Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0017162

Physical Location & Seq

Genomic Coordinates Reverse (-)

7465433 .. 7467649

Gene Structure 2217 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1101900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2217 bp

ATGGCTCTCGCTAGGAGAGTCTCTCTCTTTCCCCTTCCCGCCAAATTCCGGACGTTGGCTCCCAAAACGGCGACGTCTCAAGACTTTGAAACTCCGGCGTCGTTTTCATTCACCTTCATCCGTCACTACTGTTCGTCTCCTCTCCGTCTAGATCCGTACTGCTACGACGACCAACACCTCCGTCACGGCCACGACCCGGACTCCTTCTTCGGGTCTCTGATCGATGGTTCGACCCGAAAGAGCCAGTTGGGTCAAATCCATGCCCAGTTAGTTGTATTGGGTTTGATAGACAGTGGCTTTTTGATCACCAAATTGGTCAATGCAAGCTCGAATCTCGGGTATATTTCGTACGCCCGCCAAGTGTTTGATGAATTTACTGACCCAGATGTGTTTCAGTGGAATGCGATCATTAGGTGTTATTCTAGGCACAATGTGTTTTCTCAGGCTATAGAAATGTATTCTAGGATGCAAGTAATGGGTGTCAGTCCAGATGGGTTTACTTTTCCTCATGTGCTTAAAGCTTGCAGTGGCATGCCGGACCTCGAAATGGGTCGACGGGTTCATGGACAGGTGTTTAGACATGGGTTTGAATCAGATGTTTTTGTGCAGAATGGTCTCGTGGCGTTGTATGCTAAATGTAGTCGAATAGATCGTGCTAGGGCTGTGTTTGATGGTTTAGGTGAGAGGACGGTTGTTTCCTGGACTTCGATGATTTCGGGGTATGCCCAGAATGGCCAGCCTTTGGAAGCTTTGAGAATTTTTGGTCTGATGAGAAATTTGAATGTGAAACCGGATTGGATTGTTCTTGTTAGTGTTCTAAAAGCTTATACTGATGTAGAAGACTTGGGACAGGGGACATCTGTTCATGGTTGTTTGATCAAAATGGGTCTTGAATCTGAACCTGACTTGCTCATTGCACTCACGGCAATGTATGCAAAAAGTGGGCAGGTGATGGCTGCCAGATCGTTTTTTGATCAGATGCAAACGCCGAACGTAATACTGTGGAATGCTATGATATCTGGTTATGCGAAGAATGGTTATGCTAATGAGGCTGTAGAGCTATTCCGGGAGATGATCACAAAACATTTTAGAACAGATTCAATAACAATGAGGTCTGCTATATCTGCATGCGCCCAGGTGGGTTCTCTTGACCTAGCAAAATGGATGGACGATTATATCAATAAAAGTGAGTATAGGAATAATGTTTTTGTTAACACTGCCCTAATTGATATGTATGCAAAATGTGGAAGTGTCGATTTTGCTCGAATGGTTTTTGATAGAACGCCTAATAAAGATGTTGTGGTGTGGAGTGCAATGATCGTGGGATACGGATTACATGGTCGAGCACGAGAAGCCATTGATCTTTTCCATTCTATGCAGCAGGCAGGAGTGCCACCCAATGATGTCACCTTCCTAGGGCTCCTCACTGCATGCAATCATTCAGGCCTTGTTGAGGAAGGATGGGAGCTGTTCCACCGTATGTTAAACTGCGGGATTGAGCCTGGAAACCAACATTATTCTTGTGTGGTTGATCTTCTTGGACGTGCAGGCCGCTTGGATCAAGCTTACGATTTTATCAGAAAGATGCCAATTGAACCTGGTATAAGTGTATGGGGAGCACTTCTGGGTTCATGCAAGATTTATCGTCATGTAACTTTGGGAGAATACGCTGCAGAACAGCTTTTCTCTATAGATCCATATAATACAGGGCATTATGTTCAACTCTCAAATCTTTATGCTTCAGCCCGCTTATGGGATCATGTTGCAAAGGTACGAGTATTGATGAGGGAAAAAGGACTGATAAAGGACCTTGGACATAGTTTGATTGAGGTCAATGGGAAGCTTCAGGCATTTCATGTGGGAGACAAGTCTCATCCACGGTCTAAGGAAATTTATGAAGAGCTCGAAAGTCTGGAGAGGAGGTTAAAGGAGGCAGGATTCATCCCGAATACAGATTCTGTTCTGCATGATTTGAATCATGAAGAGACAGAAGAGACACTTTGTAATCACAGCGAGAGGCTGGCAATTGCTTATGGCCTCATCAGCACTGCTCCAGGAACTACACTTCGGATCACCAAAAATCTTAGAGCATGTGTGAATTGTCATTCAGCAACCAAGCTAATATCGAAGCTTGTCAACAGGGAGATAGTTGTTAGGGATGCAAAGCGTTTTCATCATTTCAAGGATGGATGTTGTTCATGTGGAGATTACTGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016071 GO:0016556 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0046483 GO:0071704 GO:0080156 GO:0090304 GO:0090305 GO:0097159 GO:1900864 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase HLH PPR PPR_2

Protein Analysis

739

Amino Acids

82.92

Weight (kDa)

6.84

Isoelectric Point (pI)

39.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	128 - 175	1.7e-09	PPR repeat family
PPR_2	PF13041	230 - 275	6.2e-08	PPR repeat family
PPR	PF01535	232 - 261	2.7e-08	PPR repeat
PPR_2	PF13041	330 - 378	2.7e-11	PPR repeat family
PPR_1	PF12854	330 - 358	2.3e-08	PPR repeat
PPR	PF01535	334 - 361	4.2e-09	PPR repeat
PPR_2	PF13041	431 - 478	1.1e-10	PPR repeat family
PPR	PF01535	434 - 464	2.9e-06	PPR repeat
E_motif	PF20431	548 - 610	3.6e-13	E motif
Eplus_motif	PF20430	618 - 642	1.8e-09	E+ motif
DYW_deaminase	PF14432	646 - 738	6.1e-41	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0017162)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G12770
fragaria_vesca	FvH4_6g08230
malus_domestica	MD09G1101900.v1.1
prunus_persica	Prupe.3G223800_v2.0.a1
pyrus_communis	pycom09g02560
rosa_chinensis	RchiOBHm_Chr3g0458151
rosa_multiflora	Rmu_co8353983.1_g000001
rosa_roxburghii	Rroxscaffold_6G00421260
rosa_rugosa	Rorug03G0025100
rosa_samantha	Rh3AG085800 Rh3BG088500 Rh3DG089500
rosa_wichuraiana	Rw3G007290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	937
AatII	GACGTC	1 cut(s)	77
Acc36I	ACCTGC	1 cut(s)	937
AccB7I	CCANNNNNTGG	1 cut(s)	742
AccI	GTMKAC	1 cut(s)	553
AccIII	TCCGGA	1 cut(s)	48
AciI	CCGC	5 cut(s)	39, 355, 1491, 1552, 1747
AclWI	GGATC	5 cut(s)	146, 1566, 1688, 1764, 2078
AcoI	YGGCCR	2 cut(s)	187, 733
AcsI	RAATTY	5 cut(s)	44, 371, 756, 775, 1890
AcuI	CTGAAG	2 cut(s)	1725, 1829
AcyI	GRCGYC	2 cut(s)	74, 98
AdeI	CACNNNGTG	1 cut(s)	433
AfaI	GTAC	3 cut(s)	158, 350, 1773
AgsI	TTSAA	9 cut(s)	89, 590, 781, 893, 1101, 1595, 1721, 1975, 2182
AjiI	CACGTC	1 cut(s)	1544
AjnI	CCWGG	5 cut(s)	698, 1134, 1501, 1597, 2053
Alw21I	GWGCWC	3 cut(s)	1348, 1621, 1905
Alw26I	GTCTC	9 cut(s)	25, 81, 141, 219, 620, 1857, 1875, 1979, 1988
AlwI	GGATC	5 cut(s)	146, 1566, 1688, 1764, 2078
AlwNI	CAGNNNCTG	1 cut(s)	1958
Ama87I	CYCGRG	1 cut(s)	335
Aor13HI	TCCGGA	1 cut(s)	48
AoxI	GGCC	5 cut(s)	187, 733, 1444, 1549, 2035
ApeKI	GCWGC	3 cut(s)	956, 1378, 1670
ApoI	RAATTY	5 cut(s)	44, 371, 756, 775, 1890
ArsI	GACNNNNNNTTYG	2 cut(s)	191, 223
Asp700I	GAANNNNTTC	1 cut(s)	1096
AspA2I	CCTAGG	1 cut(s)	1414
AspLEI	GCGC	1 cut(s)	1133
AspS9I	GGNCC	2 cut(s)	538, 1807
AsuC2I	CCSGG	2 cut(s)	197, 1067
AsuHPI	GGTGA	6 cut(s)	103, 298, 692, 961, 1399, 2065
AvaI	CYCGRG	1 cut(s)	335
AvaII	GGWCC	2 cut(s)	538, 1807
AvrII	CCTAGG	1 cut(s)	1414
BalI	TGGCCA	1 cut(s)	735
BanII	GRGCYC	2 cut(s)	1422, 1905
BauI	CACGAG	2 cut(s)	617, 1347
BbsI	GAAGAC	1 cut(s)	846
Bbv12I	GWGCWC	3 cut(s)	1348, 1621, 1905
BbvI	GCAGC	3 cut(s)	943, 1390, 1657
BccI	CCATC	7 cut(s)	218, 485, 665, 946, 1159, 1455, 2180
BceAI	ACGGC	3 cut(s)	84, 202, 939
BciT130I	CCWGG	5 cut(s)	700, 1136, 1503, 1599, 2055
BciVI	GTATCC	1 cut(s)	1319
BclI	TGATCA	4 cut(s)	303, 876, 973, 1074
BcnI	CCSGG	2 cut(s)	197, 1067
BcoDI	GTCTC	9 cut(s)	25, 81, 141, 219, 620, 1857, 1875, 1979, 1988
BfaI	CTAG	7 cut(s)	12, 149, 423, 462, 657, 1154, 1415
BfmI	CTRYAG	4 cut(s)	447, 1053, 1671, 1689
BfuAI	ACCTGC	1 cut(s)	937
BfuI	GTATCC	1 cut(s)	1319
BisI	GCNGC	4 cut(s)	957, 1379, 1552, 1671
BlnI	CCTAGG	1 cut(s)	1414
BlsI	GCNGC	4 cut(s)	958, 1380, 1553, 1672
Bme1390I	CCNGG	7 cut(s)	197, 700, 1067, 1136, 1503, 1599, 2055
Bme18I	GGWCC	2 cut(s)	538, 1807
BmeT110I	CYCGRG	1 cut(s)	335
BmgBI	CACGTC	1 cut(s)	1544
BmgT120I	GGNCC	2 cut(s)	538, 1807
BmiI	GGNNCC	2 cut(s)	60, 1421
BmrFI	CCNGG	7 cut(s)	197, 700, 1067, 1136, 1503, 1599, 2055
BmrI	ACTGGG	1 cut(s)	259
BmsI	GCATC	4 cut(s)	456, 969, 1575, 2149
BmuI	ACTGGG	1 cut(s)	259
BpiI	GAAGAC	1 cut(s)	846
BplI	GAGNNNNNCTC	4 cut(s)	7, 39, 9, 41
BpmI	CTGGAG	2 cut(s)	1934, 2037
BpuEI	CTTGAG	1 cut(s)	63
BpuMI	CCSGG	2 cut(s)	197, 1067
Bsa29I	ATCGAT	1 cut(s)	222
BsaBI	GATNNNNATC	1 cut(s)	1974
BsaHI	GRCGYC	2 cut(s)	74, 98
BsaI	GGTCTC	2 cut(s)	219, 620
BsaJI	CCNNGG	4 cut(s)	1134, 1414, 1810, 1877
BsaWI	WCCGGW	2 cut(s)	48, 790
BsaXI	ACNNNNNCTCC	6 cut(s)	43, 73, 185, 215, 1907, 1937
Bse1I	ACTGG	3 cut(s)	244, 265, 2216
Bse3DI	GCAATG	3 cut(s)	912, 933, 1320
Bse8I	GATNNNNATC	1 cut(s)	1974
BseAI	TCCGGA	1 cut(s)	48
BseBI	CCWGG	5 cut(s)	700, 1136, 1503, 1599, 2055
BseCI	ATCGAT	1 cut(s)	222
BseDI	CCNNGG	4 cut(s)	1134, 1414, 1810, 1877
BseGI	GGATG	9 cut(s)	117, 471, 1170, 1466, 1873, 1941, 2164, 2191, 2195
BseJI	GATNNNNATC	1 cut(s)	1974
BseMI	GCAATG	3 cut(s)	912, 933, 1320
BseMII	CTCAG	1 cut(s)	455
BseNI	ACTGG	3 cut(s)	244, 265, 2216
BseRI	GAGGAG	3 cut(s)	129, 1412, 1933
BseXI	GCAGC	3 cut(s)	943, 1390, 1657
BsgI	GTGCAG	2 cut(s)	626, 1566
BshFI	GGCC	5 cut(s)	189, 735, 1446, 1551, 2037
BshVI	ATCGAT	1 cut(s)	222
BsiHKAI	GWGCWC	3 cut(s)	1348, 1621, 1905
BsiHKCI	CYCGRG	1 cut(s)	335
BsiSI	CCGG	6 cut(s)	49, 95, 197, 536, 791, 1066
BsiWI	CGTACG	1 cut(s)	348
BslFI	GGGAC	2 cut(s)	861, 868
BsmAI	GTCTC	9 cut(s)	25, 81, 141, 219, 620, 1857, 1875, 1979, 1988
BsmBI	CGTCTC	2 cut(s)	81, 141
BsmFI	GGGAC	2 cut(s)	861, 868
BsmI	GAATGC	2 cut(s)	406, 1012
BsnI	GGCC	5 cut(s)	189, 735, 1446, 1551, 2037
Bso31I	GGTCTC	2 cut(s)	219, 620
BsoBI	CYCGRG	1 cut(s)	335
Bsp1286I	GDGCHC	4 cut(s)	1348, 1422, 1621, 1905
Bsp13I	TCCGGA	1 cut(s)	48
BspACI	CCGC	5 cut(s)	39, 355, 1491, 1552, 1747
BspANI	GGCC	5 cut(s)	189, 735, 1446, 1551, 2037
BspCNI	CTCAG	1 cut(s)	454
BspDI	ATCGAT	1 cut(s)	222
BspEI	TCCGGA	1 cut(s)	48
BspHI	TCATGA	1 cut(s)	1978
BspLI	GGNNCC	2 cut(s)	60, 1421
BspMAI	CTGCAG	1 cut(s)	1675
BspMI	ACCTGC	1 cut(s)	937
BspPI	GGATC	5 cut(s)	146, 1566, 1688, 1764, 2078
BspQI	GCTCTTC	1 cut(s)	1893
BspTNI	GGTCTC	2 cut(s)	219, 620
BsrDI	GCAATG	3 cut(s)	912, 933, 1320
BsrI	ACTGG	3 cut(s)	244, 265, 2216
BssECI	CCNNGG	4 cut(s)	1134, 1414, 1810, 1877
BssNI	GRCGYC	2 cut(s)	74, 98
BssSI	CACGAG	2 cut(s)	617, 1347
BssT1I	CCWWGG	2 cut(s)	1414, 1810
Bst2BI	CACGAG	2 cut(s)	617, 1347
Bst2UI	CCWGG	5 cut(s)	700, 1136, 1503, 1599, 2055
Bst4CI	ACNGT	6 cut(s)	131, 293, 691, 1002, 1478, 1881
Bst6I	CTCTTC	3 cut(s)	1893, 1977, 1986
BstACI	GRCGYC	2 cut(s)	74, 98
BstAPI	GCANNNNNTGC	1 cut(s)	932
BstDEI	CTNAG	3 cut(s)	441, 1884, 2084
BstDSI	CCRYGG	1 cut(s)	1877
BstENI	CCTNNNNNAGG	1 cut(s)	1451
BstF5I	GGATG	9 cut(s)	117, 471, 1170, 1466, 1873, 1941, 2164, 2191, 2195
BstHHI	GCGC	1 cut(s)	1133
BstMAI	GTCTC	9 cut(s)	25, 81, 141, 219, 620, 1857, 1875, 1979, 1988
BstMWI	GCNNNNNNNGC	7 cut(s)	629, 923, 932, 1049, 1124, 1352, 2043
BstNI	CCWGG	5 cut(s)	700, 1136, 1503, 1599, 2055
BstNSI	RCATGY	4 cut(s)	535, 1131, 1434, 2094
BstSCI	CCNGG	7 cut(s)	195, 698, 1065, 1134, 1501, 1597, 2053
BstSFI	CTRYAG	4 cut(s)	447, 1053, 1671, 1689
BstV1I	GCAGC	3 cut(s)	943, 1390, 1657
BstV2I	GAAGAC	1 cut(s)	846
BstX2I	RGATCY	2 cut(s)	151, 1693
BstYI	RGATCY	2 cut(s)	151, 1693
Bsu15I	ATCGAT	1 cut(s)	222
BsuI	GTATCC	1 cut(s)	1319
BsuRI	GGCC	5 cut(s)	189, 735, 1446, 1551, 2037
BsuTUI	ATCGAT	1 cut(s)	222
BtgI	CCRYGG	1 cut(s)	1877
BtrI	CACGTC	1 cut(s)	1544
BtsCI	GGATG	9 cut(s)	117, 471, 1170, 1466, 1873, 1941, 2164, 2191, 2195
BtsI	GCAGTG	4 cut(s)	532, 1215, 1425, 2046
BtsIMutI	CAGTG	6 cut(s)	298, 401, 532, 1215, 1425, 2046
BveI	ACCTGC	1 cut(s)	937
CaiI	CAGNNNCTG	1 cut(s)	1958
CciI	TCATGA	1 cut(s)	1978
CfoI	GCGC	1 cut(s)	1133
Cfr13I	GGNCC	2 cut(s)	538, 1807
ClaI	ATCGAT	1 cut(s)	222
CseI	GACGC	1 cut(s)	87
CsiI	ACCWGGT	1 cut(s)	1597
Csp6I	GTAC	3 cut(s)	157, 349, 1772
CspCI	CAANNNNNGTGG	2 cut(s)	1302, 1337
CviQI	GTAC	3 cut(s)	157, 349, 1772
DdeI	CTNAG	3 cut(s)	441, 1884, 2084
DraIII	CACNNNGTG	1 cut(s)	433
EaeI	YGGCCR	2 cut(s)	187, 733
Eam1104I	CTCTTC	3 cut(s)	1893, 1977, 1986
EarI	CTCTTC	3 cut(s)	1893, 1977, 1986
Ecl136II	GAGCTC	1 cut(s)	1903
Eco130I	CCWWGG	2 cut(s)	1414, 1810
Eco147I	AGGCCT	1 cut(s)	1446
Eco24I	GRGCYC	2 cut(s)	1422, 1905
Eco31I	GGTCTC	2 cut(s)	219, 620
Eco32I	GATATC	1 cut(s)	1017
Eco47I	GGWCC	2 cut(s)	538, 1807
Eco53kI	GAGCTC	1 cut(s)	1903
Eco57I	CTGAAG	2 cut(s)	1725, 1829
Eco88I	CYCGRG	1 cut(s)	335
EcoICRI	GAGCTC	1 cut(s)	1903
EcoNI	CCTNNNNNAGG	1 cut(s)	1451
EcoO109I	RGGNCCY	1 cut(s)	1807
EcoRII	CCWGG	5 cut(s)	698, 1134, 1501, 1597, 2053
EcoRV	GATATC	1 cut(s)	1017
EcoT14I	CCWWGG	2 cut(s)	1414, 1810
EcoT38I	GRGCYC	2 cut(s)	1422, 1905
ErhI	CCWWGG	2 cut(s)	1414, 1810
Esp3I	CGTCTC	2 cut(s)	81, 141
FalI	AAGNNNNNCTT	2 cut(s)	1983, 2015
FaqI	GGGAC	2 cut(s)	861, 868
FauI	CCCGC	4 cut(s)	46, 362, 1484, 1754
FbaI	TGATCA	4 cut(s)	303, 876, 973, 1074
FblI	GTMKAC	1 cut(s)	553
Fnu4HI	GCNGC	4 cut(s)	957, 1379, 1552, 1671
FokI	GGATG	9 cut(s)	104, 478, 1177, 1473, 1860, 1928, 2171, 2198, 2202
FriOI	GRGCYC	2 cut(s)	1422, 1905
Fsp4HI	GCNGC	4 cut(s)	957, 1379, 1552, 1671
FspBI	CTAG	7 cut(s)	12, 149, 423, 462, 657, 1154, 1415
GlaI	GCGC	1 cut(s)	1132
GluI	GCNGC	4 cut(s)	957, 1379, 1552, 1671
GsuI	CTGGAG	2 cut(s)	1934, 2037
HaeIII	GGCC	5 cut(s)	189, 735, 1446, 1551, 2037
HapII	CCGG	6 cut(s)	49, 95, 197, 536, 791, 1066
HgaI	GACGC	1 cut(s)	87
HhaI	GCGC	1 cut(s)	1133
Hin1I	GRCGYC	2 cut(s)	74, 98
Hin6I	GCGC	1 cut(s)	1131
HinP1I	GCGC	1 cut(s)	1131
HincII	GTYRAC	3 cut(s)	554, 1213, 2137
HindII	GTYRAC	3 cut(s)	554, 1213, 2137
HindIII	AAGCTT	6 cut(s)	519, 747, 822, 1563, 1841, 2129
HinfI	GANTC	9 cut(s)	18, 200, 331, 590, 893, 1097, 1938, 1955, 1975
HpaI	GTTAAC	1 cut(s)	1213
HpaII	CCGG	6 cut(s)	49, 95, 197, 536, 791, 1066
HphI	GGTGA	6 cut(s)	103, 298, 692, 961, 1399, 2065
Hpy166II	GTNNAC	4 cut(s)	498, 554, 1213, 2137
Hpy188I	TCNGA	7 cut(s)	219, 595, 768, 898, 978, 1580, 2070
Hpy188III	TCNNGA	9 cut(s)	49, 80, 149, 488, 890, 1148, 1913, 1945, 1979
Hpy8I	GTNNAC	4 cut(s)	498, 554, 1213, 2137
Hpy99I	CGWCG	4 cut(s)	76, 103, 170, 558
HpyAV	CCTTC	5 cut(s)	44, 124, 214, 1420, 1451
HpyCH4III	ACNGT	6 cut(s)	131, 293, 691, 1002, 1478, 1881
HpyCH4IV	ACGT	4 cut(s)	53, 74, 993, 1543
HpyF10VI	GCNNNNNNNGC	7 cut(s)	629, 923, 932, 1049, 1124, 1352, 2043
HpyF3I	CTNAG	3 cut(s)	441, 1884, 2084
HpySE526I	ACGT	4 cut(s)	53, 74, 993, 1543
Hsp92I	GRCGYC	2 cut(s)	74, 98
HspAI	GCGC	1 cut(s)	1131
Kpn2I	TCCGGA	1 cut(s)	48
Ksp22I	TGATCA	4 cut(s)	303, 876, 973, 1074
KspAI	GTTAAC	1 cut(s)	1213
LguI	GCTCTTC	1 cut(s)	1893
LmnI	GCTCC	5 cut(s)	64, 1425, 1465, 1616, 2056
Lsp1109I	GCAGC	3 cut(s)	943, 1390, 1657
LweI	GCATC	4 cut(s)	456, 969, 1575, 2149
MabI	ACCWGGT	1 cut(s)	1597
MaeI	CTAG	7 cut(s)	12, 149, 423, 462, 657, 1154, 1415
MaeII	ACGT	4 cut(s)	53, 74, 993, 1543
MaeIII	GTNAC	4 cut(s)	122, 182, 1405, 1651
MboII	GAAGA	7 cut(s)	199, 851, 1042, 1526, 1910, 1994, 2003
MfeI	CAATTG	2 cut(s)	1590, 2025
MflI	RGATCY	2 cut(s)	151, 1693
MhlI	GDGCHC	4 cut(s)	1348, 1422, 1621, 1905
MlsI	TGGCCA	1 cut(s)	735
MluNI	TGGCCA	1 cut(s)	735
MlyI	GAGTC	2 cut(s)	27, 194
Mox20I	TGGCCA	1 cut(s)	735
MroI	TCCGGA	1 cut(s)	48
MroXI	GAANNNNTTC	1 cut(s)	1096
MscI	TGGCCA	1 cut(s)	735
MseI	TTAA	4 cut(s)	516, 1212, 1484, 1925
MslI	CAYNNNNRTG	1 cut(s)	926
Msp20I	TGGCCA	1 cut(s)	735
MspI	CCGG	6 cut(s)	49, 95, 197, 536, 791, 1066
MspR9I	CCNGG	7 cut(s)	197, 700, 1067, 1136, 1503, 1599, 2055
MunI	CAATTG	2 cut(s)	1590, 2025
Mva1269I	GAATGC	2 cut(s)	406, 1012
MvaI	CCWGG	5 cut(s)	700, 1136, 1503, 1599, 2055
MwoI	GCNNNNNNNGC	7 cut(s)	629, 923, 932, 1049, 1124, 1352, 2043
NciI	CCSGG	2 cut(s)	197, 1067
NlaIV	GGNNCC	2 cut(s)	60, 1421
NmuCI	GTSAC	3 cut(s)	122, 182, 1405
NspI	RCATGY	4 cut(s)	535, 1131, 1434, 2094
PaeI	GCATGC	3 cut(s)	535, 1131, 1434
PagI	TCATGA	1 cut(s)	1978
PaqCI	CACCTGC	1 cut(s)	937
PceI	AGGCCT	1 cut(s)	1446
PciSI	GCTCTTC	1 cut(s)	1893
PcsI	WCGNNNNNNNCGW	1 cut(s)	649
PctI	GAATGC	2 cut(s)	406, 1012
PdmI	GAANNNNTTC	1 cut(s)	1096
PfeI	GAWTC	7 cut(s)	331, 590, 893, 1097, 1938, 1955, 1975
Pfl23II	CGTACG	1 cut(s)	348
PflMI	CCANNNNNTGG	1 cut(s)	742
PfoI	TCCNGGA	3 cut(s)	698, 1065, 2053
PkrI	GCNGC	4 cut(s)	958, 1380, 1553, 1672
PleI	GAGTC	2 cut(s)	26, 194
PpsI	GAGTC	2 cut(s)	26, 194
PpuMI	RGGWCCY	1 cut(s)	1807
Psp124BI	GAGCTC	1 cut(s)	1905
Psp5II	RGGWCCY	1 cut(s)	1807
Psp6I	CCWGG	5 cut(s)	698, 1134, 1501, 1597, 2053
PspGI	CCWGG	5 cut(s)	698, 1134, 1501, 1597, 2053
PspLI	CGTACG	1 cut(s)	348
PspN4I	GGNNCC	2 cut(s)	60, 1421
PspPI	GGNCC	2 cut(s)	538, 1807
PspPPI	RGGWCCY	1 cut(s)	1807
PstI	CTGCAG	1 cut(s)	1675
PstNI	CAGNNNCTG	1 cut(s)	1958
PsuI	RGATCY	2 cut(s)	151, 1693
RsaI	GTAC	3 cut(s)	158, 350, 1773
RsaNI	GTAC	3 cut(s)	157, 349, 1772
RseI	CAYNNNNRTG	1 cut(s)	926
SacI	GAGCTC	1 cut(s)	1905
SalI	GTCGAC	1 cut(s)	552
SapI	GCTCTTC	1 cut(s)	1893
SaqAI	TTAA	4 cut(s)	516, 1212, 1484, 1925
SatI	GCNGC	4 cut(s)	957, 1379, 1552, 1671
Sau96I	GGNCC	2 cut(s)	538, 1807
SchI	GAGTC	2 cut(s)	27, 194
ScrFI	CCNGG	7 cut(s)	197, 700, 1067, 1136, 1503, 1599, 2055
SduI	GDGCHC	4 cut(s)	1348, 1422, 1621, 1905
SexAI	ACCWGGT	1 cut(s)	1597
SfaNI	GCATC	4 cut(s)	456, 969, 1575, 2149
SfcI	CTRYAG	4 cut(s)	447, 1053, 1671, 1689
SinI	GGWCC	2 cut(s)	538, 1807
SmiMI	CAYNNNNRTG	1 cut(s)	926
SmlI	CTYRAG	1 cut(s)	78
SmoI	CTYRAG	1 cut(s)	78
SphI	GCATGC	3 cut(s)	535, 1131, 1434
SseBI	AGGCCT	1 cut(s)	1446
SsiI	CCGC	5 cut(s)	39, 355, 1491, 1552, 1747
SspMI	CTAG	7 cut(s)	12, 149, 423, 462, 657, 1154, 1415
SstI	GAGCTC	1 cut(s)	1905
StuI	AGGCCT	1 cut(s)	1446
StyD4I	CCNGG	7 cut(s)	195, 698, 1065, 1134, 1501, 1597, 2053
StyI	CCWWGG	2 cut(s)	1414, 1810
TaaI	ACNGT	6 cut(s)	131, 293, 691, 1002, 1478, 1881
TaiI	ACGT	4 cut(s)	56, 77, 996, 1546
TauI	GCSGC	1 cut(s)	1554
TfiI	GAWTC	7 cut(s)	331, 590, 893, 1097, 1938, 1955, 1975
Tru1I	TTAA	4 cut(s)	516, 1212, 1484, 1925
Tru9I	TTAA	4 cut(s)	516, 1212, 1484, 1925
TscAI	CASTG	6 cut(s)	298, 401, 532, 1222, 1432, 2053
TseFI	GTSAC	3 cut(s)	122, 182, 1405
TseI	GCWGC	3 cut(s)	956, 1378, 1670
Tsp45I	GTSAC	3 cut(s)	122, 182, 1405
TspGWI	ACGGA	5 cut(s)	110, 134, 144, 170, 1344
TspRI	CASTG	6 cut(s)	298, 401, 532, 1222, 1432, 2053
Van91I	CCANNNNNTGG	1 cut(s)	742
VpaK11BI	GGWCC	2 cut(s)	538, 1807
XagI	CCTNNNNNAGG	1 cut(s)	1451
XapI	RAATTY	5 cut(s)	44, 371, 756, 775, 1890
XbaI	TCTAGA	1 cut(s)	148
XceI	RCATGY	4 cut(s)	535, 1131, 1434, 2094
XmaJI	CCTAGG	1 cut(s)	1414
XmiI	GTMKAC	1 cut(s)	553
XmnI	GAANNNNTTC	1 cut(s)	1096
XspI	CTAG	7 cut(s)	12, 149, 423, 462, 657, 1154, 1415
ZraI	GACGTC	1 cut(s)	75

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.