MYB-CC type transfactor, LHEQLE motif
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G13040 AT3G13040 AT3G13040 |
| fragaria_vesca | FvH4_6g36430 FvH4_6g36430 FvH4_6g36430 |
| malus_domestica | MD09G1169000.v1.1 MD17G1157800.v1.1 |
| prunus_persica | Prupe.3G027400_v2.0.a1 Prupe.3G027400_v2.0.a1 Prupe.3G027400_v2.0.a1 Prupe.3G027400_v2.0.a1 Prupe.3G027400_v2.0.a1 Prupe.3G027400_v2.0.a1 Prupe.3G027400_v2.0.a1 Prupe.3G027400_v2.0.a1 Prupe.3G027400_v2.0.a1 Prupe.3G027400_v2.0.a1 Prupe.3G027400_v2.0.a1 |
| pyrus_communis | pycom09g08660 pycom17g15110 |
| rosa_chinensis | RchiOBHm_Chr2g0148421 |
| rosa_laevigata | RLG00000020349 |
| rosa_multiflora | Rmu_co8500471.1_g000001 Rmu_sc0007332.1_g000003 |
| rosa_roxburghii | Rroxscaffold_2G00098750 |
| rosa_rugosa | Rorug02G0406900 Rorug02G0407000 |
| rosa_samantha | Rh2AG465600 Rh2BG478800 Rh2CG452100 Rh2DG487600 |
| rosa_wichuraiana | Rw2G037950 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 1055 |
| AciI | CCGC | 2 cut(s) | 196, 775 |
| AcsI | RAATTY | 1 cut(s) | 148 |
| AcuI | CTGAAG | 3 cut(s) | 996, 1097, 1346 |
| AdeI | CACNNNGTG | 1 cut(s) | 62 |
| AfaI | GTAC | 5 cut(s) | 97, 286, 858, 920, 1142 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 109, 743, 744 |
| AflIII | ACRYGT | 2 cut(s) | 247, 680 |
| AgsI | TTSAA | 7 cut(s) | 245, 399, 729, 996, 1103, 1391, 1418 |
| AjnI | CCWGG | 2 cut(s) | 326, 742 |
| Alw21I | GWGCWC | 1 cut(s) | 260 |
| Alw26I | GTCTC | 2 cut(s) | 38, 1113 |
| Ama87I | CYCGRG | 2 cut(s) | 648, 941 |
| AoxI | GGCC | 2 cut(s) | 156, 746 |
| ApeKI | GCWGC | 7 cut(s) | 331, 989, 1090, 1246, 1286, 1337, 1340 |
| ApoI | RAATTY | 1 cut(s) | 148 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 473 |
| AspLEI | GCGC | 1 cut(s) | 1056 |
| AspS9I | GGNCC | 2 cut(s) | 157, 746 |
| AsuC2I | CCSGG | 1 cut(s) | 110 |
| AsuHPI | GGTGA | 4 cut(s) | 177, 623, 1296, 1305 |
| AvaI | CYCGRG | 2 cut(s) | 648, 941 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1258, 1290 |
| BbsI | GAAGAC | 2 cut(s) | 233, 294 |
| Bbv12I | GWGCWC | 1 cut(s) | 260 |
| BbvI | GCAGC | 7 cut(s) | 343, 976, 1102, 1258, 1273, 1324, 1327 |
| BccI | CCATC | 4 cut(s) | 497, 821, 1007, 1264 |
| BceAI | ACGGC | 1 cut(s) | 638 |
| BciT130I | CCWGG | 2 cut(s) | 328, 744 |
| BclI | TGATCA | 1 cut(s) | 580 |
| BcnI | CCSGG | 1 cut(s) | 110 |
| BcoDI | GTCTC | 2 cut(s) | 38, 1113 |
| BfaI | CTAG | 2 cut(s) | 237, 969 |
| BfmI | CTRYAG | 1 cut(s) | 1345 |
| BglII | AGATCT | 1 cut(s) | 1152 |
| BisI | GCNGC | 7 cut(s) | 332, 990, 1091, 1247, 1287, 1338, 1341 |
| BlsI | GCNGC | 7 cut(s) | 333, 991, 1092, 1248, 1288, 1339, 1342 |
| BmcAI | AGTACT | 1 cut(s) | 1142 |
| Bme1390I | CCNGG | 3 cut(s) | 110, 328, 744 |
| BmeT110I | CYCGRG | 2 cut(s) | 648, 941 |
| BmgT120I | GGNCC | 2 cut(s) | 157, 746 |
| BmrFI | CCNGG | 3 cut(s) | 110, 328, 744 |
| BmrI | ACTGGG | 1 cut(s) | 1403 |
| BmsI | GCATC | 3 cut(s) | 484, 709, 1041 |
| BmuI | ACTGGG | 1 cut(s) | 1403 |
| BpiI | GAAGAC | 2 cut(s) | 233, 294 |
| BpmI | CTGGAG | 2 cut(s) | 310, 510 |
| Bpu10I | CCTNAGC | 1 cut(s) | 786 |
| BpuEI | CTTGAG | 1 cut(s) | 1115 |
| BpuMI | CCSGG | 1 cut(s) | 110 |
| BsaI | GGTCTC | 1 cut(s) | 1113 |
| BsaJI | CCNNGG | 4 cut(s) | 37, 108, 620, 743 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 554, 584, 1429, 1459 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 109, 743, 744 |
| Bse118I | RCCGGY | 1 cut(s) | 1175 |
| Bse1I | ACTGG | 4 cut(s) | 376, 493, 717, 1409 |
| Bse3DI | GCAATG | 1 cut(s) | 407 |
| BseBI | CCWGG | 2 cut(s) | 328, 744 |
| BseDI | CCNNGG | 4 cut(s) | 37, 108, 620, 743 |
| BseGI | GGATG | 4 cut(s) | 98, 170, 733, 1032 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 109, 743, 744 |
| BseMI | GCAATG | 1 cut(s) | 407 |
| BseMII | CTCAG | 3 cut(s) | 777, 1035, 1347 |
| BseNI | ACTGG | 4 cut(s) | 376, 493, 717, 1409 |
| BseRI | GAGGAG | 1 cut(s) | 1142 |
| BseXI | GCAGC | 7 cut(s) | 343, 976, 1102, 1258, 1273, 1324, 1327 |
| BsgI | GTGCAG | 1 cut(s) | 741 |
| BshFI | GGCC | 2 cut(s) | 158, 748 |
| BsiHKAI | GWGCWC | 1 cut(s) | 260 |
| BsiHKCI | CYCGRG | 2 cut(s) | 648, 941 |
| BsiSI | CCGG | 2 cut(s) | 110, 1176 |
| BslFI | GGGAC | 1 cut(s) | 79 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 109, 743, 744 |
| BsmAI | GTCTC | 2 cut(s) | 38, 1113 |
| BsmFI | GGGAC | 1 cut(s) | 79 |
| BsmI | GAATGC | 1 cut(s) | 777 |
| BsnI | GGCC | 2 cut(s) | 158, 748 |
| Bso31I | GGTCTC | 1 cut(s) | 1113 |
| BsoBI | CYCGRG | 2 cut(s) | 648, 941 |
| Bsp1286I | GDGCHC | 1 cut(s) | 260 |
| Bsp1407I | TGTACA | 2 cut(s) | 95, 284 |
| Bsp143I | GATC | 2 cut(s) | 580, 1152 |
| Bsp19I | CCATGG | 1 cut(s) | 37 |
| BspACI | CCGC | 2 cut(s) | 196, 775 |
| BspANI | GGCC | 2 cut(s) | 158, 748 |
| BspCNI | CTCAG | 3 cut(s) | 778, 1036, 1348 |
| BspHI | TCATGA | 3 cut(s) | 27, 465, 793 |
| BspTNI | GGTCTC | 1 cut(s) | 1113 |
| BsrDI | GCAATG | 1 cut(s) | 407 |
| BsrFI | RCCGGY | 1 cut(s) | 1175 |
| BsrGI | TGTACA | 2 cut(s) | 95, 284 |
| BsrI | ACTGG | 4 cut(s) | 376, 493, 717, 1409 |
| BssAI | RCCGGY | 1 cut(s) | 1175 |
| BssECI | CCNNGG | 4 cut(s) | 37, 108, 620, 743 |
| BssMI | GATC | 2 cut(s) | 580, 1152 |
| BssT1I | CCWWGG | 1 cut(s) | 37 |
| Bst2UI | CCWGG | 2 cut(s) | 328, 744 |
| Bst4CI | ACNGT | 3 cut(s) | 87, 95, 1435 |
| Bst6I | CTCTTC | 2 cut(s) | 1116, 1386 |
| BstAUI | TGTACA | 2 cut(s) | 95, 284 |
| BstC8I | GCNNGC | 3 cut(s) | 927, 1058, 1134 |
| BstDEI | CTNAG | 3 cut(s) | 786, 1044, 1356 |
| BstDSI | CCRYGG | 2 cut(s) | 37, 620 |
| BstF5I | GGATG | 4 cut(s) | 98, 170, 733, 1032 |
| BstHHI | GCGC | 1 cut(s) | 1056 |
| BstKTI | GATC | 2 cut(s) | 583, 1155 |
| BstMAI | GTCTC | 2 cut(s) | 38, 1113 |
| BstMBI | GATC | 2 cut(s) | 580, 1152 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 796, 839, 1090, 1181 |
| BstNI | CCWGG | 2 cut(s) | 328, 744 |
| BstNSI | RCATGY | 3 cut(s) | 684, 1060, 1136 |
| BstSCI | CCNGG | 3 cut(s) | 108, 326, 742 |
| BstSFI | CTRYAG | 1 cut(s) | 1345 |
| BstV1I | GCAGC | 7 cut(s) | 343, 976, 1102, 1258, 1273, 1324, 1327 |
| BstV2I | GAAGAC | 2 cut(s) | 233, 294 |
| BstX2I | RGATCY | 1 cut(s) | 1152 |
| BstYI | RGATCY | 1 cut(s) | 1152 |
| BsuRI | GGCC | 2 cut(s) | 158, 748 |
| BtgI | CCRYGG | 2 cut(s) | 37, 620 |
| BtgZI | GCGATG | 1 cut(s) | 1026 |
| BtsCI | GGATG | 4 cut(s) | 98, 170, 733, 1032 |
| BtsIMutI | CAGTG | 4 cut(s) | 159, 710, 1041, 1322 |
| Cac8I | GCNNGC | 3 cut(s) | 927, 1058, 1134 |
| CciI | TCATGA | 3 cut(s) | 27, 465, 793 |
| CfoI | GCGC | 1 cut(s) | 1056 |
| Cfr10I | RCCGGY | 1 cut(s) | 1175 |
| Cfr13I | GGNCC | 2 cut(s) | 157, 746 |
| CseI | GACGC | 1 cut(s) | 1278 |
| Csp6I | GTAC | 5 cut(s) | 96, 285, 857, 919, 1141 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1185, 1220 |
| CviQI | GTAC | 5 cut(s) | 96, 285, 857, 919, 1141 |
| DdeI | CTNAG | 3 cut(s) | 786, 1044, 1356 |
| DpnI | GATC | 2 cut(s) | 582, 1154 |
| DpnII | GATC | 2 cut(s) | 580, 1152 |
| DraIII | CACNNNGTG | 1 cut(s) | 62 |
| Eam1104I | CTCTTC | 2 cut(s) | 1116, 1386 |
| EarI | CTCTTC | 2 cut(s) | 1116, 1386 |
| Eco130I | CCWWGG | 1 cut(s) | 37 |
| Eco31I | GGTCTC | 1 cut(s) | 1113 |
| Eco57I | CTGAAG | 3 cut(s) | 996, 1097, 1346 |
| Eco88I | CYCGRG | 2 cut(s) | 648, 941 |
| EcoRI | GAATTC | 1 cut(s) | 148 |
| EcoRII | CCWGG | 2 cut(s) | 326, 742 |
| EcoT14I | CCWWGG | 1 cut(s) | 37 |
| ErhI | CCWWGG | 1 cut(s) | 37 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 462, 494 |
| FaqI | GGGAC | 1 cut(s) | 79 |
| FbaI | TGATCA | 1 cut(s) | 580 |
| Fnu4HI | GCNGC | 7 cut(s) | 332, 990, 1091, 1247, 1287, 1338, 1341 |
| FokI | GGATG | 4 cut(s) | 85, 157, 720, 1019 |
| Fsp4HI | GCNGC | 7 cut(s) | 332, 990, 1091, 1247, 1287, 1338, 1341 |
| FspBI | CTAG | 2 cut(s) | 237, 969 |
| FspI | TGCGCA | 1 cut(s) | 1055 |
| GlaI | GCGC | 1 cut(s) | 1055 |
| GluI | GCNGC | 7 cut(s) | 332, 990, 1091, 1247, 1287, 1338, 1341 |
| GsuI | CTGGAG | 2 cut(s) | 310, 510 |
| HaeIII | GGCC | 2 cut(s) | 158, 748 |
| HapII | CCGG | 2 cut(s) | 110, 1176 |
| HgaI | GACGC | 1 cut(s) | 1278 |
| HhaI | GCGC | 1 cut(s) | 1056 |
| Hin6I | GCGC | 1 cut(s) | 1054 |
| HinP1I | GCGC | 1 cut(s) | 1054 |
| HindIII | AAGCTT | 2 cut(s) | 821, 1379 |
| HpaII | CCGG | 2 cut(s) | 110, 1176 |
| HphI | GGTGA | 4 cut(s) | 177, 623, 1296, 1305 |
| Hpy166II | GTNNAC | 1 cut(s) | 780 |
| Hpy188III | TCNNGA | 5 cut(s) | 28, 253, 422, 466, 794 |
| Hpy8I | GTNNAC | 1 cut(s) | 780 |
| HpyAV | CCTTC | 5 cut(s) | 134, 759, 955, 979, 1434 |
| HpyCH4III | ACNGT | 3 cut(s) | 87, 95, 1435 |
| HpyCH4IV | ACGT | 2 cut(s) | 247, 268 |
| HpyCH4V | TGCA | 7 cut(s) | 23, 758, 913, 1060, 1084, 1136, 1184 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 796, 839, 1090, 1181 |
| HpyF3I | CTNAG | 3 cut(s) | 786, 1044, 1356 |
| HpySE526I | ACGT | 2 cut(s) | 247, 268 |
| HspAI | GCGC | 1 cut(s) | 1054 |
| Ksp22I | TGATCA | 1 cut(s) | 580 |
| Kzo9I | GATC | 2 cut(s) | 580, 1152 |
| LmnI | GCTCC | 3 cut(s) | 830, 1029, 1129 |
| Lsp1109I | GCAGC | 7 cut(s) | 343, 976, 1102, 1258, 1273, 1324, 1327 |
| LweI | GCATC | 3 cut(s) | 484, 709, 1041 |
| MaeI | CTAG | 2 cut(s) | 237, 969 |
| MaeII | ACGT | 2 cut(s) | 247, 268 |
| MaeIII | GTNAC | 4 cut(s) | 52, 533, 1320, 1435 |
| MalI | GATC | 2 cut(s) | 582, 1154 |
| MboI | GATC | 2 cut(s) | 580, 1152 |
| MfeI | CAATTG | 1 cut(s) | 557 |
| MflI | RGATCY | 1 cut(s) | 1152 |
| MhlI | GDGCHC | 1 cut(s) | 260 |
| MluCI | AATT | 5 cut(s) | 148, 382, 557, 674, 1222 |
| MlyI | GAGTC | 5 cut(s) | 40, 51, 1229, 1289, 1361 |
| MmeI | TCCRAC | 2 cut(s) | 389, 1317 |
| MroXI | GAANNNNTTC | 1 cut(s) | 473 |
| MseI | TTAA | 5 cut(s) | 416, 480, 816, 884, 1230 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1061 |
| MspA1I | CMGCKG | 1 cut(s) | 1286 |
| MspI | CCGG | 2 cut(s) | 110, 1176 |
| MspR9I | CCNGG | 3 cut(s) | 110, 328, 744 |
| MunI | CAATTG | 1 cut(s) | 557 |
| Mva1269I | GAATGC | 1 cut(s) | 777 |
| MvaI | CCWGG | 2 cut(s) | 328, 744 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 796, 839, 1090, 1181 |
| NciI | CCSGG | 1 cut(s) | 110 |
| NcoI | CCATGG | 1 cut(s) | 37 |
| NdeII | GATC | 2 cut(s) | 580, 1152 |
| NmuCI | GTSAC | 2 cut(s) | 533, 1320 |
| NsbI | TGCGCA | 1 cut(s) | 1055 |
| NspI | RCATGY | 3 cut(s) | 684, 1060, 1136 |
| PaeI | GCATGC | 2 cut(s) | 1060, 1136 |
| PaeR7I | CTCGAG | 1 cut(s) | 648 |
| PagI | TCATGA | 3 cut(s) | 27, 465, 793 |
| PciI | ACATGT | 1 cut(s) | 680 |
| PctI | GAATGC | 1 cut(s) | 777 |
| PdmI | GAANNNNTTC | 1 cut(s) | 473 |
| PfeI | GAWTC | 6 cut(s) | 78, 134, 203, 233, 395, 1310 |
| PkrI | GCNGC | 7 cut(s) | 333, 991, 1092, 1248, 1288, 1339, 1342 |
| PleI | GAGTC | 5 cut(s) | 39, 50, 1229, 1289, 1360 |
| PpsI | GAGTC | 5 cut(s) | 39, 50, 1229, 1289, 1360 |
| PscI | ACATGT | 1 cut(s) | 680 |
| Psp6I | CCWGG | 2 cut(s) | 326, 742 |
| PspGI | CCWGG | 2 cut(s) | 326, 742 |
| PspPI | GGNCC | 2 cut(s) | 157, 746 |
| PspXI | VCTCGAGB | 1 cut(s) | 648 |
| PsuI | RGATCY | 1 cut(s) | 1152 |
| PvuII | CAGCTG | 1 cut(s) | 1286 |
| RsaI | GTAC | 5 cut(s) | 97, 286, 858, 920, 1142 |
| RsaNI | GTAC | 5 cut(s) | 96, 285, 857, 919, 1141 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1061 |
| SaqAI | TTAA | 5 cut(s) | 416, 480, 816, 884, 1230 |
| SatI | GCNGC | 7 cut(s) | 332, 990, 1091, 1247, 1287, 1338, 1341 |
| Sau3AI | GATC | 2 cut(s) | 580, 1152 |
| Sau96I | GGNCC | 2 cut(s) | 157, 746 |
| ScaI | AGTACT | 1 cut(s) | 1142 |
| SchI | GAGTC | 5 cut(s) | 40, 51, 1229, 1289, 1361 |
| ScrFI | CCNGG | 3 cut(s) | 110, 328, 744 |
| SduI | GDGCHC | 1 cut(s) | 260 |
| SfaNI | GCATC | 3 cut(s) | 484, 709, 1041 |
| SfcI | CTRYAG | 1 cut(s) | 1345 |
| Sfr274I | CTCGAG | 1 cut(s) | 648 |
| SlaI | CTCGAG | 1 cut(s) | 648 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1061 |
| SmlI | CTYRAG | 2 cut(s) | 648, 1094 |
| SmoI | CTYRAG | 2 cut(s) | 648, 1094 |
| SphI | GCATGC | 2 cut(s) | 1060, 1136 |
| Sse9I | AATT | 5 cut(s) | 148, 382, 557, 674, 1222 |
| SsiI | CCGC | 2 cut(s) | 196, 775 |
| SspMI | CTAG | 2 cut(s) | 237, 969 |
| StyD4I | CCNGG | 3 cut(s) | 108, 326, 742 |
| StyI | CCWWGG | 1 cut(s) | 37 |
| TaaI | ACNGT | 3 cut(s) | 87, 95, 1435 |
| TaiI | ACGT | 2 cut(s) | 250, 271 |
| TaqI | TCGA | 2 cut(s) | 649, 701 |
| TasI | AATT | 5 cut(s) | 148, 382, 557, 674, 1222 |
| TatI | WGTACW | 5 cut(s) | 95, 284, 856, 918, 1140 |
| TfiI | GAWTC | 6 cut(s) | 78, 134, 203, 233, 395, 1310 |
| Tru1I | TTAA | 5 cut(s) | 416, 480, 816, 884, 1230 |
| Tru9I | TTAA | 5 cut(s) | 416, 480, 816, 884, 1230 |
| TscAI | CASTG | 4 cut(s) | 159, 717, 1048, 1329 |
| TseFI | GTSAC | 2 cut(s) | 533, 1320 |
| TseI | GCWGC | 7 cut(s) | 331, 989, 1090, 1246, 1286, 1337, 1340 |
| Tsp45I | GTSAC | 2 cut(s) | 533, 1320 |
| TspGWI | ACGGA | 1 cut(s) | 617 |
| TspRI | CASTG | 4 cut(s) | 159, 717, 1048, 1329 |
| XapI | RAATTY | 1 cut(s) | 148 |
| XceI | RCATGY | 3 cut(s) | 684, 1060, 1136 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 774 |
| XhoI | CTCGAG | 1 cut(s) | 648 |
| XmnI | GAANNNNTTC | 1 cut(s) | 473 |
| XspI | CTAG | 2 cut(s) | 237, 969 |
| ZrmI | AGTACT | 1 cut(s) | 1142 |