FvH4_6g08230

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0017162
Physical Location & Seq
Forward (+)
4900224 .. 4903198
2975 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g08230.t1

Sequence Viewer

Length: 1737 bp
ATGTATTGTGGGATGCAGGAGATGGGTGTGGGTCCGGATGGTTTCACTTTCCCTCATGTGCTCAAAGCCTGCGGCGGGTTGGGGGCGGTTGAGATAGGTCGAAGGGTTCATGGACAGGTGTTTCGACATGGGTTTGAGTCCAATGTGGTTGTGCAGAATAGTTTGGTGGCGTTTTATGCCAAATGTGGGAGGGTGGATCGCGCTAGGATTGTGTTTGATGGGTTGGGTGAGAGGTCGATTGTTTCGTGGACTTCCATCATTTCAGGGTATGCGCAGAATGGGGAGTGTTTGGAAGCTTTGAGGATTTTTGGTTTGATGAGGAAGGTGAATGTGAAACCTGATTGGATTGTTTTGGTTAGTGTACTGAAAGCGTATACGGATGTGGAGGACTTGGGACAGGGGAGATCTGTTCATGGTTGTTTGGTTAAAATGGGTCTTGAGTTTGAGCCTGACTTGGTCATTTCGCTCACGGCCATGTATGCGAAAAGTGGGCAGGTGATGGTTGCCAGATCATTATTTGATAAGATGGAAAGACCGAATGTGATAATGTGGAATGCTATGATTTCTGGGTATGCCAAGAATGGTCATGCTGAGAAAGCTGTGGAGCTATTCCGTGAGATGATCTCTAGAAGCATTAGAATTGATTCAATTACTCTGAGGTCTGCTATTGTAGCATGCGCTCAGGTCGGTTCTCTTGAATTAGCAAAATGGATGGATGGCTATGTCTGCAAAAGTGAGTATAGAAATCATGTTTTTGTTAATACATCCCTAATTGATATGTATGCAAAATGTGGAAGTGTAGATTCTGCTCGCATGGTCTTTGATAGAACACCTAATAAAGATGTTGTCGTCTGGAGTGCAATGATTGTGGGCTATGGATTGCATGGTCGAGGACGAGAAGCTATTGATGTTTACCATTCTATGCAGCATGCTGGGGTGGTACCAAATGATGTTACCTTTCTTGGACTCCTTACTGCATGCAACCATTCAGGCCTTGTACATGAGGGATGGGAGCTTTTCCATCGCATGAGAGACTATGGGATTGAGCCTGGAAACCATCACTATTCTTGTGTGGTTGATCTTCTGGGACGTGCAGGCCAGCTGGAACAGGCTTATGATTTTATAAAGAAGATGCCTATTGAACCTGGTACAAGTGTATGGGGAGCACTCCTTAGTTCGTGCAAGATTCATCGCAATGTGACTTTGGGACAATATGCTGCAGAAAAGCTTTTGTCATTAGATCCATATGAGATAGGGCATTATGTGCAACTGTCGAATCTCTTTGCTTCAGCCAGATTATGGGATCGTGTTGCACAGGTGCGAGTACTGATGAGGGAGAAAGGACTGATCAAGGGCATTGGCCATAGTTTGATTGAGATTAATGGTAAACTACAAGCATTTCATGTAGGAGACAAGTCGCATCCAAGGTCTGAGGAAATTTATGAAGAGCTTGAGAGTCTAGAGAGGAGGTTGAAGGAGGCTGGATTTGTTCCTCATACAGAATCCGTCCTGCATGACTTAAATTATGAAGAGACAGAGGAGACACTTTGCAATCATAGTGAGAGGCTGGCAATTGTCACTAAATTTTCTTTGCTATACATTGAATGCTGTGAAGAAAGGTGCAGTAGAGTACATAAAGCAGCAGTACCTGTTGTTACAGATCTGAGACAGATGTATTGCCAGGCTGAAGCTGGTGCCATTGTCACCTTGCTTTCCAGGCTAGGTGACCCTTTGTGA

Protein Analysis

579

Amino Acids

64.57

Weight (kDa)

6.55

Isoelectric Point (pI)

39.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 79 - 124 3.6e-07 PPR repeat family
PPR PF01535 81 - 109 4.2e-07 PPR repeat
PPR_2 PF13041 179 - 227 1.8e-12 PPR repeat family
PPR_1 PF12854 179 - 207 9.8e-09 PPR repeat
PPR PF01535 182 - 211 1.9e-10 PPR repeat
PPR_2 PF13041 280 - 327 9.5e-10 PPR repeat family
E_motif PF20431 397 - 459 1.8e-11 E motif
Eplus_motif PF20430 467 - 491 1.1e-08 E+ motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0017162)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G12770
fragaria_vesca FvH4_6g08230
malus_domestica MD09G1101900.v1.1
prunus_persica Prupe.3G223800_v2.0.a1
pyrus_communis pycom09g02560
rosa_chinensis RchiOBHm_Chr3g0458151
rosa_multiflora Rmu_co8353983.1_g000001
rosa_roxburghii Rroxscaffold_6G00421260
rosa_rugosa Rorug03G0025100
rosa_samantha Rh3AG085800 Rh3BG088500 Rh3DG089500
rosa_wichuraiana Rw3G007290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1124
AarI CACCTGC 1 cut(s) 484
Acc16I TGCGCA 1 cut(s) 273
Acc36I ACCTGC 1 cut(s) 484
Acc65I GGTACC 1 cut(s) 940
AccB1I GGYRCC 2 cut(s) 940, 1694
AccB7I CCANNNNNTGG 1 cut(s) 1299
AccI GTMKAC 1 cut(s) 374
AccII CGCG 1 cut(s) 201
AccIII TCCGGA 1 cut(s) 34
AciI CCGC 3 cut(s) 72, 75, 86
AclWI GGATC 3 cut(s) 204, 1235, 1311
AcoI YGGCCR 2 cut(s) 471, 1360
AcsI RAATTY 2 cut(s) 1437, 1583
AcuI CTGAAG 2 cut(s) 1272, 1707
AfaI GTAC 7 cut(s) 363, 942, 999, 1150, 1326, 1632, 1647
AfiI CCNNNNNNNGG 3 cut(s) 75, 186, 1299
AgsI TTSAA 5 cut(s) 648, 698, 1142, 1474, 1604
AjiI CACGTC 1 cut(s) 1091
AjnI CCWGG 4 cut(s) 1048, 1144, 1680, 1715
AluBI AGCT 9 cut(s) 296, 599, 607, 902, 1015, 1102, 1228, 1450, 1691
AluI AGCT 9 cut(s) 296, 599, 607, 902, 1015, 1102, 1228, 1450, 1691
Alw21I GWGCWC 2 cut(s) 63, 1168
Alw26I GTCTC 5 cut(s) 1026, 1404, 1526, 1535, 1660
AlwI GGATC 3 cut(s) 204, 1235, 1311
AlwNI CAGNNNCTG 1 cut(s) 1649
Aor13HI TCCGGA 1 cut(s) 34
AoxI GGCC 4 cut(s) 471, 991, 1096, 1360
ApeKI GCWGC 3 cut(s) 925, 1217, 1640
ApoI RAATTY 2 cut(s) 1437, 1583
ArsI GACNNNNNNTTYG 2 cut(s) 105, 137
AseI ATTAAT 1 cut(s) 1380
Asp700I GAANNNNTTC 1 cut(s) 643
Asp718I GGTACC 1 cut(s) 940
AspLEI GCGC 3 cut(s) 203, 274, 680
AspS9I GGNCC 1 cut(s) 32
AsuHPI GGTGA 5 cut(s) 239, 337, 508, 1696, 1736
AvaII GGWCC 1 cut(s) 32
BaeI ACNNNNGTAYC 2 cut(s) 1140, 1173
BalI TGGCCA 1 cut(s) 1362
BanI GGYRCC 2 cut(s) 940, 1694
Bbv12I GWGCWC 2 cut(s) 63, 1168
BbvI GCAGC 3 cut(s) 937, 1204, 1652
BceAI ACGGC 1 cut(s) 486
BciT130I CCWGG 4 cut(s) 1050, 1146, 1682, 1717
BclI TGATCA 1 cut(s) 1347
BcoDI GTCTC 5 cut(s) 1026, 1404, 1526, 1535, 1660
BfaI CTAG 4 cut(s) 204, 627, 1460, 1721
BfmI CTRYAG 1 cut(s) 1218
BfuAI ACCTGC 1 cut(s) 484
BglII AGATCT 2 cut(s) 404, 1660
BisI GCNGC 4 cut(s) 73, 926, 1218, 1641
BlsI GCNGC 4 cut(s) 74, 927, 1219, 1642
BmcAI AGTACT 1 cut(s) 1326
Bme1390I CCNGG 4 cut(s) 1050, 1146, 1682, 1717
Bme18I GGWCC 1 cut(s) 32
BmgBI CACGTC 1 cut(s) 1091
BmgT120I GGNCC 1 cut(s) 32
BmiI GGNNCC 3 cut(s) 33, 942, 1696
BmrFI CCNGG 4 cut(s) 1050, 1146, 1682, 1717
BmsI GCATC 3 cut(s) 3, 1122, 1429
BplI GAGNNNNNCTC 2 cut(s) 608, 640
BpmI CTGGAG 1 cut(s) 874
Bpu10I CCTNAGC 1 cut(s) 681
BpuEI CTTGAG 2 cut(s) 458, 1472
BsaJI CCNNGG 1 cut(s) 1424
BsaWI WCCGGW 1 cut(s) 34
Bsc4I CCNNNNNNNGG 3 cut(s) 75, 186, 1299
Bse3DI GCAATG 2 cut(s) 867, 1201
BseAI TCCGGA 1 cut(s) 34
BseBI CCWGG 4 cut(s) 1050, 1146, 1682, 1717
BseDI CCNNGG 1 cut(s) 1424
BseGI GGATG 8 cut(s) 18, 43, 385, 717, 721, 764, 1013, 1420
BseLI CCNNNNNNNGG 3 cut(s) 75, 186, 1299
BseMI GCAATG 2 cut(s) 867, 1201
BseMII CTCAG 5 cut(s) 582, 647, 695, 1422, 1655
BseRI GAGGAG 2 cut(s) 1480, 1553
BseXI GCAGC 3 cut(s) 937, 1204, 1652
BseYI CCCAGC 1 cut(s) 932
BsgI GTGCAG 3 cut(s) 173, 1113, 1642
Bsh1236I CGCG 1 cut(s) 201
BshFI GGCC 4 cut(s) 473, 993, 1098, 1362
BshNI GGYRCC 2 cut(s) 940, 1694
BsiHKAI GWGCWC 2 cut(s) 63, 1168
BsiSI CCGG 1 cut(s) 35
BslFI GGGAC 3 cut(s) 408, 1101, 1221
BslI CCNNNNNNNGG 3 cut(s) 75, 186, 1299
BsmAI GTCTC 5 cut(s) 1026, 1404, 1526, 1535, 1660
BsmFI GGGAC 3 cut(s) 408, 1101, 1221
BsmI GAATGC 2 cut(s) 559, 1610
BsnI GGCC 4 cut(s) 473, 993, 1098, 1362
Bsp1286I GDGCHC 2 cut(s) 63, 1168
Bsp13I TCCGGA 1 cut(s) 34
Bsp1407I TGTACA 1 cut(s) 997
Bsp143I GATC 9 cut(s) 196, 404, 509, 621, 1078, 1240, 1303, 1347, 1660
BspACI CCGC 3 cut(s) 72, 75, 86
BspANI GGCC 4 cut(s) 473, 993, 1098, 1362
BspCNI CTCAG 5 cut(s) 583, 648, 694, 1423, 1656
BspEI TCCGGA 1 cut(s) 34
BspFNI CGCG 1 cut(s) 201
BspLI GGNNCC 3 cut(s) 33, 942, 1696
BspMAI CTGCAG 1 cut(s) 1222
BspMI ACCTGC 1 cut(s) 484
BspPI GGATC 3 cut(s) 204, 1235, 1311
BspQI GCTCTTC 1 cut(s) 1440
BspT107I GGYRCC 2 cut(s) 940, 1694
BsrDI GCAATG 2 cut(s) 867, 1201
BsrGI TGTACA 1 cut(s) 997
BssECI CCNNGG 1 cut(s) 1424
BssMI GATC 9 cut(s) 196, 404, 509, 621, 1078, 1240, 1303, 1347, 1660
BssNAI GTATAC 1 cut(s) 375
BssT1I CCWWGG 1 cut(s) 1424
Bst1107I GTATAC 1 cut(s) 375
Bst2UI CCWGG 4 cut(s) 1050, 1146, 1682, 1717
Bst4CI ACNGT 1 cut(s) 1272
Bst6I CTCTTC 2 cut(s) 1440, 1524
BstAPI GCANNNNNTGC 1 cut(s) 1264
BstAUI TGTACA 1 cut(s) 997
BstC8I GCNNGC 8 cut(s) 70, 676, 811, 930, 979, 1096, 1100, 1569
BstDEI CTNAG 6 cut(s) 591, 656, 681, 1172, 1431, 1664
BstEII GGTNACC 1 cut(s) 1724
BstF5I GGATG 8 cut(s) 18, 43, 385, 717, 721, 764, 1013, 1420
BstFNI CGCG 1 cut(s) 201
BstHHI GCGC 3 cut(s) 203, 274, 680
BstKTI GATC 9 cut(s) 199, 407, 512, 624, 1081, 1243, 1306, 1350, 1663
BstMAI GTCTC 5 cut(s) 1026, 1404, 1526, 1535, 1660
BstMBI GATC 9 cut(s) 196, 404, 509, 621, 1078, 1240, 1303, 1347, 1660
BstMWI GCNNNNNNNGC 7 cut(s) 176, 479, 596, 671, 726, 1264, 1717
BstNI CCWGG 4 cut(s) 1050, 1146, 1682, 1717
BstNSI RCATGY 3 cut(s) 678, 932, 981
BstPI GGTNACC 1 cut(s) 1724
BstSCI CCNGG 4 cut(s) 1048, 1144, 1680, 1715
BstSFI CTRYAG 1 cut(s) 1218
BstUI CGCG 1 cut(s) 201
BstV1I GCAGC 3 cut(s) 937, 1204, 1652
BstX2I RGATCY 3 cut(s) 404, 1240, 1660
BstYI RGATCY 3 cut(s) 404, 1240, 1660
BstZ17I GTATAC 1 cut(s) 375
BsuRI GGCC 4 cut(s) 473, 993, 1098, 1362
BtgZI GCGATG 2 cut(s) 1007, 1175
BtrI CACGTC 1 cut(s) 1091
BtsCI GGATG 8 cut(s) 18, 43, 385, 717, 721, 764, 1013, 1420
BveI ACCTGC 1 cut(s) 484
Cac8I GCNNGC 8 cut(s) 70, 676, 811, 930, 979, 1096, 1100, 1569
CaiI CAGNNNCTG 1 cut(s) 1649
CfoI GCGC 3 cut(s) 203, 274, 680
Cfr13I GGNCC 1 cut(s) 32
CsiI ACCWGGT 1 cut(s) 1144
Csp6I GTAC 7 cut(s) 362, 941, 998, 1149, 1325, 1631, 1646
CspCI CAANNNNNGTGG 2 cut(s) 849, 884
CviQI GTAC 7 cut(s) 362, 941, 998, 1149, 1325, 1631, 1646
DdeI CTNAG 6 cut(s) 591, 656, 681, 1172, 1431, 1664
DpnI GATC 9 cut(s) 198, 406, 511, 623, 1080, 1242, 1305, 1349, 1662
DpnII GATC 9 cut(s) 196, 404, 509, 621, 1078, 1240, 1303, 1347, 1660
EaeI YGGCCR 2 cut(s) 471, 1360
Eam1104I CTCTTC 2 cut(s) 1440, 1524
EarI CTCTTC 2 cut(s) 1440, 1524
Eco130I CCWWGG 1 cut(s) 1424
Eco147I AGGCCT 1 cut(s) 993
Eco47I GGWCC 1 cut(s) 32
Eco57I CTGAAG 2 cut(s) 1272, 1707
Eco91I GGTNACC 1 cut(s) 1724
EcoO65I GGTNACC 1 cut(s) 1724
EcoRII CCWGG 4 cut(s) 1048, 1144, 1680, 1715
EcoT14I CCWWGG 1 cut(s) 1424
ErhI CCWWGG 1 cut(s) 1424
FaqI GGGAC 3 cut(s) 408, 1101, 1221
FauI CCCGC 1 cut(s) 68
FauNDI CATATG 1 cut(s) 1246
FbaI TGATCA 1 cut(s) 1347
FblI GTMKAC 1 cut(s) 374
Fnu4HI GCNGC 4 cut(s) 73, 926, 1218, 1641
FokI GGATG 8 cut(s) 25, 50, 392, 724, 728, 751, 1020, 1407
Fsp4HI GCNGC 4 cut(s) 73, 926, 1218, 1641
FspBI CTAG 4 cut(s) 204, 627, 1460, 1721
FspI TGCGCA 1 cut(s) 273
GlaI GCGC 3 cut(s) 202, 273, 679
GluI GCNGC 4 cut(s) 73, 926, 1218, 1641
GsaI CCCAGC 1 cut(s) 936
GsuI CTGGAG 1 cut(s) 874
HaeIII GGCC 4 cut(s) 473, 993, 1098, 1362
HapII CCGG 1 cut(s) 35
HhaI GCGC 3 cut(s) 203, 274, 680
Hin6I GCGC 3 cut(s) 201, 272, 678
HinP1I GCGC 3 cut(s) 201, 272, 678
HindIII AAGCTT 2 cut(s) 294, 1226
HinfI GANTC 8 cut(s) 137, 644, 803, 966, 1186, 1276, 1456, 1502
HpaII CCGG 1 cut(s) 35
HphI GGTGA 5 cut(s) 239, 337, 508, 1696, 1736
Hpy166II GTNNAC 5 cut(s) 249, 362, 375, 913, 1388
Hpy188I TCNGA 3 cut(s) 657, 1432, 1665
Hpy188III TCNNGA 6 cut(s) 35, 437, 627, 695, 853, 1460
Hpy8I GTNNAC 5 cut(s) 249, 362, 375, 913, 1388
HpyAV CCTTC 3 cut(s) 96, 316, 1468
HpyCH4III ACNGT 1 cut(s) 1272
HpyCH4IV ACGT 1 cut(s) 1090
HpyF10VI GCNNNNNNNGC 7 cut(s) 176, 479, 596, 671, 726, 1264, 1717
HpyF3I CTNAG 6 cut(s) 591, 656, 681, 1172, 1431, 1664
HpySE526I ACGT 1 cut(s) 1090
HspAI GCGC 3 cut(s) 201, 272, 678
Kpn2I TCCGGA 1 cut(s) 34
KpnI GGTACC 1 cut(s) 944
Ksp22I TGATCA 1 cut(s) 1347
Kzo9I GATC 9 cut(s) 196, 404, 509, 621, 1078, 1240, 1303, 1347, 1660
LguI GCTCTTC 1 cut(s) 1440
LmnI GCTCC 3 cut(s) 604, 1012, 1163
Lsp1109I GCAGC 3 cut(s) 937, 1204, 1652
LweI GCATC 3 cut(s) 3, 1122, 1429
MabI ACCWGGT 1 cut(s) 1144
MaeI CTAG 4 cut(s) 204, 627, 1460, 1721
MaeII ACGT 1 cut(s) 1090
MaeIII GTNAC 6 cut(s) 952, 1198, 1576, 1654, 1702, 1724
MalI GATC 9 cut(s) 198, 406, 511, 623, 1080, 1242, 1305, 1349, 1662
MboI GATC 9 cut(s) 196, 404, 509, 621, 1078, 1240, 1303, 1347, 1660
MboII GAAGA 5 cut(s) 1073, 1141, 1457, 1541, 1625
MfeI CAATTG 1 cut(s) 1572
MflI RGATCY 3 cut(s) 404, 1240, 1660
MhlI GDGCHC 2 cut(s) 63, 1168
MlsI TGGCCA 1 cut(s) 1362
MluCI AATT 8 cut(s) 639, 648, 698, 771, 1437, 1522, 1572, 1583
MluNI TGGCCA 1 cut(s) 1362
MlyI GAGTC 3 cut(s) 146, 960, 1465
Mox20I TGGCCA 1 cut(s) 1362
MroI TCCGGA 1 cut(s) 34
MroXI GAANNNNTTC 1 cut(s) 643
MscI TGGCCA 1 cut(s) 1362
MseI TTAA 4 cut(s) 426, 759, 1380, 1520
MslI CAYNNNNRTG 2 cut(s) 473, 1194
Msp20I TGGCCA 1 cut(s) 1362
MspA1I CMGCKG 1 cut(s) 1102
MspI CCGG 1 cut(s) 35
MspR9I CCNGG 4 cut(s) 1050, 1146, 1682, 1717
MunI CAATTG 1 cut(s) 1572
Mva1269I GAATGC 2 cut(s) 559, 1610
MvaI CCWGG 4 cut(s) 1050, 1146, 1682, 1717
MvnI CGCG 1 cut(s) 201
MwoI GCNNNNNNNGC 7 cut(s) 176, 479, 596, 671, 726, 1264, 1717
NdeI CATATG 1 cut(s) 1246
NdeII GATC 9 cut(s) 196, 404, 509, 621, 1078, 1240, 1303, 1347, 1660
NlaIV GGNNCC 3 cut(s) 33, 942, 1696
NmuCI GTSAC 4 cut(s) 1198, 1576, 1702, 1724
NsbI TGCGCA 1 cut(s) 273
NspI RCATGY 3 cut(s) 678, 932, 981
PaeI GCATGC 3 cut(s) 678, 932, 981
PaqCI CACCTGC 1 cut(s) 484
PceI AGGCCT 1 cut(s) 993
PciSI GCTCTTC 1 cut(s) 1440
PcsI WCGNNNNNNNCGW 1 cut(s) 242
PctI GAATGC 2 cut(s) 559, 1610
PdmI GAANNNNTTC 1 cut(s) 643
PfeI GAWTC 5 cut(s) 644, 803, 1186, 1276, 1502
PflFI GACNNNGTC 1 cut(s) 455
PflMI CCANNNNNTGG 1 cut(s) 1299
PkrI GCNGC 4 cut(s) 74, 927, 1219, 1642
PleI GAGTC 3 cut(s) 145, 960, 1464
PpsI GAGTC 3 cut(s) 145, 960, 1464
PshBI ATTAAT 1 cut(s) 1380
PsiI TTATAA 1 cut(s) 1124
Psp6I CCWGG 4 cut(s) 1048, 1144, 1680, 1715
PspEI GGTNACC 1 cut(s) 1724
PspFI CCCAGC 1 cut(s) 932
PspGI CCWGG 4 cut(s) 1048, 1144, 1680, 1715
PspN4I GGNNCC 3 cut(s) 33, 942, 1696
PspPI GGNCC 1 cut(s) 32
PstI CTGCAG 1 cut(s) 1222
PstNI CAGNNNCTG 1 cut(s) 1649
PsuI RGATCY 3 cut(s) 404, 1240, 1660
PsyI GACNNNGTC 1 cut(s) 455
PvuII CAGCTG 1 cut(s) 1102
RsaI GTAC 7 cut(s) 363, 942, 999, 1150, 1326, 1632, 1647
RsaNI GTAC 7 cut(s) 362, 941, 998, 1149, 1325, 1631, 1646
RseI CAYNNNNRTG 2 cut(s) 473, 1194
SapI GCTCTTC 1 cut(s) 1440
SaqAI TTAA 4 cut(s) 426, 759, 1380, 1520
SatI GCNGC 4 cut(s) 73, 926, 1218, 1641
Sau3AI GATC 9 cut(s) 196, 404, 509, 621, 1078, 1240, 1303, 1347, 1660
Sau96I GGNCC 1 cut(s) 32
ScaI AGTACT 1 cut(s) 1326
SchI GAGTC 3 cut(s) 146, 960, 1465
ScrFI CCNGG 4 cut(s) 1050, 1146, 1682, 1717
SduI GDGCHC 2 cut(s) 63, 1168
SexAI ACCWGGT 1 cut(s) 1144
SfaNI GCATC 3 cut(s) 3, 1122, 1429
SfcI CTRYAG 1 cut(s) 1218
SinI GGWCC 1 cut(s) 32
SmiMI CAYNNNNRTG 2 cut(s) 473, 1194
SmlI CTYRAG 2 cut(s) 437, 1451
SmoI CTYRAG 2 cut(s) 437, 1451
SphI GCATGC 3 cut(s) 678, 932, 981
Sse9I AATT 8 cut(s) 639, 648, 698, 771, 1437, 1522, 1572, 1583
SseBI AGGCCT 1 cut(s) 993
SsiI CCGC 3 cut(s) 72, 75, 86
SspMI CTAG 4 cut(s) 204, 627, 1460, 1721
StuI AGGCCT 1 cut(s) 993
StyD4I CCNGG 4 cut(s) 1048, 1144, 1680, 1715
StyI CCWWGG 1 cut(s) 1424
TaaI ACNGT 1 cut(s) 1272
TaiI ACGT 1 cut(s) 1093
TaqI TCGA 5 cut(s) 100, 124, 236, 889, 1274
TaqII GACCGA 1 cut(s) 550
TasI AATT 8 cut(s) 639, 648, 698, 771, 1437, 1522, 1572, 1583
TatI WGTACW 4 cut(s) 361, 997, 1324, 1630
TauI GCSGC 1 cut(s) 75
TfiI GAWTC 5 cut(s) 644, 803, 1186, 1276, 1502
Tru1I TTAA 4 cut(s) 426, 759, 1380, 1520
Tru9I TTAA 4 cut(s) 426, 759, 1380, 1520
TseFI GTSAC 4 cut(s) 1198, 1576, 1702, 1724
TseI GCWGC 3 cut(s) 925, 1217, 1640
Tsp45I GTSAC 4 cut(s) 1198, 1576, 1702, 1724
TspDTI ATGAA 6 cut(s) 98, 401, 1178, 1391, 1458, 1542
TspGWI ACGGA 3 cut(s) 392, 602, 1495
Tth111I GACNNNGTC 1 cut(s) 455
Van91I CCANNNNNTGG 1 cut(s) 1299
VpaK11BI GGWCC 1 cut(s) 32
VspI ATTAAT 1 cut(s) 1380
XapI RAATTY 2 cut(s) 1437, 1583
XbaI TCTAGA 2 cut(s) 626, 1459
XceI RCATGY 3 cut(s) 678, 932, 981
XcmI CCANNNNNNNNNTGG 1 cut(s) 1688
XmiI GTMKAC 1 cut(s) 374
XmnI GAANNNNTTC 1 cut(s) 643
XspI CTAG 4 cut(s) 204, 627, 1460, 1721
ZrmI AGTACT 1 cut(s) 1326
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.