pycom17g15110
MYB Family

MYB-CC type transfactor, LHEQLE motif

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Reverse (-)
12916772 .. 12919278
2507 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g15110.6

Sequence Viewer

Length: 1398 bp
ATGAGTCACCATGGTATCATCTCTGTAGCACAAAGTGAGACGACAAAAGGAGTCAAACCGTCATACTGTAATTCCCCTTCCCCAATACATGATTTTTTGGGTAGTGAATCAGAAGGCAGGAGTTTCACAGCCAGTGATTGTTCATCTCCACGCGTGTCTCCTTTCATACGGGAAGAATCTTGTGGACCTCCTACTAATATGCAAGGATCCCCTGTTCAGCATTCCAAGAGCGCGTTTTCACGTTCTTCTGTTTTCTGTACCAGTTTGTATCAGTCTTCTTCATCGTGCCCCGAAACCTCTTGTCAGCTTGGGAATTTGCCATTTCTTCCACATCCTCCAACATATGGCCAGTCCATTTCTGCTGTTGATTCAAAATCTCCATCGCTTTTTAGCGAGGATAAAAGCAATCAATATGATGACAAACAATCAGAGGATCTCATGAAAGACTTTCGTAATTTGCATGGAGATTCCTCACACGGAAACTTCCATGGTATTAGTTATGGAAGTGACACTCTAGCACTTACAGAACAATTAGAGTTACAATTTTTGTCAGATCAACTTGACATAGCTATCACGGACAATGGAGAGAATCCTGGGCTTGACGAAATATATGAGAATCCTCAACCGTCACCAAAACCGGATATAGGACTGACAGCATGTAGTGAGGGTTGTCGCTTGACAACACCGCTCGTTGATGCTCTTACAAGTCACCCCTCTCTCGGGCCAGCCTCCGCACATAGGCCAAGAATGCGATGGACGCCTGAACTCCATGAGCGTTTTATAGAGGCCGTTAACAGGCTTGATGGGGCTGAAAAGGCCACTCCGAAAGGTGTATTAAAGGCTATGAATGTTGAGGGCCTAACCATTTATCATGTGAAAAGCCACTTACAGAAATACCGACTTGCCAGGTATATGCCAGAGAAAAAGGAAGATAAGAAGGCCTCTAGCTCTGAAGAAAAGAAAGCAACTTCAACCATTAACGAAAGCGATGGACGTAGAAAAGGGAGCATTCACATCACCGAGGCTCTGCGCATGCAAATGGAAGTTCAGAAGCAACTGCATGAGCAGCTTGAGGTTCAAAGGGTCCTTCAGCTACGCATAGAGGAACACGCAAAATACTTGCAGAAGATCTTGGAGAATCAGCAGAAAGCCGGCAGTGCTTTACTTTCTCCGCAAGCTTTGTCATCACTGACGATTAATTCCGCTCAGGTGTCCGCACAACTGCCTTCATCAACCTGTGCATCACCCCCACAACCTGCCCTGTCTGACTCATCATCGCCTCAATCACTAAAGCATAAAGCTACTGACTGTAGTGACTCTGAGCCGCAGACGTGTGCCAAAATGCCCCGTCTTGAAGAGAGACCGGATGAGGGTGTGGTCGAAAATCCTCAATTATAA

Protein Analysis

466

Amino Acids

51.0

Weight (kDa)

5.81

Isoelectric Point (pI)

67.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1396
Acc16I TGCGCA 1 cut(s) 1031
Acc36I ACCTGC 1 cut(s) 1264
AccB7I CCANNNNNTGG 1 cut(s) 344
AccBSI CCGCTC 2 cut(s) 688, 1205
AccII CGCG 2 cut(s) 153, 233
AciI CCGC 6 cut(s) 686, 732, 1172, 1203, 1215, 1325
AclWI GGATC 3 cut(s) 201, 214, 441
AcoI YGGCCR 1 cut(s) 346
AcsI RAATTY 1 cut(s) 313
AcuI CTGAAG 2 cut(s) 972, 1073
AcyI GRCGYC 1 cut(s) 758
AdeI CACNNNGTG 1 cut(s) 35
AfaI GTAC 1 cut(s) 259
AfiI CCNNNNNNNGG 7 cut(s) 344, 644, 719, 720, 738, 795, 1370
AflIII ACRYGT 2 cut(s) 151, 1331
AgsI TTSAA 4 cut(s) 372, 972, 1079, 1355
AjiI CACGTC 1 cut(s) 1332
AjnI CCWGG 2 cut(s) 592, 905
AloI GAACNNNNNNTCC 2 cut(s) 198, 230
AluBI AGCT 7 cut(s) 307, 569, 948, 1069, 1093, 1178, 1301
AluI AGCT 7 cut(s) 307, 569, 948, 1069, 1093, 1178, 1301
Alw26I GTCTC 3 cut(s) 32, 162, 1354
AlwI GGATC 3 cut(s) 201, 214, 441
Ama87I CYCGRG 1 cut(s) 719
AoxI GGCC 7 cut(s) 346, 722, 740, 786, 816, 856, 939
ApeKI GCWGC 1 cut(s) 1066
ApoI RAATTY 1 cut(s) 313
AseI ATTAAT 1 cut(s) 1197
AspLEI GCGC 2 cut(s) 233, 1032
AspS9I GGNCC 4 cut(s) 185, 722, 856, 1084
AsuHPI GGTGA 4 cut(s) 621, 701, 1009, 1236
AvaI CYCGRG 1 cut(s) 719
AvaII GGWCC 2 cut(s) 185, 1084
BaeGI GKGCMC 1 cut(s) 290
BaeI ACNNNNGTAYC 1 cut(s) 31
BalI TGGCCA 1 cut(s) 348
BamHI GGATCC 1 cut(s) 206
BarI GAAGNNNNNNTAC 2 cut(s) 61, 93
BbsI GAAGAC 1 cut(s) 267
BbvI GCAGC 1 cut(s) 1078
BccI CCATC 4 cut(s) 388, 747, 797, 983
BceAI ACGGC 1 cut(s) 773
BciT130I CCWGG 2 cut(s) 594, 907
BcoDI GTCTC 3 cut(s) 32, 162, 1354
BfaI CTAG 2 cut(s) 515, 945
BfmI CTRYAG 2 cut(s) 24, 1309
BfuAI ACCTGC 1 cut(s) 1264
BglII AGATCT 1 cut(s) 1128
BisI GCNGC 2 cut(s) 1067, 1325
BlsI GCNGC 2 cut(s) 1068, 1326
Bme1390I CCNGG 2 cut(s) 594, 907
Bme18I GGWCC 2 cut(s) 185, 1084
BmeT110I CYCGRG 1 cut(s) 719
BmgBI CACGTC 1 cut(s) 1332
BmgT120I GGNCC 4 cut(s) 185, 722, 856, 1084
BmiI GGNNCC 2 cut(s) 208, 1085
BmrFI CCNGG 2 cut(s) 594, 907
BmsI GCATC 2 cut(s) 685, 1250
BpiI GAAGAC 1 cut(s) 267
Bpu10I CCTNAGC 1 cut(s) 1206
BpuEI CTTGAG 1 cut(s) 1091
BsaHI GRCGYC 1 cut(s) 758
BsaI GGTCTC 1 cut(s) 1354
BsaJI CCNNGG 4 cut(s) 10, 487, 593, 1020
BsaWI WCCGGW 2 cut(s) 637, 1363
Bsc4I CCNNNNNNNGG 7 cut(s) 344, 644, 719, 720, 738, 795, 1370
Bse118I RCCGGY 1 cut(s) 1151
Bse1I ACTGG 3 cut(s) 132, 261, 349
BseBI CCWGG 2 cut(s) 594, 907
BseDI CCNNGG 4 cut(s) 10, 487, 593, 1020
BseGI GGATG 2 cut(s) 331, 1372
BseLI CCNNNNNNNGG 7 cut(s) 344, 644, 719, 720, 738, 795, 1370
BseMII CTCAG 2 cut(s) 1220, 1311
BseNI ACTGG 3 cut(s) 132, 261, 349
BseSI GKGCMC 1 cut(s) 290
BseXI GCAGC 1 cut(s) 1078
Bsh1236I CGCG 2 cut(s) 153, 233
BshFI GGCC 7 cut(s) 348, 724, 742, 788, 818, 858, 941
BsiHKCI CYCGRG 1 cut(s) 719
BsiSI CCGG 3 cut(s) 638, 1152, 1364
BslI CCNNNNNNNGG 7 cut(s) 344, 644, 719, 720, 738, 795, 1370
BsmAI GTCTC 3 cut(s) 32, 162, 1354
BsmBI CGTCTC 1 cut(s) 32
BsmI GAATGC 3 cut(s) 220, 753, 1008
BsnI GGCC 7 cut(s) 348, 724, 742, 788, 818, 858, 941
Bso31I GGTCTC 1 cut(s) 1354
BsoBI CYCGRG 1 cut(s) 719
Bsp1286I GDGCHC 1 cut(s) 290
Bsp143I GATC 4 cut(s) 206, 433, 553, 1128
Bsp19I CCATGG 2 cut(s) 10, 487
BspACI CCGC 6 cut(s) 686, 732, 1172, 1203, 1215, 1325
BspANI GGCC 7 cut(s) 348, 724, 742, 788, 818, 858, 941
BspCNI CTCAG 2 cut(s) 1219, 1312
BspFNI CGCG 2 cut(s) 153, 233
BspHI TCATGA 1 cut(s) 438
BspLI GGNNCC 2 cut(s) 208, 1085
BspMI ACCTGC 1 cut(s) 1264
BspPI GGATC 3 cut(s) 201, 214, 441
BspTNI GGTCTC 1 cut(s) 1354
BsrBI CCGCTC 2 cut(s) 688, 1205
BsrFI RCCGGY 1 cut(s) 1151
BsrI ACTGG 3 cut(s) 132, 261, 349
BssAI RCCGGY 1 cut(s) 1151
BssECI CCNNGG 4 cut(s) 10, 487, 593, 1020
BssMI GATC 4 cut(s) 206, 433, 553, 1128
BssNI GRCGYC 1 cut(s) 758
BssT1I CCWWGG 2 cut(s) 10, 487
Bst2UI CCWGG 2 cut(s) 594, 907
Bst4CI ACNGT 4 cut(s) 60, 68, 627, 1310
Bst6I CTCTTC 1 cut(s) 1350
BstACI GRCGYC 1 cut(s) 758
BstC8I GCNNGC 4 cut(s) 726, 1034, 1153, 1176
BstDEI CTNAG 2 cut(s) 1206, 1320
BstDSI CCRYGG 2 cut(s) 10, 487
BstF5I GGATG 2 cut(s) 331, 1372
BstFNI CGCG 2 cut(s) 153, 233
BstHHI GCGC 2 cut(s) 233, 1032
BstKTI GATC 4 cut(s) 209, 436, 556, 1131
BstMAI GTCTC 3 cut(s) 32, 162, 1354
BstMBI GATC 4 cut(s) 206, 433, 553, 1128
BstMWI GCNNNNNNNGC 5 cut(s) 748, 757, 815, 1066, 1157
BstNI CCWGG 2 cut(s) 594, 907
BstNSI RCATGY 2 cut(s) 660, 1036
BstSCI CCNGG 2 cut(s) 592, 905
BstSFI CTRYAG 2 cut(s) 24, 1309
BstSLI GKGCMC 1 cut(s) 290
BstUI CGCG 2 cut(s) 153, 233
BstV1I GCAGC 1 cut(s) 1078
BstV2I GAAGAC 1 cut(s) 267
BstX2I RGATCY 3 cut(s) 206, 433, 1128
BstYI RGATCY 3 cut(s) 206, 433, 1128
BsuRI GGCC 7 cut(s) 348, 724, 742, 788, 818, 858, 941
BtgI CCRYGG 2 cut(s) 10, 487
BtgZI GCGATG 4 cut(s) 366, 766, 1002, 1260
BtrI CACGTC 1 cut(s) 1332
BtsCI GGATG 2 cut(s) 331, 1372
BtsI GCAGTG 1 cut(s) 1162
BtsIMutI CAGTG 3 cut(s) 139, 1162, 1187
BveI ACCTGC 1 cut(s) 1264
Cac8I GCNNGC 4 cut(s) 726, 1034, 1153, 1176
CciI TCATGA 1 cut(s) 438
CfoI GCGC 2 cut(s) 233, 1032
Cfr10I RCCGGY 1 cut(s) 1151
Cfr13I GGNCC 4 cut(s) 185, 722, 856, 1084
CseI GACGC 1 cut(s) 766
Csp6I GTAC 1 cut(s) 258
CviQI GTAC 1 cut(s) 258
DdeI CTNAG 2 cut(s) 1206, 1320
DpnI GATC 4 cut(s) 208, 435, 555, 1130
DpnII GATC 4 cut(s) 206, 433, 553, 1128
DraIII CACNNNGTG 1 cut(s) 35
EaeI YGGCCR 1 cut(s) 346
Eam1104I CTCTTC 1 cut(s) 1350
EarI CTCTTC 1 cut(s) 1350
Eco130I CCWWGG 2 cut(s) 10, 487
Eco147I AGGCCT 1 cut(s) 941
Eco31I GGTCTC 1 cut(s) 1354
Eco47I GGWCC 2 cut(s) 185, 1084
Eco57I CTGAAG 2 cut(s) 972, 1073
Eco88I CYCGRG 1 cut(s) 719
EcoO109I RGGNCCY 2 cut(s) 856, 1084
EcoRII CCWGG 2 cut(s) 592, 905
EcoT14I CCWWGG 2 cut(s) 10, 487
ErhI CCWWGG 2 cut(s) 10, 487
Esp3I CGTCTC 1 cut(s) 32
FauNDI CATATG 1 cut(s) 343
Fnu4HI GCNGC 2 cut(s) 1067, 1325
FokI GGATG 2 cut(s) 318, 1379
Fsp4HI GCNGC 2 cut(s) 1067, 1325
FspBI CTAG 2 cut(s) 515, 945
FspI TGCGCA 1 cut(s) 1031
GlaI GCGC 2 cut(s) 232, 1031
GluI GCNGC 2 cut(s) 1067, 1325
HaeIII GGCC 7 cut(s) 348, 724, 742, 788, 818, 858, 941
HapII CCGG 3 cut(s) 638, 1152, 1364
HgaI GACGC 1 cut(s) 766
HhaI GCGC 2 cut(s) 233, 1032
Hin1I GRCGYC 1 cut(s) 758
Hin6I GCGC 2 cut(s) 231, 1030
HinP1I GCGC 2 cut(s) 231, 1030
HincII GTYRAC 1 cut(s) 793
HindII GTYRAC 1 cut(s) 793
HindIII AAGCTT 1 cut(s) 1176
HpaI GTTAAC 1 cut(s) 793
HpaII CCGG 3 cut(s) 638, 1152, 1364
HphI GGTGA 4 cut(s) 621, 701, 1009, 1236
Hpy166II GTNNAC 2 cut(s) 185, 793
Hpy188I TCNGA 8 cut(s) 112, 430, 553, 825, 952, 1050, 1267, 1321
Hpy188III TCNNGA 2 cut(s) 439, 1352
Hpy8I GTNNAC 2 cut(s) 185, 793
HpyAV CCTTC 5 cut(s) 87, 107, 931, 1097, 1236
HpyCH4III ACNGT 4 cut(s) 60, 68, 627, 1310
HpyCH4IV ACGT 3 cut(s) 241, 994, 1331
HpyCH4V TGCA 6 cut(s) 202, 460, 1036, 1060, 1123, 1241
HpyF10VI GCNNNNNNNGC 5 cut(s) 748, 757, 815, 1066, 1157
HpyF3I CTNAG 2 cut(s) 1206, 1320
HpySE526I ACGT 3 cut(s) 241, 994, 1331
Hsp92I GRCGYC 1 cut(s) 758
HspAI GCGC 2 cut(s) 231, 1030
KroI GCCGGC 1 cut(s) 1151
KroNI GCCGGC 1 cut(s) 1153
KspAI GTTAAC 1 cut(s) 793
Kzo9I GATC 4 cut(s) 206, 433, 553, 1128
LmnI GCTCC 1 cut(s) 1005
Lsp1109I GCAGC 1 cut(s) 1078
LweI GCATC 2 cut(s) 685, 1250
MaeI CTAG 2 cut(s) 515, 945
MaeII ACGT 3 cut(s) 241, 994, 1331
MaeIII GTNAC 6 cut(s) 5, 506, 537, 627, 707, 1313
MalI GATC 4 cut(s) 208, 435, 555, 1130
MbiI CCGCTC 2 cut(s) 688, 1205
MboI GATC 4 cut(s) 206, 433, 553, 1128
MboII GAAGA 9 cut(s) 185, 237, 267, 270, 317, 941, 965, 1138, 1367
MflI RGATCY 3 cut(s) 206, 433, 1128
MhlI GDGCHC 1 cut(s) 290
MlsI TGGCCA 1 cut(s) 348
MluCI AATT 7 cut(s) 70, 313, 454, 530, 542, 1198, 1391
MluI ACGCGT 1 cut(s) 151
MluNI TGGCCA 1 cut(s) 348
MlyI GAGTC 4 cut(s) 13, 60, 1262, 1310
MmeI TCCRAC 1 cut(s) 362
Mox20I TGGCCA 1 cut(s) 348
MroNI GCCGGC 1 cut(s) 1151
MscI TGGCCA 1 cut(s) 348
MseI TTAA 4 cut(s) 792, 836, 978, 1197
MslI CAYNNNNRTG 1 cut(s) 1037
Msp20I TGGCCA 1 cut(s) 348
MspI CCGG 3 cut(s) 638, 1152, 1364
MspR9I CCNGG 2 cut(s) 594, 907
Mva1269I GAATGC 3 cut(s) 220, 753, 1008
MvaI CCWGG 2 cut(s) 594, 907
MvnI CGCG 2 cut(s) 153, 233
MwoI GCNNNNNNNGC 5 cut(s) 748, 757, 815, 1066, 1157
NaeI GCCGGC 1 cut(s) 1153
NcoI CCATGG 2 cut(s) 10, 487
NdeI CATATG 1 cut(s) 343
NdeII GATC 4 cut(s) 206, 433, 553, 1128
NgoMIV GCCGGC 1 cut(s) 1151
NlaIV GGNNCC 2 cut(s) 208, 1085
NmuCI GTSAC 5 cut(s) 5, 506, 627, 707, 1313
NsbI TGCGCA 1 cut(s) 1031
NspI RCATGY 2 cut(s) 660, 1036
PaeI GCATGC 1 cut(s) 1036
PagI TCATGA 1 cut(s) 438
PceI AGGCCT 1 cut(s) 941
PctI GAATGC 3 cut(s) 220, 753, 1008
PdiI GCCGGC 1 cut(s) 1153
PfeI GAWTC 7 cut(s) 107, 176, 368, 467, 589, 616, 1138
PflMI CCANNNNNTGG 1 cut(s) 344
PkrI GCNGC 2 cut(s) 1068, 1326
PleI GAGTC 4 cut(s) 12, 59, 1262, 1310
PpsI GAGTC 4 cut(s) 12, 59, 1262, 1310
PpuMI RGGWCCY 1 cut(s) 1084
PshBI ATTAAT 1 cut(s) 1197
PsiI TTATAA 1 cut(s) 1396
Psp5II RGGWCCY 1 cut(s) 1084
Psp6I CCWGG 2 cut(s) 592, 905
PspGI CCWGG 2 cut(s) 592, 905
PspN4I GGNNCC 2 cut(s) 208, 1085
PspPI GGNCC 4 cut(s) 185, 722, 856, 1084
PspPPI RGGWCCY 1 cut(s) 1084
PsuI RGATCY 3 cut(s) 206, 433, 1128
RsaI GTAC 1 cut(s) 259
RsaNI GTAC 1 cut(s) 258
RseI CAYNNNNRTG 1 cut(s) 1037
SaqAI TTAA 4 cut(s) 792, 836, 978, 1197
SatI GCNGC 2 cut(s) 1067, 1325
Sau3AI GATC 4 cut(s) 206, 433, 553, 1128
Sau96I GGNCC 4 cut(s) 185, 722, 856, 1084
SchI GAGTC 4 cut(s) 13, 60, 1262, 1310
ScrFI CCNGG 2 cut(s) 594, 907
SduI GDGCHC 1 cut(s) 290
SfaNI GCATC 2 cut(s) 685, 1250
SfcI CTRYAG 2 cut(s) 24, 1309
SinI GGWCC 2 cut(s) 185, 1084
SmiMI CAYNNNNRTG 1 cut(s) 1037
SmlI CTYRAG 1 cut(s) 1070
SmoI CTYRAG 1 cut(s) 1070
SphI GCATGC 1 cut(s) 1036
Sse9I AATT 7 cut(s) 70, 313, 454, 530, 542, 1198, 1391
SseBI AGGCCT 1 cut(s) 941
SsiI CCGC 6 cut(s) 686, 732, 1172, 1203, 1215, 1325
SspMI CTAG 2 cut(s) 515, 945
StuI AGGCCT 1 cut(s) 941
StyD4I CCNGG 2 cut(s) 592, 905
StyI CCWWGG 2 cut(s) 10, 487
TaaI ACNGT 4 cut(s) 60, 68, 627, 1310
TaiI ACGT 3 cut(s) 244, 997, 1334
TaqI TCGA 1 cut(s) 1380
TasI AATT 7 cut(s) 70, 313, 454, 530, 542, 1198, 1391
TauI GCSGC 1 cut(s) 1327
TfiI GAWTC 7 cut(s) 107, 176, 368, 467, 589, 616, 1138
Tru1I TTAA 4 cut(s) 792, 836, 978, 1197
Tru9I TTAA 4 cut(s) 792, 836, 978, 1197
TscAI CASTG 3 cut(s) 139, 1162, 1194
TseFI GTSAC 5 cut(s) 5, 506, 627, 707, 1313
TseI GCWGC 1 cut(s) 1066
Tsp45I GTSAC 5 cut(s) 5, 506, 627, 707, 1313
TspDTI ATGAA 6 cut(s) 132, 154, 270, 455, 860, 1218
TspGWI ACGGA 2 cut(s) 492, 590
TspRI CASTG 3 cut(s) 139, 1162, 1194
Van91I CCANNNNNTGG 1 cut(s) 344
VpaK11BI GGWCC 2 cut(s) 185, 1084
VspI ATTAAT 1 cut(s) 1197
XapI RAATTY 1 cut(s) 313
XceI RCATGY 2 cut(s) 660, 1036
XcmI CCANNNNNNNNNTGG 1 cut(s) 750
XspI CTAG 2 cut(s) 515, 945
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.