AT3G13110

serine acetyltransferase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
4214399 .. 4216302
1904 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G13110.1

Sequence Viewer

Length: 1176 bp
ATGTTGCCGGTCACAAGTCGCCGCCACTTCACAATGTCCCTATATATGCTCCGTTCATCTTCTCCACACATCAATCATCACTCTTTCCTTCTTCCTTCTTTTGTTTCCTCCAAATTCAAACACCATACTTTATCTCCTCCTCCTTCTCCTCCTCCTCCTCCTCCTATGGCTGCGTGCATCGACACCTGCCGCACTGGTAAACCCCAGATTTCTCCTCGCGATTCTTCTAAACACCACGACGATGAATCTGGCTTTCGTTACATGAACTACTTCCGTTATCCTGATCGATCTTCCTTCAATGGAACCCAGACCAAAACCCTCCATACTCGTCCTTTGCTTGAAGATCTCGATCGCGACGCTGAAGTCGATGATGTTTGGGCCAAAATCCGAGAAGAGGCTAAATCTGATATCGCCAAAGAACCTATTGTTTCCGCTTATTATCACGCTTCGATTGTTTCTCAGCGTTCGTTGGAAGCTGCGTTGGCGAATACTTTATCTGTTAAACTCAGCAATTTGAATCTTCCAAGCAACACGCTTTTCGATTTGTTCTCTGGTGTTCTTCAAGGAAACCCAGATATTGTTGAATCTGTCAAGCTAGATCTTTTAGCTGTTAAGGAGAGAGATCCTGCTTGTATAAGCTACGTTCATTGTTTCCTTCACTTTAAAGGCTTCCTCGCTTGTCAAGCGCATCGTATTGCTCATGAGCTTTGGACTCAGGACAGAAAAATCCTAGCTTTGTTGATCCAGAACAGAGTCTCTGAAGCCTTCGCTGTTGATTTCCACCCTGGAGCTAAAATCGGTACCGGGATTTTGCTAGACCATGCTACGGCTATTGTGATCGGTGAGACGGCGGTTGTGGGGAACAATGTTTCGATTCTCCATAACGTTACGCTTGGAGGAACGGGGAAACAGTGTGGAGATAGGCACCCGAAGATTGGCGATGGGGTTTTGATTGGAGCTGGGACTTGTATTTTGGGGAATATCACGATTGGTGAAGGAGCTAAGATTGGTGCGGGGTCGGTGGTGTTGAAAGACGTGCCGCCGCGTACGACGGCTGTTGGAAATCCGGCGAGGTTGCTTGGTGGTAAAGATAATCCGAAAACGCATGACAAGATTCCTGGTTTGACTATGGACCAGACGTCGCATATATCCGAGTGGTCGGATTATGTAATTTGA

Protein Analysis

391

Amino Acids

42.72

Weight (kDa)

7.73

Isoelectric Point (pI)

37.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SATase_N PF06426 125 - 229 6.8e-36 Serine acetyltransferase, N-terminal
Hexapep PF00132 309 - 343 6.9e-10 Bacterial transferase hexapeptide (six repeats)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012200)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 194
AasI GACNNNNNNGTC 1 cut(s) 362
AatII GACGTC 1 cut(s) 1142
Acc36I ACCTGC 1 cut(s) 194
Acc65I GGTACC 1 cut(s) 800
AccB1I GGYRCC 2 cut(s) 800, 924
AccII CGCG 3 cut(s) 219, 354, 1045
AciI CCGC 7 cut(s) 22, 190, 432, 851, 1013, 1040, 1043
AclI AACGTT 1 cut(s) 885
AclWI GGATC 2 cut(s) 617, 736
AcsI RAATTY 1 cut(s) 113
AcuI CTGAAG 2 cut(s) 381, 780
AcyI GRCGYC 1 cut(s) 1139
AfaI GTAC 2 cut(s) 802, 1048
AfiI CCNNNNNNNGG 3 cut(s) 394, 826, 935
AgsI TTSAA 7 cut(s) 118, 298, 341, 517, 563, 584, 1030
AhdI GACNNNNNGTC 1 cut(s) 1138
AjiI CACGTC 1 cut(s) 1036
AjnI CCWGG 2 cut(s) 784, 1117
AluBI AGCT 9 cut(s) 476, 595, 608, 639, 706, 734, 791, 959, 1001
AluI AGCT 9 cut(s) 476, 595, 608, 639, 706, 734, 791, 959, 1001
Alw26I GTCTC 2 cut(s) 760, 839
AlwI GGATC 2 cut(s) 617, 736
AoxI GGCC 1 cut(s) 378
ApeKI GCWGC 2 cut(s) 170, 476
ApoI RAATTY 1 cut(s) 113
ArsI GACNNNNNNTTYG 2 cut(s) 955, 987
Asp700I GAANNNNTTC 1 cut(s) 269
Asp718I GGTACC 1 cut(s) 800
AspLEI GCGC 1 cut(s) 688
AspS9I GGNCC 2 cut(s) 378, 1132
AsuC2I CCSGG 1 cut(s) 805
AsuHPI GGTGA 2 cut(s) 854, 1004
AvaII GGWCC 1 cut(s) 1132
BanI GGYRCC 2 cut(s) 800, 924
BbvI GCAGC 2 cut(s) 157, 463
BccI CCATC 1 cut(s) 935
BceAI ACGGC 3 cut(s) 843, 864, 1068
BciT130I CCWGG 2 cut(s) 786, 1119
BcnI CCSGG 1 cut(s) 805
BcoDI GTCTC 2 cut(s) 760, 839
BfaI CTAG 3 cut(s) 596, 731, 815
BfuAI ACCTGC 1 cut(s) 194
BglII AGATCT 2 cut(s) 343, 598
BisI GCNGC 6 cut(s) 22, 171, 190, 477, 1040, 1043
BlsI GCNGC 6 cut(s) 23, 172, 191, 478, 1041, 1044
Bme1390I CCNGG 3 cut(s) 786, 805, 1119
Bme18I GGWCC 1 cut(s) 1132
BmeRI GACNNNNNGTC 1 cut(s) 1138
BmgBI CACGTC 1 cut(s) 1036
BmgT120I GGNCC 2 cut(s) 378, 1132
BmiI GGNNCC 3 cut(s) 304, 802, 926
BmrFI CCNGG 3 cut(s) 786, 805, 1119
BmsI GCATC 2 cut(s) 186, 697
BpmI CTGGAG 1 cut(s) 807
BpuMI CCSGG 1 cut(s) 805
Bsa29I ATCGAT 1 cut(s) 286
BsaBI GATNNNNATC 1 cut(s) 348
BsaHI GRCGYC 1 cut(s) 1139
BsaJI CCNNGG 1 cut(s) 784
BsaXI ACNNNNNCTCC 2 cut(s) 118, 148
Bsc4I CCNNNNNNNGG 3 cut(s) 394, 826, 935
Bse118I RCCGGY 1 cut(s) 7
Bse1I ACTGG 1 cut(s) 199
Bse8I GATNNNNATC 1 cut(s) 348
BseBI CCWGG 2 cut(s) 786, 1119
BseCI ATCGAT 1 cut(s) 286
BseDI CCNNGG 1 cut(s) 784
BseJI GATNNNNATC 1 cut(s) 348
BseLI CCNNNNNNNGG 3 cut(s) 394, 826, 935
BseMII CTCAG 3 cut(s) 473, 520, 728
BseNI ACTGG 1 cut(s) 199
BseRI GAGGAG 8 cut(s) 126, 129, 138, 141, 144, 147, 150, 204
BseXI GCAGC 2 cut(s) 157, 463
BseYI CCCAGC 1 cut(s) 959
Bsh1236I CGCG 3 cut(s) 219, 354, 1045
Bsh1285I CGRYCG 1 cut(s) 352
BshFI GGCC 1 cut(s) 380
BshNI GGYRCC 2 cut(s) 800, 924
BshVI ATCGAT 1 cut(s) 286
BsiEI CGRYCG 1 cut(s) 352
BsiSI CCGG 3 cut(s) 8, 804, 1067
BsiWI CGTACG 1 cut(s) 1046
BslFI GGGAC 2 cut(s) 22, 976
BslI CCNNNNNNNGG 3 cut(s) 394, 826, 935
BsmAI GTCTC 2 cut(s) 760, 839
BsmBI CGTCTC 1 cut(s) 839
BsmFI GGGAC 2 cut(s) 22, 976
BsnI GGCC 1 cut(s) 380
Bsp143I GATC 8 cut(s) 283, 287, 343, 349, 598, 622, 741, 837
Bsp68I TCGCGA 2 cut(s) 219, 354
BspACI CCGC 7 cut(s) 22, 190, 432, 851, 1013, 1040, 1043
BspANI GGCC 1 cut(s) 380
BspCNI CTCAG 3 cut(s) 472, 519, 727
BspDI ATCGAT 1 cut(s) 286
BspFNI CGCG 3 cut(s) 219, 354, 1045
BspHI TCATGA 1 cut(s) 700
BspLI GGNNCC 3 cut(s) 304, 802, 926
BspMI ACCTGC 1 cut(s) 194
BspPI GGATC 2 cut(s) 617, 736
BspT107I GGYRCC 2 cut(s) 800, 924
BsrFI RCCGGY 1 cut(s) 7
BsrI ACTGG 1 cut(s) 199
BssAI RCCGGY 1 cut(s) 7
BssECI CCNNGG 1 cut(s) 784
BssMI GATC 8 cut(s) 283, 287, 343, 349, 598, 622, 741, 837
BssNI GRCGYC 1 cut(s) 1139
Bst2UI CCWGG 2 cut(s) 786, 1119
Bst4CI ACNGT 1 cut(s) 912
Bst6I CTCTTC 1 cut(s) 387
BstACI GRCGYC 1 cut(s) 1139
BstC8I GCNNGC 1 cut(s) 175
BstDEI CTNAG 4 cut(s) 459, 506, 714, 1002
BstFNI CGCG 3 cut(s) 219, 354, 1045
BstHHI GCGC 1 cut(s) 688
BstKTI GATC 8 cut(s) 286, 290, 346, 352, 601, 625, 744, 840
BstMAI GTCTC 2 cut(s) 760, 839
BstMBI GATC 8 cut(s) 283, 287, 343, 349, 598, 622, 741, 837
BstMCI CGRYCG 1 cut(s) 352
BstMWI GCNNNNNNNGC 2 cut(s) 482, 683
BstNI CCWGG 2 cut(s) 786, 1119
BstSCI CCNGG 3 cut(s) 784, 803, 1117
BstUI CGCG 3 cut(s) 219, 354, 1045
BstV1I GCAGC 2 cut(s) 157, 463
BstX2I RGATCY 3 cut(s) 343, 598, 622
BstYI RGATCY 3 cut(s) 343, 598, 622
Bsu15I ATCGAT 1 cut(s) 286
BsuRI GGCC 1 cut(s) 380
BsuTUI ATCGAT 1 cut(s) 286
BtgZI GCGATG 1 cut(s) 954
BtrI CACGTC 1 cut(s) 1036
BtsIMutI CAGTG 2 cut(s) 192, 917
BtuMI TCGCGA 2 cut(s) 219, 354
BveI ACCTGC 1 cut(s) 194
Cac8I GCNNGC 1 cut(s) 175
CciI TCATGA 1 cut(s) 700
CfoI GCGC 1 cut(s) 688
Cfr10I RCCGGY 1 cut(s) 7
Cfr13I GGNCC 2 cut(s) 378, 1132
ClaI ATCGAT 1 cut(s) 286
CseI GACGC 1 cut(s) 365
Csp6I GTAC 2 cut(s) 801, 1047
CviAII CATG 4 cut(s) 262, 701, 821, 1106
CviQI GTAC 2 cut(s) 801, 1047
DdeI CTNAG 4 cut(s) 459, 506, 714, 1002
DpnI GATC 8 cut(s) 285, 289, 345, 351, 600, 624, 743, 839
DpnII GATC 8 cut(s) 283, 287, 343, 349, 598, 622, 741, 837
DraI TTTAAA 1 cut(s) 664
DrdI GACNNNNNNGTC 1 cut(s) 362
DriI GACNNNNNGTC 1 cut(s) 1138
DseDI GACNNNNNNGTC 1 cut(s) 362
Eam1104I CTCTTC 1 cut(s) 387
Eam1105I GACNNNNNGTC 1 cut(s) 1138
EarI CTCTTC 1 cut(s) 387
Eco32I GATATC 1 cut(s) 409
Eco47I GGWCC 1 cut(s) 1132
Eco57I CTGAAG 2 cut(s) 381, 780
EcoRII CCWGG 2 cut(s) 784, 1117
EcoRV GATATC 1 cut(s) 409
Esp3I CGTCTC 1 cut(s) 839
FaeI CATG 4 cut(s) 265, 704, 824, 1109
FaqI GGGAC 2 cut(s) 22, 976
FatI CATG 4 cut(s) 261, 700, 820, 1105
FauI CCCGC 1 cut(s) 1006
Fnu4HI GCNGC 6 cut(s) 22, 171, 190, 477, 1040, 1043
Fsp4HI GCNGC 6 cut(s) 22, 171, 190, 477, 1040, 1043
FspBI CTAG 3 cut(s) 596, 731, 815
GlaI GCGC 1 cut(s) 687
GluI GCNGC 6 cut(s) 22, 171, 190, 477, 1040, 1043
GsaI CCCAGC 1 cut(s) 963
GsuI CTGGAG 1 cut(s) 807
HaeIII GGCC 1 cut(s) 380
HapII CCGG 3 cut(s) 8, 804, 1067
HgaI GACGC 1 cut(s) 365
HhaI GCGC 1 cut(s) 688
Hin1I GRCGYC 1 cut(s) 1139
Hin1II CATG 4 cut(s) 265, 704, 824, 1109
Hin6I GCGC 1 cut(s) 686
HinP1I GCGC 1 cut(s) 686
HinfI GANTC 8 cut(s) 221, 245, 517, 584, 712, 753, 874, 1114
HpaII CCGG 3 cut(s) 8, 804, 1067
HphI GGTGA 2 cut(s) 854, 1004
Hpy166II GTNNAC 1 cut(s) 200
Hpy188I TCNGA 6 cut(s) 389, 406, 760, 1098, 1153, 1162
Hpy188III TCNNGA 8 cut(s) 218, 281, 347, 353, 701, 716, 745, 985
Hpy8I GTNNAC 1 cut(s) 200
Hpy99I CGWCG 4 cut(s) 242, 359, 1054, 1144
HpyAV CCTTC 7 cut(s) 98, 105, 153, 304, 665, 775, 989
HpyCH4III ACNGT 1 cut(s) 912
HpyCH4IV ACGT 4 cut(s) 642, 885, 1035, 1139
HpyCH4V TGCA 1 cut(s) 177
HpyF10VI GCNNNNNNNGC 2 cut(s) 482, 683
HpyF3I CTNAG 4 cut(s) 459, 506, 714, 1002
HpySE526I ACGT 4 cut(s) 642, 885, 1035, 1139
Hsp92I GRCGYC 1 cut(s) 1139
Hsp92II CATG 4 cut(s) 265, 704, 824, 1109
HspAI GCGC 1 cut(s) 686
KpnI GGTACC 1 cut(s) 804
Kzo9I GATC 8 cut(s) 283, 287, 343, 349, 598, 622, 741, 837
LmnI GCTCC 4 cut(s) 54, 788, 956, 998
Lsp1109I GCAGC 2 cut(s) 157, 463
LweI GCATC 2 cut(s) 186, 697
MaeI CTAG 3 cut(s) 596, 731, 815
MaeII ACGT 4 cut(s) 642, 885, 1035, 1139
MaeIII GTNAC 3 cut(s) 10, 257, 886
MalI GATC 8 cut(s) 285, 289, 345, 351, 600, 624, 743, 839
MboI GATC 8 cut(s) 283, 287, 343, 349, 598, 622, 741, 837
MboII GAAGA 9 cut(s) 51, 83, 216, 282, 353, 404, 512, 551, 943
MflI RGATCY 3 cut(s) 343, 598, 622
MluCI AATT 3 cut(s) 113, 511, 1170
MlyI GAGTC 2 cut(s) 706, 762
MmeI TCCRAC 3 cut(s) 450, 1039, 1140
MroXI GAANNNNTTC 1 cut(s) 269
MseI TTAA 3 cut(s) 501, 612, 663
MslI CAYNNNNRTG 1 cut(s) 240
MspI CCGG 3 cut(s) 8, 804, 1067
MspR9I CCNGG 3 cut(s) 786, 805, 1119
MvaI CCWGG 2 cut(s) 786, 1119
MvnI CGCG 3 cut(s) 219, 354, 1045
MwoI GCNNNNNNNGC 2 cut(s) 482, 683
NciI CCSGG 1 cut(s) 805
NdeII GATC 8 cut(s) 283, 287, 343, 349, 598, 622, 741, 837
NlaIII CATG 4 cut(s) 265, 704, 824, 1109
NlaIV GGNNCC 3 cut(s) 304, 802, 926
NmuCI GTSAC 1 cut(s) 10
NruI TCGCGA 2 cut(s) 219, 354
PagI TCATGA 1 cut(s) 700
PaqCI CACCTGC 1 cut(s) 194
PcsI WCGNNNNNNNCGW 1 cut(s) 363
PdmI GAANNNNTTC 1 cut(s) 269
PfeI GAWTC 6 cut(s) 221, 245, 517, 584, 874, 1114
Pfl23II CGTACG 1 cut(s) 1046
PkrI GCNGC 6 cut(s) 23, 172, 191, 478, 1041, 1044
Ple19I CGATCG 1 cut(s) 352
PleI GAGTC 2 cut(s) 706, 761
PpsI GAGTC 2 cut(s) 706, 761
Psp1406I AACGTT 1 cut(s) 885
Psp6I CCWGG 2 cut(s) 784, 1117
PspFI CCCAGC 1 cut(s) 959
PspGI CCWGG 2 cut(s) 784, 1117
PspLI CGTACG 1 cut(s) 1046
PspN4I GGNNCC 3 cut(s) 304, 802, 926
PspPI GGNCC 2 cut(s) 378, 1132
PsuI RGATCY 3 cut(s) 343, 598, 622
PvuI CGATCG 1 cut(s) 352
RruI TCGCGA 2 cut(s) 219, 354
RsaI GTAC 2 cut(s) 802, 1048
RsaNI GTAC 2 cut(s) 801, 1047
RseI CAYNNNNRTG 1 cut(s) 240
SaqAI TTAA 3 cut(s) 501, 612, 663
SatI GCNGC 6 cut(s) 22, 171, 190, 477, 1040, 1043
Sau3AI GATC 8 cut(s) 283, 287, 343, 349, 598, 622, 741, 837
Sau96I GGNCC 2 cut(s) 378, 1132
SchI GAGTC 2 cut(s) 706, 762
ScrFI CCNGG 3 cut(s) 786, 805, 1119
SfaNI GCATC 2 cut(s) 186, 697
SinI GGWCC 1 cut(s) 1132
SmiMI CAYNNNNRTG 1 cut(s) 240
Sse9I AATT 3 cut(s) 113, 511, 1170
SsiI CCGC 7 cut(s) 22, 190, 432, 851, 1013, 1040, 1043
SspMI CTAG 3 cut(s) 596, 731, 815
StyD4I CCNGG 3 cut(s) 784, 803, 1117
TaaI ACNGT 1 cut(s) 912
TaiI ACGT 4 cut(s) 645, 888, 1038, 1142
TaqI TCGA 7 cut(s) 180, 286, 348, 366, 449, 540, 872
TasI AATT 3 cut(s) 113, 511, 1170
TauI GCSGC 4 cut(s) 24, 192, 1042, 1045
TfiI GAWTC 6 cut(s) 221, 245, 517, 584, 874, 1114
Tru1I TTAA 3 cut(s) 501, 612, 663
Tru9I TTAA 3 cut(s) 501, 612, 663
TscAI CASTG 2 cut(s) 199, 917
TseFI GTSAC 1 cut(s) 10
TseI GCWGC 2 cut(s) 170, 476
Tsp45I GTSAC 1 cut(s) 10
TspDTI ATGAA 4 cut(s) 45, 258, 278, 635
TspGWI ACGGA 2 cut(s) 41, 263
TspRI CASTG 2 cut(s) 199, 917
VpaK11BI GGWCC 1 cut(s) 1132
XapI RAATTY 1 cut(s) 113
XmnI GAANNNNTTC 1 cut(s) 269
XspI CTAG 3 cut(s) 596, 731, 815
ZraI GACGTC 1 cut(s) 1140
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.