MYB-CC type transfactor, LHEQLE motif
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G13040 AT3G13040 AT3G13040 |
| fragaria_vesca | FvH4_6g36430 FvH4_6g36430 FvH4_6g36430 |
| malus_domestica | MD09G1169000.v1.1 MD17G1157800.v1.1 |
| prunus_persica | Prupe.3G027400_v2.0.a1 Prupe.3G027400_v2.0.a1 Prupe.3G027400_v2.0.a1 Prupe.3G027400_v2.0.a1 Prupe.3G027400_v2.0.a1 Prupe.3G027400_v2.0.a1 Prupe.3G027400_v2.0.a1 Prupe.3G027400_v2.0.a1 Prupe.3G027400_v2.0.a1 Prupe.3G027400_v2.0.a1 Prupe.3G027400_v2.0.a1 |
| pyrus_communis | pycom09g08660 pycom17g15110 |
| rosa_chinensis | RchiOBHm_Chr2g0148421 |
| rosa_laevigata | RLG00000020349 |
| rosa_multiflora | Rmu_co8500471.1_g000001 Rmu_sc0007332.1_g000003 |
| rosa_roxburghii | Rroxscaffold_2G00098750 |
| rosa_rugosa | Rorug02G0406900 Rorug02G0407000 |
| rosa_samantha | Rh2AG465600 Rh2BG478800 Rh2CG452100 Rh2DG487600 |
| rosa_wichuraiana | Rw2G037950 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 1055 |
| Acc36I | ACCTGC | 1 cut(s) | 1291 |
| AccII | CGCG | 1 cut(s) | 268 |
| AciI | CCGC | 3 cut(s) | 155, 268, 962 |
| AclWI | GGATC | 2 cut(s) | 241, 468 |
| AcoI | YGGCCR | 2 cut(s) | 156, 666 |
| AcsI | RAATTY | 2 cut(s) | 340, 642 |
| AcuI | CTGAAG | 2 cut(s) | 996, 1097 |
| AfaI | GTAC | 4 cut(s) | 54, 97, 286, 1142 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 671, 743, 1397 |
| AflII | CTTAAG | 1 cut(s) | 415 |
| AgsI | TTSAA | 8 cut(s) | 245, 729, 996, 1037, 1103, 1318, 1382, 1409 |
| AjnI | CCWGG | 1 cut(s) | 742 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 225, 257 |
| Alw21I | GWGCWC | 1 cut(s) | 792 |
| Alw26I | GTCTC | 1 cut(s) | 59 |
| AlwI | GGATC | 2 cut(s) | 241, 468 |
| Ama87I | CYCGRG | 1 cut(s) | 620 |
| AoxI | GGCC | 4 cut(s) | 156, 666, 963, 1107 |
| ApaI | GGGCCC | 1 cut(s) | 1111 |
| ApeKI | GCWGC | 6 cut(s) | 331, 989, 999, 1002, 1090, 1179 |
| ApoI | RAATTY | 2 cut(s) | 340, 642 |
| AspLEI | GCGC | 2 cut(s) | 1056, 1184 |
| AspS9I | GGNCC | 3 cut(s) | 746, 1107, 1108 |
| AsuC2I | CCSGG | 2 cut(s) | 621, 622 |
| AsuHPI | GGTGA | 5 cut(s) | 177, 648, 725, 1033, 1296 |
| AvaI | CYCGRG | 1 cut(s) | 620 |
| AvaII | GGWCC | 1 cut(s) | 746 |
| BaeGI | GKGCMC | 1 cut(s) | 1111 |
| BanII | GRGCYC | 2 cut(s) | 792, 1111 |
| BbsI | GAAGAC | 1 cut(s) | 264 |
| Bbv12I | GWGCWC | 1 cut(s) | 792 |
| BbvCI | CCTCAGC | 1 cut(s) | 1416 |
| BbvI | GCAGC | 6 cut(s) | 343, 1001, 1011, 1014, 1102, 1191 |
| BccI | CCATC | 5 cut(s) | 25, 488, 771, 821, 1235 |
| BciT130I | CCWGG | 1 cut(s) | 744 |
| BcnI | CCSGG | 2 cut(s) | 621, 622 |
| BcoDI | GTCTC | 1 cut(s) | 59 |
| BfaI | CTAG | 3 cut(s) | 237, 542, 969 |
| BfoI | RGCGCY | 1 cut(s) | 1185 |
| BfrI | CTTAAG | 1 cut(s) | 415 |
| BfuAI | ACCTGC | 1 cut(s) | 1291 |
| BglII | AGATCT | 1 cut(s) | 1152 |
| BisI | GCNGC | 8 cut(s) | 156, 332, 963, 990, 1000, 1003, 1091, 1180 |
| BlsI | GCNGC | 8 cut(s) | 157, 333, 964, 991, 1001, 1004, 1092, 1181 |
| BmcAI | AGTACT | 1 cut(s) | 1142 |
| Bme1390I | CCNGG | 3 cut(s) | 621, 622, 744 |
| Bme18I | GGWCC | 1 cut(s) | 746 |
| BmeT110I | CYCGRG | 1 cut(s) | 620 |
| BmgT120I | GGNCC | 3 cut(s) | 746, 1107, 1108 |
| BmiI | GGNNCC | 1 cut(s) | 1109 |
| BmrFI | CCNGG | 3 cut(s) | 621, 622, 744 |
| BmsI | GCATC | 2 cut(s) | 102, 709 |
| BpiI | GAAGAC | 1 cut(s) | 264 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1280, 1312 |
| Bpu10I | CCTNAGC | 2 cut(s) | 786, 1416 |
| BpuEI | CTTGAG | 2 cut(s) | 633, 1115 |
| BpuMI | CCSGG | 2 cut(s) | 621, 622 |
| BsaJI | CCNNGG | 2 cut(s) | 620, 1044 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 774, 804 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 671, 743, 1397 |
| Bse118I | RCCGGY | 1 cut(s) | 664 |
| Bse1I | ACTGG | 3 cut(s) | 159, 288, 376 |
| BseBI | CCWGG | 1 cut(s) | 744 |
| BseDI | CCNNGG | 2 cut(s) | 620, 1044 |
| BseGI | GGATG | 2 cut(s) | 358, 1227 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 671, 743, 1397 |
| BseMII | CTCAG | 3 cut(s) | 777, 1278, 1338 |
| BseNI | ACTGG | 3 cut(s) | 159, 288, 376 |
| BseRI | GAGGAG | 1 cut(s) | 1175 |
| BseSI | GKGCMC | 1 cut(s) | 1111 |
| BseXI | GCAGC | 6 cut(s) | 343, 1001, 1011, 1014, 1102, 1191 |
| BsgI | GTGCAG | 2 cut(s) | 159, 741 |
| Bsh1236I | CGCG | 1 cut(s) | 268 |
| BshFI | GGCC | 4 cut(s) | 158, 668, 965, 1109 |
| BsiHKAI | GWGCWC | 1 cut(s) | 792 |
| BsiHKCI | CYCGRG | 1 cut(s) | 620 |
| BsiSI | CCGG | 2 cut(s) | 621, 665 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 671, 743, 1397 |
| BsmAI | GTCTC | 1 cut(s) | 59 |
| BsmI | GAATGC | 3 cut(s) | 170, 777, 1032 |
| BsnI | GGCC | 4 cut(s) | 158, 668, 965, 1109 |
| BsoBI | CYCGRG | 1 cut(s) | 620 |
| Bsp120I | GGGCCC | 1 cut(s) | 1107 |
| Bsp1286I | GDGCHC | 2 cut(s) | 792, 1111 |
| Bsp143I | GATC | 5 cut(s) | 233, 460, 580, 1129, 1152 |
| BspACI | CCGC | 3 cut(s) | 155, 268, 962 |
| BspANI | GGCC | 4 cut(s) | 158, 668, 965, 1109 |
| BspCNI | CTCAG | 3 cut(s) | 778, 1279, 1339 |
| BspFNI | CGCG | 1 cut(s) | 268 |
| BspHI | TCATGA | 2 cut(s) | 465, 867 |
| BspLI | GGNNCC | 1 cut(s) | 1109 |
| BspMI | ACCTGC | 1 cut(s) | 1291 |
| BspPI | GGATC | 2 cut(s) | 241, 468 |
| BspTI | CTTAAG | 1 cut(s) | 415 |
| BsrFI | RCCGGY | 1 cut(s) | 664 |
| BsrI | ACTGG | 3 cut(s) | 159, 288, 376 |
| BssAI | RCCGGY | 1 cut(s) | 664 |
| BssECI | CCNNGG | 2 cut(s) | 620, 1044 |
| BssMI | GATC | 5 cut(s) | 233, 460, 580, 1129, 1152 |
| Bst2UI | CCWGG | 1 cut(s) | 744 |
| Bst4CI | ACNGT | 1 cut(s) | 570 |
| Bst6I | CTCTTC | 1 cut(s) | 1377 |
| BstAFI | CTTAAG | 1 cut(s) | 415 |
| BstC8I | GCNNGC | 5 cut(s) | 178, 756, 1058, 1177, 1360 |
| BstDEI | CTNAG | 4 cut(s) | 786, 1287, 1347, 1416 |
| BstF5I | GGATG | 2 cut(s) | 358, 1227 |
| BstFNI | CGCG | 1 cut(s) | 268 |
| BstH2I | RGCGCY | 1 cut(s) | 1185 |
| BstHHI | GCGC | 2 cut(s) | 1056, 1184 |
| BstKTI | GATC | 5 cut(s) | 236, 463, 583, 1132, 1155 |
| BstMAI | GTCTC | 1 cut(s) | 59 |
| BstMBI | GATC | 5 cut(s) | 233, 460, 580, 1129, 1152 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 796, 839, 1090, 1181 |
| BstNI | CCWGG | 1 cut(s) | 744 |
| BstNSI | RCATGY | 2 cut(s) | 1060, 1362 |
| BstSCI | CCNGG | 3 cut(s) | 619, 620, 742 |
| BstSLI | GKGCMC | 1 cut(s) | 1111 |
| BstUI | CGCG | 1 cut(s) | 268 |
| BstV1I | GCAGC | 6 cut(s) | 343, 1001, 1011, 1014, 1102, 1191 |
| BstV2I | GAAGAC | 1 cut(s) | 264 |
| BstX2I | RGATCY | 3 cut(s) | 233, 460, 1152 |
| BstYI | RGATCY | 3 cut(s) | 233, 460, 1152 |
| BsuRI | GGCC | 4 cut(s) | 158, 668, 965, 1109 |
| BtgZI | GCGATG | 2 cut(s) | 790, 1194 |
| BtsCI | GGATG | 2 cut(s) | 358, 1227 |
| BtsI | GCAGTG | 1 cut(s) | 1345 |
| BtsIMutI | CAGTG | 2 cut(s) | 166, 1345 |
| BveI | ACCTGC | 1 cut(s) | 1291 |
| Cac8I | GCNNGC | 5 cut(s) | 178, 756, 1058, 1177, 1360 |
| CciI | TCATGA | 2 cut(s) | 465, 867 |
| CfoI | GCGC | 2 cut(s) | 1056, 1184 |
| Cfr10I | RCCGGY | 1 cut(s) | 664 |
| Cfr13I | GGNCC | 3 cut(s) | 746, 1107, 1108 |
| Cfr9I | CCCGGG | 1 cut(s) | 620 |
| CseI | GACGC | 1 cut(s) | 1285 |
| Csp6I | GTAC | 4 cut(s) | 53, 96, 285, 1141 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1185, 1220 |
| CviQI | GTAC | 4 cut(s) | 53, 96, 285, 1141 |
| DdeI | CTNAG | 4 cut(s) | 786, 1287, 1347, 1416 |
| DpnI | GATC | 5 cut(s) | 235, 462, 582, 1131, 1154 |
| DpnII | GATC | 5 cut(s) | 233, 460, 580, 1129, 1152 |
| EaeI | YGGCCR | 2 cut(s) | 156, 666 |
| Eam1104I | CTCTTC | 1 cut(s) | 1377 |
| EarI | CTCTTC | 1 cut(s) | 1377 |
| Ecl136II | GAGCTC | 1 cut(s) | 790 |
| Eco24I | GRGCYC | 2 cut(s) | 792, 1111 |
| Eco47I | GGWCC | 1 cut(s) | 746 |
| Eco53kI | GAGCTC | 1 cut(s) | 790 |
| Eco57I | CTGAAG | 2 cut(s) | 996, 1097 |
| Eco88I | CYCGRG | 1 cut(s) | 620 |
| EcoICRI | GAGCTC | 1 cut(s) | 790 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1107, 1108 |
| EcoRII | CCWGG | 1 cut(s) | 742 |
| EcoT22I | ATGCAT | 1 cut(s) | 117 |
| EcoT38I | GRGCYC | 2 cut(s) | 792, 1111 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 462, 494 |
| Fnu4HI | GCNGC | 8 cut(s) | 156, 332, 963, 990, 1000, 1003, 1091, 1180 |
| FokI | GGATG | 2 cut(s) | 345, 1214 |
| FriOI | GRGCYC | 2 cut(s) | 792, 1111 |
| Fsp4HI | GCNGC | 8 cut(s) | 156, 332, 963, 990, 1000, 1003, 1091, 1180 |
| FspBI | CTAG | 3 cut(s) | 237, 542, 969 |
| FspI | TGCGCA | 1 cut(s) | 1055 |
| GlaI | GCGC | 2 cut(s) | 1055, 1183 |
| GluI | GCNGC | 8 cut(s) | 156, 332, 963, 990, 1000, 1003, 1091, 1180 |
| HaeII | RGCGCY | 1 cut(s) | 1185 |
| HaeIII | GGCC | 4 cut(s) | 158, 668, 965, 1109 |
| HapII | CCGG | 2 cut(s) | 621, 665 |
| HgaI | GACGC | 1 cut(s) | 1285 |
| HhaI | GCGC | 2 cut(s) | 1056, 1184 |
| Hin6I | GCGC | 2 cut(s) | 1054, 1182 |
| HinP1I | GCGC | 2 cut(s) | 1054, 1182 |
| HincII | GTYRAC | 1 cut(s) | 817 |
| HindII | GTYRAC | 1 cut(s) | 817 |
| HindIII | AAGCTT | 1 cut(s) | 821 |
| HinfI | GANTC | 6 cut(s) | 31, 203, 395, 1289, 1295, 1343 |
| HpaI | GTTAAC | 1 cut(s) | 817 |
| HpaII | CCGG | 2 cut(s) | 621, 665 |
| HphI | GGTGA | 5 cut(s) | 177, 648, 725, 1033, 1296 |
| Hpy166II | GTNNAC | 1 cut(s) | 817 |
| Hpy188I | TCNGA | 8 cut(s) | 139, 319, 457, 580, 976, 1074, 1294, 1348 |
| Hpy188III | TCNNGA | 3 cut(s) | 466, 868, 1379 |
| Hpy8I | GTNNAC | 1 cut(s) | 817 |
| Hpy99I | CGWCG | 1 cut(s) | 1279 |
| HpyAV | CCTTC | 4 cut(s) | 134, 759, 1121, 1260 |
| HpyCH4III | ACNGT | 1 cut(s) | 570 |
| HpyCH4IV | ACGT | 1 cut(s) | 1375 |
| HpyCH4V | TGCA | 9 cut(s) | 115, 176, 487, 758, 1060, 1084, 1136, 1147, 1362 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 796, 839, 1090, 1181 |
| HpyF3I | CTNAG | 4 cut(s) | 786, 1287, 1347, 1416 |
| HpySE526I | ACGT | 1 cut(s) | 1375 |
| HspAI | GCGC | 2 cut(s) | 1054, 1182 |
| KspAI | GTTAAC | 1 cut(s) | 817 |
| Kzo9I | GATC | 5 cut(s) | 233, 460, 580, 1129, 1152 |
| LmnI | GCTCC | 3 cut(s) | 795, 1029, 1162 |
| Lsp1109I | GCAGC | 6 cut(s) | 343, 1001, 1011, 1014, 1102, 1191 |
| LweI | GCATC | 2 cut(s) | 102, 709 |
| MaeI | CTAG | 3 cut(s) | 237, 542, 969 |
| MaeII | ACGT | 1 cut(s) | 1375 |
| MaeIII | GTNAC | 7 cut(s) | 79, 183, 419, 533, 564, 731, 1010 |
| MalI | GATC | 5 cut(s) | 235, 462, 582, 1131, 1154 |
| MboI | GATC | 5 cut(s) | 233, 460, 580, 1129, 1152 |
| MflI | RGATCY | 3 cut(s) | 233, 460, 1152 |
| MhlI | GDGCHC | 2 cut(s) | 792, 1111 |
| MluCI | AATT | 5 cut(s) | 340, 481, 557, 642, 1222 |
| MlyI | GAGTC | 3 cut(s) | 40, 1289, 1298 |
| MmeI | TCCRAC | 1 cut(s) | 389 |
| Mph1103I | ATGCAT | 1 cut(s) | 117 |
| MseI | TTAA | 5 cut(s) | 416, 480, 816, 860, 884 |
| MslI | CAYNNNNRTG | 3 cut(s) | 492, 1061, 1357 |
| MspA1I | CMGCKG | 1 cut(s) | 1262 |
| MspCI | CTTAAG | 1 cut(s) | 415 |
| MspI | CCGG | 2 cut(s) | 621, 665 |
| MspR9I | CCNGG | 3 cut(s) | 621, 622, 744 |
| Mva1269I | GAATGC | 3 cut(s) | 170, 777, 1032 |
| MvaI | CCWGG | 1 cut(s) | 744 |
| MvnI | CGCG | 1 cut(s) | 268 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 796, 839, 1090, 1181 |
| NciI | CCSGG | 2 cut(s) | 621, 622 |
| NdeII | GATC | 5 cut(s) | 233, 460, 580, 1129, 1152 |
| NlaIV | GGNNCC | 1 cut(s) | 1109 |
| NmeAIII | GCCGAG | 1 cut(s) | 307 |
| NmuCI | GTSAC | 6 cut(s) | 79, 183, 419, 533, 731, 1010 |
| NsbI | TGCGCA | 1 cut(s) | 1055 |
| NsiI | ATGCAT | 1 cut(s) | 117 |
| NspI | RCATGY | 2 cut(s) | 1060, 1362 |
| PaeI | GCATGC | 2 cut(s) | 1060, 1362 |
| PagI | TCATGA | 2 cut(s) | 465, 867 |
| PctI | GAATGC | 3 cut(s) | 170, 777, 1032 |
| PfeI | GAWTC | 3 cut(s) | 203, 395, 1343 |
| PfoI | TCCNGGA | 1 cut(s) | 742 |
| PkrI | GCNGC | 8 cut(s) | 157, 333, 964, 991, 1001, 1004, 1092, 1181 |
| PleI | GAGTC | 3 cut(s) | 39, 1289, 1297 |
| PpsI | GAGTC | 3 cut(s) | 39, 1289, 1297 |
| Psp124BI | GAGCTC | 1 cut(s) | 792 |
| Psp6I | CCWGG | 1 cut(s) | 742 |
| PspGI | CCWGG | 1 cut(s) | 742 |
| PspN4I | GGNNCC | 1 cut(s) | 1109 |
| PspOMI | GGGCCC | 1 cut(s) | 1107 |
| PspPI | GGNCC | 3 cut(s) | 746, 1107, 1108 |
| PsuI | RGATCY | 3 cut(s) | 233, 460, 1152 |
| PvuII | CAGCTG | 1 cut(s) | 1262 |
| RsaI | GTAC | 4 cut(s) | 54, 97, 286, 1142 |
| RsaNI | GTAC | 4 cut(s) | 53, 96, 285, 1141 |
| RseI | CAYNNNNRTG | 3 cut(s) | 492, 1061, 1357 |
| SacI | GAGCTC | 1 cut(s) | 792 |
| SaqAI | TTAA | 5 cut(s) | 416, 480, 816, 860, 884 |
| SatI | GCNGC | 8 cut(s) | 156, 332, 963, 990, 1000, 1003, 1091, 1180 |
| Sau3AI | GATC | 5 cut(s) | 233, 460, 580, 1129, 1152 |
| Sau96I | GGNCC | 3 cut(s) | 746, 1107, 1108 |
| ScaI | AGTACT | 1 cut(s) | 1142 |
| SchI | GAGTC | 3 cut(s) | 40, 1289, 1298 |
| ScrFI | CCNGG | 3 cut(s) | 621, 622, 744 |
| SduI | GDGCHC | 2 cut(s) | 792, 1111 |
| SfaNI | GCATC | 2 cut(s) | 102, 709 |
| SinI | GGWCC | 1 cut(s) | 746 |
| SmaI | CCCGGG | 1 cut(s) | 622 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 492, 1061, 1357 |
| SmlI | CTYRAG | 3 cut(s) | 415, 648, 1094 |
| SmoI | CTYRAG | 3 cut(s) | 415, 648, 1094 |
| SphI | GCATGC | 2 cut(s) | 1060, 1362 |
| Sse9I | AATT | 5 cut(s) | 340, 481, 557, 642, 1222 |
| SsiI | CCGC | 3 cut(s) | 155, 268, 962 |
| SspI | AATATT | 1 cut(s) | 226 |
| SspMI | CTAG | 3 cut(s) | 237, 542, 969 |
| SstI | GAGCTC | 1 cut(s) | 792 |
| StyD4I | CCNGG | 3 cut(s) | 619, 620, 742 |
| TaaI | ACNGT | 1 cut(s) | 570 |
| TaiI | ACGT | 1 cut(s) | 1378 |
| TaqI | TCGA | 2 cut(s) | 229, 311 |
| TasI | AATT | 5 cut(s) | 340, 481, 557, 642, 1222 |
| TatI | WGTACW | 2 cut(s) | 95, 1140 |
| TauI | GCSGC | 2 cut(s) | 158, 965 |
| TfiI | GAWTC | 3 cut(s) | 203, 395, 1343 |
| Tru1I | TTAA | 5 cut(s) | 416, 480, 816, 860, 884 |
| Tru9I | TTAA | 5 cut(s) | 416, 480, 816, 860, 884 |
| TscAI | CASTG | 2 cut(s) | 166, 1345 |
| TseFI | GTSAC | 6 cut(s) | 79, 183, 419, 533, 731, 1010 |
| TseI | GCWGC | 6 cut(s) | 331, 989, 999, 1002, 1090, 1179 |
| Tsp45I | GTSAC | 6 cut(s) | 79, 183, 419, 533, 731, 1010 |
| TspDTI | ATGAA | 8 cut(s) | 17, 181, 297, 482, 503, 654, 884, 1242 |
| TspGWI | ACGGA | 2 cut(s) | 617, 1029 |
| TspMI | CCCGGG | 1 cut(s) | 620 |
| TspRI | CASTG | 2 cut(s) | 166, 1345 |
| Vha464I | CTTAAG | 1 cut(s) | 415 |
| VpaK11BI | GGWCC | 1 cut(s) | 746 |
| XapI | RAATTY | 2 cut(s) | 340, 642 |
| XceI | RCATGY | 2 cut(s) | 1060, 1362 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 774 |
| XmaI | CCCGGG | 1 cut(s) | 620 |
| XspI | CTAG | 3 cut(s) | 237, 542, 969 |
| ZrmI | AGTACT | 1 cut(s) | 1142 |
| Zsp2I | ATGCAT | 1 cut(s) | 117 |