Rorug02G0406800

Protein of unknown function (DUF 659)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0009746
Physical Location & Seq
Forward (+)
51919334 .. 51921432
2099 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0406800.1

Sequence Viewer

Length: 1683 bp
ATGACTTACAGACTTTTCAAGGACCTGATTCAAAACAATGAAGAATTTCTTATGCAGAAAACTGGCGAAACAAAGAACTCTGTGTTGCACCTTGCTGCAAGGTTCGGTCACATTGAGCTACTTGTCTTTATCATTGAGCTACTTCCTGACTTGGTTTCTATTGGAAACGTCAAGGGTGAAACTCCGTTACACGAAACTTGTCACCAAGGGAATACCAATGTTGTGAAGCTGCTGGTAGAGGCCAATCCATATGTGATTGGGGTGTTAGACTCTGAAGACCATGAAGTTTTGAGTCCTCTTCATGTGTCTATAGCAGAAGGCTACGTTGATATTGTTCAGACTATTTTGAAAGGGTGCCCCAGGTTTGCTTGGAAGGTTGACAGCAATGGGTGTCTACCGCTGCATATAGCTTGCGAAAAAGGTCACTTAGAGATAGCAAGAACACTGTTGATGATTGATCCAGACCTTGCTCTTGAATTTGACCATTATCTTTACACACCAGTACACTTGGCTGCAATGAATGGTCAAATCAAAATCCTTGAGGAACTTCTTTTGTGCTCTCCCAAATGTTTAGCAAGGCTCACAGGAGATGGAGAAACTGTGTTTCATCTTTCAGTAGGATTCAATAGATACGCTGTGTTTACCTCTTTGGTAAAGAATTATAACAATACCTATCTCCTGATTCTCCTCAACCAGGCTGACAAGCATGGTAACACAATCTTAAATATTGCTGTCTCTGCAGGGAACATTACATTGACAGAGCACATCATCAGGAATACTACAGTTGATGTCAATTGTAGAAATCAAAGAGGTCAAACAGCAATGGATATCTTGTGCCAGCAAAGAAGAGCGTCGGATATCAGAAACATGTTGAAGAGTTTTGGTGGCAGGACGAGCACTGAGTTGTCGTCTTTAACACCAAAGATTGATGAGATAGATTATGAGACTACAACAACATCAGAAAGTCCTAGAGTTGTACTTGAGCAAGAATTTGAAATGCTTTTCGAAGGCATCGCACATCCGGGAAGTGATCAATATGATTGTGAAATTGGTACTTTCACTACTGGTATGAATCCTCCTGGTGGTGTCTACCAGGAGGACCAGCTTAAAGGACAGTCAACAGTTGGCAGAACAACAGCTTTTAAGGTCTTTGCAATATGCAACACAGCAGCACTTTTCATATCTATGTGCATTGTCAATTTGTCATTGTCTTGGTCAGCATCATTCCCTTCCGGAAAACCACTAATGAAACTACTGGTGGTTGCTCATAAAGTAATGTGGGTGGCGGTGTCACTAATGGCCACAGCTTATATCGCAGCCATGTGGATGATCATGCCACACGGTGAAGATGTAAATTGGACCCTTGAAGTAGTGATTTCTGTGTGTGCAGGGACTATGGGATCTGTTTTTTTATTCCTTGGTGTCACATGGACCAGACACTGGTTGATGAAGTTCAAGTGGAGGAAGCAGAGAGGTAAAACTACAGAGGAAAGAGCACAAAAACAAGCTGTACGAACACATCAAAGAGCACAGAAAAGAACAGAGGATACACCAGAATACAACTCATCATTATTCACCAACTCCATTGCTGGGAGTTTCGAAGAACTAGGATATCGATCATACGTACTGAACAAAGAAAAATGGAGAAATATATTGTGTTCTTCTCAATCCAATGGAACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF659 Dimer_Tnp_hAT zf-BED

Protein Analysis

560

Amino Acids

62.77

Weight (kDa)

6.23

Isoelectric Point (pI)

31.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 5 - 81 3.2e-08 Ankyrin repeats (3 copies)
Ank_2 PF12796 95 - 154 1.6e-08 Ankyrin repeats (3 copies)
Ank_5 PF13857 228 - 277 1.5e-06 Ankyrin repeats (many copies)
PGG PF13962 352 - 443 9.1e-20 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0009746)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G13010 AT3G13020 AT3G13030 AT3G13030 AT3G13030 AT3G13030 AT3G13030
fragaria_vesca FvH4_6g36422
malus_domestica MD09G1169400.v1.1
pyrus_communis pycom09g08680
rosa_chinensis RchiOBHm_Chr2g0148401
rosa_laevigata RLG00000020348
rosa_roxburghii Rroxscaffold_2G00098760
rosa_rugosa Rorug02G0406800
rosa_samantha Rh2AG465500 Rh2BG478400 Rh2BG478500 Rh2CG452000 Rh2DG487200 Rh2DG487300
rosa_wichuraiana Rw2G037940

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 663
AccB1I GGYRCC 1 cut(s) 354
AccB7I CCANNNNNTGG 1 cut(s) 1440
AccI GTMKAC 2 cut(s) 394, 1089
AccIII TCCGGA 1 cut(s) 1232
AciI CCGC 2 cut(s) 398, 1286
AclWI GGATC 2 cut(s) 452, 1408
AcoI YGGCCR 1 cut(s) 1299
AcsI RAATTY 3 cut(s) 44, 476, 989
AcuI CTGAAG 1 cut(s) 294
AdeI CACNNNGTG 1 cut(s) 1343
AfaI GTAC 5 cut(s) 504, 978, 1054, 1512, 1626
AfiI CCNNNNNNNGG 4 cut(s) 694, 1082, 1440, 1590
AflIII ACRYGT 1 cut(s) 867
AgsI TTSAA 9 cut(s) 19, 32, 349, 476, 625, 874, 995, 1367, 1456
AjnI CCWGG 4 cut(s) 359, 693, 1078, 1092
AluBI AGCT 8 cut(s) 118, 139, 229, 410, 1105, 1139, 1307, 1508
AluI AGCT 8 cut(s) 118, 139, 229, 410, 1105, 1139, 1307, 1508
Alw21I GWGCWC 5 cut(s) 560, 765, 899, 1498, 1531
Alw26I GTCTC 2 cut(s) 739, 938
AlwI GGATC 2 cut(s) 452, 1408
AlwNI CAGNNNCTG 1 cut(s) 1440
Aor13HI TCCGGA 1 cut(s) 1232
AoxI GGCC 2 cut(s) 240, 1299
ApeKI GCWGC 6 cut(s) 95, 229, 400, 512, 1169, 1316
ApoI RAATTY 3 cut(s) 44, 476, 989
Asp700I GAANNNNTTC 1 cut(s) 45
AspS9I GGNCC 4 cut(s) 22, 1099, 1359, 1431
AsuC2I CCSGG 1 cut(s) 1023
AsuHPI GGTGA 4 cut(s) 188, 194, 1355, 1567
AsuII TTCGAA 2 cut(s) 1005, 1599
AvaII GGWCC 4 cut(s) 22, 1099, 1359, 1431
BaeGI GKGCMC 1 cut(s) 359
BalI TGGCCA 1 cut(s) 1301
BanI GGYRCC 1 cut(s) 354
BbsI GAAGAC 1 cut(s) 282
Bbv12I GWGCWC 5 cut(s) 560, 765, 899, 1498, 1531
BbvI GCAGC 6 cut(s) 82, 216, 387, 499, 1181, 1328
BccI CCATC 1 cut(s) 584
BciT130I CCWGG 4 cut(s) 361, 695, 1080, 1094
BciVI GTATCC 1 cut(s) 1540
BclI TGATCA 2 cut(s) 1030, 1329
BcnI CCSGG 1 cut(s) 1023
BcoDI GTCTC 2 cut(s) 739, 938
BfaI CTAG 2 cut(s) 969, 1607
BfmI CTRYAG 4 cut(s) 309, 738, 780, 1482
BfuI GTATCC 1 cut(s) 1540
BisI GCNGC 6 cut(s) 96, 230, 401, 513, 1170, 1317
BlsI GCNGC 6 cut(s) 97, 231, 402, 514, 1171, 1318
Bme1390I CCNGG 5 cut(s) 361, 695, 1023, 1080, 1094
Bme18I GGWCC 4 cut(s) 22, 1099, 1359, 1431
BmgT120I GGNCC 4 cut(s) 22, 1099, 1359, 1431
BmiI GGNNCC 2 cut(s) 356, 1361
BmrFI CCNGG 5 cut(s) 361, 695, 1023, 1080, 1094
BmsI GCATC 2 cut(s) 1020, 1229
BpiI GAAGAC 1 cut(s) 282
Bpu14I TTCGAA 2 cut(s) 1005, 1599
BpuEI CTTGAG 2 cut(s) 560, 1001
BpuMI CCSGG 1 cut(s) 1023
Bsa29I ATCGAT 1 cut(s) 1615
BsaAI YACGTR 1 cut(s) 1624
BsaBI GATNNNNATC 1 cut(s) 1615
BsaJI CCNNGG 3 cut(s) 205, 359, 1417
BsaWI WCCGGW 1 cut(s) 1232
BsaXI ACNNNNNCTCC 2 cut(s) 585, 615
Bsc4I CCNNNNNNNGG 4 cut(s) 694, 1082, 1440, 1590
Bse1I ACTGG 5 cut(s) 67, 500, 1069, 1260, 1445
Bse3DI GCAATG 4 cut(s) 391, 522, 828, 1584
Bse8I GATNNNNATC 1 cut(s) 1615
BseAI TCCGGA 1 cut(s) 1232
BseBI CCWGG 4 cut(s) 361, 695, 1080, 1094
BseCI ATCGAT 1 cut(s) 1615
BseDI CCNNGG 3 cut(s) 205, 359, 1417
BseGI GGATG 2 cut(s) 1018, 1332
BseJI GATNNNNATC 1 cut(s) 1615
BseLI CCNNNNNNNGG 4 cut(s) 694, 1082, 1440, 1590
BseMI GCAATG 4 cut(s) 391, 522, 828, 1584
BseMII CTCAG 1 cut(s) 891
BseNI ACTGG 5 cut(s) 67, 500, 1069, 1260, 1445
BseRI GAGGAG 1 cut(s) 677
BseSI GKGCMC 1 cut(s) 359
BseXI GCAGC 6 cut(s) 82, 216, 387, 499, 1181, 1328
BseYI CCCAGC 1 cut(s) 1589
BsgI GTGCAG 1 cut(s) 1407
BshFI GGCC 2 cut(s) 242, 1301
BshNI GGYRCC 1 cut(s) 354
BshVI ATCGAT 1 cut(s) 1615
BsiHKAI GWGCWC 5 cut(s) 560, 765, 899, 1498, 1531
BsiSI CCGG 2 cut(s) 1022, 1233
BslFI GGGAC 1 cut(s) 1405
BslI CCNNNNNNNGG 4 cut(s) 694, 1082, 1440, 1590
BsmAI GTCTC 2 cut(s) 739, 938
BsmFI GGGAC 1 cut(s) 1405
BsnI GGCC 2 cut(s) 242, 1301
Bsp119I TTCGAA 2 cut(s) 1005, 1599
Bsp1286I GDGCHC 6 cut(s) 359, 560, 765, 899, 1498, 1531
Bsp13I TCCGGA 1 cut(s) 1232
Bsp143I GATC 5 cut(s) 457, 1030, 1329, 1400, 1616
BspACI CCGC 2 cut(s) 398, 1286
BspANI GGCC 2 cut(s) 242, 1301
BspCNI CTCAG 1 cut(s) 892
BspDI ATCGAT 1 cut(s) 1615
BspEI TCCGGA 1 cut(s) 1232
BspLI GGNNCC 2 cut(s) 356, 1361
BspMAI CTGCAG 1 cut(s) 742
BspPI GGATC 2 cut(s) 452, 1408
BspQI GCTCTTC 1 cut(s) 841
BspT104I TTCGAA 2 cut(s) 1005, 1599
BspT107I GGYRCC 1 cut(s) 354
BsrDI GCAATG 4 cut(s) 391, 522, 828, 1584
BsrI ACTGG 5 cut(s) 67, 500, 1069, 1260, 1445
BssECI CCNNGG 3 cut(s) 205, 359, 1417
BssMI GATC 5 cut(s) 457, 1030, 1329, 1400, 1616
BssT1I CCWWGG 2 cut(s) 205, 1417
Bst2UI CCWGG 4 cut(s) 361, 695, 1080, 1094
Bst4CI ACNGT 6 cut(s) 447, 601, 784, 1116, 1123, 1343
Bst6I CTCTTC 3 cut(s) 303, 841, 869
BstBAI YACGTR 1 cut(s) 1624
BstBI TTCGAA 2 cut(s) 1005, 1599
BstC8I GCNNGC 2 cut(s) 412, 839
BstDEI CTNAG 2 cut(s) 427, 900
BstENI CCTNNNNNAGG 1 cut(s) 692
BstF5I GGATG 2 cut(s) 1018, 1332
BstKTI GATC 5 cut(s) 460, 1033, 1332, 1403, 1619
BstMAI GTCTC 2 cut(s) 739, 938
BstMBI GATC 5 cut(s) 457, 1030, 1329, 1400, 1616
BstMWI GCNNNNNNNGC 3 cut(s) 737, 894, 1313
BstNI CCWGG 4 cut(s) 361, 695, 1080, 1094
BstNSI RCATGY 1 cut(s) 871
BstSCI CCNGG 5 cut(s) 359, 693, 1021, 1078, 1092
BstSFI CTRYAG 4 cut(s) 309, 738, 780, 1482
BstSLI GKGCMC 1 cut(s) 359
BstSNI TACGTA 1 cut(s) 1624
BstV1I GCAGC 6 cut(s) 82, 216, 387, 499, 1181, 1328
BstV2I GAAGAC 1 cut(s) 282
BstX2I RGATCY 1 cut(s) 1400
BstYI RGATCY 1 cut(s) 1400
Bsu15I ATCGAT 1 cut(s) 1615
BsuI GTATCC 1 cut(s) 1540
BsuRI GGCC 2 cut(s) 242, 1301
BsuTUI ATCGAT 1 cut(s) 1615
BtgZI GCGATG 1 cut(s) 997
BtsCI GGATG 2 cut(s) 1018, 1332
BtsIMutI CAGTG 3 cut(s) 443, 897, 1438
Cac8I GCNNGC 2 cut(s) 412, 839
CaiI CAGNNNCTG 1 cut(s) 1440
Cfr13I GGNCC 4 cut(s) 22, 1099, 1359, 1431
ClaI ATCGAT 1 cut(s) 1615
CseI GACGC 1 cut(s) 840
Csp6I GTAC 5 cut(s) 503, 977, 1053, 1511, 1625
CviAII CATG 8 cut(s) 281, 302, 707, 868, 1321, 1333, 1428, 1680
CviQI GTAC 5 cut(s) 503, 977, 1053, 1511, 1625
DdeI CTNAG 2 cut(s) 427, 900
DpnI GATC 5 cut(s) 459, 1032, 1331, 1402, 1618
DpnII GATC 5 cut(s) 457, 1030, 1329, 1400, 1616
DraIII CACNNNGTG 1 cut(s) 1343
EaeI YGGCCR 1 cut(s) 1299
Eam1104I CTCTTC 3 cut(s) 303, 841, 869
EarI CTCTTC 3 cut(s) 303, 841, 869
Eco105I TACGTA 1 cut(s) 1624
Eco130I CCWWGG 2 cut(s) 205, 1417
Eco32I GATATC 3 cut(s) 829, 859, 1613
Eco47I GGWCC 4 cut(s) 22, 1099, 1359, 1431
Eco57I CTGAAG 1 cut(s) 294
EcoNI CCTNNNNNAGG 1 cut(s) 692
EcoO109I RGGNCCY 1 cut(s) 22
EcoRII CCWGG 4 cut(s) 359, 693, 1078, 1092
EcoRV GATATC 3 cut(s) 829, 859, 1613
EcoT14I CCWWGG 2 cut(s) 205, 1417
ErhI CCWWGG 2 cut(s) 205, 1417
FaeI CATG 8 cut(s) 284, 305, 710, 871, 1324, 1336, 1431, 1683
FalI AAGNNNNNCTT 2 cut(s) 33, 65
FaqI GGGAC 1 cut(s) 1405
FatI CATG 8 cut(s) 280, 301, 706, 867, 1320, 1332, 1427, 1679
FauNDI CATATG 1 cut(s) 250
FbaI TGATCA 2 cut(s) 1030, 1329
FblI GTMKAC 2 cut(s) 394, 1089
Fnu4HI GCNGC 6 cut(s) 96, 230, 401, 513, 1170, 1317
FokI GGATG 2 cut(s) 1005, 1339
Fsp4HI GCNGC 6 cut(s) 96, 230, 401, 513, 1170, 1317
FspBI CTAG 2 cut(s) 969, 1607
GluI GCNGC 6 cut(s) 96, 230, 401, 513, 1170, 1317
GsaI CCCAGC 1 cut(s) 1593
HaeIII GGCC 2 cut(s) 242, 1301
HapII CCGG 2 cut(s) 1022, 1233
HgaI GACGC 1 cut(s) 840
Hin1II CATG 8 cut(s) 284, 305, 710, 871, 1324, 1336, 1431, 1683
HincII GTYRAC 2 cut(s) 379, 1119
HindII GTYRAC 2 cut(s) 379, 1119
HinfI GANTC 6 cut(s) 28, 269, 292, 621, 682, 1072
HpaII CCGG 2 cut(s) 1022, 1233
HphI GGTGA 4 cut(s) 188, 194, 1355, 1567
Hpy166II GTNNAC 6 cut(s) 379, 395, 505, 642, 1090, 1119
Hpy188I TCNGA 5 cut(s) 274, 339, 856, 863, 961
Hpy188III TCNNGA 6 cut(s) 146, 461, 473, 679, 772, 1233
Hpy8I GTNNAC 6 cut(s) 379, 395, 505, 642, 1090, 1119
Hpy99I CGWCG 1 cut(s) 856
HpyAV CCTTC 4 cut(s) 311, 367, 1001, 1239
HpyCH4III ACNGT 6 cut(s) 447, 601, 784, 1116, 1123, 1343
HpyCH4IV ACGT 3 cut(s) 168, 324, 1623
HpyF10VI GCNNNNNNNGC 3 cut(s) 737, 894, 1313
HpyF3I CTNAG 2 cut(s) 427, 900
HpySE526I ACGT 3 cut(s) 168, 324, 1623
Hsp92II CATG 8 cut(s) 284, 305, 710, 871, 1324, 1336, 1431, 1683
Kpn2I TCCGGA 1 cut(s) 1232
Ksp22I TGATCA 2 cut(s) 1030, 1329
Kzo9I GATC 5 cut(s) 457, 1030, 1329, 1400, 1616
LguI GCTCTTC 1 cut(s) 841
Lsp1109I GCAGC 6 cut(s) 82, 216, 387, 499, 1181, 1328
LweI GCATC 2 cut(s) 1020, 1229
MaeI CTAG 2 cut(s) 969, 1607
MaeII ACGT 3 cut(s) 168, 324, 1623
MaeIII GTNAC 7 cut(s) 107, 186, 200, 422, 710, 1290, 1423
MalI GATC 5 cut(s) 459, 1032, 1331, 1402, 1618
MboI GATC 5 cut(s) 457, 1030, 1329, 1400, 1616
MboII GAAGA 8 cut(s) 53, 287, 290, 858, 886, 1358, 1613, 1653
MfeI CAATTG 1 cut(s) 793
MflI RGATCY 1 cut(s) 1400
MhlI GDGCHC 6 cut(s) 359, 560, 765, 899, 1498, 1531
MlsI TGGCCA 1 cut(s) 1301
MluCI AATT 8 cut(s) 44, 476, 658, 793, 989, 1047, 1198, 1354
MluNI TGGCCA 1 cut(s) 1301
MlyI GAGTC 2 cut(s) 263, 301
MmeI TCCRAC 1 cut(s) 834
Mox20I TGGCCA 1 cut(s) 1301
MroI TCCGGA 1 cut(s) 1232
MroXI GAANNNNTTC 1 cut(s) 45
MscI TGGCCA 1 cut(s) 1301
MseI TTAA 4 cut(s) 722, 914, 1107, 1143
MslI CAYNNNNRTG 2 cut(s) 1184, 1325
Msp20I TGGCCA 1 cut(s) 1301
MspA1I CMGCKG 1 cut(s) 400
MspI CCGG 2 cut(s) 1022, 1233
MspR9I CCNGG 5 cut(s) 361, 695, 1023, 1080, 1094
MunI CAATTG 1 cut(s) 793
MvaI CCWGG 4 cut(s) 361, 695, 1080, 1094
MwoI GCNNNNNNNGC 3 cut(s) 737, 894, 1313
NciI CCSGG 1 cut(s) 1023
NdeI CATATG 1 cut(s) 250
NdeII GATC 5 cut(s) 457, 1030, 1329, 1400, 1616
NlaIII CATG 8 cut(s) 284, 305, 710, 871, 1324, 1336, 1431, 1683
NlaIV GGNNCC 2 cut(s) 356, 1361
NmuCI GTSAC 5 cut(s) 107, 200, 422, 1290, 1423
NspI RCATGY 1 cut(s) 871
NspV TTCGAA 2 cut(s) 1005, 1599
PciI ACATGT 1 cut(s) 867
PciSI GCTCTTC 1 cut(s) 841
PdmI GAANNNNTTC 1 cut(s) 45
PfeI GAWTC 4 cut(s) 28, 621, 682, 1072
PflMI CCANNNNNTGG 1 cut(s) 1440
PfoI TCCNGGA 1 cut(s) 1021
PkrI GCNGC 6 cut(s) 97, 231, 402, 514, 1171, 1318
PleI GAGTC 2 cut(s) 263, 300
PpsI GAGTC 2 cut(s) 263, 300
Ppu21I YACGTR 1 cut(s) 1624
PpuMI RGGWCCY 1 cut(s) 22
PscI ACATGT 1 cut(s) 867
PsiI TTATAA 1 cut(s) 663
Psp5II RGGWCCY 1 cut(s) 22
Psp6I CCWGG 4 cut(s) 359, 693, 1078, 1092
PspFI CCCAGC 1 cut(s) 1589
PspGI CCWGG 4 cut(s) 359, 693, 1078, 1092
PspN4I GGNNCC 2 cut(s) 356, 1361
PspPI GGNCC 4 cut(s) 22, 1099, 1359, 1431
PspPPI RGGWCCY 1 cut(s) 22
PsrI GAACNNNNNNTAC 2 cut(s) 1531, 1563
PstI CTGCAG 1 cut(s) 742
PstNI CAGNNNCTG 1 cut(s) 1440
PsuI RGATCY 1 cut(s) 1400
RsaI GTAC 5 cut(s) 504, 978, 1054, 1512, 1626
RsaNI GTAC 5 cut(s) 503, 977, 1053, 1511, 1625
RseI CAYNNNNRTG 2 cut(s) 1184, 1325
SapI GCTCTTC 1 cut(s) 841
SaqAI TTAA 4 cut(s) 722, 914, 1107, 1143
SatI GCNGC 6 cut(s) 96, 230, 401, 513, 1170, 1317
Sau3AI GATC 5 cut(s) 457, 1030, 1329, 1400, 1616
Sau96I GGNCC 4 cut(s) 22, 1099, 1359, 1431
SchI GAGTC 2 cut(s) 263, 301
ScrFI CCNGG 5 cut(s) 361, 695, 1023, 1080, 1094
SduI GDGCHC 6 cut(s) 359, 560, 765, 899, 1498, 1531
SfaNI GCATC 2 cut(s) 1020, 1229
SfcI CTRYAG 4 cut(s) 309, 738, 780, 1482
SfuI TTCGAA 2 cut(s) 1005, 1599
SinI GGWCC 4 cut(s) 22, 1099, 1359, 1431
SmiMI CAYNNNNRTG 2 cut(s) 1184, 1325
SmlI CTYRAG 2 cut(s) 539, 980
SmoI CTYRAG 2 cut(s) 539, 980
SnaBI TACGTA 1 cut(s) 1624
Sse9I AATT 8 cut(s) 44, 476, 658, 793, 989, 1047, 1198, 1354
SsiI CCGC 2 cut(s) 398, 1286
SspI AATATT 1 cut(s) 727
SspMI CTAG 2 cut(s) 969, 1607
StyD4I CCNGG 5 cut(s) 359, 693, 1021, 1078, 1092
StyI CCWWGG 2 cut(s) 205, 1417
TaaI ACNGT 6 cut(s) 447, 601, 784, 1116, 1123, 1343
TaiI ACGT 3 cut(s) 171, 327, 1626
TaqI TCGA 3 cut(s) 1005, 1599, 1615
TaqII GACCGA 1 cut(s) 95
TasI AATT 8 cut(s) 44, 476, 658, 793, 989, 1047, 1198, 1354
TatI WGTACW 2 cut(s) 502, 976
TfiI GAWTC 4 cut(s) 28, 621, 682, 1072
Tru1I TTAA 4 cut(s) 722, 914, 1107, 1143
Tru9I TTAA 4 cut(s) 722, 914, 1107, 1143
TscAI CASTG 3 cut(s) 450, 904, 1445
TseFI GTSAC 5 cut(s) 107, 200, 422, 1290, 1423
TseI GCWGC 6 cut(s) 95, 229, 400, 512, 1169, 1316
Tsp45I GTSAC 5 cut(s) 107, 200, 422, 1290, 1423
TspDTI ATGAA 9 cut(s) 54, 290, 297, 533, 596, 1085, 1168, 1262, 1463
TspGWI ACGGA 1 cut(s) 174
TspRI CASTG 3 cut(s) 450, 904, 1445
Van91I CCANNNNNTGG 1 cut(s) 1440
VpaK11BI GGWCC 4 cut(s) 22, 1099, 1359, 1431
XagI CCTNNNNNAGG 1 cut(s) 692
XapI RAATTY 3 cut(s) 44, 476, 989
XceI RCATGY 1 cut(s) 871
XmiI GTMKAC 2 cut(s) 394, 1089
XmnI GAANNNNTTC 1 cut(s) 45
XspI CTAG 2 cut(s) 969, 1607
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.