
Bme1390I CCNGG 2 cut(s) 913, 1467
Bme18I GGWCC 2 cut(s) 1459, 1624
BmeT110I CYCGRG 1 cut(s) 1406
BmgT120I GGNCC 2 cut(s) 1459, 1624
BmiI GGNNCC 2 cut(s) 1625, 2039
BmrFI CCNGG 2 cut(s) 913, 1467
BmrI ACTGGG 2 cut(s) 673, 1535
BmsI GCATC 5 cut(s) 20, 295, 442, 1519, 1813
BmtI GCTAGC 1 cut(s) 189
BmuI ACTGGG 2 cut(s) 673, 1535
BoxI GACNNNNGTC 1 cut(s) 560
Bpu10I CCTNAGC 2 cut(s) 429, 1493
Bpu1102I GCTNAGC 1 cut(s) 105
BpuEI CTTGAG 3 cut(s) 641, 987, 1037
BpuMI CCSGG 1 cut(s) 1467
Bsa29I ATCGAT 1 cut(s) 1095
BsaHI GRCGYC 1 cut(s) 1272
BsaI GGTCTC 1 cut(s) 482
BsaJI CCNNGG 3 cut(s) 257, 912, 1921
BsaWI WCCGGW 1 cut(s) 1344
Bsc4I CCNNNNNNNGG 3 cut(s) 1243, 1351, 2050
Bse118I RCCGGY 1 cut(s) 1456
Bse1I ACTGG 2 cut(s) 668, 1530
Bse3DI GCAATG 4 cut(s) 480, 542, 1248, 1829
BseBI CCWGG 1 cut(s) 913
BseCI ATCGAT 1 cut(s) 1095
BseDI CCNNGG 3 cut(s) 257, 912, 1921
BseLI CCNNNNNNNGG 3 cut(s) 1243, 1351, 2050
BseMI GCAATG 4 cut(s) 480, 542, 1248, 1829
BseMII CTCAG 4 cut(s) 119, 443, 608, 1943
BseNI ACTGG 2 cut(s) 668, 1530
BseXI GCAGC 7 cut(s) 399, 1095, 1550, 1594, 1622, 1884, 1963
BseYI CCCAGC 1 cut(s) 1689
BsgI GTGCAG 1 cut(s) 1891
Bsh1236I CGCG 1 cut(s) 1892
BshFI GGCC 3 cut(s) 813, 1298, 1578
BshVI ATCGAT 1 cut(s) 1095
BsiHKAI GWGCWC 1 cut(s) 1489
BsiHKCI CYCGRG 1 cut(s) 1406
BsiSI CCGG 3 cut(s) 1345, 1457, 1467
BslFI GGGAC 1 cut(s) 1637
BslI CCNNNNNNNGG 3 cut(s) 1243, 1351, 2050
BsmAI GTCTC 5 cut(s) 402, 482, 568, 1759, 1856
BsmFI GGGAC 1 cut(s) 1637
BsmI GAATGC 1 cut(s) 268
BsnI GGCC 3 cut(s) 813, 1298, 1578
Bso31I GGTCTC 1 cut(s) 482
BsoBI CYCGRG 1 cut(s) 1406
Bsp1286I GDGCHC 1 cut(s) 1489
Bsp1407I TGTACA 1 cut(s) 1585
Bsp1720I GCTNAGC 1 cut(s) 105
Bsp68I TCGCGA 1 cut(s) 1892
BspACI CCGC 5 cut(s) 390, 455, 1210, 1352, 1936
BspANI GGCC 3 cut(s) 813, 1298, 1578
BspCNI CTCAG 4 cut(s) 118, 442, 607, 1944
BspDI ATCGAT 1 cut(s) 1095
BspFNI CGCG 1 cut(s) 1892
BspHI TCATGA 1 cut(s) 934
BspLI GGNNCC 2 cut(s) 1625, 2039
BspMAI CTGCAG 1 cut(s) 1612
BspOI GCTAGC 1 cut(s) 189
BspPI GGATC 5 cut(s) 520, 1362, 1434, 1895, 1946
BspQI GCTCTTC 2 cut(s) 196, 315
BspTNI GGTCTC 1 cut(s) 482
BsrDI GCAATG 4 cut(s) 480, 542, 1248, 1829
BsrFI RCCGGY 1 cut(s) 1456
BsrGI TGTACA 1 cut(s) 1585
BsrI ACTGG 2 cut(s) 668, 1530
BssAI RCCGGY 1 cut(s) 1456
BssECI CCNNGG 3 cut(s) 257, 912, 1921
BssNI GRCGYC 1 cut(s) 1272
BssSI CACGAG 1 cut(s) 339
BssT1I CCWWGG 2 cut(s) 257, 1921
Bst2BI CACGAG 1 cut(s) 339
Bst2UI CCWGG 1 cut(s) 913
Bst4CI ACNGT 8 cut(s) 476, 526, 602, 905, 1238, 1477, 1628, 1970
Bst6I CTCTTC 4 cut(s) 196, 315, 1749, 1854
BstACI GRCGYC 1 cut(s) 1272
BstAUI TGTACA 1 cut(s) 1585
BstDEI CTNAG 5 cut(s) 105, 429, 594, 1493, 1952
BstFNI CGCG 1 cut(s) 1892
BstH2I RGCGCY 1 cut(s) 1500
BstHHI GCGC 4 cut(s) 1001, 1088, 1130, 1499
BstMAI GTCTC 5 cut(s) 402, 482, 568, 1759, 1856
BstMWI GCNNNNNNNGC 6 cut(s) 491, 917, 992, 1220, 1462, 1878
BstNI CCWGG 1 cut(s) 913
BstNSI RCATGY 3 cut(s) 1392, 1456, 1962
BstPAI GACNNNNGTC 1 cut(s) 560
BstSCI CCNGG 2 cut(s) 911, 1465
BstSFI CTRYAG 2 cut(s) 1060, 1608
BstUI CGCG 1 cut(s) 1892
BstV1I GCAGC 7 cut(s) 399, 1095, 1550, 1594, 1622, 1884, 1963
BstX2I RGATCY 2 cut(s) 512, 725
BstYI RGATCY 2 cut(s) 512, 725
Bsu15I ATCGAT 1 cut(s) 1095
BsuRI GGCC 3 cut(s) 813, 1298, 1578
BsuTUI ATCGAT 1 cut(s) 1095
BtgZI GCGATG 1 cut(s) 1496
BtsI GCAGTG 1 cut(s) 1931
BtsIMutI CAGTG 2 cut(s) 160, 1931
BtuMI TCGCGA 1 cut(s) 1892
CciI TCATGA 1 cut(s) 934
CfoI GCGC 4 cut(s) 1001, 1088, 1130, 1499
Cfr10I RCCGGY 1 cut(s) 1456
Cfr13I GGNCC 2 cut(s) 1459, 1624
ClaI ATCGAT 1 cut(s) 1095
Csp6I GTAC 4 cut(s) 1234, 1259, 1586, 1914
CspCI CAANNNNNGTGG 2 cut(s) 1757, 1792
CviQI GTAC 4 cut(s) 1234, 1259, 1586, 1914
DdeI CTNAG 5 cut(s) 105, 429, 594, 1493, 1952
EaeI YGGCCR 1 cut(s) 811
Eam1104I CTCTTC 4 cut(s) 196, 315, 1749, 1854
EarI CTCTTC 4 cut(s) 196, 315, 1749, 1854
EciI GGCGGA 1 cut(s) 1367
Eco130I CCWWGG 2 cut(s) 257, 1921
Eco31I GGTCTC 1 cut(s) 482
Eco47I GGWCC 2 cut(s) 1459, 1624
Eco47III AGCGCT 1 cut(s) 1498
Eco57I CTGAAG 3 cut(s) 131, 389, 1878
Eco88I CYCGRG 1 cut(s) 1406
EcoRII CCWGG 1 cut(s) 911
EcoT14I CCWWGG 2 cut(s) 257, 1921
EcoT22I ATGCAT 2 cut(s) 1390, 1454
ErhI CCWWGG 2 cut(s) 257, 1921
FalI AAGNNNNNCTT 2 cut(s) 294, 326
FaqI GGGAC 1 cut(s) 1637
FauI CCCGC 1 cut(s) 1203
FbaI TGATCA 3 cut(s) 165, 942, 1443
Fnu4HI GCNGC 7 cut(s) 388, 1084, 1539, 1608, 1611, 1873, 1977
Fsp4HI GCNGC 7 cut(s) 388, 1084, 1539, 1608, 1611, 1873, 1977
FspBI CTAG 2 cut(s) 186, 2000
GlaI GCGC 4 cut(s) 1000, 1087, 1129, 1498
GluI GCNGC 7 cut(s) 388, 1084, 1539, 1608, 1611, 1873, 1977
GsaI CCCAGC 1 cut(s) 1693
HaeII RGCGCY 1 cut(s) 1500
HaeIII GGCC 3 cut(s) 813, 1298, 1578
HapII CCGG 3 cut(s) 1345, 1457, 1467
HhaI GCGC 4 cut(s) 1001, 1088, 1130, 1499
Hin1I GRCGYC 1 cut(s) 1272
Hin6I GCGC 4 cut(s) 999, 1086, 1128, 1497
HinP1I GCGC 4 cut(s) 999, 1086, 1128, 1497
HindIII AAGCTT 3 cut(s) 381, 1431, 1985
HinfI GANTC 6 cut(s) 51, 62, 353, 417, 832, 1948
HpaII CCGG 3 cut(s) 1345, 1457, 1467
HphI GGTGA 6 cut(s) 160, 212, 614, 846, 1742, 2084
Hpy166II GTNNAC 4 cut(s) 131, 1916, 1966, 2005
Hpy188I TCNGA 9 cut(s) 7, 61, 408, 471, 597, 636, 1724, 1746, 1953
Hpy8I GTNNAC 4 cut(s) 131, 1916, 1966, 2005
Hpy99I CGWCG 1 cut(s) 233
HpyAV CCTTC 7 cut(s) 527, 1118, 1319, 1648, 1701, 1789, 1793
HpyCH4III ACNGT 8 cut(s) 476, 526, 602, 905, 1238, 1477, 1628, 1970
HpyCH4IV ACGT 6 cut(s) 127, 1071, 1272, 1518, 1615, 1677
HpyF10VI GCNNNNNNNGC 6 cut(s) 491, 917, 992, 1220, 1462, 1878
HpyF3I CTNAG 5 cut(s) 105, 429, 594, 1493, 1952
HpySE526I ACGT 6 cut(s) 127, 1071, 1272, 1518, 1615, 1677
Hsp92I GRCGYC 1 cut(s) 1272
HspAI GCGC 4 cut(s) 999, 1086, 1128, 1497
Ksp22I TGATCA 3 cut(s) 165, 942, 1443
LguI GCTCTTC 2 cut(s) 196, 315
LmnI GCTCC 2 cut(s) 1246, 1484
Lsp1109I GCAGC 7 cut(s) 399, 1095, 1550, 1594, 1622, 1884, 1963
LweI GCATC 5 cut(s) 20, 295, 442, 1519, 1813
MaeI CTAG 2 cut(s) 186, 2000
MaeII ACGT 6 cut(s) 127, 1071, 1272, 1518, 1615, 1677
MaeIII GTNAC 7 cut(s) 200, 852, 1055, 1273, 1301, 1471, 1737
MflI RGATCY 2 cut(s) 512, 725
MhlI GDGCHC 1 cut(s) 1489
MlsI TGGCCA 1 cut(s) 813
MluCI AATT 1 cut(s) 43
MluNI TGGCCA 1 cut(s) 813
MmeI TCCRAC 3 cut(s) 1593, 1660, 1692
MnlI CCTC 9 cut(s) 249, 255, 378, 546, 607, 633, 1630, 1708, 1878
Mox20I TGGCCA 1 cut(s) 813
Mph1103I ATGCAT 2 cut(s) 1390, 1454
MroXI GAANNNNTTC 1 cut(s) 55
MscI TGGCCA 1 cut(s) 813
MseI TTAA 3 cut(s) 378, 1091, 2049
MslI CAYNNNNRTG 2 cut(s) 1266, 1618
Msp20I TGGCCA 1 cut(s) 813
MspA1I CMGCKG 2 cut(s) 109, 390
MspI CCGG 3 cut(s) 1345, 1457, 1467
MspR9I CCNGG 2 cut(s) 913, 1467
Mva1269I GAATGC 1 cut(s) 268
MvaI CCWGG 1 cut(s) 913
MvnI CGCG 1 cut(s) 1892
MwoI GCNNNNNNNGC 6 cut(s) 491, 917, 992, 1220, 1462, 1878
NciI CCSGG 1 cut(s) 1467
NheI GCTAGC 1 cut(s) 185
NlaIV GGNNCC 2 cut(s) 1625, 2039
NmuCI GTSAC 5 cut(s) 200, 852, 1055, 1273, 1737
NruI TCGCGA 1 cut(s) 1892
NsiI ATGCAT 2 cut(s) 1390, 1454
NspI RCATGY 3 cut(s) 1392, 1456, 1962
OliI CACNNNNGTG 1 cut(s) 1618
PaeI GCATGC 2 cut(s) 1456, 1962
PagI TCATGA 1 cut(s) 934
PciSI GCTCTTC 2 cut(s) 196, 315
PcsI WCGNNNNNNNCGW 1 cut(s) 1842
PctI GAATGC 1 cut(s) 268
PdmI GAANNNNTTC 1 cut(s) 55
PfeI GAWTC 6 cut(s) 51, 62, 353, 417, 832, 1948
PkrI GCNGC 7 cut(s) 389, 1085, 1540, 1609, 1612, 1874, 1978
PshAI GACNNNNGTC 1 cut(s) 560
PshBI ATTAAT 1 cut(s) 1091
PsiI TTATAA 1 cut(s) 1910
Psp6I CCWGG 1 cut(s) 911
PspFI CCCAGC 1 cut(s) 1689
PspGI CCWGG 1 cut(s) 911
PspN4I GGNNCC 2 cut(s) 1625, 2039
PspPI GGNCC 2 cut(s) 1459, 1624
PstI CTGCAG 1 cut(s) 1612
PsuI RGATCY 2 cut(s) 512, 725
PvuII CAGCTG 1 cut(s) 109
RruI TCGCGA 1 cut(s) 1892
RsaI GTAC 4 cut(s) 1235, 1260, 1587, 1915
RsaNI GTAC 4 cut(s) 1234, 1259, 1586, 1914
RseI CAYNNNNRTG 2 cut(s) 1266, 1618
SapI GCTCTTC 2 cut(s) 196, 315
SaqAI TTAA 3 cut(s) 378, 1091, 2049
SatI GCNGC 7 cut(s) 388, 1084, 1539, 1608, 1611, 1873, 1977
Sau96I GGNCC 2 cut(s) 1459, 1624
ScrFI CCNGG 2 cut(s) 913, 1467
SduI GDGCHC 1 cut(s) 1489
SfaNI GCATC 5 cut(s) 20, 295, 442, 1519, 1813
SfcI CTRYAG 2 cut(s) 1060, 1608
SinI GGWCC 2 cut(s) 1459, 1624
SmiMI CAYNNNNRTG 2 cut(s) 1266, 1618
SmlI CTYRAG 3 cut(s) 620, 1002, 1016
SmoI CTYRAG 3 cut(s) 620, 1002, 1016
SphI GCATGC 2 cut(s) 1456, 1962
Sse9I AATT 1 cut(s) 43
SsiI CCGC 5 cut(s) 390, 455, 1210, 1352, 1936
SspI AATATT 1 cut(s) 252
SspMI CTAG 2 cut(s) 186, 2000
StyD4I CCNGG 2 cut(s) 911, 1465
StyI CCWWGG 2 cut(s) 257, 1921
TaaI ACNGT 8 cut(s) 476, 526, 602, 905, 1238, 1477, 1628, 1970
TaiI ACGT 6 cut(s) 130, 1074, 1275, 1521, 1618, 1680
TaqI TCGA 3 cut(s) 228, 1095, 1994
TaqII GACCGA 1 cut(s) 1161
TasI AATT 1 cut(s) 43
TatI WGTACW 3 cut(s) 1258, 1585, 1913
TfiI GAWTC 6 cut(s) 51, 62, 353, 417, 832, 1948
Tru1I TTAA 3 cut(s) 378, 1091, 2049
Tru9I TTAA 3 cut(s) 378, 1091, 2049
TscAI CASTG 2 cut(s) 160, 1938
TseFI GTSAC 5 cut(s) 200, 852, 1055, 1273, 1737
TseI GCWGC 7 cut(s) 387, 1083, 1538, 1607, 1610, 1872, 1976
Tsp45I GTSAC 5 cut(s) 200, 852, 1055, 1273, 1737
TspRI CASTG 2 cut(s) 160, 1938
VpaK11BI GGWCC 2 cut(s) 1459, 1624
VspI ATTAAT 1 cut(s) 1091
XceI RCATGY 3 cut(s) 1392, 1456, 1962
XcmI CCANNNNNNNNNTGG 1 cut(s) 2051
XmnI GAANNNNTTC 1 cut(s) 55
XspI CTAG 2 cut(s) 186, 2000
ZraI GACGTC 1 cut(s) 1273
Zsp2I ATGCAT 2 cut(s) 1390, 1454
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.