Prupe.3G027400_v2.0.a1
MYB Family

MYB-CC type transfactor, LHEQLE motif

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Forward (+)
2032049 .. 2037105
5057 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G027400.9

Sequence Viewer

Length: 1425 bp
ATGAAGGTTGGGCTTCCATCTACAATAATGAGTCGCCATGATATAATCTCTGTACCTCAAAGTGAGACTACCAAAGAAGTGACACAATCATATTGTACTCCCAAATCCCAGATGCATGATTTTTTGGGTAGTAAATCAGAAGGCAGGAGTTTAGCGGCCAGTGAATGCTCATCTGCACGCCTGTCACCTTTCATACGGGCAGAATCTCTTGGTTCTCCTACAAATATTCGAGGATCTAGTGTTCAACATTCCCAGAACACATTTTCGCGGTCTTCTGTTTTCTGTACCAGTTTGTATCAGTCATCTTCATCGAGTTCTGAAACCTCTCGGCAGCTTGGAAATTTGCCATTTCTTCCACATCCTCCAACATACAGCCAGTCCATTTCTGCTGTTGATTCCAAATCGCCATTTCTCTTAAGTGACAATATGAGCAATCAATATGATGACGAACAATCAGAGGATCTCATGAAAGACTTTCTTAATTTGCATGGAGATGGCTCTCATGGTAGCTTTCATGGTATTAGTTGTGGAAGTGACACTCTAGCACTTACAGAGCAATTAGAGTTACAGTTTTTGTCAGATCAACTTGACATGGCTATCACGGACAATGGAGAAAATCCCGGGCTTGACGAAATATATGAAATTCCTCAAGCCTCACCAAAACCGGCCATAGGATTGACATATAGTAAGAGTTGTCGCTTGACAACACTACCTGTTGATGCTCTTTCAAGTCACCCCTCTCCTGGACCTTCGCCTGCACATAGACCACGAATGCGATGGACACCTGAGCTCCATGAGCGTTTTGTAGAGGCTGTTAACAAGCTTGATGGTGCTGAAAAGGCTACTCCAAAAGGTGTATTAAAGGTCATGAATGTTGAGGGCTTAACCATTTATCATGTGAAAAGCCACTTACAGAAATACCGACTTGCCAAGTATATGCCAGAGAAAAGAGAAGATAAGGCGGCCTCTAGTTCTGAAGAAAAGAAAGCAGCTTCAAGCAGCAGCGAAAGTGACGGAAGAAGAAAAGGGAGCATTCAAATCACCGAGGCTCTGCGCATGCAAATGGAAGTTCAGAAGCAACTGCATGAGCAGCTTGAGGTTCAAAGGGCCCTTCAGCTACGCATAGAAGATCATGCAAAGTACTTGCAGAAGATCTTGGAGGAGCAACAGAAAGCTGGCAGCGCCTTACTTTCTCCACAAGCCTTGTCATCGCTGACGACTAATTCCATCCAAGAGCCTGAACAACAACCTTCATCATCAGCTGGTGTATCGCCGACGCAACCTGCTGAGTCTGACTCATCATCACCTCAATCATTGAAGCATAAAGCTACTGATAGCAGTGAATCTGAGCCACCAGCATGCACCAAAAAGCAACGTCTTGAAGAGAAACCAGATGAGGGTGTTGTTGAAAATCCTCAGCAATAA

Protein Analysis

475

Amino Acids

51.97

Weight (kDa)

5.73

Isoelectric Point (pI)

78.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1055
Acc36I ACCTGC 1 cut(s) 1291
AccII CGCG 1 cut(s) 268
AciI CCGC 3 cut(s) 155, 268, 962
AclWI GGATC 2 cut(s) 241, 468
AcoI YGGCCR 2 cut(s) 156, 666
AcsI RAATTY 2 cut(s) 340, 642
AcuI CTGAAG 2 cut(s) 996, 1097
AfaI GTAC 4 cut(s) 54, 97, 286, 1142
AfiI CCNNNNNNNGG 3 cut(s) 671, 743, 1397
AflII CTTAAG 1 cut(s) 415
AgsI TTSAA 8 cut(s) 245, 729, 996, 1037, 1103, 1318, 1382, 1409
AjnI CCWGG 1 cut(s) 742
AloI GAACNNNNNNTCC 2 cut(s) 225, 257
Alw21I GWGCWC 1 cut(s) 792
Alw26I GTCTC 1 cut(s) 59
AlwI GGATC 2 cut(s) 241, 468
Ama87I CYCGRG 1 cut(s) 620
AoxI GGCC 4 cut(s) 156, 666, 963, 1107
ApaI GGGCCC 1 cut(s) 1111
ApeKI GCWGC 6 cut(s) 331, 989, 999, 1002, 1090, 1179
ApoI RAATTY 2 cut(s) 340, 642
AspLEI GCGC 2 cut(s) 1056, 1184
AspS9I GGNCC 3 cut(s) 746, 1107, 1108
AsuC2I CCSGG 2 cut(s) 621, 622
AsuHPI GGTGA 5 cut(s) 177, 648, 725, 1033, 1296
AvaI CYCGRG 1 cut(s) 620
AvaII GGWCC 1 cut(s) 746
BaeGI GKGCMC 1 cut(s) 1111
BanII GRGCYC 2 cut(s) 792, 1111
BbsI GAAGAC 1 cut(s) 264
Bbv12I GWGCWC 1 cut(s) 792
BbvCI CCTCAGC 1 cut(s) 1416
BbvI GCAGC 6 cut(s) 343, 1001, 1011, 1014, 1102, 1191
BccI CCATC 5 cut(s) 25, 488, 771, 821, 1235
BciT130I CCWGG 1 cut(s) 744
BcnI CCSGG 2 cut(s) 621, 622
BcoDI GTCTC 1 cut(s) 59
BfaI CTAG 3 cut(s) 237, 542, 969
BfoI RGCGCY 1 cut(s) 1185
BfrI CTTAAG 1 cut(s) 415
BfuAI ACCTGC 1 cut(s) 1291
BglII AGATCT 1 cut(s) 1152
BisI GCNGC 8 cut(s) 156, 332, 963, 990, 1000, 1003, 1091, 1180
BlsI GCNGC 8 cut(s) 157, 333, 964, 991, 1001, 1004, 1092, 1181
BmcAI AGTACT 1 cut(s) 1142
Bme1390I CCNGG 3 cut(s) 621, 622, 744
Bme18I GGWCC 1 cut(s) 746
BmeT110I CYCGRG 1 cut(s) 620
BmgT120I GGNCC 3 cut(s) 746, 1107, 1108
BmiI GGNNCC 1 cut(s) 1109
BmrFI CCNGG 3 cut(s) 621, 622, 744
BmsI GCATC 2 cut(s) 102, 709
BpiI GAAGAC 1 cut(s) 264
BplI GAGNNNNNCTC 2 cut(s) 1280, 1312
Bpu10I CCTNAGC 2 cut(s) 786, 1416
BpuEI CTTGAG 2 cut(s) 633, 1115
BpuMI CCSGG 2 cut(s) 621, 622
BsaJI CCNNGG 2 cut(s) 620, 1044
BsaXI ACNNNNNCTCC 2 cut(s) 774, 804
Bsc4I CCNNNNNNNGG 3 cut(s) 671, 743, 1397
Bse118I RCCGGY 1 cut(s) 664
Bse1I ACTGG 3 cut(s) 159, 288, 376
BseBI CCWGG 1 cut(s) 744
BseDI CCNNGG 2 cut(s) 620, 1044
BseGI GGATG 2 cut(s) 358, 1227
BseLI CCNNNNNNNGG 3 cut(s) 671, 743, 1397
BseMII CTCAG 3 cut(s) 777, 1278, 1338
BseNI ACTGG 3 cut(s) 159, 288, 376
BseRI GAGGAG 1 cut(s) 1175
BseSI GKGCMC 1 cut(s) 1111
BseXI GCAGC 6 cut(s) 343, 1001, 1011, 1014, 1102, 1191
BsgI GTGCAG 2 cut(s) 159, 741
Bsh1236I CGCG 1 cut(s) 268
BshFI GGCC 4 cut(s) 158, 668, 965, 1109
BsiHKAI GWGCWC 1 cut(s) 792
BsiHKCI CYCGRG 1 cut(s) 620
BsiSI CCGG 2 cut(s) 621, 665
BslI CCNNNNNNNGG 3 cut(s) 671, 743, 1397
BsmAI GTCTC 1 cut(s) 59
BsmI GAATGC 3 cut(s) 170, 777, 1032
BsnI GGCC 4 cut(s) 158, 668, 965, 1109
BsoBI CYCGRG 1 cut(s) 620
Bsp120I GGGCCC 1 cut(s) 1107
Bsp1286I GDGCHC 2 cut(s) 792, 1111
Bsp143I GATC 5 cut(s) 233, 460, 580, 1129, 1152
BspACI CCGC 3 cut(s) 155, 268, 962
BspANI GGCC 4 cut(s) 158, 668, 965, 1109
BspCNI CTCAG 3 cut(s) 778, 1279, 1339
BspFNI CGCG 1 cut(s) 268
BspHI TCATGA 2 cut(s) 465, 867
BspLI GGNNCC 1 cut(s) 1109
BspMI ACCTGC 1 cut(s) 1291
BspPI GGATC 2 cut(s) 241, 468
BspTI CTTAAG 1 cut(s) 415
BsrFI RCCGGY 1 cut(s) 664
BsrI ACTGG 3 cut(s) 159, 288, 376
BssAI RCCGGY 1 cut(s) 664
BssECI CCNNGG 2 cut(s) 620, 1044
BssMI GATC 5 cut(s) 233, 460, 580, 1129, 1152
Bst2UI CCWGG 1 cut(s) 744
Bst4CI ACNGT 1 cut(s) 570
Bst6I CTCTTC 1 cut(s) 1377
BstAFI CTTAAG 1 cut(s) 415
BstC8I GCNNGC 5 cut(s) 178, 756, 1058, 1177, 1360
BstDEI CTNAG 4 cut(s) 786, 1287, 1347, 1416
BstF5I GGATG 2 cut(s) 358, 1227
BstFNI CGCG 1 cut(s) 268
BstH2I RGCGCY 1 cut(s) 1185
BstHHI GCGC 2 cut(s) 1056, 1184
BstKTI GATC 5 cut(s) 236, 463, 583, 1132, 1155
BstMAI GTCTC 1 cut(s) 59
BstMBI GATC 5 cut(s) 233, 460, 580, 1129, 1152
BstMWI GCNNNNNNNGC 4 cut(s) 796, 839, 1090, 1181
BstNI CCWGG 1 cut(s) 744
BstNSI RCATGY 2 cut(s) 1060, 1362
BstSCI CCNGG 3 cut(s) 619, 620, 742
BstSLI GKGCMC 1 cut(s) 1111
BstUI CGCG 1 cut(s) 268
BstV1I GCAGC 6 cut(s) 343, 1001, 1011, 1014, 1102, 1191
BstV2I GAAGAC 1 cut(s) 264
BstX2I RGATCY 3 cut(s) 233, 460, 1152
BstYI RGATCY 3 cut(s) 233, 460, 1152
BsuRI GGCC 4 cut(s) 158, 668, 965, 1109
BtgZI GCGATG 2 cut(s) 790, 1194
BtsCI GGATG 2 cut(s) 358, 1227
BtsI GCAGTG 1 cut(s) 1345
BtsIMutI CAGTG 2 cut(s) 166, 1345
BveI ACCTGC 1 cut(s) 1291
Cac8I GCNNGC 5 cut(s) 178, 756, 1058, 1177, 1360
CciI TCATGA 2 cut(s) 465, 867
CfoI GCGC 2 cut(s) 1056, 1184
Cfr10I RCCGGY 1 cut(s) 664
Cfr13I GGNCC 3 cut(s) 746, 1107, 1108
Cfr9I CCCGGG 1 cut(s) 620
CseI GACGC 1 cut(s) 1285
Csp6I GTAC 4 cut(s) 53, 96, 285, 1141
CspCI CAANNNNNGTGG 2 cut(s) 1185, 1220
CviQI GTAC 4 cut(s) 53, 96, 285, 1141
DdeI CTNAG 4 cut(s) 786, 1287, 1347, 1416
DpnI GATC 5 cut(s) 235, 462, 582, 1131, 1154
DpnII GATC 5 cut(s) 233, 460, 580, 1129, 1152
EaeI YGGCCR 2 cut(s) 156, 666
Eam1104I CTCTTC 1 cut(s) 1377
EarI CTCTTC 1 cut(s) 1377
Ecl136II GAGCTC 1 cut(s) 790
Eco24I GRGCYC 2 cut(s) 792, 1111
Eco47I GGWCC 1 cut(s) 746
Eco53kI GAGCTC 1 cut(s) 790
Eco57I CTGAAG 2 cut(s) 996, 1097
Eco88I CYCGRG 1 cut(s) 620
EcoICRI GAGCTC 1 cut(s) 790
EcoO109I RGGNCCY 2 cut(s) 1107, 1108
EcoRII CCWGG 1 cut(s) 742
EcoT22I ATGCAT 1 cut(s) 117
EcoT38I GRGCYC 2 cut(s) 792, 1111
FalI AAGNNNNNCTT 2 cut(s) 462, 494
Fnu4HI GCNGC 8 cut(s) 156, 332, 963, 990, 1000, 1003, 1091, 1180
FokI GGATG 2 cut(s) 345, 1214
FriOI GRGCYC 2 cut(s) 792, 1111
Fsp4HI GCNGC 8 cut(s) 156, 332, 963, 990, 1000, 1003, 1091, 1180
FspBI CTAG 3 cut(s) 237, 542, 969
FspI TGCGCA 1 cut(s) 1055
GlaI GCGC 2 cut(s) 1055, 1183
GluI GCNGC 8 cut(s) 156, 332, 963, 990, 1000, 1003, 1091, 1180
HaeII RGCGCY 1 cut(s) 1185
HaeIII GGCC 4 cut(s) 158, 668, 965, 1109
HapII CCGG 2 cut(s) 621, 665
HgaI GACGC 1 cut(s) 1285
HhaI GCGC 2 cut(s) 1056, 1184
Hin6I GCGC 2 cut(s) 1054, 1182
HinP1I GCGC 2 cut(s) 1054, 1182
HincII GTYRAC 1 cut(s) 817
HindII GTYRAC 1 cut(s) 817
HindIII AAGCTT 1 cut(s) 821
HinfI GANTC 6 cut(s) 31, 203, 395, 1289, 1295, 1343
HpaI GTTAAC 1 cut(s) 817
HpaII CCGG 2 cut(s) 621, 665
HphI GGTGA 5 cut(s) 177, 648, 725, 1033, 1296
Hpy166II GTNNAC 1 cut(s) 817
Hpy188I TCNGA 8 cut(s) 139, 319, 457, 580, 976, 1074, 1294, 1348
Hpy188III TCNNGA 3 cut(s) 466, 868, 1379
Hpy8I GTNNAC 1 cut(s) 817
Hpy99I CGWCG 1 cut(s) 1279
HpyAV CCTTC 4 cut(s) 134, 759, 1121, 1260
HpyCH4III ACNGT 1 cut(s) 570
HpyCH4IV ACGT 1 cut(s) 1375
HpyCH4V TGCA 9 cut(s) 115, 176, 487, 758, 1060, 1084, 1136, 1147, 1362
HpyF10VI GCNNNNNNNGC 4 cut(s) 796, 839, 1090, 1181
HpyF3I CTNAG 4 cut(s) 786, 1287, 1347, 1416
HpySE526I ACGT 1 cut(s) 1375
HspAI GCGC 2 cut(s) 1054, 1182
KspAI GTTAAC 1 cut(s) 817
Kzo9I GATC 5 cut(s) 233, 460, 580, 1129, 1152
LmnI GCTCC 3 cut(s) 795, 1029, 1162
Lsp1109I GCAGC 6 cut(s) 343, 1001, 1011, 1014, 1102, 1191
LweI GCATC 2 cut(s) 102, 709
MaeI CTAG 3 cut(s) 237, 542, 969
MaeII ACGT 1 cut(s) 1375
MaeIII GTNAC 7 cut(s) 79, 183, 419, 533, 564, 731, 1010
MalI GATC 5 cut(s) 235, 462, 582, 1131, 1154
MboI GATC 5 cut(s) 233, 460, 580, 1129, 1152
MflI RGATCY 3 cut(s) 233, 460, 1152
MhlI GDGCHC 2 cut(s) 792, 1111
MluCI AATT 5 cut(s) 340, 481, 557, 642, 1222
MlyI GAGTC 3 cut(s) 40, 1289, 1298
MmeI TCCRAC 1 cut(s) 389
Mph1103I ATGCAT 1 cut(s) 117
MseI TTAA 5 cut(s) 416, 480, 816, 860, 884
MslI CAYNNNNRTG 3 cut(s) 492, 1061, 1357
MspA1I CMGCKG 1 cut(s) 1262
MspCI CTTAAG 1 cut(s) 415
MspI CCGG 2 cut(s) 621, 665
MspR9I CCNGG 3 cut(s) 621, 622, 744
Mva1269I GAATGC 3 cut(s) 170, 777, 1032
MvaI CCWGG 1 cut(s) 744
MvnI CGCG 1 cut(s) 268
MwoI GCNNNNNNNGC 4 cut(s) 796, 839, 1090, 1181
NciI CCSGG 2 cut(s) 621, 622
NdeII GATC 5 cut(s) 233, 460, 580, 1129, 1152
NlaIV GGNNCC 1 cut(s) 1109
NmeAIII GCCGAG 1 cut(s) 307
NmuCI GTSAC 6 cut(s) 79, 183, 419, 533, 731, 1010
NsbI TGCGCA 1 cut(s) 1055
NsiI ATGCAT 1 cut(s) 117
NspI RCATGY 2 cut(s) 1060, 1362
PaeI GCATGC 2 cut(s) 1060, 1362
PagI TCATGA 2 cut(s) 465, 867
PctI GAATGC 3 cut(s) 170, 777, 1032
PfeI GAWTC 3 cut(s) 203, 395, 1343
PfoI TCCNGGA 1 cut(s) 742
PkrI GCNGC 8 cut(s) 157, 333, 964, 991, 1001, 1004, 1092, 1181
PleI GAGTC 3 cut(s) 39, 1289, 1297
PpsI GAGTC 3 cut(s) 39, 1289, 1297
Psp124BI GAGCTC 1 cut(s) 792
Psp6I CCWGG 1 cut(s) 742
PspGI CCWGG 1 cut(s) 742
PspN4I GGNNCC 1 cut(s) 1109
PspOMI GGGCCC 1 cut(s) 1107
PspPI GGNCC 3 cut(s) 746, 1107, 1108
PsuI RGATCY 3 cut(s) 233, 460, 1152
PvuII CAGCTG 1 cut(s) 1262
RsaI GTAC 4 cut(s) 54, 97, 286, 1142
RsaNI GTAC 4 cut(s) 53, 96, 285, 1141
RseI CAYNNNNRTG 3 cut(s) 492, 1061, 1357
SacI GAGCTC 1 cut(s) 792
SaqAI TTAA 5 cut(s) 416, 480, 816, 860, 884
SatI GCNGC 8 cut(s) 156, 332, 963, 990, 1000, 1003, 1091, 1180
Sau3AI GATC 5 cut(s) 233, 460, 580, 1129, 1152
Sau96I GGNCC 3 cut(s) 746, 1107, 1108
ScaI AGTACT 1 cut(s) 1142
SchI GAGTC 3 cut(s) 40, 1289, 1298
ScrFI CCNGG 3 cut(s) 621, 622, 744
SduI GDGCHC 2 cut(s) 792, 1111
SfaNI GCATC 2 cut(s) 102, 709
SinI GGWCC 1 cut(s) 746
SmaI CCCGGG 1 cut(s) 622
SmiMI CAYNNNNRTG 3 cut(s) 492, 1061, 1357
SmlI CTYRAG 3 cut(s) 415, 648, 1094
SmoI CTYRAG 3 cut(s) 415, 648, 1094
SphI GCATGC 2 cut(s) 1060, 1362
Sse9I AATT 5 cut(s) 340, 481, 557, 642, 1222
SsiI CCGC 3 cut(s) 155, 268, 962
SspI AATATT 1 cut(s) 226
SspMI CTAG 3 cut(s) 237, 542, 969
SstI GAGCTC 1 cut(s) 792
StyD4I CCNGG 3 cut(s) 619, 620, 742
TaaI ACNGT 1 cut(s) 570
TaiI ACGT 1 cut(s) 1378
TaqI TCGA 2 cut(s) 229, 311
TasI AATT 5 cut(s) 340, 481, 557, 642, 1222
TatI WGTACW 2 cut(s) 95, 1140
TauI GCSGC 2 cut(s) 158, 965
TfiI GAWTC 3 cut(s) 203, 395, 1343
Tru1I TTAA 5 cut(s) 416, 480, 816, 860, 884
Tru9I TTAA 5 cut(s) 416, 480, 816, 860, 884
TscAI CASTG 2 cut(s) 166, 1345
TseFI GTSAC 6 cut(s) 79, 183, 419, 533, 731, 1010
TseI GCWGC 6 cut(s) 331, 989, 999, 1002, 1090, 1179
Tsp45I GTSAC 6 cut(s) 79, 183, 419, 533, 731, 1010
TspDTI ATGAA 8 cut(s) 17, 181, 297, 482, 503, 654, 884, 1242
TspGWI ACGGA 2 cut(s) 617, 1029
TspMI CCCGGG 1 cut(s) 620
TspRI CASTG 2 cut(s) 166, 1345
Vha464I CTTAAG 1 cut(s) 415
VpaK11BI GGWCC 1 cut(s) 746
XapI RAATTY 2 cut(s) 340, 642
XceI RCATGY 2 cut(s) 1060, 1362
XcmI CCANNNNNNNNNTGG 1 cut(s) 774
XmaI CCCGGG 1 cut(s) 620
XspI CTAG 3 cut(s) 237, 542, 969
ZrmI AGTACT 1 cut(s) 1142
Zsp2I ATGCAT 1 cut(s) 117
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.