AT3G14960

Belongs to the glycosyltransferase 31 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0009248
Physical Location & Seq
Reverse (-)
5035841 .. 5038114
2274 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G14960.1

Sequence Viewer

Length: 1032 bp
ATGTCATCTTCTCCCAAGCTGTTTCACGCGCGTCCATCATTCTTCACGCGCCGATCGACGCCTTTGATCGTCTTCACCTCTCTCGCTATCGGTCTAACCGGTTTCCTTTTCGGATTATCAACGATCCTTTTCCCTGGTCTCCGGTTATCTGGCCGGTCCTGCCTCACCAACTTGCCACCGAAGACTGTTAAAATCGTCTGGGACGTCGCTGGTAATAGTATCGTTAATGGCGAAGTCAAGAGGCACAAAGTGATGGGATTCGTCGGAATCCAGACCGGATTCAGATCTGCTGGCCGGAGACGAGCTCTCAGGAACACATGGATGCCGTCCGATCCCGAAGGCCTTCGAAGATTGGAAGAATCAACAGGATTAGCCATTAGATTTATTATAGGCAAAACCAAAGACGAGGCCAAAATGGTTGAGCTGAGAAGCGAAGTTGCAATGTACGATGACTTTATACTGCTCGATATCGAGGAGGAGTACAGTAAGCTCCCCTACAAAACTTTGGCTTTCTTCAAAGCTGCATATGCACTATATGATTCAGAATTCTATGTCAAAGCTGATGATGATATATACTTGAGGCCAGATCGTTTGTCTTTACTGTTGGCTAAAGAGCGGGGTCACTCGCAGACATACCTTGGATGCATGAAAAAAGGTCCGGTTTTCACAGATCCAAAGCTTAAATGGTATGAACCTTTGGCAGATCTGCTCGGGAAAGAGTACTTTCTTCATGCTTATGGCCCCATATATGCTCTTTCTGCTGATGTTGTCACTAGTTTGGTTGCCCTCAAGAACAACAGTTTCAGGATGTTTAGCAATGAGGACGTGACCATAGGTGCGTGGATGCTGGCAATGAACGTTAACCACGAGAACCTTCACACCCTTTGTGAACCAGAGTGCTCACCATACTCCATTGCTGTTTGGGATATACCAAAATGCTCAGGCCTCTGTAACCCAGAGAAAAGGATGTTGGAACTTCACATGCTAGAGAGCTGCTCAAAAAGCCCGACTTTGCCATCGGATGATGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0012505 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Galactosyl_T

Protein Analysis

343

Amino Acids

38.72

Weight (kDa)

8.07

Isoelectric Point (pI)

54.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Galactosyl_T PF01762 99 - 292 4.9e-48 Galactosyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 207
AccBSI CCGCTC 1 cut(s) 616
AccII CGCG 3 cut(s) 29, 31, 49
AciI CCGC 1 cut(s) 616
AclI AACGTT 1 cut(s) 858
AclWI GGATC 3 cut(s) 118, 326, 665
AcoI YGGCCR 2 cut(s) 151, 292
AcsI RAATTY 1 cut(s) 545
AcyI GRCGYC 2 cut(s) 59, 204
AdeI CACNNNGTG 1 cut(s) 250
AfaI GTAC 3 cut(s) 446, 482, 722
AgeI ACCGGT 1 cut(s) 98
AgsI TTSAA 1 cut(s) 517
AhlI ACTAGT 1 cut(s) 773
AjiI CACGTC 1 cut(s) 826
AjnI CCWGG 1 cut(s) 133
AjuI GAANNNNNNNTTGG 2 cut(s) 953, 985
AluBI AGCT 8 cut(s) 19, 305, 424, 490, 521, 560, 679, 993
AluI AGCT 8 cut(s) 19, 305, 424, 490, 521, 560, 679, 993
Alw21I GWGCWC 2 cut(s) 307, 902
Alw26I GTCTC 2 cut(s) 143, 292
AlwI GGATC 3 cut(s) 118, 326, 665
Ama87I CYCGRG 1 cut(s) 710
AoxI GGCC 7 cut(s) 151, 292, 340, 408, 581, 739, 943
ApeKI GCWGC 2 cut(s) 521, 993
ApoI RAATTY 1 cut(s) 545
AsiGI ACCGGT 1 cut(s) 98
Asp700I GAANNNNTTC 1 cut(s) 342
AspLEI GCGC 2 cut(s) 31, 51
AspS9I GGNCC 3 cut(s) 156, 656, 740
AsuHPI GGTGA 3 cut(s) 67, 157, 894
AsuII TTCGAA 1 cut(s) 346
AvaI CYCGRG 1 cut(s) 710
AvaII GGWCC 2 cut(s) 156, 656
BanII GRGCYC 1 cut(s) 307
BauI CACGAG 1 cut(s) 866
BbsI GAAGAC 2 cut(s) 64, 188
Bbv12I GWGCWC 2 cut(s) 307, 902
BbvI GCAGC 2 cut(s) 508, 980
BccI CCATC 3 cut(s) 43, 247, 1024
BceAI ACGGC 1 cut(s) 310
BciT130I CCWGG 1 cut(s) 135
BcoDI GTCTC 2 cut(s) 143, 292
BcuI ACTAGT 1 cut(s) 773
BfaI CTAG 2 cut(s) 774, 986
BglII AGATCT 2 cut(s) 284, 703
BisI GCNGC 2 cut(s) 522, 994
BlsI GCNGC 2 cut(s) 523, 995
BmcAI AGTACT 1 cut(s) 722
Bme1390I CCNGG 1 cut(s) 135
Bme18I GGWCC 2 cut(s) 156, 656
BmeT110I CYCGRG 1 cut(s) 710
BmgBI CACGTC 1 cut(s) 826
BmgT120I GGNCC 3 cut(s) 156, 656, 740
BmiI GGNNCC 1 cut(s) 742
BmrFI CCNGG 1 cut(s) 135
BmsI GCATC 3 cut(s) 312, 632, 834
BpiI GAAGAC 2 cut(s) 64, 188
BplI GAGNNNNNCTC 4 cut(s) 289, 321, 980, 1012
Bpu10I CCTNAGC 1 cut(s) 940
Bpu14I TTCGAA 1 cut(s) 346
BpuEI CTTGAG 2 cut(s) 598, 773
BsaBI GATNNNNATC 1 cut(s) 283
BsaHI GRCGYC 2 cut(s) 59, 204
BsaI GGTCTC 1 cut(s) 143
BsaJI CCNNGG 2 cut(s) 133, 637
BsaWI WCCGGW 4 cut(s) 98, 141, 275, 658
Bse118I RCCGGY 2 cut(s) 98, 153
Bse3DI GCAATG 4 cut(s) 447, 823, 858, 912
Bse8I GATNNNNATC 1 cut(s) 283
BseBI CCWGG 1 cut(s) 135
BseDI CCNNGG 2 cut(s) 133, 637
BseGI GGATG 6 cut(s) 327, 647, 813, 849, 972, 1027
BseJI GATNNNNATC 1 cut(s) 283
BseMI GCAATG 4 cut(s) 447, 823, 858, 912
BseMII CTCAG 3 cut(s) 322, 416, 954
BseRI GAGGAG 2 cut(s) 488, 491
BseXI GCAGC 2 cut(s) 508, 980
Bsh1236I CGCG 3 cut(s) 29, 31, 49
Bsh1285I CGRYCG 1 cut(s) 56
BshFI GGCC 7 cut(s) 153, 294, 342, 410, 583, 741, 945
BshTI ACCGGT 1 cut(s) 98
BsiEI CGRYCG 1 cut(s) 56
BsiHKAI GWGCWC 2 cut(s) 307, 902
BsiHKCI CYCGRG 1 cut(s) 710
BsiSI CCGG 6 cut(s) 99, 142, 154, 276, 295, 659
BslFI GGGAC 1 cut(s) 215
BsmAI GTCTC 2 cut(s) 143, 292
BsmBI CGTCTC 1 cut(s) 292
BsmFI GGGAC 1 cut(s) 215
BsnI GGCC 7 cut(s) 153, 294, 342, 410, 583, 741, 945
Bso31I GGTCTC 1 cut(s) 143
BsoBI CYCGRG 1 cut(s) 710
Bsp119I TTCGAA 1 cut(s) 346
Bsp1286I GDGCHC 2 cut(s) 307, 902
Bsp143I GATC 8 cut(s) 53, 66, 123, 284, 331, 586, 670, 703
BspACI CCGC 1 cut(s) 616
BspANI GGCC 7 cut(s) 153, 294, 342, 410, 583, 741, 945
BspCNI CTCAG 3 cut(s) 321, 417, 953
BspFNI CGCG 3 cut(s) 29, 31, 49
BspLI GGNNCC 1 cut(s) 742
BspPI GGATC 3 cut(s) 118, 326, 665
BspT104I TTCGAA 1 cut(s) 346
BspTNI GGTCTC 1 cut(s) 143
BsrBI CCGCTC 1 cut(s) 616
BsrDI GCAATG 4 cut(s) 447, 823, 858, 912
BsrFI RCCGGY 2 cut(s) 98, 153
BssAI RCCGGY 2 cut(s) 98, 153
BssECI CCNNGG 2 cut(s) 133, 637
BssMI GATC 8 cut(s) 53, 66, 123, 284, 331, 586, 670, 703
BssNI GRCGYC 2 cut(s) 59, 204
BssSI CACGAG 1 cut(s) 866
BssT1I CCWWGG 1 cut(s) 637
Bst2BI CACGAG 1 cut(s) 866
Bst2UI CCWGG 1 cut(s) 135
Bst4CI ACNGT 4 cut(s) 187, 485, 603, 800
BstACI GRCGYC 2 cut(s) 59, 204
BstBI TTCGAA 1 cut(s) 346
BstC8I GCNNGC 2 cut(s) 292, 849
BstDEI CTNAG 3 cut(s) 308, 425, 940
BstF5I GGATG 6 cut(s) 327, 647, 813, 849, 972, 1027
BstFNI CGCG 3 cut(s) 29, 31, 49
BstHHI GCGC 2 cut(s) 31, 51
BstKTI GATC 8 cut(s) 56, 69, 126, 287, 334, 589, 673, 706
BstMAI GTCTC 2 cut(s) 143, 292
BstMBI GATC 8 cut(s) 53, 66, 123, 284, 331, 586, 670, 703
BstMCI CGRYCG 1 cut(s) 56
BstMWI GCNNNNNNNGC 4 cut(s) 159, 527, 758, 1002
BstNI CCWGG 1 cut(s) 135
BstNSI RCATGY 1 cut(s) 985
BstSCI CCNGG 1 cut(s) 133
BstUI CGCG 3 cut(s) 29, 31, 49
BstV1I GCAGC 2 cut(s) 508, 980
BstV2I GAAGAC 2 cut(s) 64, 188
BstX2I RGATCY 3 cut(s) 284, 670, 703
BstYI RGATCY 3 cut(s) 284, 670, 703
BsuRI GGCC 7 cut(s) 153, 294, 342, 410, 583, 741, 945
BtrI CACGTC 1 cut(s) 826
BtsCI GGATG 6 cut(s) 327, 647, 813, 849, 972, 1027
Cac8I GCNNGC 2 cut(s) 292, 849
CfoI GCGC 2 cut(s) 31, 51
Cfr10I RCCGGY 2 cut(s) 98, 153
Cfr13I GGNCC 3 cut(s) 156, 656, 740
CseI GACGC 2 cut(s) 20, 67
Csp6I GTAC 3 cut(s) 445, 481, 721
CspAI ACCGGT 1 cut(s) 98
CviAII CATG 4 cut(s) 318, 646, 731, 982
CviQI GTAC 3 cut(s) 445, 481, 721
DdeI CTNAG 3 cut(s) 308, 425, 940
DpnI GATC 8 cut(s) 55, 68, 125, 286, 333, 588, 672, 705
DpnII GATC 8 cut(s) 53, 66, 123, 284, 331, 586, 670, 703
DraIII CACNNNGTG 1 cut(s) 250
EaeI YGGCCR 2 cut(s) 151, 292
Ecl136II GAGCTC 1 cut(s) 305
Eco130I CCWWGG 1 cut(s) 637
Eco147I AGGCCT 2 cut(s) 342, 945
Eco24I GRGCYC 1 cut(s) 307
Eco31I GGTCTC 1 cut(s) 143
Eco32I GATATC 1 cut(s) 469
Eco47I GGWCC 2 cut(s) 156, 656
Eco53kI GAGCTC 1 cut(s) 305
Eco88I CYCGRG 1 cut(s) 710
EcoICRI GAGCTC 1 cut(s) 305
EcoRI GAATTC 1 cut(s) 545
EcoRII CCWGG 1 cut(s) 133
EcoRV GATATC 1 cut(s) 469
EcoT14I CCWWGG 1 cut(s) 637
EcoT22I ATGCAT 1 cut(s) 647
EcoT38I GRGCYC 1 cut(s) 307
ErhI CCWWGG 1 cut(s) 637
Esp3I CGTCTC 1 cut(s) 292
FaeI CATG 4 cut(s) 321, 649, 734, 985
FalI AAGNNNNNCTT 2 cut(s) 994, 1026
FaqI GGGAC 1 cut(s) 215
FatI CATG 4 cut(s) 317, 645, 730, 981
FauI CCCGC 1 cut(s) 609
FauNDI CATATG 1 cut(s) 526
Fnu4HI GCNGC 2 cut(s) 522, 994
FokI GGATG 5 cut(s) 334, 654, 820, 856, 979
FriOI GRGCYC 1 cut(s) 307
Fsp4HI GCNGC 2 cut(s) 522, 994
FspBI CTAG 2 cut(s) 774, 986
GlaI GCGC 2 cut(s) 30, 50
GluI GCNGC 2 cut(s) 522, 994
HaeIII GGCC 7 cut(s) 153, 294, 342, 410, 583, 741, 945
HapII CCGG 6 cut(s) 99, 142, 154, 276, 295, 659
HgaI GACGC 2 cut(s) 20, 67
HhaI GCGC 2 cut(s) 31, 51
Hin1I GRCGYC 2 cut(s) 59, 204
Hin1II CATG 4 cut(s) 321, 649, 734, 985
Hin6I GCGC 2 cut(s) 29, 49
HinP1I GCGC 2 cut(s) 29, 49
HincII GTYRAC 1 cut(s) 862
HindII GTYRAC 1 cut(s) 862
HindIII AAGCTT 1 cut(s) 677
HinfI GANTC 5 cut(s) 258, 267, 279, 359, 539
HpaI GTTAAC 1 cut(s) 862
HpaII CCGG 6 cut(s) 99, 142, 154, 276, 295, 659
HphI GGTGA 3 cut(s) 67, 157, 894
Hpy166II GTNNAC 2 cut(s) 862, 890
Hpy188I TCNGA 6 cut(s) 113, 266, 284, 331, 544, 1021
Hpy188III TCNNGA 7 cut(s) 238, 271, 310, 335, 712, 790, 805
Hpy8I GTNNAC 2 cut(s) 862, 890
Hpy99I CGWCG 3 cut(s) 61, 209, 266
HpyAV CCTTC 3 cut(s) 332, 353, 884
HpyCH4III ACNGT 4 cut(s) 187, 485, 603, 800
HpyCH4IV ACGT 3 cut(s) 204, 825, 858
HpyCH4V TGCA 4 cut(s) 440, 524, 530, 645
HpyF10VI GCNNNNNNNGC 4 cut(s) 159, 527, 758, 1002
HpyF3I CTNAG 3 cut(s) 308, 425, 940
HpySE526I ACGT 3 cut(s) 204, 825, 858
Hsp92I GRCGYC 2 cut(s) 59, 204
Hsp92II CATG 4 cut(s) 321, 649, 734, 985
HspAI GCGC 2 cut(s) 29, 49
KspAI GTTAAC 1 cut(s) 862
Kzo9I GATC 8 cut(s) 53, 66, 123, 284, 331, 586, 670, 703
LmnI GCTCC 1 cut(s) 495
Lsp1109I GCAGC 2 cut(s) 508, 980
LweI GCATC 3 cut(s) 312, 632, 834
MaeI CTAG 2 cut(s) 774, 986
MaeII ACGT 3 cut(s) 204, 825, 858
MaeIII GTNAC 4 cut(s) 620, 769, 826, 950
MalI GATC 8 cut(s) 55, 68, 125, 286, 333, 588, 672, 705
MbiI CCGCTC 1 cut(s) 616
MboI GATC 8 cut(s) 53, 66, 123, 284, 331, 586, 670, 703
MboII GAAGA 7 cut(s) 34, 64, 193, 360, 368, 505, 719
MflI RGATCY 3 cut(s) 284, 670, 703
MhlI GDGCHC 2 cut(s) 307, 902
MluCI AATT 1 cut(s) 545
MmeI TCCRAC 2 cut(s) 244, 951
Mph1103I ATGCAT 1 cut(s) 647
MroXI GAANNNNTTC 1 cut(s) 342
MseI TTAA 4 cut(s) 189, 225, 681, 861
MslI CAYNNNNRTG 2 cut(s) 320, 735
MspI CCGG 6 cut(s) 99, 142, 154, 276, 295, 659
MspR9I CCNGG 1 cut(s) 135
MvaI CCWGG 1 cut(s) 135
MvnI CGCG 3 cut(s) 29, 31, 49
MwoI GCNNNNNNNGC 4 cut(s) 159, 527, 758, 1002
NdeI CATATG 1 cut(s) 526
NdeII GATC 8 cut(s) 53, 66, 123, 284, 331, 586, 670, 703
NlaIII CATG 4 cut(s) 321, 649, 734, 985
NlaIV GGNNCC 1 cut(s) 742
NmuCI GTSAC 3 cut(s) 620, 769, 826
NsiI ATGCAT 1 cut(s) 647
NspI RCATGY 1 cut(s) 985
NspV TTCGAA 1 cut(s) 346
PceI AGGCCT 2 cut(s) 342, 945
PcsI WCGNNNNNNNCGW 4 cut(s) 53, 201, 228, 864
PdmI GAANNNNTTC 1 cut(s) 342
PfeI GAWTC 5 cut(s) 258, 267, 279, 359, 539
PinAI ACCGGT 1 cut(s) 98
PkrI GCNGC 2 cut(s) 523, 995
Ple19I CGATCG 1 cut(s) 56
Psp124BI GAGCTC 1 cut(s) 307
Psp1406I AACGTT 1 cut(s) 858
Psp6I CCWGG 1 cut(s) 133
PspGI CCWGG 1 cut(s) 133
PspN4I GGNNCC 1 cut(s) 742
PspPI GGNCC 3 cut(s) 156, 656, 740
PsuI RGATCY 3 cut(s) 284, 670, 703
PvuI CGATCG 1 cut(s) 56
RsaI GTAC 3 cut(s) 446, 482, 722
RsaNI GTAC 3 cut(s) 445, 481, 721
RseI CAYNNNNRTG 2 cut(s) 320, 735
SacI GAGCTC 1 cut(s) 307
SaqAI TTAA 4 cut(s) 189, 225, 681, 861
SatI GCNGC 2 cut(s) 522, 994
Sau3AI GATC 8 cut(s) 53, 66, 123, 284, 331, 586, 670, 703
Sau96I GGNCC 3 cut(s) 156, 656, 740
ScaI AGTACT 1 cut(s) 722
ScrFI CCNGG 1 cut(s) 135
SduI GDGCHC 2 cut(s) 307, 902
SfaNI GCATC 3 cut(s) 312, 632, 834
SfuI TTCGAA 1 cut(s) 346
SinI GGWCC 2 cut(s) 156, 656
SmiMI CAYNNNNRTG 2 cut(s) 320, 735
SmlI CTYRAG 2 cut(s) 577, 788
SmoI CTYRAG 2 cut(s) 577, 788
SpeI ACTAGT 1 cut(s) 773
Sse9I AATT 1 cut(s) 545
SseBI AGGCCT 2 cut(s) 342, 945
SsiI CCGC 1 cut(s) 616
SspMI CTAG 2 cut(s) 774, 986
SstI GAGCTC 1 cut(s) 307
StuI AGGCCT 2 cut(s) 342, 945
StyD4I CCNGG 1 cut(s) 133
StyI CCWWGG 1 cut(s) 637
TaaI ACNGT 4 cut(s) 187, 485, 603, 800
TaiI ACGT 3 cut(s) 207, 828, 861
TaqI TCGA 4 cut(s) 56, 346, 465, 471
TaqII GACCGA 1 cut(s) 80
TasI AATT 1 cut(s) 545
TatI WGTACW 2 cut(s) 480, 720
TfiI GAWTC 5 cut(s) 258, 267, 279, 359, 539
Tru1I TTAA 4 cut(s) 189, 225, 681, 861
Tru9I TTAA 4 cut(s) 189, 225, 681, 861
TseFI GTSAC 3 cut(s) 620, 769, 826
TseI GCWGC 2 cut(s) 521, 993
Tsp45I GTSAC 3 cut(s) 620, 769, 826
TspDTI ATGAA 4 cut(s) 662, 705, 719, 869
VpaK11BI GGWCC 2 cut(s) 156, 656
XapI RAATTY 1 cut(s) 545
XceI RCATGY 1 cut(s) 985
XcmI CCANNNNNNNNNTGG 1 cut(s) 681
XmnI GAANNNNTTC 1 cut(s) 342
XspI CTAG 2 cut(s) 774, 986
ZraI GACGTC 1 cut(s) 205
ZrmI AGTACT 1 cut(s) 722
Zsp2I ATGCAT 1 cut(s) 647
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.