Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0000964

Physical Location & Seq

Genomic Coordinates Reverse (-)

5169095 .. 5173105

Gene Structure 4011 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G15354.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2514 bp

ATGGAAGGTTCTTCAAATTCTAACTCTAGGGGATTCAATACCTCTGGTGTTTCAGATAGGAACACTGAGTTCTTACCTGTTGAGAGACTCACTACTCGTTCCAAGCCTTCCTCTCATGTTGATGAGTATGTCAGAAGCTTGTTTGGTAGTACTAGCACACACAAGTCTGGTGAAGATGATTCTTTAGGGATTGATCCTTTTGTTAGATCCTTGGAATGGGGTGATGTTAGTTTGAGACAGTGGCTGGATAAACCTGAACGATCTGTTGATGTTTTCGAGTGCTTGCACGTTTTCAGACAAATTGTTGAGATTGTGAATGCGGCTCACTCTCAAGGCATTGTTGTTCATAATGTCAGGCCATCATGTTTTGTCATGTCTTCGTTTAACCATGTTTCGTTCATTGAATCTGCTTCTTGTTCGGACTCTGGCTCTGATTCCTTGGAGGATGGTCCAATTAGCCAGAAGGAAATCGGTAGCTCGAGAAGAGAGGAAGCTGTATCGAAAGCTATTGCAATAGAAGAGAAAGGAGTCTACAATAAGTTGTTGGAGAGAAAAATCGAGAAACTAGAGGAAGAAAAAACCCAACCTTTTCCGATGAAACATATATTAGCAATGGAGACAAGTTGGTACACAAGCCCTGAAGAGGATTTTGGTTCTTCAAGTACTTGTGCTTCAGATGTTTACCGCCTTGGCGTTCTTCTTTTCGAGCTATTTTGCCCTGTACCTTCAAGAGAAGAGAAGTCTAGAACTATGTCTAGTCTTAGACATCGCGTTCTTCCGCCTCAGATATTGCTCAAATGTCCAAAAGAAGCTTCTTTCTGCTTGTGGTTACTGCATCCTGAGCCAACTTGTCGACCATCAATGAGTGACTTGCTGCAAAGCGAGTTTATAACTGAACCTAGAGATAATTTGGAAGAACGTGAAGCAGCAATCGAGCTTCGGGACAGAATCGAGGAACAGGAGTCGTTACTCGAGTTCTTGTTACTGATTCAACAGAGGAAGCAAGAATCTGCGTATAGATTGCAGGATACTGTTTCACTTCTTTCTTCTGACATTGAGCAAGTTGTAAAGAGACAGTTAATTTTGAAGAAAAGGGGAAGCTCACTCTCTGATTTCAGTAAAGATGATCATCAATATACCTCTGGTCAGCCATTGATGAGTTTCCAGGCAAACGAGGAGCCATCAGCATTCTTGGCCTCAAGAAAACGGGTTAGACAAGGGATTCTGGCATTGGAAAACGGTGTTGAAGTTGATGAAGAGAGTCAAGGAAGCACACTTCTTGAAAGCTCCCGGTTGATGAGAAACTTCAAGAAACTAGAATCGGTCTACTTTCTGACAAGGCGCAGGCAAATGAAGGCTGCTGCTTCAGGGAAATCATTAACTAGACATTCGCCGTTAAGTAGTGAAAATGGAAGAGGTTCTATGATTGTCTCAGAGAAAAGTTCAGTAAGCAACCCGGTGGCACCCAAAGCTTTCTTCAATAATGACTCGAGACAAGGGGGGTGGATAGATCCTTTCCTTGAGGGTTTGTGCAGATATTTATCATTCAGTCAGCTAAGAGTGAAAGCTGATTTGAAACAAGGAGATTTGTTGAACTCTTCTAACCTCGTTTGCGCTCTTGCGTTTGACCGAGAAGGAGAATTATTCGCCACTGCGGGAGTCAACAAGAAAATCAAGATATTCGAATGTAACTCCATAGTAAACGATAACCGGGATATTCACTATCCGGTGGTGGAATTGGCTGGTCGGTCAAAGCTAAGTAGTTTATGTTGGAACAGCTACATAAAGAGCCAAATTGCATCAAGTAACTTTGATGGTGTTGTTCAGATATGGGATGTTGCAAGAAGCCAGTTGGTTACAGAGATGAAGGAGCACAAGAAGCGAGTATGGTCCATCGATATTTCATCAGCAGACCCGACTTTGCTGGCTAGCGGAAGCGATGATGGAACCGGAGTTAGCATTGGGACCATCAAGACAAAGGCCAATGTATGCTGTGTCCAGTTTCCATCAGACTCCGGACGGTCTCTAGCATTTGGTTCTGCAGATCATAAAGTGTATTACTACGATCTTCGAAACCCCAAGATTCCTCTGTGCACAATGATTGGTCATAGCAAGACAGTGAGTTATGTCAAGTTTGTAGATTCATCCACTCTTGTGTCCTCTTCTACTGATAACACACTGAAGCTTTGGGACTTGTCGATGTCTGCTTCTGGGATTAATGAATCCCCTCTTCACTCATTCACTGGACACACTAATTTAAAGAACTTTGTTGGCTTATCGGTCTCTGATGGGTATATAGCAACAGGCTCAGAGACTAACGAGGTTTTCGTGTACCACAAGGCATTCCCAATGCCAGTGATGTCGTACATGTTCAACAACACTGACTCTATGTCTGGTCTCGAAGTGGACGATGCATCACAGTTCATATCTTCAATCTGCTGGCGAGGACAGTCGTCTACGTTAGTCGCTGCTAACTCCAATGGCAACATAAAAATTCTGGAGATGATGACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009637 GO:0031461 GO:0032991 GO:0042802 GO:0044424 GO:0044464 GO:0050896 GO:0080008 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko04115 ko04120 ko04712 map04115 map04120 map04712

Pfam Domains

Protein Families

Pkinase WD40

Protein Analysis

837

Amino Acids

93.38

Weight (kDa)

5.81

Isoelectric Point (pI)

58.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_WDR5	PF25175	534 - 650	1.2e-11	WDR5 beta-propeller domain
Beta-prop_WDR3_1st	PF25173	535 - 648	4.4e-09	WDR3 first beta-propeller domain
WD40_CDC20-Fz	PF24807	582 - 650	2.3e-06	CDC20/Fizzy WD40 domain
Beta-prop_THOC3	PF25174	584 - 775	3.5e-19	THOC3 beta-propeller domain
Beta-prop_EML_2	PF23414	597 - 735	3e-10	Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR36-Utp21_1st	PF25171	654 - 730	6.5e-08	WDR36/Utp21 first beta-propeller
Beta-prop_EIPR1	PF23609	655 - 730	7.6e-06	EIPR1 beta-propeller
WD40_WDHD1_1st	PF24817	657 - 735	4.3e-08	WDHD1 first WD40 domain
WD40_Prp19	PF24814	659 - 771	2.4e-09	Prp19 WD40 domain
Beta-prop_WDR5	PF25175	660 - 812	3.6e-13	WDR5 beta-propeller domain
Beta-prop_WDR3_1st	PF25173	660 - 778	5.7e-13	WDR3 first beta-propeller domain
WD40_CDC20-Fz	PF24807	660 - 752	1.2e-08	CDC20/Fizzy WD40 domain
Beta-prop_TEP1_2nd	PF25047	660 - 752	1.3e-09	TEP-1 second beta-propeller
Beta-prop_THOC3	PF25174	661 - 835	7.9e-12	THOC3 beta-propeller domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000964)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53090 AT1G53090 AT1G53090 AT1G53090 AT1G53090 AT3G15354 AT3G15354 AT3G15354 AT3G15354 AT3G15354
fragaria_vesca	FvH4_3g19920 FvH4_3g19920 FvH4_3g19920 FvH4_3g19920 FvH4_3g19920 FvH4_3g19920 FvH4_3g19920 FvH4_3g19920 FvH4_3g19920 FvH4_3g19920 FvH4_3g19920 FvH4_3g19920 FvH4_3g19920 FvH4_3g19920 FvH4_3g19920 FvH4_3g19920 FvH4_3g19920 FvH4_3g19920 FvH4_3g19920
malus_domestica	MD03G1228100.v1.1 MD11G1247500.v1.1
prunus_persica	Prupe.4G180900_v2.0.a1 Prupe.4G180900_v2.0.a1 Prupe.4G180900_v2.0.a1 Prupe.4G180900_v2.0.a1 Prupe.4G180900_v2.0.a1 Prupe.4G180900_v2.0.a1 Prupe.4G180900_v2.0.a1 Prupe.4G180900_v2.0.a1 Prupe.4G180900_v2.0.a1 Prupe.4G180900_v2.0.a1 Prupe.4G180900_v2.0.a1 Prupe.4G180900_v2.0.a1 Prupe.4G180900_v2.0.a1 Prupe.4G180900_v2.0.a1 Prupe.4G180900_v2.0.a1 Prupe.4G180900_v2.0.a1 Prupe.4G180900_v2.0.a1
pyrus_communis	pycom03g17550 pycom11g22000
rosa_chinensis	RchiOBHm_Chr5g0033591
rosa_laevigata	RLG00000033491
rosa_roxburghii	Rroxscaffold_1G00046490
rosa_rugosa	Rorug05G0140300 Rorug05G0140400 Rorug05G0140500 Rorug05G0140600 Rorug05G0140700
rosa_samantha	Rh5AG232000 Rh5BG232700 Rh5CG261600 Rh5DG238300
rosa_wichuraiana	Rw5G021170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	890
AccB1I	GGYRCC	1 cut(s)	1462
AccI	GTMKAC	4 cut(s)	531, 853, 1326, 2456
AccII	CGCG	1 cut(s)	771
AccIII	TCCGGA	1 cut(s)	2015
AciI	CCGC	5 cut(s)	320, 685, 779, 1655, 1932
AclWI	GGATC	3 cut(s)	188, 201, 1505
AcsI	RAATTY	2 cut(s)	16, 2493
AcuI	CTGAAG	4 cut(s)	657, 660, 1350, 2201
AfaI	GTAC	6 cut(s)	151, 629, 664, 723, 2333, 2366
AfiI	CCNNNNNNNGG	2 cut(s)	216, 643
AflIII	ACRYGT	1 cut(s)	2367
AhdI	GACNNNNNGTC	1 cut(s)	2389
AjnI	CCWGG	1 cut(s)	1164
AjuI	GAANNNNNNNTTGG	6 cut(s)	633, 665, 796, 828, 1460, 1492
AleI	CACNNNNGTG	1 cut(s)	2153
Alw21I	GWGCWC	2 cut(s)	1875, 2096
Alw44I	GTGCAC	1 cut(s)	2092
AlwI	GGATC	3 cut(s)	188, 201, 1505
AlwNI	CAGNNNCTG	1 cut(s)	244
Ama87I	CYCGRG	3 cut(s)	478, 971, 1489
Aor13HI	TCCGGA	1 cut(s)	2015
AoxI	GGCC	3 cut(s)	356, 1194, 1980
ApaLI	GTGCAC	1 cut(s)	2092
ApeKI	GCWGC	5 cut(s)	874, 926, 1358, 1361, 2468
ApoI	RAATTY	2 cut(s)	16, 2493
AseI	ATTAAT	1 cut(s)	2217
Asp700I	GAANNNNTTC	1 cut(s)	1417
AspLEI	GCGC	2 cut(s)	1344, 1616
AspS9I	GGNCC	3 cut(s)	449, 1890, 1965
AsuC2I	CCSGG	3 cut(s)	1291, 1457, 1712
AsuHPI	GGTGA	2 cut(s)	182, 233
AsuII	TTCGAA	2 cut(s)	1683, 2071
AsuNHI	GCTAGC	1 cut(s)	1928
AvaI	CYCGRG	3 cut(s)	478, 971, 1489
AvaII	GGWCC	3 cut(s)	449, 1890, 1965
BaeGI	GKGCMC	1 cut(s)	2096
BanI	GGYRCC	1 cut(s)	1462
BarI	GAAGNNNNNNTAC	2 cut(s)	655, 687
BbsI	GAAGAC	1 cut(s)	369
Bbv12I	GWGCWC	2 cut(s)	1875, 2096
BbvI	GCAGC	5 cut(s)	861, 938, 1345, 1348, 2455
BceAI	ACGGC	1 cut(s)	1378
BciT130I	CCWGG	1 cut(s)	1166
BciVI	GTATCC	1 cut(s)	1021
BclI	TGATCA	1 cut(s)	1126
BcnI	CCSGG	3 cut(s)	1291, 1457, 1712
BfmI	CTRYAG	1 cut(s)	2040
BfuI	GTATCC	1 cut(s)	1021
BisI	GCNGC	6 cut(s)	321, 875, 927, 1359, 1362, 2469
BlsI	GCNGC	6 cut(s)	322, 876, 928, 1360, 1363, 2470
BmcAI	AGTACT	2 cut(s)	151, 664
Bme1390I	CCNGG	4 cut(s)	1166, 1291, 1457, 1712
Bme18I	GGWCC	3 cut(s)	449, 1890, 1965
BmeRI	GACNNNNNGTC	1 cut(s)	2389
BmeT110I	CYCGRG	3 cut(s)	478, 971, 1489
BmgT120I	GGNCC	3 cut(s)	449, 1890, 1965
BmiI	GGNNCC	4 cut(s)	1179, 1464, 1948, 1966
BmrFI	CCNGG	4 cut(s)	1166, 1291, 1457, 1712
BmsI	GCATC	4 cut(s)	844, 1808, 2401, 2423
BmtI	GCTAGC	1 cut(s)	1932
BoxI	GACNNNNGTC	1 cut(s)	2452
BpiI	GAAGAC	1 cut(s)	369
Bpu10I	CCTNAGC	1 cut(s)	840
Bpu14I	TTCGAA	2 cut(s)	1683, 2071
BpuEI	CTTGAG	3 cut(s)	315, 1183, 1541
BpuMI	CCSGG	3 cut(s)	1291, 1457, 1712
Bsa29I	ATCGAT	1 cut(s)	1896
BsaBI	GATNNNNATC	2 cut(s)	1128, 1540
BsaI	GGTCTC	3 cut(s)	2028, 2287, 2402
BsaJI	CCNNGG	3 cut(s)	210, 438, 688
BsaWI	WCCGGW	3 cut(s)	1726, 1949, 2015
Bsc4I	CCNNNNNNNGG	2 cut(s)	216, 643
Bse1I	ACTGG	4 cut(s)	1849, 1999, 2248, 2354
Bse3DI	GCAATG	1 cut(s)	618
Bse8I	GATNNNNATC	2 cut(s)	1128, 1540
BseAI	TCCGGA	1 cut(s)	2015
BseBI	CCWGG	1 cut(s)	1166
BseCI	ATCGAT	1 cut(s)	1896
BseDI	CCNNGG	3 cut(s)	210, 438, 688
BseGI	GGATG	4 cut(s)	451, 835, 1840, 2144
BseJI	GATNNNNATC	2 cut(s)	1128, 1540
BseLI	CCNNNNNNNGG	2 cut(s)	216, 643
BseMI	GCAATG	1 cut(s)	618
BseMII	CTCAG	5 cut(s)	57, 797, 831, 1446, 2322
BseNI	ACTGG	4 cut(s)	1849, 1999, 2248, 2354
BseRI	GAGGAG	1 cut(s)	1190
BseSI	GKGCMC	1 cut(s)	2096
BseXI	GCAGC	5 cut(s)	861, 938, 1345, 1348, 2455
BsgI	GTGCAG	1 cut(s)	1552
Bsh1236I	CGCG	1 cut(s)	771
BshFI	GGCC	3 cut(s)	358, 1196, 1982
BshNI	GGYRCC	1 cut(s)	1462
BshVI	ATCGAT	1 cut(s)	1896
BsiHKAI	GWGCWC	2 cut(s)	1875, 2096
BsiHKCI	CYCGRG	3 cut(s)	478, 971, 1489
BsiSI	CCGG	6 cut(s)	1291, 1457, 1711, 1727, 1950, 2016
BslFI	GGGAC	3 cut(s)	956, 1978, 2204
BslI	CCNNNNNNNGG	2 cut(s)	216, 643
BsmFI	GGGAC	3 cut(s)	956, 1978, 2204
BsmI	GAATGC	3 cut(s)	322, 1187, 2342
BsnI	GGCC	3 cut(s)	358, 1196, 1982
Bso31I	GGTCTC	3 cut(s)	2028, 2287, 2402
BsoBI	CYCGRG	3 cut(s)	478, 971, 1489
Bsp119I	TTCGAA	2 cut(s)	1683, 2071
Bsp1286I	GDGCHC	2 cut(s)	1875, 2096
Bsp13I	TCCGGA	1 cut(s)	2015
Bsp143I	GATC	7 cut(s)	193, 206, 260, 1126, 1510, 2044, 2065
BspACI	CCGC	5 cut(s)	320, 685, 779, 1655, 1932
BspANI	GGCC	3 cut(s)	358, 1196, 1982
BspCNI	CTCAG	5 cut(s)	58, 796, 832, 1445, 2321
BspDI	ATCGAT	1 cut(s)	1896
BspEI	TCCGGA	1 cut(s)	2015
BspFNI	CGCG	1 cut(s)	771
BspLI	GGNNCC	4 cut(s)	1179, 1464, 1948, 1966
BspMAI	CTGCAG	1 cut(s)	2044
BspOI	GCTAGC	1 cut(s)	1932
BspPI	GGATC	3 cut(s)	188, 201, 1505
BspT104I	TTCGAA	2 cut(s)	1683, 2071
BspT107I	GGYRCC	1 cut(s)	1462
BspTNI	GGTCTC	3 cut(s)	2028, 2287, 2402
BsrDI	GCAATG	1 cut(s)	618
BsrI	ACTGG	4 cut(s)	1849, 1999, 2248, 2354
BssECI	CCNNGG	3 cut(s)	210, 438, 688
BssMI	GATC	7 cut(s)	193, 206, 260, 1126, 1510, 2044, 2065
BssT1I	CCWWGG	3 cut(s)	210, 438, 688
Bst2UI	CCWGG	1 cut(s)	1166
Bst4CI	ACNGT	8 cut(s)	240, 1033, 1077, 1241, 2022, 2119, 2421, 2451
Bst6I	CTCTTC	9 cut(s)	478, 513, 636, 729, 1251, 1408, 1603, 2167, 2235
BstBI	TTCGAA	2 cut(s)	1683, 2071
BstC8I	GCNNGC	5 cut(s)	284, 1346, 1926, 1930, 2441
BstDEI	CTNAG	8 cut(s)	66, 761, 783, 840, 1432, 1556, 1757, 2308
BstF5I	GGATG	4 cut(s)	451, 835, 1840, 2144
BstFNI	CGCG	1 cut(s)	771
BstHHI	GCGC	2 cut(s)	1344, 1616
BstKTI	GATC	7 cut(s)	196, 209, 263, 1129, 1513, 2047, 2068
BstMBI	GATC	7 cut(s)	193, 206, 260, 1126, 1510, 2044, 2065
BstMWI	GCNNNNNNNGC	4 cut(s)	841, 1193, 1469, 1879
BstNI	CCWGG	1 cut(s)	1166
BstNSI	RCATGY	1 cut(s)	2371
BstPAI	GACNNNNGTC	1 cut(s)	2452
BstSCI	CCNGG	4 cut(s)	1164, 1289, 1455, 1710
BstSFI	CTRYAG	1 cut(s)	2040
BstSLI	GKGCMC	1 cut(s)	2096
BstUI	CGCG	1 cut(s)	771
BstV1I	GCAGC	5 cut(s)	861, 938, 1345, 1348, 2455
BstV2I	GAAGAC	1 cut(s)	369
BstX2I	RGATCY	2 cut(s)	206, 1510
BstYI	RGATCY	2 cut(s)	206, 1510
Bsu15I	ATCGAT	1 cut(s)	1896
BsuI	GTATCC	1 cut(s)	1021
BsuRI	GGCC	3 cut(s)	358, 1196, 1982
BsuTUI	ATCGAT	1 cut(s)	1896
BtgZI	GCGATG	2 cut(s)	752, 1953
BtsCI	GGATG	4 cut(s)	451, 835, 1840, 2144
BtsI	GCAGTG	1 cut(s)	1650
BtsIMutI	CAGTG	8 cut(s)	63, 245, 1650, 2124, 2177, 2241, 2361, 2379
Cac8I	GCNNGC	5 cut(s)	284, 1346, 1926, 1930, 2441
CaiI	CAGNNNCTG	1 cut(s)	244
CfoI	GCGC	2 cut(s)	1344, 1616
Cfr13I	GGNCC	3 cut(s)	449, 1890, 1965
ClaI	ATCGAT	1 cut(s)	1896
Csp6I	GTAC	6 cut(s)	150, 628, 663, 722, 2332, 2365
CspCI	CAANNNNNGTGG	2 cut(s)	1484, 1519
CviAII	CATG	5 cut(s)	116, 363, 373, 389, 2368
CviQI	GTAC	6 cut(s)	150, 628, 663, 722, 2332, 2365
DdeI	CTNAG	8 cut(s)	66, 761, 783, 840, 1432, 1556, 1757, 2308
DpnI	GATC	7 cut(s)	195, 208, 262, 1128, 1512, 2046, 2067
DpnII	GATC	7 cut(s)	193, 206, 260, 1126, 1510, 2044, 2065
DraI	TTTAAA	1 cut(s)	2259
DriI	GACNNNNNGTC	1 cut(s)	2389
Eam1104I	CTCTTC	9 cut(s)	478, 513, 636, 729, 1251, 1408, 1603, 2167, 2235
Eam1105I	GACNNNNNGTC	1 cut(s)	2389
EarI	CTCTTC	9 cut(s)	478, 513, 636, 729, 1251, 1408, 1603, 2167, 2235
EciI	GGCGGA	1 cut(s)	768
Eco130I	CCWWGG	3 cut(s)	210, 438, 688
Eco31I	GGTCTC	3 cut(s)	2028, 2287, 2402
Eco47I	GGWCC	3 cut(s)	449, 1890, 1965
Eco57I	CTGAAG	4 cut(s)	657, 660, 1350, 2201
Eco88I	CYCGRG	3 cut(s)	478, 971, 1489
EcoRII	CCWGG	1 cut(s)	1164
EcoT14I	CCWWGG	3 cut(s)	210, 438, 688
EcoT22I	ATGCAT	1 cut(s)	2416
ErhI	CCWWGG	3 cut(s)	210, 438, 688
FaeI	CATG	5 cut(s)	119, 366, 376, 392, 2371
FaqI	GGGAC	3 cut(s)	956, 1978, 2204
FatI	CATG	5 cut(s)	115, 362, 372, 388, 2367
FauI	CCCGC	1 cut(s)	1648
FbaI	TGATCA	1 cut(s)	1126
FblI	GTMKAC	4 cut(s)	531, 853, 1326, 2456
Fnu4HI	GCNGC	6 cut(s)	321, 875, 927, 1359, 1362, 2469
FokI	GGATG	4 cut(s)	458, 822, 1847, 2131
Fsp4HI	GCNGC	6 cut(s)	321, 875, 927, 1359, 1362, 2469
GlaI	GCGC	2 cut(s)	1343, 1615
GluI	GCNGC	6 cut(s)	321, 875, 927, 1359, 1362, 2469
HaeIII	GGCC	3 cut(s)	358, 1196, 1982
HapII	CCGG	6 cut(s)	1291, 1457, 1711, 1727, 1950, 2016
HhaI	GCGC	2 cut(s)	1344, 1616
Hin1II	CATG	5 cut(s)	119, 366, 376, 392, 2371
Hin6I	GCGC	2 cut(s)	1342, 1614
HinP1I	GCGC	2 cut(s)	1342, 1614
HincII	GTYRAC	2 cut(s)	854, 1663
HindII	GTYRAC	2 cut(s)	854, 1663
HindIII	AAGCTT	4 cut(s)	136, 810, 1470, 2183
HpaII	CCGG	6 cut(s)	1291, 1457, 1711, 1727, 1950, 2016
HphI	GGTGA	2 cut(s)	182, 233
HpyAV	CCTTC	6 cut(s)	117, 457, 735, 1348, 1628, 1861
HpyCH4III	ACNGT	8 cut(s)	240, 1033, 1077, 1241, 2022, 2119, 2421, 2451
HpyCH4IV	ACGT	3 cut(s)	288, 919, 2459
HpyF10VI	GCNNNNNNNGC	4 cut(s)	841, 1193, 1469, 1879
HpyF3I	CTNAG	8 cut(s)	66, 761, 783, 840, 1432, 1556, 1757, 2308
HpySE526I	ACGT	3 cut(s)	288, 919, 2459
Hsp92II	CATG	5 cut(s)	119, 366, 376, 392, 2371
HspAI	GCGC	2 cut(s)	1342, 1614
Kpn2I	TCCGGA	1 cut(s)	2015
Ksp22I	TGATCA	1 cut(s)	1126
Kzo9I	GATC	7 cut(s)	193, 206, 260, 1126, 1510, 2044, 2065
LmnI	GCTCC	3 cut(s)	1177, 1292, 1870
Lsp1109I	GCAGC	5 cut(s)	861, 938, 1345, 1348, 2455
LweI	GCATC	4 cut(s)	844, 1808, 2401, 2423
MaeII	ACGT	3 cut(s)	288, 919, 2459
MaeIII	GTNAC	7 cut(s)	828, 866, 966, 981, 1688, 1805, 1855
MalI	GATC	7 cut(s)	195, 208, 262, 1128, 1512, 2046, 2067
MboI	GATC	7 cut(s)	193, 206, 260, 1126, 1510, 2044, 2065
MflI	RGATCY	2 cut(s)	206, 1510
MhlI	GDGCHC	2 cut(s)	1875, 2096
MlyI	GAGTC	9 cut(s)	81, 416, 537, 971, 1270, 1481, 1668, 2006, 2378
MmeI	TCCRAC	2 cut(s)	525, 1751
Mph1103I	ATGCAT	1 cut(s)	2416
MroI	TCCGGA	1 cut(s)	2015
MroXI	GAANNNNTTC	1 cut(s)	1417
MseI	TTAA	6 cut(s)	384, 1079, 1379, 1397, 2217, 2258
MslI	CAYNNNNRTG	2 cut(s)	120, 2153
MspI	CCGG	6 cut(s)	1291, 1457, 1711, 1727, 1950, 2016
MspR9I	CCNGG	4 cut(s)	1166, 1291, 1457, 1712
Mva1269I	GAATGC	3 cut(s)	322, 1187, 2342
MvaI	CCWGG	1 cut(s)	1166
MvnI	CGCG	1 cut(s)	771
MwoI	GCNNNNNNNGC	4 cut(s)	841, 1193, 1469, 1879
NciI	CCSGG	3 cut(s)	1291, 1457, 1712
NdeII	GATC	7 cut(s)	193, 206, 260, 1126, 1510, 2044, 2065
NheI	GCTAGC	1 cut(s)	1928
NlaIII	CATG	5 cut(s)	119, 366, 376, 392, 2371
NlaIV	GGNNCC	4 cut(s)	1179, 1464, 1948, 1966
NmuCI	GTSAC	1 cut(s)	866
NsiI	ATGCAT	1 cut(s)	2416
NspI	RCATGY	1 cut(s)	2371
NspV	TTCGAA	2 cut(s)	1683, 2071
OliI	CACNNNNGTG	1 cut(s)	2153
PaeR7I	CTCGAG	3 cut(s)	478, 971, 1489
PciI	ACATGT	1 cut(s)	2367
PcsI	WCGNNNNNNNCGW	2 cut(s)	2325, 2406
PctI	GAATGC	3 cut(s)	322, 1187, 2342
PdmI	GAANNNNTTC	1 cut(s)	1417
PkrI	GCNGC	6 cut(s)	322, 876, 928, 1360, 1363, 2470
PleI	GAGTC	9 cut(s)	81, 416, 536, 970, 1269, 1481, 1667, 2006, 2378
PpsI	GAGTC	9 cut(s)	81, 416, 536, 970, 1269, 1481, 1667, 2006, 2378
PscI	ACATGT	1 cut(s)	2367
PshAI	GACNNNNGTC	1 cut(s)	2452
PshBI	ATTAAT	1 cut(s)	2217
PsiI	TTATAA	1 cut(s)	890
Psp6I	CCWGG	1 cut(s)	1164
PspGI	CCWGG	1 cut(s)	1164
PspN4I	GGNNCC	4 cut(s)	1179, 1464, 1948, 1966
PspPI	GGNCC	3 cut(s)	449, 1890, 1965
PspXI	VCTCGAGB	1 cut(s)	971
PstI	CTGCAG	1 cut(s)	2044
PstNI	CAGNNNCTG	1 cut(s)	244
PsuI	RGATCY	2 cut(s)	206, 1510
RsaI	GTAC	6 cut(s)	151, 629, 664, 723, 2333, 2366
RsaNI	GTAC	6 cut(s)	150, 628, 663, 722, 2332, 2365
RseI	CAYNNNNRTG	2 cut(s)	120, 2153
SalI	GTCGAC	1 cut(s)	852
SaqAI	TTAA	6 cut(s)	384, 1079, 1379, 1397, 2217, 2258
SatI	GCNGC	6 cut(s)	321, 875, 927, 1359, 1362, 2469
Sau3AI	GATC	7 cut(s)	193, 206, 260, 1126, 1510, 2044, 2065
Sau96I	GGNCC	3 cut(s)	449, 1890, 1965
ScaI	AGTACT	2 cut(s)	151, 664
SchI	GAGTC	9 cut(s)	81, 416, 537, 971, 1270, 1481, 1668, 2006, 2378
ScrFI	CCNGG	4 cut(s)	1166, 1291, 1457, 1712
SduI	GDGCHC	2 cut(s)	1875, 2096
SfaNI	GCATC	4 cut(s)	844, 1808, 2401, 2423
SfcI	CTRYAG	1 cut(s)	2040
Sfr274I	CTCGAG	3 cut(s)	478, 971, 1489
SfuI	TTCGAA	2 cut(s)	1683, 2071
SinI	GGWCC	3 cut(s)	449, 1890, 1965
SlaI	CTCGAG	3 cut(s)	478, 971, 1489
SmiMI	CAYNNNNRTG	2 cut(s)	120, 2153
SmlI	CTYRAG	6 cut(s)	330, 478, 971, 1198, 1489, 1520
SmoI	CTYRAG	6 cut(s)	330, 478, 971, 1198, 1489, 1520
SsiI	CCGC	5 cut(s)	320, 685, 779, 1655, 1932
StyD4I	CCNGG	4 cut(s)	1164, 1289, 1455, 1710
StyI	CCWWGG	3 cut(s)	210, 438, 688
TaaI	ACNGT	8 cut(s)	240, 1033, 1077, 1241, 2022, 2119, 2421, 2451
TaiI	ACGT	3 cut(s)	291, 922, 2462
TaqII	GACCGA	4 cut(s)	1312, 1644, 1737, 2269
TatI	WGTACW	2 cut(s)	149, 662
TauI	GCSGC	1 cut(s)	323
Tru1I	TTAA	6 cut(s)	384, 1079, 1379, 1397, 2217, 2258
Tru9I	TTAA	6 cut(s)	384, 1079, 1379, 1397, 2217, 2258
TscAI	CASTG	8 cut(s)	70, 245, 1657, 2124, 2184, 2248, 2361, 2386
TseFI	GTSAC	1 cut(s)	866
TseI	GCWGC	5 cut(s)	874, 926, 1358, 1361, 2468
Tsp45I	GTSAC	1 cut(s)	866
TspRI	CASTG	8 cut(s)	70, 245, 1657, 2124, 2184, 2248, 2361, 2386
VneI	GTGCAC	1 cut(s)	2092
VpaK11BI	GGWCC	3 cut(s)	449, 1890, 1965
VspI	ATTAAT	1 cut(s)	2217
XapI	RAATTY	2 cut(s)	16, 2493
XbaI	TCTAGA	1 cut(s)	743
XceI	RCATGY	1 cut(s)	2371
XhoI	CTCGAG	3 cut(s)	478, 971, 1489
XmiI	GTMKAC	4 cut(s)	531, 853, 1326, 2456
XmnI	GAANNNNTTC	1 cut(s)	1417
ZrmI	AGTACT	2 cut(s)	151, 664
Zsp2I	ATGCAT	1 cut(s)	2416

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.