pycom03g13940

Serine acetyltransferase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
Physical Location & Seq
Forward (+)
15108728 .. 15110501
1774 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom03g13940.4

Sequence Viewer

Length: 1515 bp
ATGAAGAAAAAAAAAAAGGAAAAAACAACCGGACATAAGAGTTTTTTTTTTTTTTTTTTTTTAAACAATAAATTTTTTCATATGCATTCAACTCCGACCGCTTTTGAACGGGATAGAAGATTAGATGCATGTTTAGATAGAAGGCCATACACGAAGGAGATCTGTGCTTCCATTGGACCAACCCTCCTCCACCCCGCAATCCCACACTTCCATTTTTCTTTCTTCCTTCATTATCTGGTAATTATTTTCTTCCAACTTTCCCAAAATTTCCATGAAAGTTCCGGTCATAACTCGGTCCTCTCCCCTCACTTCTCTATCCTCTCAAATTCTCAAGCCCCCTCGACTCCCATGGCTGCCTGCATCCACACTCAAAGCCACCCACTTTGTTGGGATTCAAACAGGTCCACATCCGACGAAGACGGCTACCATTTCATGAAGTTCTGCCGCCGCAGTTTCTCTGATCAGGTTTCCTGCGCACCCATTTCCCAGAATCGCACGAAAACAACTCAGACGCGCAGAATCGTGGAGGATCTCGGCCCCGATGAAGATCTATGGCTCAGAATGCAGGATGAAGCTCGCTCGGATATAGATGAAGAACCCACCTTGTCAGATTACTATTACACTTCGATTCTGTCGCATCCTTCTCTGGAAAGTGCTTTAGCCCACCATCTGTCTGTGAAATTAAGCAATCCTAGCCTCTCCTGTGCGACCCTAGTGGATATTTTCATGGGGGTGTTCGCACAGGATCAGGAAGAGCGGGACCCGGCGTGCGTGAGTTACACGCACTGCCTCTTGAATTTCAAGGGATTTCTTGCGTGCCAAGCCCACCGGGCGGCGCACAAATTGTGGTTGCAGGGGAGGAAGGTCCTGGCTTTGCTGATTCAGAACAGGGTGTCCGAAATTTTCGCGGTGGACATTCACCCGGGAGCGAAAATCGGAAGCGGGATACTGCTGGACCACGCCACCGGGCTCGTGGTGGGAGAGACGGCGGTGATTGGGAACAATGTGTCAATTTTGCACAGTGTGACTTTGGGAGGGACCGGAAAGGCATCTGGGGACCGGCACCCCAAAATTGGGGATGGGGTGCTGATTGGGGCAGGGACCTGTATATTGGGGAACATTAGGATTGGGGAAGGGGCAAAGATTGGGGCTGGGTCTGTGGTGATAAAGGAAGTGCCGGCGAGGACAACGGTGGTTGGGAATCCGGCCAAGTTGCTTGGAGGGAAAAATCCAGTTAAGTTGGACAAGATGCCTAGTTTTACTATGGACCATACTTCCAATATAGCTGAGTGGTATGATTACTTAGAGGCCCGTTTGGATCTTTTGAAAAATTTTAGTTGTTTTTTTGGGGATTTTTTCTGCTTAGCCTCCTGCCTCGATGCAGATTATGTAACATGTAATGGGGTTTGTATTCTTTCTCAGAATTGGTGTTTCAGTATTATTGTGTGTACTGTTTTGTACTATTGTAAGATGTTAAGATTATTGTTTGTTTTGAATGTCAAAGTTCGGGGTTAG

Protein Analysis

505

Amino Acids

56.18

Weight (kDa)

8.04

Isoelectric Point (pI)

42.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0012200)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 475
AccB1I GGYRCC 1 cut(s) 1062
AccBSI CCGCTC 1 cut(s) 757
AccII CGCG 2 cut(s) 514, 908
AciI CCGC 9 cut(s) 99, 195, 445, 448, 757, 833, 908, 942, 989
AclWI GGATC 3 cut(s) 537, 753, 1326
AcoI YGGCCR 1 cut(s) 1206
AcsI RAATTY 6 cut(s) 71, 265, 325, 796, 900, 1330
AdeI CACNNNGTG 1 cut(s) 1024
AfaI GTAC 2 cut(s) 1450, 1460
AfiI CCNNNNNNNGG 3 cut(s) 832, 1073, 1074
AflIII ACRYGT 1 cut(s) 1394
AgsI TTSAA 7 cut(s) 90, 107, 396, 796, 802, 1327, 1495
AjnI CCWGG 1 cut(s) 867
AloI GAACNNNNNNTCC 2 cut(s) 878, 910
AluBI AGCT 2 cut(s) 575, 1286
AluI AGCT 2 cut(s) 575, 1286
Alw26I GTCTC 1 cut(s) 977
AlwI GGATC 3 cut(s) 537, 753, 1326
Ama87I CYCGRG 1 cut(s) 922
AoxI GGCC 4 cut(s) 143, 535, 1206, 1308
ApeKI GCWGC 1 cut(s) 353
ApoI RAATTY 6 cut(s) 71, 265, 325, 796, 900, 1330
AspLEI GCGC 3 cut(s) 476, 516, 838
AsuC2I CCSGG 5 cut(s) 764, 830, 923, 924, 967
AsuHPI GGTGA 3 cut(s) 911, 1003, 1174
AvaI CYCGRG 1 cut(s) 922
BanI GGYRCC 1 cut(s) 1062
BanII GRGCYC 1 cut(s) 972
BauI CACGAG 1 cut(s) 971
BbsI GAAGAC 1 cut(s) 423
BbvI GCAGC 1 cut(s) 340
BccI CCATC 2 cut(s) 675, 1073
BceAI ACGGC 2 cut(s) 436, 1002
BciT130I CCWGG 1 cut(s) 869
BciVI GTATCC 1 cut(s) 939
BclI TGATCA 1 cut(s) 460
BcnI CCSGG 5 cut(s) 764, 830, 923, 924, 967
BcoDI GTCTC 1 cut(s) 977
BfaI CTAG 3 cut(s) 693, 713, 1254
BfuI GTATCC 1 cut(s) 939
BglI GCCNNNNNGGC 1 cut(s) 830
BglII AGATCT 2 cut(s) 159, 547
BisI GCNGC 4 cut(s) 354, 445, 448, 834
BlpI GCTNAGC 1 cut(s) 1363
BlsI GCNGC 4 cut(s) 355, 446, 449, 835
Bme1390I CCNGG 6 cut(s) 764, 830, 869, 923, 924, 967
BmeT110I CYCGRG 1 cut(s) 922
BmiI GGNNCC 7 cut(s) 538, 761, 762, 1039, 1058, 1064, 1102
BmrFI CCNGG 6 cut(s) 764, 830, 869, 923, 924, 967
BmsI GCATC 6 cut(s) 115, 369, 646, 1058, 1239, 1369
BpiI GAAGAC 1 cut(s) 423
Bpu1102I GCTNAGC 1 cut(s) 1363
BpuEI CTTGAG 1 cut(s) 315
BpuMI CCSGG 5 cut(s) 764, 830, 923, 924, 967
BsaBI GATNNNNATC 1 cut(s) 546
BsaJI CCNNGG 2 cut(s) 348, 922
BsaWI WCCGGW 3 cut(s) 29, 281, 1040
BsaXI ACNNNNNCTCC 2 cut(s) 168, 198
Bsc4I CCNNNNNNNGG 3 cut(s) 832, 1073, 1074
Bse118I RCCGGY 2 cut(s) 1059, 1177
Bse1I ACTGG 1 cut(s) 1232
Bse8I GATNNNNATC 1 cut(s) 546
BseBI CCWGG 1 cut(s) 869
BseDI CCNNGG 2 cut(s) 348, 922
BseGI GGATG 5 cut(s) 360, 407, 574, 637, 1084
BseJI GATNNNNATC 1 cut(s) 546
BseLI CCNNNNNNNGG 3 cut(s) 832, 1073, 1074
BseMII CTCAG 4 cut(s) 521, 571, 1278, 1433
BseNI ACTGG 1 cut(s) 1232
BseRI GAGGAG 1 cut(s) 176
BseXI GCAGC 1 cut(s) 340
BseYI CCCAGC 1 cut(s) 1151
Bsh1236I CGCG 2 cut(s) 514, 908
Bsh1285I CGRYCG 1 cut(s) 99
BshFI GGCC 4 cut(s) 145, 537, 1208, 1310
BshNI GGYRCC 1 cut(s) 1062
BsiEI CGRYCG 1 cut(s) 99
BsiHKCI CYCGRG 1 cut(s) 922
BslFI GGGAC 4 cut(s) 773, 1051, 1070, 1114
BslI CCNNNNNNNGG 3 cut(s) 832, 1073, 1074
BsmAI GTCTC 1 cut(s) 977
BsmBI CGTCTC 1 cut(s) 977
BsmFI GGGAC 4 cut(s) 773, 1051, 1070, 1114
BsmI GAATGC 2 cut(s) 85, 567
BsnI GGCC 4 cut(s) 145, 537, 1208, 1310
BsoBI CYCGRG 1 cut(s) 922
Bsp1286I GDGCHC 1 cut(s) 972
Bsp143I GATC 6 cut(s) 159, 460, 529, 547, 745, 1318
Bsp1720I GCTNAGC 1 cut(s) 1363
Bsp19I CCATGG 1 cut(s) 348
BspACI CCGC 9 cut(s) 99, 195, 445, 448, 757, 833, 908, 942, 989
BspANI GGCC 4 cut(s) 145, 537, 1208, 1310
BspCNI CTCAG 4 cut(s) 520, 570, 1279, 1432
BspFNI CGCG 2 cut(s) 514, 908
BspHI TCATGA 1 cut(s) 432
BspLI GGNNCC 7 cut(s) 538, 761, 762, 1039, 1058, 1064, 1102
BspPI GGATC 3 cut(s) 537, 753, 1326
BspQI GCTCTTC 1 cut(s) 747
BspT107I GGYRCC 1 cut(s) 1062
BsrBI CCGCTC 1 cut(s) 757
BsrFI RCCGGY 2 cut(s) 1059, 1177
BsrI ACTGG 1 cut(s) 1232
BssAI RCCGGY 2 cut(s) 1059, 1177
BssECI CCNNGG 2 cut(s) 348, 922
BssMI GATC 6 cut(s) 159, 460, 529, 547, 745, 1318
BssSI CACGAG 1 cut(s) 971
BssT1I CCWWGG 1 cut(s) 348
Bst2BI CACGAG 1 cut(s) 971
Bst2UI CCWGG 1 cut(s) 869
Bst4CI ACNGT 3 cut(s) 1022, 1192, 1453
Bst6I CTCTTC 1 cut(s) 747
BstC8I GCNNGC 5 cut(s) 358, 577, 769, 817, 1179
BstDEI CTNAG 6 cut(s) 507, 557, 1287, 1303, 1363, 1419
BstDSI CCRYGG 1 cut(s) 348
BstF5I GGATG 5 cut(s) 360, 407, 574, 637, 1084
BstFNI CGCG 2 cut(s) 514, 908
BstHHI GCGC 3 cut(s) 476, 516, 838
BstKTI GATC 6 cut(s) 162, 463, 532, 550, 748, 1321
BstMAI GTCTC 1 cut(s) 977
BstMBI GATC 6 cut(s) 159, 460, 529, 547, 745, 1318
BstMCI CGRYCG 1 cut(s) 99
BstMWI GCNNNNNNNGC 4 cut(s) 562, 693, 821, 830
BstNI CCWGG 1 cut(s) 869
BstNSI RCATGY 2 cut(s) 132, 1398
BstSCI CCNGG 6 cut(s) 762, 828, 867, 921, 922, 965
BstUI CGCG 2 cut(s) 514, 908
BstV1I GCAGC 1 cut(s) 340
BstV2I GAAGAC 1 cut(s) 423
BstX2I RGATCY 4 cut(s) 159, 529, 547, 1318
BstXI CCANNNNNNTGG 1 cut(s) 387
BstYI RGATCY 4 cut(s) 159, 529, 547, 1318
BsuI GTATCC 1 cut(s) 939
BsuRI GGCC 4 cut(s) 145, 537, 1208, 1310
BtgI CCRYGG 1 cut(s) 348
BtsCI GGATG 5 cut(s) 360, 407, 574, 637, 1084
BtsI GCAGTG 1 cut(s) 784
BtsIMutI CAGTG 2 cut(s) 784, 1027
Cac8I GCNNGC 5 cut(s) 358, 577, 769, 817, 1179
CciI TCATGA 1 cut(s) 432
CfoI GCGC 3 cut(s) 476, 516, 838
Cfr10I RCCGGY 2 cut(s) 1059, 1177
Cfr9I CCCGGG 1 cut(s) 922
CseI GACGC 1 cut(s) 520
Csp6I GTAC 2 cut(s) 1449, 1459
CspCI CAANNNNNGTGG 2 cut(s) 365, 400
CviAII CATG 6 cut(s) 129, 272, 349, 433, 727, 1395
CviQI GTAC 2 cut(s) 1449, 1459
DdeI CTNAG 6 cut(s) 507, 557, 1287, 1303, 1363, 1419
DpnI GATC 6 cut(s) 161, 462, 531, 549, 747, 1320
DpnII GATC 6 cut(s) 159, 460, 529, 547, 745, 1318
DraI TTTAAA 1 cut(s) 63
DraIII CACNNNGTG 1 cut(s) 1024
EaeI YGGCCR 1 cut(s) 1206
Eam1104I CTCTTC 1 cut(s) 747
EarI CTCTTC 1 cut(s) 747
Eco130I CCWWGG 1 cut(s) 348
Eco24I GRGCYC 1 cut(s) 972
Eco88I CYCGRG 1 cut(s) 922
EcoO109I RGGNCCY 3 cut(s) 760, 865, 1101
EcoRII CCWGG 1 cut(s) 867
EcoT14I CCWWGG 1 cut(s) 348
EcoT22I ATGCAT 2 cut(s) 87, 130
EcoT38I GRGCYC 1 cut(s) 972
ErhI CCWWGG 1 cut(s) 348
Esp3I CGTCTC 1 cut(s) 977
FaeI CATG 6 cut(s) 132, 275, 352, 436, 730, 1398
FaqI GGGAC 4 cut(s) 773, 1051, 1070, 1114
FatI CATG 6 cut(s) 128, 271, 348, 432, 726, 1394
FauI CCCGC 3 cut(s) 202, 750, 935
FauNDI CATATG 1 cut(s) 81
FbaI TGATCA 1 cut(s) 460
Fnu4HI GCNGC 4 cut(s) 354, 445, 448, 834
FokI GGATG 5 cut(s) 347, 394, 581, 624, 1091
FriOI GRGCYC 1 cut(s) 972
Fsp4HI GCNGC 4 cut(s) 354, 445, 448, 834
FspBI CTAG 3 cut(s) 693, 713, 1254
FspI TGCGCA 1 cut(s) 475
GlaI GCGC 3 cut(s) 475, 515, 837
GluI GCNGC 4 cut(s) 354, 445, 448, 834
GsaI CCCAGC 1 cut(s) 1155
HaeIII GGCC 4 cut(s) 145, 537, 1208, 1310
HgaI GACGC 1 cut(s) 520
HhaI GCGC 3 cut(s) 476, 516, 838
Hin1II CATG 6 cut(s) 132, 275, 352, 436, 730, 1398
Hin6I GCGC 3 cut(s) 474, 514, 836
HinP1I GCGC 3 cut(s) 474, 514, 836
HinfI GANTC 7 cut(s) 343, 392, 490, 519, 628, 880, 1201
HphI GGTGA 3 cut(s) 911, 1003, 1174
Hpy166II GTNNAC 3 cut(s) 405, 913, 1449
Hpy188III TCNNGA 4 cut(s) 433, 647, 749, 793
Hpy8I GTNNAC 3 cut(s) 405, 913, 1449
Hpy99I CGWCG 1 cut(s) 416
HpyAV CCTTC 6 cut(s) 135, 148, 236, 651, 856, 1127
HpyCH4III ACNGT 3 cut(s) 1022, 1192, 1453
HpyCH4V TGCA 7 cut(s) 85, 128, 360, 565, 853, 1018, 1382
HpyF10VI GCNNNNNNNGC 4 cut(s) 562, 693, 821, 830
HpyF3I CTNAG 6 cut(s) 507, 557, 1287, 1303, 1363, 1419
Hsp92II CATG 6 cut(s) 132, 275, 352, 436, 730, 1398
HspAI GCGC 3 cut(s) 474, 514, 836
KflI GGGWCCC 1 cut(s) 760
KroI GCCGGC 1 cut(s) 1177
KroNI GCCGGC 1 cut(s) 1179
Ksp22I TGATCA 1 cut(s) 460
Kzo9I GATC 6 cut(s) 159, 460, 529, 547, 745, 1318
LguI GCTCTTC 1 cut(s) 747
LmnI GCTCC 1 cut(s) 926
Lsp1109I GCAGC 1 cut(s) 340
LweI GCATC 6 cut(s) 115, 369, 646, 1058, 1239, 1369
MaeI CTAG 3 cut(s) 693, 713, 1254
MaeIII GTNAC 3 cut(s) 776, 1024, 1390
MalI GATC 6 cut(s) 161, 462, 531, 549, 747, 1320
MbiI CCGCTC 1 cut(s) 757
MboI GATC 6 cut(s) 159, 460, 529, 547, 745, 1318
MboII GAAGA 8 cut(s) 16, 129, 214, 241, 428, 557, 605, 764
MflI RGATCY 4 cut(s) 159, 529, 547, 1318
MhlI GDGCHC 1 cut(s) 972
MlyI GAGTC 1 cut(s) 337
MmeI TCCRAC 4 cut(s) 119, 277, 435, 1221
Mph1103I ATGCAT 2 cut(s) 87, 130
MroNI GCCGGC 1 cut(s) 1177
MseI TTAA 4 cut(s) 62, 683, 1236, 1475
MslI CAYNNNNRTG 1 cut(s) 731
MspR9I CCNGG 6 cut(s) 764, 830, 869, 923, 924, 967
Mva1269I GAATGC 2 cut(s) 85, 567
MvaI CCWGG 1 cut(s) 869
MvnI CGCG 2 cut(s) 514, 908
MwoI GCNNNNNNNGC 4 cut(s) 562, 693, 821, 830
NaeI GCCGGC 1 cut(s) 1179
NciI CCSGG 5 cut(s) 764, 830, 923, 924, 967
NcoI CCATGG 1 cut(s) 348
NdeI CATATG 1 cut(s) 81
NdeII GATC 6 cut(s) 159, 460, 529, 547, 745, 1318
NgoMIV GCCGGC 1 cut(s) 1177
NlaIII CATG 6 cut(s) 132, 275, 352, 436, 730, 1398
NlaIV GGNNCC 7 cut(s) 538, 761, 762, 1039, 1058, 1064, 1102
NmeAIII GCCGAG 1 cut(s) 513
NmuCI GTSAC 1 cut(s) 1024
NsbI TGCGCA 1 cut(s) 475
NsiI ATGCAT 2 cut(s) 87, 130
NspI RCATGY 2 cut(s) 132, 1398
PagI TCATGA 1 cut(s) 432
PciI ACATGT 1 cut(s) 1394
PciSI GCTCTTC 1 cut(s) 747
PctI GAATGC 2 cut(s) 85, 567
PdiI GCCGGC 1 cut(s) 1179
PfeI GAWTC 6 cut(s) 392, 490, 519, 628, 880, 1201
PkrI GCNGC 4 cut(s) 355, 446, 449, 835
PleI GAGTC 1 cut(s) 337
PpsI GAGTC 1 cut(s) 337
PpuMI RGGWCCY 3 cut(s) 760, 865, 1101
PscI ACATGT 1 cut(s) 1394
Psp5II RGGWCCY 3 cut(s) 760, 865, 1101
Psp6I CCWGG 1 cut(s) 867
PspFI CCCAGC 1 cut(s) 1151
PspGI CCWGG 1 cut(s) 867
PspN4I GGNNCC 7 cut(s) 538, 761, 762, 1039, 1058, 1064, 1102
PspPPI RGGWCCY 3 cut(s) 760, 865, 1101
PsuI RGATCY 4 cut(s) 159, 529, 547, 1318
RsaI GTAC 2 cut(s) 1450, 1460
RsaNI GTAC 2 cut(s) 1449, 1459
RseI CAYNNNNRTG 1 cut(s) 731
SapI GCTCTTC 1 cut(s) 747
SaqAI TTAA 4 cut(s) 62, 683, 1236, 1475
SatI GCNGC 4 cut(s) 354, 445, 448, 834
Sau3AI GATC 6 cut(s) 159, 460, 529, 547, 745, 1318
SchI GAGTC 1 cut(s) 337
ScrFI CCNGG 6 cut(s) 764, 830, 869, 923, 924, 967
SduI GDGCHC 1 cut(s) 972
SetI ASST 7 cut(s) 404, 468, 577, 605, 867, 1106, 1288
SfaNI GCATC 6 cut(s) 115, 369, 646, 1058, 1239, 1369
SmaI CCCGGG 1 cut(s) 924
SmiMI CAYNNNNRTG 1 cut(s) 731
SmlI CTYRAG 1 cut(s) 330
SmoI CTYRAG 1 cut(s) 330
SsiI CCGC 9 cut(s) 99, 195, 445, 448, 757, 833, 908, 942, 989
SspMI CTAG 3 cut(s) 693, 713, 1254
StyD4I CCNGG 6 cut(s) 762, 828, 867, 921, 922, 965
StyI CCWWGG 1 cut(s) 348
TaaI ACNGT 3 cut(s) 1022, 1192, 1453
TaqI TCGA 3 cut(s) 341, 626, 1377
TaqII GACCGA 1 cut(s) 283
TatI WGTACW 2 cut(s) 1448, 1458
TauI GCSGC 3 cut(s) 447, 450, 836
TfiI GAWTC 6 cut(s) 392, 490, 519, 628, 880, 1201
Tru1I TTAA 4 cut(s) 62, 683, 1236, 1475
Tru9I TTAA 4 cut(s) 62, 683, 1236, 1475
TscAI CASTG 2 cut(s) 791, 1027
TseFI GTSAC 1 cut(s) 1024
TseI GCWGC 1 cut(s) 353
Tsp45I GTSAC 1 cut(s) 1024
TspMI CCCGGG 1 cut(s) 922
TspRI CASTG 2 cut(s) 791, 1027
XapI RAATTY 6 cut(s) 71, 265, 325, 796, 900, 1330
XceI RCATGY 2 cut(s) 132, 1398
XcmI CCANNNNNNNNNTGG 1 cut(s) 970
XmaI CCCGGG 1 cut(s) 922
XspI CTAG 3 cut(s) 693, 713, 1254
Zsp2I ATGCAT 2 cut(s) 87, 130
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.