MYB-CC type transfactor, LHEQLE motif
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G13040 AT3G13040 AT3G13040 |
| fragaria_vesca | FvH4_6g36430 FvH4_6g36430 FvH4_6g36430 |
| malus_domestica | MD09G1169000.v1.1 MD17G1157800.v1.1 |
| prunus_persica | Prupe.3G027400_v2.0.a1 Prupe.3G027400_v2.0.a1 Prupe.3G027400_v2.0.a1 Prupe.3G027400_v2.0.a1 Prupe.3G027400_v2.0.a1 Prupe.3G027400_v2.0.a1 Prupe.3G027400_v2.0.a1 Prupe.3G027400_v2.0.a1 Prupe.3G027400_v2.0.a1 Prupe.3G027400_v2.0.a1 Prupe.3G027400_v2.0.a1 |
| pyrus_communis | pycom09g08660 pycom17g15110 |
| rosa_chinensis | RchiOBHm_Chr2g0148421 |
| rosa_laevigata | RLG00000020349 |
| rosa_multiflora | Rmu_co8500471.1_g000001 Rmu_sc0007332.1_g000003 |
| rosa_roxburghii | Rroxscaffold_2G00098750 |
| rosa_rugosa | Rorug02G0406900 Rorug02G0407000 |
| rosa_samantha | Rh2AG465600 Rh2BG478800 Rh2CG452100 Rh2DG487600 |
| rosa_wichuraiana | Rw2G037950 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1255 |
| AccI | GTMKAC | 1 cut(s) | 675 |
| AccII | CGCG | 1 cut(s) | 570 |
| AciI | CCGC | 4 cut(s) | 44, 568, 770, 1238 |
| AclWI | GGATC | 3 cut(s) | 308, 712, 1331 |
| AcoI | YGGCCR | 1 cut(s) | 188 |
| AcuI | CTGAAG | 2 cut(s) | 1023, 1055 |
| AcyI | GRCGYC | 1 cut(s) | 614 |
| AdeI | CACNNNGTG | 1 cut(s) | 1178 |
| AfaI | GTAC | 1 cut(s) | 5 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 219, 700, 701 |
| AflIII | ACRYGT | 1 cut(s) | 1206 |
| AgsI | TTSAA | 3 cut(s) | 264, 785, 1085 |
| AjnI | CCWGG | 3 cut(s) | 175, 581, 658 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 184, 216, 639, 671 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 515, 547 |
| Alw21I | GWGCWC | 2 cut(s) | 212, 750 |
| Alw26I | GTCTC | 1 cut(s) | 266 |
| AlwI | GGATC | 3 cut(s) | 308, 712, 1331 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 341, 535 |
| AoxI | GGCC | 4 cut(s) | 188, 788, 798, 987 |
| ApeKI | GCWGC | 1 cut(s) | 710 |
| AspLEI | GCGC | 1 cut(s) | 572 |
| AspS9I | GGNCC | 2 cut(s) | 788, 987 |
| AsuC2I | CCSGG | 2 cut(s) | 415, 702 |
| AsuHPI | GGTGA | 4 cut(s) | 165, 683, 784, 1164 |
| AsuII | TTCGAA | 1 cut(s) | 491 |
| BalI | TGGCCA | 1 cut(s) | 190 |
| BanII | GRGCYC | 1 cut(s) | 750 |
| BauI | CACGAG | 1 cut(s) | 752 |
| BbsI | GAAGAC | 3 cut(s) | 216, 290, 1281 |
| Bbv12I | GWGCWC | 2 cut(s) | 212, 750 |
| BbvCI | CCTCAGC | 1 cut(s) | 1233 |
| BbvI | GCAGC | 1 cut(s) | 722 |
| BccI | CCATC | 5 cut(s) | 373, 395, 458, 729, 1015 |
| BciT130I | CCWGG | 3 cut(s) | 177, 583, 660 |
| BclI | TGATCA | 1 cut(s) | 774 |
| BcnI | CCSGG | 2 cut(s) | 415, 702 |
| BcoDI | GTCTC | 1 cut(s) | 266 |
| BfaI | CTAG | 3 cut(s) | 287, 884, 1176 |
| BfmI | CTRYAG | 2 cut(s) | 672, 1248 |
| BfuAI | ACCTGC | 1 cut(s) | 1255 |
| BglII | AGATCT | 2 cut(s) | 359, 594 |
| BisI | GCNGC | 3 cut(s) | 45, 711, 1238 |
| BlsI | GCNGC | 3 cut(s) | 46, 712, 1239 |
| Bme1390I | CCNGG | 5 cut(s) | 177, 415, 583, 660, 702 |
| BmgT120I | GGNCC | 2 cut(s) | 788, 987 |
| BmiI | GGNNCC | 1 cut(s) | 988 |
| BmrFI | CCNGG | 5 cut(s) | 177, 415, 583, 660, 702 |
| BmsI | GCATC | 2 cut(s) | 442, 1232 |
| BpiI | GAAGAC | 3 cut(s) | 216, 290, 1281 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 724, 756 |
| BpmI | CTGGAG | 5 cut(s) | 84, 150, 468, 681, 1073 |
| Bpu10I | CCTNAGC | 2 cut(s) | 744, 1233 |
| Bpu14I | TTCGAA | 1 cut(s) | 491 |
| BpuEI | CTTGAG | 2 cut(s) | 569, 1334 |
| BpuMI | CCSGG | 2 cut(s) | 415, 702 |
| BsaBI | GATNNNNATC | 1 cut(s) | 364 |
| BsaHI | GRCGYC | 1 cut(s) | 614 |
| BsaJI | CCNNGG | 1 cut(s) | 581 |
| BsaWI | WCCGGW | 1 cut(s) | 135 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 219, 700, 701 |
| Bse1I | ACTGG | 3 cut(s) | 101, 623, 951 |
| Bse3DI | GCAATG | 1 cut(s) | 672 |
| Bse8I | GATNNNNATC | 1 cut(s) | 364 |
| BseBI | CCWGG | 3 cut(s) | 177, 583, 660 |
| BseDI | CCNNGG | 1 cut(s) | 581 |
| BseJI | GATNNNNATC | 1 cut(s) | 364 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 219, 700, 701 |
| BseMI | GCAATG | 1 cut(s) | 672 |
| BseNI | ACTGG | 3 cut(s) | 101, 623, 951 |
| BseRI | GAGGAG | 1 cut(s) | 310 |
| BseXI | GCAGC | 1 cut(s) | 722 |
| Bsh1236I | CGCG | 1 cut(s) | 570 |
| BshFI | GGCC | 4 cut(s) | 190, 790, 800, 989 |
| BsiHKAI | GWGCWC | 2 cut(s) | 212, 750 |
| BsiSI | CCGG | 3 cut(s) | 136, 414, 701 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 219, 700, 701 |
| BsmAI | GTCTC | 1 cut(s) | 266 |
| BsmI | GAATGC | 1 cut(s) | 62 |
| BsnI | GGCC | 4 cut(s) | 190, 790, 800, 989 |
| Bsp119I | TTCGAA | 1 cut(s) | 491 |
| Bsp1286I | GDGCHC | 2 cut(s) | 212, 750 |
| Bsp1407I | TGTACA | 1 cut(s) | 3 |
| Bsp143I | GATC | 8 cut(s) | 313, 359, 514, 594, 704, 774, 846, 1336 |
| BspACI | CCGC | 4 cut(s) | 44, 568, 770, 1238 |
| BspANI | GGCC | 4 cut(s) | 190, 790, 800, 989 |
| BspFNI | CGCG | 1 cut(s) | 570 |
| BspHI | TCATGA | 3 cut(s) | 18, 475, 825 |
| BspLI | GGNNCC | 1 cut(s) | 988 |
| BspMAI | CTGCAG | 1 cut(s) | 1252 |
| BspMI | ACCTGC | 1 cut(s) | 1255 |
| BspPI | GGATC | 3 cut(s) | 308, 712, 1331 |
| BspQI | GCTCTTC | 2 cut(s) | 91, 1080 |
| BspT104I | TTCGAA | 1 cut(s) | 491 |
| BsrDI | GCAATG | 1 cut(s) | 672 |
| BsrGI | TGTACA | 1 cut(s) | 3 |
| BsrI | ACTGG | 3 cut(s) | 101, 623, 951 |
| BssECI | CCNNGG | 1 cut(s) | 581 |
| BssMI | GATC | 8 cut(s) | 313, 359, 514, 594, 704, 774, 846, 1336 |
| BssNI | GRCGYC | 1 cut(s) | 614 |
| BssSI | CACGAG | 1 cut(s) | 752 |
| Bst2BI | CACGAG | 1 cut(s) | 752 |
| Bst2UI | CCWGG | 3 cut(s) | 177, 583, 660 |
| Bst4CI | ACNGT | 3 cut(s) | 296, 531, 1165 |
| Bst6I | CTCTTC | 3 cut(s) | 91, 906, 1080 |
| BstACI | GRCGYC | 1 cut(s) | 614 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1066 |
| BstAUI | TGTACA | 1 cut(s) | 3 |
| BstBI | TTCGAA | 1 cut(s) | 491 |
| BstC8I | GCNNGC | 4 cut(s) | 82, 555, 1092, 1310 |
| BstFNI | CGCG | 1 cut(s) | 570 |
| BstHHI | GCGC | 1 cut(s) | 572 |
| BstKTI | GATC | 8 cut(s) | 316, 362, 517, 597, 707, 777, 849, 1339 |
| BstMAI | GTCTC | 1 cut(s) | 266 |
| BstMBI | GATC | 8 cut(s) | 313, 359, 514, 594, 704, 774, 846, 1336 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 1048, 1057, 1066, 1237 |
| BstNI | CCWGG | 3 cut(s) | 177, 583, 660 |
| BstNSI | RCATGY | 2 cut(s) | 1094, 1210 |
| BstSCI | CCNGG | 5 cut(s) | 175, 413, 581, 658, 700 |
| BstSFI | CTRYAG | 2 cut(s) | 672, 1248 |
| BstUI | CGCG | 1 cut(s) | 570 |
| BstV1I | GCAGC | 1 cut(s) | 722 |
| BstV2I | GAAGAC | 3 cut(s) | 216, 290, 1281 |
| BstX2I | RGATCY | 3 cut(s) | 359, 594, 1336 |
| BstYI | RGATCY | 3 cut(s) | 359, 594, 1336 |
| BsuRI | GGCC | 4 cut(s) | 190, 790, 800, 989 |
| BtsI | GCAGTG | 1 cut(s) | 1007 |
| BtsIMutI | CAGTG | 4 cut(s) | 375, 630, 1007, 1170 |
| BveI | ACCTGC | 1 cut(s) | 1255 |
| Cac8I | GCNNGC | 4 cut(s) | 82, 555, 1092, 1310 |
| CaiI | CAGNNNCTG | 2 cut(s) | 341, 535 |
| CciI | TCATGA | 3 cut(s) | 18, 475, 825 |
| CfoI | GCGC | 1 cut(s) | 572 |
| Cfr13I | GGNCC | 2 cut(s) | 788, 987 |
| CseI | GACGC | 2 cut(s) | 603, 1251 |
| CsiI | ACCWGGT | 1 cut(s) | 175 |
| Csp6I | GTAC | 1 cut(s) | 4 |
| CviAII | CATG | 7 cut(s) | 19, 476, 826, 854, 1043, 1091, 1207 |
| CviQI | GTAC | 1 cut(s) | 4 |
| DpnI | GATC | 8 cut(s) | 315, 361, 516, 596, 706, 776, 848, 1338 |
| DpnII | GATC | 8 cut(s) | 313, 359, 514, 594, 704, 774, 846, 1336 |
| DraIII | CACNNNGTG | 1 cut(s) | 1178 |
| EaeI | YGGCCR | 1 cut(s) | 188 |
| Eam1104I | CTCTTC | 3 cut(s) | 91, 906, 1080 |
| EarI | CTCTTC | 3 cut(s) | 91, 906, 1080 |
| Ecl136II | GAGCTC | 1 cut(s) | 748 |
| Eco24I | GRGCYC | 1 cut(s) | 750 |
| Eco53kI | GAGCTC | 1 cut(s) | 748 |
| Eco57I | CTGAAG | 2 cut(s) | 1023, 1055 |
| EcoICRI | GAGCTC | 1 cut(s) | 748 |
| EcoO109I | RGGNCCY | 1 cut(s) | 788 |
| EcoRII | CCWGG | 3 cut(s) | 175, 581, 658 |
| EcoT38I | GRGCYC | 1 cut(s) | 750 |
| FaeI | CATG | 7 cut(s) | 22, 479, 829, 857, 1046, 1094, 1210 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 420, 452 |
| FatI | CATG | 7 cut(s) | 18, 475, 825, 853, 1042, 1090, 1206 |
| FbaI | TGATCA | 1 cut(s) | 774 |
| FblI | GTMKAC | 1 cut(s) | 675 |
| Fnu4HI | GCNGC | 3 cut(s) | 45, 711, 1238 |
| FriOI | GRGCYC | 1 cut(s) | 750 |
| Fsp4HI | GCNGC | 3 cut(s) | 45, 711, 1238 |
| FspBI | CTAG | 3 cut(s) | 287, 884, 1176 |
| GlaI | GCGC | 1 cut(s) | 571 |
| GluI | GCNGC | 3 cut(s) | 45, 711, 1238 |
| GsuI | CTGGAG | 5 cut(s) | 84, 150, 468, 681, 1073 |
| HaeIII | GGCC | 4 cut(s) | 190, 790, 800, 989 |
| HapII | CCGG | 3 cut(s) | 136, 414, 701 |
| HgaI | GACGC | 2 cut(s) | 603, 1251 |
| HhaI | GCGC | 1 cut(s) | 572 |
| Hin1I | GRCGYC | 1 cut(s) | 614 |
| Hin1II | CATG | 7 cut(s) | 22, 479, 829, 857, 1046, 1094, 1210 |
| Hin6I | GCGC | 1 cut(s) | 570 |
| HinP1I | GCGC | 1 cut(s) | 570 |
| HindIII | AAGCTT | 1 cut(s) | 78 |
| HinfI | GANTC | 9 cut(s) | 170, 274, 350, 637, 739, 755, 1184, 1196, 1328 |
| HpaII | CCGG | 3 cut(s) | 136, 414, 701 |
| HphI | GGTGA | 4 cut(s) | 165, 683, 784, 1164 |
| Hpy166II | GTNNAC | 1 cut(s) | 676 |
| Hpy188III | TCNNGA | 7 cut(s) | 19, 167, 447, 476, 726, 743, 826 |
| Hpy8I | GTNNAC | 1 cut(s) | 676 |
| Hpy99I | CGWCG | 2 cut(s) | 1267, 1308 |
| HpyAV | CCTTC | 4 cut(s) | 223, 705, 779, 1131 |
| HpyCH4III | ACNGT | 3 cut(s) | 296, 531, 1165 |
| HpyCH4IV | ACGT | 2 cut(s) | 678, 1303 |
| HpyCH4V | TGCA | 8 cut(s) | 60, 237, 356, 871, 1018, 1042, 1060, 1250 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 1048, 1057, 1066, 1237 |
| HpySE526I | ACGT | 2 cut(s) | 678, 1303 |
| Hsp92I | GRCGYC | 1 cut(s) | 614 |
| Hsp92II | CATG | 7 cut(s) | 22, 479, 829, 857, 1046, 1094, 1210 |
| HspAI | GCGC | 1 cut(s) | 570 |
| Ksp22I | TGATCA | 1 cut(s) | 774 |
| Kzo9I | GATC | 8 cut(s) | 313, 359, 514, 594, 704, 774, 846, 1336 |
| LguI | GCTCTTC | 2 cut(s) | 91, 1080 |
| LmnI | GCTCC | 2 cut(s) | 662, 753 |
| Lsp1109I | GCAGC | 1 cut(s) | 722 |
| LweI | GCATC | 2 cut(s) | 442, 1232 |
| MabI | ACCWGGT | 1 cut(s) | 175 |
| MaeI | CTAG | 3 cut(s) | 287, 884, 1176 |
| MaeII | ACGT | 2 cut(s) | 678, 1303 |
| MaeIII | GTNAC | 2 cut(s) | 156, 625 |
| MalI | GATC | 8 cut(s) | 315, 361, 516, 596, 706, 776, 848, 1338 |
| MboI | GATC | 8 cut(s) | 313, 359, 514, 594, 704, 774, 846, 1336 |
| MfeI | CAATTG | 1 cut(s) | 1037 |
| MflI | RGATCY | 3 cut(s) | 359, 594, 1336 |
| MhlI | GDGCHC | 2 cut(s) | 212, 750 |
| MlsI | TGGCCA | 1 cut(s) | 190 |
| MluCI | AATT | 4 cut(s) | 524, 995, 1037, 1080 |
| MluNI | TGGCCA | 1 cut(s) | 190 |
| MlyI | GAGTC | 6 cut(s) | 268, 359, 646, 733, 764, 1178 |
| MmeI | TCCRAC | 2 cut(s) | 1095, 1245 |
| Mox20I | TGGCCA | 1 cut(s) | 190 |
| MscI | TGGCCA | 1 cut(s) | 190 |
| MseI | TTAA | 3 cut(s) | 438, 816, 998 |
| Msp20I | TGGCCA | 1 cut(s) | 190 |
| MspA1I | CMGCKG | 2 cut(s) | 44, 1051 |
| MspI | CCGG | 3 cut(s) | 136, 414, 701 |
| MspR9I | CCNGG | 5 cut(s) | 177, 415, 583, 660, 702 |
| MunI | CAATTG | 1 cut(s) | 1037 |
| Mva1269I | GAATGC | 1 cut(s) | 62 |
| MvaI | CCWGG | 3 cut(s) | 177, 583, 660 |
| MvnI | CGCG | 1 cut(s) | 570 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 1048, 1057, 1066, 1237 |
| NciI | CCSGG | 2 cut(s) | 415, 702 |
| NdeII | GATC | 8 cut(s) | 313, 359, 514, 594, 704, 774, 846, 1336 |
| NlaIII | CATG | 7 cut(s) | 22, 479, 829, 857, 1046, 1094, 1210 |
| NlaIV | GGNNCC | 1 cut(s) | 988 |
| NmuCI | GTSAC | 2 cut(s) | 156, 625 |
| NspI | RCATGY | 2 cut(s) | 1094, 1210 |
| NspV | TTCGAA | 1 cut(s) | 491 |
| PaeI | GCATGC | 1 cut(s) | 1094 |
| PagI | TCATGA | 3 cut(s) | 18, 475, 825 |
| PciI | ACATGT | 1 cut(s) | 1206 |
| PciSI | GCTCTTC | 2 cut(s) | 91, 1080 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 611 |
| PctI | GAATGC | 1 cut(s) | 62 |
| PfeI | GAWTC | 3 cut(s) | 170, 1196, 1328 |
| PfoI | TCCNGGA | 2 cut(s) | 658, 700 |
| PkrI | GCNGC | 3 cut(s) | 46, 712, 1239 |
| PleI | GAGTC | 6 cut(s) | 268, 358, 645, 733, 763, 1178 |
| PpsI | GAGTC | 6 cut(s) | 268, 358, 645, 733, 763, 1178 |
| PscI | ACATGT | 1 cut(s) | 1206 |
| Psp124BI | GAGCTC | 1 cut(s) | 750 |
| Psp6I | CCWGG | 3 cut(s) | 175, 581, 658 |
| PspGI | CCWGG | 3 cut(s) | 175, 581, 658 |
| PspN4I | GGNNCC | 1 cut(s) | 988 |
| PspPI | GGNCC | 2 cut(s) | 788, 987 |
| PstI | CTGCAG | 1 cut(s) | 1252 |
| PstNI | CAGNNNCTG | 2 cut(s) | 341, 535 |
| PsuI | RGATCY | 3 cut(s) | 359, 594, 1336 |
| PvuII | CAGCTG | 1 cut(s) | 1051 |
| RsaI | GTAC | 1 cut(s) | 5 |
| RsaNI | GTAC | 1 cut(s) | 4 |
| SacI | GAGCTC | 1 cut(s) | 750 |
| SapI | GCTCTTC | 2 cut(s) | 91, 1080 |
| SaqAI | TTAA | 3 cut(s) | 438, 816, 998 |
| SatI | GCNGC | 3 cut(s) | 45, 711, 1238 |
| Sau3AI | GATC | 8 cut(s) | 313, 359, 514, 594, 704, 774, 846, 1336 |
| Sau96I | GGNCC | 2 cut(s) | 788, 987 |
| SchI | GAGTC | 6 cut(s) | 268, 359, 646, 733, 764, 1178 |
| ScrFI | CCNGG | 5 cut(s) | 177, 415, 583, 660, 702 |
| SduI | GDGCHC | 2 cut(s) | 212, 750 |
| SexAI | ACCWGGT | 1 cut(s) | 175 |
| SfaNI | GCATC | 2 cut(s) | 442, 1232 |
| SfcI | CTRYAG | 2 cut(s) | 672, 1248 |
| SfuI | TTCGAA | 1 cut(s) | 491 |
| SmlI | CTYRAG | 2 cut(s) | 548, 1313 |
| SmoI | CTYRAG | 2 cut(s) | 548, 1313 |
| SphI | GCATGC | 1 cut(s) | 1094 |
| Sse9I | AATT | 4 cut(s) | 524, 995, 1037, 1080 |
| SsiI | CCGC | 4 cut(s) | 44, 568, 770, 1238 |
| SspMI | CTAG | 3 cut(s) | 287, 884, 1176 |
| SstI | GAGCTC | 1 cut(s) | 750 |
| StyD4I | CCNGG | 5 cut(s) | 175, 413, 581, 658, 700 |
| TaaI | ACNGT | 3 cut(s) | 296, 531, 1165 |
| TaiI | ACGT | 2 cut(s) | 681, 1306 |
| TaqI | TCGA | 2 cut(s) | 491, 725 |
| TaqII | GACCGA | 1 cut(s) | 210 |
| TasI | AATT | 4 cut(s) | 524, 995, 1037, 1080 |
| TatI | WGTACW | 1 cut(s) | 3 |
| TauI | GCSGC | 2 cut(s) | 47, 1240 |
| TfiI | GAWTC | 3 cut(s) | 170, 1196, 1328 |
| Tru1I | TTAA | 3 cut(s) | 438, 816, 998 |
| Tru9I | TTAA | 3 cut(s) | 438, 816, 998 |
| TscAI | CASTG | 4 cut(s) | 382, 630, 1014, 1170 |
| TseFI | GTSAC | 2 cut(s) | 156, 625 |
| TseI | GCWGC | 1 cut(s) | 710 |
| Tsp45I | GTSAC | 2 cut(s) | 156, 625 |
| TspDTI | ATGAA | 9 cut(s) | 35, 69, 139, 464, 558, 615, 675, 842, 1059 |
| TspRI | CASTG | 4 cut(s) | 382, 630, 1014, 1170 |
| XceI | RCATGY | 2 cut(s) | 1094, 1210 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 338 |
| XmiI | GTMKAC | 1 cut(s) | 675 |
| XspI | CTAG | 3 cut(s) | 287, 884, 1176 |