BEST Arabidopsis thaliana protein match is hAT transposon superfamily protein (TAIR
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G13010 AT3G13020 AT3G13030 AT3G13030 AT3G13030 AT3G13030 AT3G13030 |
| fragaria_vesca | FvH4_6g36422 |
| malus_domestica | MD09G1169400.v1.1 |
| pyrus_communis | pycom09g08680 |
| rosa_chinensis | RchiOBHm_Chr2g0148401 |
| rosa_laevigata | RLG00000020348 |
| rosa_roxburghii | Rroxscaffold_2G00098760 |
| rosa_rugosa | Rorug02G0406800 |
| rosa_samantha | Rh2AG465500 Rh2BG478400 Rh2BG478500 Rh2CG452000 Rh2DG487200 Rh2DG487300 |
| rosa_wichuraiana | Rw2G037940 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1626 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 791 |
| AccII | CGCG | 1 cut(s) | 1076 |
| AciI | CCGC | 2 cut(s) | 434, 602 |
| AcoI | YGGCCR | 1 cut(s) | 1431 |
| AcsI | RAATTY | 5 cut(s) | 922, 1082, 1210, 1293, 1440 |
| AcuI | CTGAAG | 1 cut(s) | 1502 |
| AcyI | GRCGYC | 1 cut(s) | 821 |
| AfaI | GTAC | 5 cut(s) | 315, 976, 1316, 1412, 1475 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 573, 945 |
| AflIII | ACRYGT | 1 cut(s) | 1454 |
| Alw21I | GWGCWC | 1 cut(s) | 263 |
| Alw26I | GTCTC | 3 cut(s) | 116, 687, 799 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1546 |
| AoxI | GGCC | 2 cut(s) | 397, 1431 |
| ApeKI | GCWGC | 2 cut(s) | 363, 1169 |
| ApoI | RAATTY | 5 cut(s) | 922, 1082, 1210, 1293, 1440 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 758, 963 |
| AsuHPI | GGTGA | 5 cut(s) | 16, 593, 602, 676, 940 |
| BalI | TGGCCA | 1 cut(s) | 1433 |
| BanII | GRGCYC | 2 cut(s) | 263, 1396 |
| Bbv12I | GWGCWC | 1 cut(s) | 263 |
| BbvI | GCAGC | 2 cut(s) | 375, 1156 |
| BccI | CCATC | 4 cut(s) | 230, 241, 279, 1224 |
| BceAI | ACGGC | 2 cut(s) | 384, 1096 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 470, 504 |
| BciVI | GTATCC | 1 cut(s) | 649 |
| BclI | TGATCA | 1 cut(s) | 1357 |
| BcoDI | GTCTC | 3 cut(s) | 116, 687, 799 |
| BfaI | CTAG | 2 cut(s) | 503, 836 |
| BfmI | CTRYAG | 2 cut(s) | 231, 1421 |
| BfuI | GTATCC | 1 cut(s) | 649 |
| BglII | AGATCT | 1 cut(s) | 17 |
| BisI | GCNGC | 2 cut(s) | 364, 1170 |
| BlpI | GCTNAGC | 1 cut(s) | 1492 |
| BlsI | GCNGC | 2 cut(s) | 365, 1171 |
| BmsI | GCATC | 8 cut(s) | 193, 289, 350, 367, 375, 1036, 1156, 1552 |
| BpmI | CTGGAG | 1 cut(s) | 1362 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1492 |
| BpuEI | CTTGAG | 1 cut(s) | 275 |
| BsaHI | GRCGYC | 1 cut(s) | 821 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 573, 945 |
| Bse1I | ACTGG | 3 cut(s) | 1243, 1372, 1408 |
| BseGI | GGATG | 8 cut(s) | 52, 92, 208, 290, 365, 382, 1126, 1555 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 573, 945 |
| BseMII | CTCAG | 4 cut(s) | 759, 795, 1436, 1525 |
| BseNI | ACTGG | 3 cut(s) | 1243, 1372, 1408 |
| BseRI | GAGGAG | 5 cut(s) | 787, 790, 928, 972, 1240 |
| BseXI | GCAGC | 2 cut(s) | 375, 1156 |
| Bsh1236I | CGCG | 1 cut(s) | 1076 |
| BshFI | GGCC | 2 cut(s) | 399, 1433 |
| BsiHKAI | GWGCWC | 1 cut(s) | 263 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 573, 945 |
| BsmAI | GTCTC | 3 cut(s) | 116, 687, 799 |
| BsnI | GGCC | 2 cut(s) | 399, 1433 |
| Bsp1286I | GDGCHC | 2 cut(s) | 263, 1396 |
| Bsp1407I | TGTACA | 2 cut(s) | 974, 1314 |
| Bsp143I | GATC | 7 cut(s) | 17, 319, 351, 403, 766, 1357, 1362 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1492 |
| Bsp68I | TCGCGA | 1 cut(s) | 1076 |
| BspACI | CCGC | 2 cut(s) | 434, 602 |
| BspANI | GGCC | 2 cut(s) | 399, 1433 |
| BspCNI | CTCAG | 4 cut(s) | 758, 796, 1437, 1524 |
| BspFNI | CGCG | 1 cut(s) | 1076 |
| BspHI | TCATGA | 2 cut(s) | 271, 607 |
| BspMAI | CTGCAG | 1 cut(s) | 1425 |
| BsrGI | TGTACA | 2 cut(s) | 974, 1314 |
| BsrI | ACTGG | 3 cut(s) | 1243, 1372, 1408 |
| BssMI | GATC | 7 cut(s) | 17, 319, 351, 403, 766, 1357, 1362 |
| BssNI | GRCGYC | 1 cut(s) | 821 |
| Bst4CI | ACNGT | 5 cut(s) | 232, 793, 906, 955, 995 |
| Bst6I | CTCTTC | 3 cut(s) | 1167, 1478, 1605 |
| BstACI | GRCGYC | 1 cut(s) | 821 |
| BstAUI | TGTACA | 2 cut(s) | 974, 1314 |
| BstC8I | GCNNGC | 1 cut(s) | 1405 |
| BstDEI | CTNAG | 5 cut(s) | 745, 804, 1445, 1492, 1511 |
| BstF5I | GGATG | 8 cut(s) | 52, 92, 208, 290, 365, 382, 1126, 1555 |
| BstFNI | CGCG | 1 cut(s) | 1076 |
| BstKTI | GATC | 7 cut(s) | 20, 322, 354, 406, 769, 1360, 1365 |
| BstMAI | GTCTC | 3 cut(s) | 116, 687, 799 |
| BstMBI | GATC | 7 cut(s) | 17, 319, 351, 403, 766, 1357, 1362 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 203, 878, 1352, 1400 |
| BstNSI | RCATGY | 2 cut(s) | 561, 1458 |
| BstSFI | CTRYAG | 2 cut(s) | 231, 1421 |
| BstUI | CGCG | 1 cut(s) | 1076 |
| BstV1I | GCAGC | 2 cut(s) | 375, 1156 |
| BstX2I | RGATCY | 1 cut(s) | 17 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1386 |
| BstYI | RGATCY | 1 cut(s) | 17 |
| BsuI | GTATCC | 1 cut(s) | 649 |
| BsuRI | GGCC | 2 cut(s) | 399, 1433 |
| BtsCI | GGATG | 8 cut(s) | 52, 92, 208, 290, 365, 382, 1126, 1555 |
| BtsI | GCAGTG | 1 cut(s) | 486 |
| BtsIMutI | CAGTG | 6 cut(s) | 486, 776, 911, 1236, 1365, 1519 |
| BtuMI | TCGCGA | 1 cut(s) | 1076 |
| Cac8I | GCNNGC | 1 cut(s) | 1405 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1546 |
| CciI | TCATGA | 2 cut(s) | 271, 607 |
| CseI | GACGC | 1 cut(s) | 829 |
| Csp6I | GTAC | 5 cut(s) | 314, 975, 1315, 1411, 1474 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 146, 181, 1288, 1323 |
| CviAII | CATG | 8 cut(s) | 210, 272, 558, 608, 776, 874, 1166, 1455 |
| CviQI | GTAC | 5 cut(s) | 314, 975, 1315, 1411, 1474 |
| DdeI | CTNAG | 5 cut(s) | 745, 804, 1445, 1492, 1511 |
| DpnI | GATC | 7 cut(s) | 19, 321, 353, 405, 768, 1359, 1364 |
| DpnII | GATC | 7 cut(s) | 17, 319, 351, 403, 766, 1357, 1362 |
| DraI | TTTAAA | 2 cut(s) | 279, 475 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 791 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 791 |
| EaeI | YGGCCR | 1 cut(s) | 1431 |
| Eam1104I | CTCTTC | 3 cut(s) | 1167, 1478, 1605 |
| EarI | CTCTTC | 3 cut(s) | 1167, 1478, 1605 |
| Ecl136II | GAGCTC | 1 cut(s) | 261 |
| Eco24I | GRGCYC | 2 cut(s) | 263, 1396 |
| Eco32I | GATATC | 1 cut(s) | 453 |
| Eco53kI | GAGCTC | 1 cut(s) | 261 |
| Eco57I | CTGAAG | 1 cut(s) | 1502 |
| EcoICRI | GAGCTC | 1 cut(s) | 261 |
| EcoRI | GAATTC | 1 cut(s) | 1082 |
| EcoRV | GATATC | 1 cut(s) | 453 |
| EcoT22I | ATGCAT | 1 cut(s) | 304 |
| EcoT38I | GRGCYC | 2 cut(s) | 263, 1396 |
| FaeI | CATG | 8 cut(s) | 213, 275, 561, 611, 779, 877, 1169, 1458 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 155, 187, 848, 880, 1475, 1507 |
| FatI | CATG | 8 cut(s) | 209, 271, 557, 607, 775, 873, 1165, 1454 |
| FauI | CCCGC | 2 cut(s) | 427, 595 |
| FauNDI | CATATG | 1 cut(s) | 1263 |
| FbaI | TGATCA | 1 cut(s) | 1357 |
| Fnu4HI | GCNGC | 2 cut(s) | 364, 1170 |
| FokI | GGATG | 8 cut(s) | 59, 79, 215, 297, 372, 389, 1133, 1562 |
| FriOI | GRGCYC | 2 cut(s) | 263, 1396 |
| Fsp4HI | GCNGC | 2 cut(s) | 364, 1170 |
| FspBI | CTAG | 2 cut(s) | 503, 836 |
| GluI | GCNGC | 2 cut(s) | 364, 1170 |
| GsuI | CTGGAG | 1 cut(s) | 1362 |
| HaeIII | GGCC | 2 cut(s) | 399, 1433 |
| HgaI | GACGC | 1 cut(s) | 829 |
| Hin1I | GRCGYC | 1 cut(s) | 821 |
| Hin1II | CATG | 8 cut(s) | 213, 275, 561, 611, 779, 877, 1169, 1458 |
| HincII | GTYRAC | 1 cut(s) | 388 |
| HindII | GTYRAC | 1 cut(s) | 388 |
| HindIII | AAGCTT | 1 cut(s) | 1489 |
| HinfI | GANTC | 9 cut(s) | 89, 341, 544, 935, 988, 1258, 1320, 1348, 1371 |
| HphI | GGTGA | 5 cut(s) | 16, 593, 602, 676, 940 |
| Hpy166II | GTNNAC | 1 cut(s) | 388 |
| Hpy188III | TCNNGA | 8 cut(s) | 272, 296, 608, 836, 1075, 1220, 1532, 1547 |
| Hpy8I | GTNNAC | 1 cut(s) | 388 |
| HpyAV | CCTTC | 2 cut(s) | 1454, 1511 |
| HpyCH4III | ACNGT | 5 cut(s) | 232, 793, 906, 955, 995 |
| HpyCH4IV | ACGT | 2 cut(s) | 682, 1281 |
| HpyCH4V | TGCA | 6 cut(s) | 302, 363, 422, 557, 909, 1423 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 203, 878, 1352, 1400 |
| HpyF3I | CTNAG | 5 cut(s) | 745, 804, 1445, 1492, 1511 |
| HpySE526I | ACGT | 2 cut(s) | 682, 1281 |
| Hsp92I | GRCGYC | 1 cut(s) | 821 |
| Hsp92II | CATG | 8 cut(s) | 213, 275, 561, 611, 779, 877, 1169, 1458 |
| Ksp22I | TGATCA | 1 cut(s) | 1357 |
| Kzo9I | GATC | 7 cut(s) | 17, 319, 351, 403, 766, 1357, 1362 |
| Lsp1109I | GCAGC | 2 cut(s) | 375, 1156 |
| LweI | GCATC | 8 cut(s) | 193, 289, 350, 367, 375, 1036, 1156, 1552 |
| MaeI | CTAG | 2 cut(s) | 503, 836 |
| MaeII | ACGT | 2 cut(s) | 682, 1281 |
| MaeIII | GTNAC | 8 cut(s) | 409, 484, 541, 817, 932, 1175, 1234, 1277 |
| MalI | GATC | 7 cut(s) | 19, 321, 353, 405, 768, 1359, 1364 |
| MboI | GATC | 7 cut(s) | 17, 319, 351, 403, 766, 1357, 1362 |
| MflI | RGATCY | 1 cut(s) | 17 |
| MhlI | GDGCHC | 2 cut(s) | 263, 1396 |
| MlsI | TGGCCA | 1 cut(s) | 1433 |
| MluNI | TGGCCA | 1 cut(s) | 1433 |
| MlyI | GAGTC | 4 cut(s) | 538, 929, 1314, 1357 |
| MmeI | TCCRAC | 2 cut(s) | 354, 508 |
| Mox20I | TGGCCA | 1 cut(s) | 1433 |
| Mph1103I | ATGCAT | 1 cut(s) | 304 |
| MroXI | GAANNNNTTC | 2 cut(s) | 758, 963 |
| MscI | TGGCCA | 1 cut(s) | 1433 |
| MseI | TTAA | 6 cut(s) | 278, 336, 474, 1338, 1437, 1604 |
| MslI | CAYNNNNRTG | 2 cut(s) | 72, 1548 |
| Msp20I | TGGCCA | 1 cut(s) | 1433 |
| MspA1I | CMGCKG | 3 cut(s) | 197, 434, 1382 |
| MvnI | CGCG | 1 cut(s) | 1076 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 203, 878, 1352, 1400 |
| NdeI | CATATG | 1 cut(s) | 1263 |
| NdeII | GATC | 7 cut(s) | 17, 319, 351, 403, 766, 1357, 1362 |
| NlaIII | CATG | 8 cut(s) | 213, 275, 561, 611, 779, 877, 1169, 1458 |
| NmuCI | GTSAC | 6 cut(s) | 484, 541, 817, 932, 1234, 1277 |
| NruI | TCGCGA | 1 cut(s) | 1076 |
| NsiI | ATGCAT | 1 cut(s) | 304 |
| NspI | RCATGY | 2 cut(s) | 561, 1458 |
| PagI | TCATGA | 2 cut(s) | 271, 607 |
| PciI | ACATGT | 1 cut(s) | 1454 |
| PdmI | GAANNNNTTC | 2 cut(s) | 758, 963 |
| PfeI | GAWTC | 5 cut(s) | 89, 341, 988, 1258, 1371 |
| PflFI | GACNNNGTC | 2 cut(s) | 482, 707 |
| PkrI | GCNGC | 2 cut(s) | 365, 1171 |
| PleI | GAGTC | 4 cut(s) | 538, 929, 1314, 1356 |
| PpsI | GAGTC | 4 cut(s) | 538, 929, 1314, 1356 |
| PscI | ACATGT | 1 cut(s) | 1454 |
| PsiI | TTATAA | 1 cut(s) | 1626 |
| Psp124BI | GAGCTC | 1 cut(s) | 263 |
| PstI | CTGCAG | 1 cut(s) | 1425 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1546 |
| PsuI | RGATCY | 1 cut(s) | 17 |
| PsyI | GACNNNGTC | 2 cut(s) | 482, 707 |
| PvuII | CAGCTG | 2 cut(s) | 197, 1382 |
| RruI | TCGCGA | 1 cut(s) | 1076 |
| RsaI | GTAC | 5 cut(s) | 315, 976, 1316, 1412, 1475 |
| RsaNI | GTAC | 5 cut(s) | 314, 975, 1315, 1411, 1474 |
| RseI | CAYNNNNRTG | 2 cut(s) | 72, 1548 |
| SacI | GAGCTC | 1 cut(s) | 263 |
| SaqAI | TTAA | 6 cut(s) | 278, 336, 474, 1338, 1437, 1604 |
| SatI | GCNGC | 2 cut(s) | 364, 1170 |
| Sau3AI | GATC | 7 cut(s) | 17, 319, 351, 403, 766, 1357, 1362 |
| SchI | GAGTC | 4 cut(s) | 538, 929, 1314, 1357 |
| SduI | GDGCHC | 2 cut(s) | 263, 1396 |
| SfaNI | GCATC | 8 cut(s) | 193, 289, 350, 367, 375, 1036, 1156, 1552 |
| SfcI | CTRYAG | 2 cut(s) | 231, 1421 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 72, 1548 |
| SmlI | CTYRAG | 1 cut(s) | 254 |
| SmoI | CTYRAG | 1 cut(s) | 254 |
| SsiI | CCGC | 2 cut(s) | 434, 602 |
| SspMI | CTAG | 2 cut(s) | 503, 836 |
| SstI | GAGCTC | 1 cut(s) | 263 |
| TaaI | ACNGT | 5 cut(s) | 232, 793, 906, 955, 995 |
| TaiI | ACGT | 2 cut(s) | 685, 1284 |
| TaqI | TCGA | 1 cut(s) | 651 |
| TatI | WGTACW | 4 cut(s) | 313, 974, 1314, 1473 |
| TfiI | GAWTC | 5 cut(s) | 89, 341, 988, 1258, 1371 |
| Tru1I | TTAA | 6 cut(s) | 278, 336, 474, 1338, 1437, 1604 |
| Tru9I | TTAA | 6 cut(s) | 278, 336, 474, 1338, 1437, 1604 |
| TscAI | CASTG | 6 cut(s) | 493, 776, 911, 1243, 1372, 1519 |
| TseFI | GTSAC | 6 cut(s) | 484, 541, 817, 932, 1234, 1277 |
| TseI | GCWGC | 2 cut(s) | 363, 1169 |
| Tsp45I | GTSAC | 6 cut(s) | 484, 541, 817, 932, 1234, 1277 |
| TspDTI | ATGAA | 6 cut(s) | 81, 675, 718, 1154, 1250, 1568 |
| TspGWI | ACGGA | 1 cut(s) | 297 |
| TspRI | CASTG | 6 cut(s) | 493, 776, 911, 1243, 1372, 1519 |
| Tth111I | GACNNNGTC | 2 cut(s) | 482, 707 |
| XapI | RAATTY | 5 cut(s) | 922, 1082, 1210, 1293, 1440 |
| XbaI | TCTAGA | 1 cut(s) | 835 |
| XceI | RCATGY | 2 cut(s) | 561, 1458 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 59, 1386 |
| XmnI | GAANNNNTTC | 2 cut(s) | 758, 963 |
| XspI | CTAG | 2 cut(s) | 503, 836 |
| Zsp2I | ATGCAT | 1 cut(s) | 304 |