Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr11

Orthogroup ID

OG0000964

Physical Location & Seq

Genomic Coordinates Forward (+)

24991614 .. 24996009

Gene Structure 4396 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom11g22000.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2700 bp

ATGTGTGTGTTCTGGCTTTCATGCTGCTATAGGCGGATAACAATGGAAGGCTCATCCGAGTCTGCTGGGCAGAATTCTGATAGTTCTAGAGGGTTGAATACTTCCAGAGTCTCAAACTGGAATCCTAGGGTTCGTCGTGCTGGAAGGTTTGGCGCGTTGGGTGAGGCATTTCAGGATTCGGATTTGAGAAAGGAGAGAGATAGTGTTGTGGTGGCACACACTGATGACCTTACAAACCAGGGTGGATTGTCCGGGGTTTGTGAGGATGAGGTGGCGGTTGACCGTTTTGTCCGAGCTATTGAATGGGGTGATGTTAGCTTGAGGCAGTGGTTGGATAAACCGGATCGATCTGTTGATGTATTTGAATGCTTGCATGTATTTAGGCAAATAGTGGAAATTATTAGTGTAGCACATTCGCAAGGGATTGTTGTTCACAATGTGCGACCTTCATGTTTCGTCATGTCATCTTTCAACCACATCTCCTTTATCGAGTCTGCATCTTGTTCGGATTCTGGCACTGATTCTCCCGAGGATGAGTTAAACAGCCCAACTGAAGAAATTAAGGATTTCCCCCCTCTCTTGCATCGTAATTTGCATCAGCAACGAAGGAACTTAGGAAGAGAAAATTTTCAGTCTATGACAACTCCAAATGCCTTGTCGGAAACGAGTTGCATGCAGTCAAGTTCAATTTATGCAGCACGGGAATCGTTGGTACAAGAGAGTGAAAATAGAATCAGAGACCGAAATGTTGAACTAGAAGATAAGAGACAACCATTTCCAATGAAACAGATATTGCTTATGGAGACCAGTTGGTATACTAGTCCCGAAGAGGTTTCTGCTGGATCGAGTTCATGTGCTTCAGACATTTATCGGTTAGGGGTTCTTCTTTTTGAGTTATTCTGTCCCCTCAGCTCAAGAGAAGAAAAGAGCAGAACAATGTCTAGTCTGAGACATCGAGTTCTTCCTCCTCAATTGCTGCTGAAATGGCCTAAAGAGGCTTCGTTTTGTTTATGGCTACTGCACCCTGAGCCAAATAGCCGGCCAAAAATGTGTGAGTTGCAACAAAGTGAATTCCTGAATGAACCAAGAGTTGATTTAGAAGAACGTGAAGCGGCAATAGAGCTTAGAGAGAAAATAGAGGAGCAGGAATTATTGCTGGAATTCCTGCTGCTCATACAACAAGGGAAACAGGAATCTGCAGATAAGTTGCAAAATACTCTTTCGTTTCTGTGTTGTGATATTGACGAAGTTATGAAGCACCAAATAACTTCTAAGAAAAAGGGCAGTTCAATCCCACAACTGGTGAAGGAAGATGATTCGACCTCAAGTTTCCCGTCTATGAATGTTATTGACGATGATGATTCTGCTAGTGGGTCCAGAAAAAGGTCCAGACCAGGCATCTGGGTTCACAACGTAGAGGAAAGCGATGATAATTTGGATGGTCAGAAGACGGATACTGAAAATCAAGGTGTTCTCTCGAGAAGTTCTAGATTGATGAAGAACTTTAAAAAGCTAGAGGCGGCATATTTTTTAACGAGATGGAGGCCTGTAAAGCAGTCAGCTAAACCGGCTAAACATTCACCAATAAGTAGTTCTGTTGTAACTGAAAGAAGTTCTGTCAATAATTTGCAATCAAAAGAACAACATAGTGGAGGTAGACGAAGTGGTTGGATAGATCCATTTCTTGAGGGATTGTGCAAGTATCTGTCTTTCTCGAAATTAAAAGTGAAGGCAGATTTGAAGCAAGGGGATCTTTTAAATACTTCAAATCTAGTATGCTCACTTAGTTTTGATCGTGATGGAGAATTTTTTGCTACAGCCGGTGTTAATAAGAAAATCAAAGTATTTGAATGTGACACAATAACAAATGAGGATCGTGATATCCACTATCCCGTGGTTGAAATGGCTAGCAGGTCAAAGCTAAGCAGTATATGTTGGAATAGTTATATCAAAAGCCAGATTGCTTCAAGTAACTTTGAAGGTGTTGTGCAGGTATGGGATGTCACAAGAAGTCAATTGTTTACGGAGATGAGAGAACATGAAAGGCGTGTATGGTCCATTGATTTTTCATCAGCAGACCCAACAATGTTGGCCAGCGGGAGTGATGATGGTTGTGTAAAGCTATGGAGTATCAATCAGGGAGTAAGTATTGGTACAATTAAAACAAAGGCGAATGTCTGCTGCGTACAGTTTCCATTGGACTCTAGTCGTTCCCTTGCCTTTGGTTCAGCGGATCATATAATTTACTACTATGATCTTCGTAACTCAAAGGTTCCTCTGTGCACATTGATCGGACACAGCAAAACCGTGAGTTATGTCAAATTTGTAGATGGGACAAATCTCGTTTCTGCGTCCACTGACAATACAGTGAAGCTTTGGGATTTGTCAATGTCCTCATCTCGGGTCATTGACACTCCAGTTCTATCATTCACCGGCCACACGAATGTGAAGAACTTTGTGGGGTTGTCAGTTTCTGATGGTTACATTGCTACAGGCTCGGAGACTAATGAGGTTTTCATCTACCACAAGGCTTTTCCAATGCCGGCATTGTCATACAAGTTTCAGAGCACAGACCCACTTTCCGGCCATGACACAGATGATGCTGCACAGTTTATCTCTTCTCTTTGTTGGCGAGGCCAAACCTCCACCTTAATTGCTGCAAATTCGACCGGGAATATCAAAATTTTGGAGATGGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009637 GO:0031461 GO:0032991 GO:0042802 GO:0044424 GO:0044464 GO:0050896 GO:0080008 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko04115 ko04120 ko04712 map04115 map04120 map04712

Pfam Domains

Protein Families

Pkinase WD40

Protein Analysis

900

Amino Acids

101.08

Weight (kDa)

5.68

Isoelectric Point (pI)

57.13

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000964)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53090 AT1G53090 AT1G53090 AT1G53090 AT1G53090 AT3G15354 AT3G15354 AT3G15354 AT3G15354 AT3G15354
fragaria_vesca	FvH4_3g19920 FvH4_3g19920 FvH4_3g19920 FvH4_3g19920 FvH4_3g19920 FvH4_3g19920 FvH4_3g19920 FvH4_3g19920 FvH4_3g19920 FvH4_3g19920 FvH4_3g19920 FvH4_3g19920 FvH4_3g19920 FvH4_3g19920 FvH4_3g19920 FvH4_3g19920 FvH4_3g19920 FvH4_3g19920 FvH4_3g19920
malus_domestica	MD03G1228100.v1.1 MD11G1247500.v1.1
prunus_persica	Prupe.4G180900_v2.0.a1 Prupe.4G180900_v2.0.a1 Prupe.4G180900_v2.0.a1 Prupe.4G180900_v2.0.a1 Prupe.4G180900_v2.0.a1 Prupe.4G180900_v2.0.a1 Prupe.4G180900_v2.0.a1 Prupe.4G180900_v2.0.a1 Prupe.4G180900_v2.0.a1 Prupe.4G180900_v2.0.a1 Prupe.4G180900_v2.0.a1 Prupe.4G180900_v2.0.a1 Prupe.4G180900_v2.0.a1 Prupe.4G180900_v2.0.a1 Prupe.4G180900_v2.0.a1 Prupe.4G180900_v2.0.a1 Prupe.4G180900_v2.0.a1
pyrus_communis	pycom03g17550 pycom11g22000
rosa_chinensis	RchiOBHm_Chr5g0033591
rosa_laevigata	RLG00000033491
rosa_roxburghii	Rroxscaffold_1G00046490
rosa_rugosa	Rorug05G0140300 Rorug05G0140400 Rorug05G0140500 Rorug05G0140600 Rorug05G0140700
rosa_samantha	Rh5AG232000 Rh5BG232700 Rh5CG261600 Rh5DG238300
rosa_wichuraiana	Rw5G021170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	287
Acc36I	ACCTGC	2 cut(s)	1902, 1981
AccI	GTMKAC	2 cut(s)	815, 1657
AccII	CGCG	1 cut(s)	155
AciI	CCGC	6 cut(s)	34, 275, 1112, 1520, 2097, 2231
AclWI	GGATC	6 cut(s)	351, 850, 1670, 1758, 1881, 2241
AcoI	YGGCCR	4 cut(s)	1040, 2091, 2434, 2584
AcsI	RAATTY	8 cut(s)	73, 625, 1070, 1160, 1805, 2321, 2662, 2682
AcuI	CTGAAG	2 cut(s)	573, 843
AdeI	CACNNNGTG	1 cut(s)	439
AfaI	GTAC	3 cut(s)	714, 2155, 2187
AfiI	CCNNNNNNNGG	4 cut(s)	1300, 1383, 2400, 2582
AhlI	ACTAGT	1 cut(s)	818
AjnI	CCWGG	2 cut(s)	237, 1393
AjuI	GAANNNNNNNTTGG	2 cut(s)	1576, 1608
AleI	CACNNNNGTG	1 cut(s)	2444
AluBI	AGCT	9 cut(s)	296, 318, 912, 1123, 1513, 1562, 1921, 2122, 2374
AluI	AGCT	9 cut(s)	296, 318, 912, 1123, 1513, 1562, 1921, 2122, 2374
Alw21I	GWGCWC	2 cut(s)	2285, 2570
Alw26I	GTCTC	6 cut(s)	115, 732, 760, 797, 943, 2495
Alw44I	GTGCAC	1 cut(s)	2281
AlwI	GGATC	6 cut(s)	351, 850, 1670, 1758, 1881, 2241
AlwNI	CAGNNNCTG	1 cut(s)	2474
Ama87I	CYCGRG	3 cut(s)	527, 1477, 2400
AoxI	GGCC	7 cut(s)	986, 1040, 1544, 2091, 2434, 2584, 2635
ApaLI	GTGCAC	1 cut(s)	2281
ApeKI	GCWGC	7 cut(s)	24, 695, 976, 1168, 2181, 2603, 2657
ApoI	RAATTY	8 cut(s)	73, 625, 1070, 1160, 1805, 2321, 2662, 2682
ArsI	GACNNNNNNTTYG	2 cut(s)	641, 673
Asp700I	GAANNNNTTC	1 cut(s)	627
AspA2I	CCTAGG	1 cut(s)	125
AspLEI	GCGC	1 cut(s)	155
AspS9I	GGNCC	3 cut(s)	1374, 1386, 2055
AsuC2I	CCSGG	2 cut(s)	253, 2671
AsuHPI	GGTGA	5 cut(s)	173, 320, 1315, 1572, 2422
AsuNHI	GCTAGC	1 cut(s)	1907
AvaI	CYCGRG	3 cut(s)	527, 1477, 2400
AvaII	GGWCC	3 cut(s)	1374, 1386, 2055
AvrII	CCTAGG	1 cut(s)	125
BaeGI	GKGCMC	1 cut(s)	2285
BalI	TGGCCA	1 cut(s)	2093
BbsI	GAAGAC	1 cut(s)	1454
Bbv12I	GWGCWC	2 cut(s)	2285, 2570
BbvCI	CCTCAGC	1 cut(s)	908
BbvI	GCAGC	7 cut(s)	11, 707, 963, 1155, 2168, 2590, 2644
BccI	CCATC	7 cut(s)	1433, 1533, 1793, 2102, 2324, 2471, 2686
BcgI	CGANNNNNNTGC	8 cut(s)	486, 520, 655, 687, 689, 721, 2272, 2306
BciT130I	CCWGG	2 cut(s)	239, 1395
BciVI	GTATCC	1 cut(s)	1447
BcnI	CCSGG	2 cut(s)	253, 2671
BcoDI	GTCTC	6 cut(s)	115, 732, 760, 797, 943, 2495
BcuI	ACTAGT	1 cut(s)	818
BfmI	CTRYAG	4 cut(s)	28, 1197, 1815, 2490
BfuAI	ACCTGC	2 cut(s)	1902, 1981
BfuI	GTATCC	1 cut(s)	1447
BisI	GCNGC	9 cut(s)	25, 696, 977, 1113, 1169, 1521, 2182, 2604, 2658
BlnI	CCTAGG	1 cut(s)	125
BlpI	GCTNAGC	1 cut(s)	1922
BlsI	GCNGC	9 cut(s)	26, 697, 978, 1114, 1170, 1522, 2183, 2605, 2659
Bme1390I	CCNGG	4 cut(s)	239, 253, 1395, 2671
Bme18I	GGWCC	3 cut(s)	1374, 1386, 2055
BmeT110I	CYCGRG	3 cut(s)	527, 1477, 2400
BmgT120I	GGNCC	3 cut(s)	1374, 1386, 2055
BmiI	GGNNCC	2 cut(s)	1375, 2274
BmrFI	CCNGG	4 cut(s)	239, 253, 1395, 2671
BmsI	GCATC	5 cut(s)	506, 592, 604, 1407, 2590
BmtI	GCTAGC	1 cut(s)	1911
BoxI	GACNNNNGTC	1 cut(s)	2205
BpiI	GAAGAC	1 cut(s)	1454
BpmI	CTGGAG	1 cut(s)	2400
Bpu10I	CCTNAGC	2 cut(s)	908, 1026
Bpu1102I	GCTNAGC	1 cut(s)	1922
BpuEI	CTTGAG	4 cut(s)	340, 898, 1309, 1706
BpuMI	CCSGG	2 cut(s)	253, 2671
Bsa29I	ATCGAT	1 cut(s)	346
BsaI	GGTCTC	2 cut(s)	732, 797
BsaJI	CCNNGG	5 cut(s)	125, 238, 252, 528, 1893
BsaWI	WCCGGW	1 cut(s)	340
BsaXI	ACNNNNNCTCC	4 cut(s)	464, 494, 508, 538
Bsc4I	CCNNNNNNNGG	4 cut(s)	1300, 1383, 2400, 2582
Bse118I	RCCGGY	5 cut(s)	1038, 1567, 1820, 2432, 2542
Bse1I	ACTGG	4 cut(s)	122, 807, 1305, 2417
Bse3DI	GCAATG	1 cut(s)	2484
BseBI	CCWGG	2 cut(s)	239, 1395
BseCI	ATCGAT	1 cut(s)	346
BseDI	CCNNGG	5 cut(s)	125, 238, 252, 528, 1893
BseGI	GGATG	5 cut(s)	53, 271, 538, 1444, 2005
BseLI	CCNNNNNNNGG	4 cut(s)	1300, 1383, 2400, 2582
BseMI	GCAATG	1 cut(s)	2484
BseMII	CTCAG	3 cut(s)	922, 938, 1017
BseNI	ACTGG	4 cut(s)	122, 807, 1305, 2417
BseRI	GAGGAG	2 cut(s)	957, 1154
BseSI	GKGCMC	1 cut(s)	2285
BseXI	GCAGC	7 cut(s)	11, 707, 963, 1155, 2168, 2590, 2644
BseYI	CCCAGC	1 cut(s)	65
BsgI	GTGCAG	3 cut(s)	1004, 2009, 2589
Bsh1236I	CGCG	1 cut(s)	155
Bsh1285I	CGRYCG	1 cut(s)	2670
BshFI	GGCC	7 cut(s)	988, 1042, 1546, 2093, 2436, 2586, 2637
BshVI	ATCGAT	1 cut(s)	346
BsiEI	CGRYCG	1 cut(s)	2670
BsiHKAI	GWGCWC	2 cut(s)	2285, 2570
BsiHKCI	CYCGRG	3 cut(s)	527, 1477, 2400
BsiSI	CCGG	9 cut(s)	252, 341, 1039, 1568, 1821, 2433, 2543, 2583, 2670
BslFI	GGGAC	3 cut(s)	807, 888, 2347
BslI	CCNNNNNNNGG	4 cut(s)	1300, 1383, 2400, 2582
BsmAI	GTCTC	6 cut(s)	115, 732, 760, 797, 943, 2495
BsmFI	GGGAC	3 cut(s)	807, 888, 2347
BsmI	GAATGC	1 cut(s)	371
BsnI	GGCC	7 cut(s)	988, 1042, 1546, 2093, 2436, 2586, 2637
Bso31I	GGTCTC	2 cut(s)	732, 797
BsoBI	CYCGRG	3 cut(s)	527, 1477, 2400
Bsp1286I	GDGCHC	2 cut(s)	2285, 2570
Bsp1720I	GCTNAGC	1 cut(s)	1922
BspACI	CCGC	6 cut(s)	34, 275, 1112, 1520, 2097, 2231
BspANI	GGCC	7 cut(s)	988, 1042, 1546, 2093, 2436, 2586, 2637
BspCNI	CTCAG	3 cut(s)	921, 939, 1018
BspDI	ATCGAT	1 cut(s)	346
BspFNI	CGCG	1 cut(s)	155
BspLI	GGNNCC	2 cut(s)	1375, 2274
BspMAI	CTGCAG	1 cut(s)	1201
BspMI	ACCTGC	2 cut(s)	1902, 1981
BspOI	GCTAGC	1 cut(s)	1911
BspPI	GGATC	6 cut(s)	351, 850, 1670, 1758, 1881, 2241
BspTNI	GGTCTC	2 cut(s)	732, 797
BsrDI	GCAATG	1 cut(s)	2484
BsrFI	RCCGGY	5 cut(s)	1038, 1567, 1820, 2432, 2542
BsrI	ACTGG	4 cut(s)	122, 807, 1305, 2417
BssAI	RCCGGY	5 cut(s)	1038, 1567, 1820, 2432, 2542
BssECI	CCNNGG	5 cut(s)	125, 238, 252, 528, 1893
BssNAI	GTATAC	1 cut(s)	816
BssT1I	CCWWGG	1 cut(s)	125
Bst1107I	GTATAC	1 cut(s)	816
Bst2UI	CCWGG	2 cut(s)	239, 1395
Bst4CI	ACNGT	5 cut(s)	284, 2190, 2308, 2368, 2610
Bst6I	CTCTTC	3 cut(s)	613, 822, 2623
BstC8I	GCNNGC	6 cut(s)	371, 674, 1040, 1909, 2095, 2544
BstDEI	CTNAG	8 cut(s)	613, 908, 947, 1026, 1124, 1272, 1784, 1922
BstDSI	CCRYGG	1 cut(s)	1893
BstF5I	GGATG	5 cut(s)	53, 271, 538, 1444, 2005
BstFNI	CGCG	1 cut(s)	155
BstHHI	GCGC	1 cut(s)	155
BstMAI	GTCTC	6 cut(s)	115, 732, 760, 797, 943, 2495
BstMCI	CGRYCG	1 cut(s)	2670
BstMWI	GCNNNNNNNGC	4 cut(s)	985, 1027, 1552, 1568
BstNI	CCWGG	2 cut(s)	239, 1395
BstNSI	RCATGY	2 cut(s)	377, 676
BstPAI	GACNNNNGTC	1 cut(s)	2205
BstSCI	CCNGG	4 cut(s)	237, 251, 1393, 2669
BstSFI	CTRYAG	4 cut(s)	28, 1197, 1815, 2490
BstSLI	GKGCMC	1 cut(s)	2285
BstUI	CGCG	1 cut(s)	155
BstV1I	GCAGC	7 cut(s)	11, 707, 963, 1155, 2168, 2590, 2644
BstV2I	GAAGAC	1 cut(s)	1454
BstX2I	RGATCY	2 cut(s)	1675, 1750
BstXI	CCANNNNNNTGG	1 cut(s)	1401
BstYI	RGATCY	2 cut(s)	1675, 1750
BstZ17I	GTATAC	1 cut(s)	816
Bsu15I	ATCGAT	1 cut(s)	346
BsuI	GTATCC	1 cut(s)	1447
BsuRI	GGCC	7 cut(s)	988, 1042, 1546, 2093, 2436, 2586, 2637
BsuTUI	ATCGAT	1 cut(s)	346
BtgI	CCRYGG	1 cut(s)	1893
BtgZI	GCGATG	1 cut(s)	1440
BtsCI	GGATG	5 cut(s)	53, 271, 538, 1444, 2005
BtsI	GCAGTG	1 cut(s)	332
BtsIMutI	CAGTG	5 cut(s)	219, 332, 516, 2355, 2373
BveI	ACCTGC	2 cut(s)	1902, 1981
Cac8I	GCNNGC	6 cut(s)	371, 674, 1040, 1909, 2095, 2544
CaiI	CAGNNNCTG	1 cut(s)	2474
CfoI	GCGC	1 cut(s)	155
Cfr10I	RCCGGY	5 cut(s)	1038, 1567, 1820, 2432, 2542
Cfr13I	GGNCC	3 cut(s)	1374, 1386, 2055
ClaI	ATCGAT	1 cut(s)	346
CseI	GACGC	1 cut(s)	2340
Csp6I	GTAC	3 cut(s)	713, 2154, 2186
CspCI	CAANNNNNGTGG	2 cut(s)	2635, 2670
CviAII	CATG	8 cut(s)	21, 374, 450, 460, 673, 852, 2039, 2588
CviQI	GTAC	3 cut(s)	713, 2154, 2186
DdeI	CTNAG	8 cut(s)	613, 908, 947, 1026, 1124, 1272, 1784, 1922
DraI	TTTAAA	2 cut(s)	1507, 1758
DraIII	CACNNNGTG	1 cut(s)	439
DrdI	GACNNNNNNGTC	1 cut(s)	287
DseDI	GACNNNNNNGTC	1 cut(s)	287
EaeI	YGGCCR	4 cut(s)	1040, 2091, 2434, 2584
Eam1104I	CTCTTC	3 cut(s)	613, 822, 2623
EarI	CTCTTC	3 cut(s)	613, 822, 2623
EciI	GGCGGA	1 cut(s)	49
Eco130I	CCWWGG	1 cut(s)	125
Eco147I	AGGCCT	1 cut(s)	1546
Eco31I	GGTCTC	2 cut(s)	732, 797
Eco32I	GATATC	1 cut(s)	1882
Eco47I	GGWCC	3 cut(s)	1374, 1386, 2055
Eco57I	CTGAAG	2 cut(s)	573, 843
Eco88I	CYCGRG	3 cut(s)	527, 1477, 2400
EcoRI	GAATTC	3 cut(s)	73, 1070, 1160
EcoRII	CCWGG	2 cut(s)	237, 1393
EcoRV	GATATC	1 cut(s)	1882
EcoT14I	CCWWGG	1 cut(s)	125
ErhI	CCWWGG	1 cut(s)	125
FaeI	CATG	8 cut(s)	24, 377, 453, 463, 676, 855, 2042, 2591
FalI	AAGNNNNNCTT	2 cut(s)	1737, 1769
FaqI	GGGAC	3 cut(s)	807, 888, 2347
FatI	CATG	8 cut(s)	20, 373, 449, 459, 672, 851, 2038, 2587
FauI	CCCGC	1 cut(s)	2090
FblI	GTMKAC	2 cut(s)	815, 1657
Fnu4HI	GCNGC	9 cut(s)	25, 696, 977, 1113, 1169, 1521, 2182, 2604, 2658
FokI	GGATG	5 cut(s)	40, 278, 545, 1451, 2012
Fsp4HI	GCNGC	9 cut(s)	25, 696, 977, 1113, 1169, 1521, 2182, 2604, 2658
GlaI	GCGC	1 cut(s)	154
GluI	GCNGC	9 cut(s)	25, 696, 977, 1113, 1169, 1521, 2182, 2604, 2658
GsaI	CCCAGC	1 cut(s)	69
GsuI	CTGGAG	1 cut(s)	2400
HaeIII	GGCC	7 cut(s)	988, 1042, 1546, 2093, 2436, 2586, 2637
HapII	CCGG	9 cut(s)	252, 341, 1039, 1568, 1821, 2433, 2543, 2583, 2670
HgaI	GACGC	1 cut(s)	2340
HhaI	GCGC	1 cut(s)	155
Hin1II	CATG	8 cut(s)	24, 377, 453, 463, 676, 855, 2042, 2591
Hin6I	GCGC	1 cut(s)	153
HinP1I	GCGC	1 cut(s)	153
HincII	GTYRAC	1 cut(s)	280
HindII	GTYRAC	1 cut(s)	280
HindIII	AAGCTT	1 cut(s)	2372
HpaII	CCGG	9 cut(s)	252, 341, 1039, 1568, 1821, 2433, 2543, 2583, 2670
HphI	GGTGA	5 cut(s)	173, 320, 1315, 1572, 2422
Hpy166II	GTNNAC	8 cut(s)	280, 433, 816, 1408, 1658, 2022, 2283, 2355
Hpy8I	GTNNAC	8 cut(s)	280, 433, 816, 1408, 1658, 2022, 2283, 2355
Hpy99I	CGWCG	1 cut(s)	138
HpyAV	CCTTC	7 cut(s)	41, 138, 456, 600, 1300, 1723, 1973
HpyCH4III	ACNGT	5 cut(s)	284, 2190, 2308, 2368, 2610
HpyCH4IV	ACGT	2 cut(s)	1105, 1413
HpyF10VI	GCNNNNNNNGC	4 cut(s)	985, 1027, 1552, 1568
HpyF3I	CTNAG	8 cut(s)	613, 908, 947, 1026, 1124, 1272, 1784, 1922
HpySE526I	ACGT	2 cut(s)	1105, 1413
Hsp92II	CATG	8 cut(s)	24, 377, 453, 463, 676, 855, 2042, 2591
HspAI	GCGC	1 cut(s)	153
KroI	GCCGGC	2 cut(s)	1038, 2542
KroNI	GCCGGC	2 cut(s)	1040, 2544
LmnI	GCTCC	1 cut(s)	1141
Lsp1109I	GCAGC	7 cut(s)	11, 707, 963, 1155, 2168, 2590, 2644
LweI	GCATC	5 cut(s)	506, 592, 604, 1407, 2590
MaeII	ACGT	2 cut(s)	1105, 1413
MaeIII	GTNAC	6 cut(s)	1600, 1853, 1970, 2002, 2261, 2480
MfeI	CAATTG	2 cut(s)	971, 2015
MflI	RGATCY	2 cut(s)	1675, 1750
MhlI	GDGCHC	2 cut(s)	2285, 2570
MlsI	TGGCCA	1 cut(s)	2093
MluNI	TGGCCA	1 cut(s)	2093
MlyI	GAGTC	4 cut(s)	68, 117, 500, 2195
MmeI	TCCRAC	4 cut(s)	312, 639, 1649, 1916
Mox20I	TGGCCA	1 cut(s)	2093
MroNI	GCCGGC	2 cut(s)	1038, 2542
MroXI	GAANNNNTTC	1 cut(s)	627
MscI	TGGCCA	1 cut(s)	2093
MseI	TTAA	9 cut(s)	539, 561, 1506, 1532, 1721, 1757, 1827, 2160, 2651
MslI	CAYNNNNRTG	3 cut(s)	222, 2442, 2444
Msp20I	TGGCCA	1 cut(s)	2093
MspA1I	CMGCKG	2 cut(s)	2097, 2231
MspI	CCGG	9 cut(s)	252, 341, 1039, 1568, 1821, 2433, 2543, 2583, 2670
MspR9I	CCNGG	4 cut(s)	239, 253, 1395, 2671
MunI	CAATTG	2 cut(s)	971, 2015
Mva1269I	GAATGC	1 cut(s)	371
MvaI	CCWGG	2 cut(s)	239, 1395
MvnI	CGCG	1 cut(s)	155
MwoI	GCNNNNNNNGC	4 cut(s)	985, 1027, 1552, 1568
NaeI	GCCGGC	2 cut(s)	1040, 2544
NciI	CCSGG	2 cut(s)	253, 2671
NgoMIV	GCCGGC	2 cut(s)	1038, 2542
NheI	GCTAGC	1 cut(s)	1907
NlaIII	CATG	8 cut(s)	24, 377, 453, 463, 676, 855, 2042, 2591
NlaIV	GGNNCC	2 cut(s)	1375, 2274
NmuCI	GTSAC	2 cut(s)	1853, 2002
NspI	RCATGY	2 cut(s)	377, 676
OliI	CACNNNNGTG	1 cut(s)	2444
PaeI	GCATGC	1 cut(s)	676
PaeR7I	CTCGAG	1 cut(s)	1477
PceI	AGGCCT	1 cut(s)	1546
PctI	GAATGC	1 cut(s)	371
PdiI	GCCGGC	2 cut(s)	1040, 2544
PdmI	GAANNNNTTC	1 cut(s)	627
PfeI	GAWTC	9 cut(s)	121, 176, 509, 521, 704, 732, 1193, 1316, 1361
PkrI	GCNGC	9 cut(s)	26, 697, 978, 1114, 1170, 1522, 2183, 2605, 2659
PleI	GAGTC	4 cut(s)	67, 116, 499, 2195
PpsI	GAGTC	4 cut(s)	67, 116, 499, 2195
PshAI	GACNNNNGTC	1 cut(s)	2205
Psp6I	CCWGG	2 cut(s)	237, 1393
PspFI	CCCAGC	1 cut(s)	65
PspGI	CCWGG	2 cut(s)	237, 1393
PspN4I	GGNNCC	2 cut(s)	1375, 2274
PspPI	GGNCC	3 cut(s)	1374, 1386, 2055
PstI	CTGCAG	1 cut(s)	1201
PstNI	CAGNNNCTG	1 cut(s)	2474
PsuI	RGATCY	2 cut(s)	1675, 1750
RsaI	GTAC	3 cut(s)	714, 2155, 2187
RsaNI	GTAC	3 cut(s)	713, 2154, 2186
RseI	CAYNNNNRTG	3 cut(s)	222, 2442, 2444
SaqAI	TTAA	9 cut(s)	539, 561, 1506, 1532, 1721, 1757, 1827, 2160, 2651
SatI	GCNGC	9 cut(s)	25, 696, 977, 1113, 1169, 1521, 2182, 2604, 2658
Sau96I	GGNCC	3 cut(s)	1374, 1386, 2055
SchI	GAGTC	4 cut(s)	68, 117, 500, 2195
ScrFI	CCNGG	4 cut(s)	239, 253, 1395, 2671
SduI	GDGCHC	2 cut(s)	2285, 2570
SfaNI	GCATC	5 cut(s)	506, 592, 604, 1407, 2590
SfcI	CTRYAG	4 cut(s)	28, 1197, 1815, 2490
Sfr274I	CTCGAG	1 cut(s)	1477
SinI	GGWCC	3 cut(s)	1374, 1386, 2055
SlaI	CTCGAG	1 cut(s)	1477
SmiMI	CAYNNNNRTG	3 cut(s)	222, 2442, 2444
SmlI	CTYRAG	5 cut(s)	319, 913, 1324, 1477, 1685
SmoI	CTYRAG	5 cut(s)	319, 913, 1324, 1477, 1685
SpeI	ACTAGT	1 cut(s)	818
SphI	GCATGC	1 cut(s)	676
SseBI	AGGCCT	1 cut(s)	1546
SsiI	CCGC	6 cut(s)	34, 275, 1112, 1520, 2097, 2231
StuI	AGGCCT	1 cut(s)	1546
StyD4I	CCNGG	4 cut(s)	237, 251, 1393, 2669
StyI	CCWWGG	1 cut(s)	125
TaaI	ACNGT	5 cut(s)	284, 2190, 2308, 2368, 2610
TaiI	ACGT	2 cut(s)	1108, 1416
TaqI	TCGA	8 cut(s)	346, 489, 845, 955, 1319, 1478, 1715, 2666
TaqII	GACCGA	1 cut(s)	756
TauI	GCSGC	2 cut(s)	1115, 1523
TfiI	GAWTC	9 cut(s)	121, 176, 509, 521, 704, 732, 1193, 1316, 1361
Tru1I	TTAA	9 cut(s)	539, 561, 1506, 1532, 1721, 1757, 1827, 2160, 2651
Tru9I	TTAA	9 cut(s)	539, 561, 1506, 1532, 1721, 1757, 1827, 2160, 2651
TscAI	CASTG	5 cut(s)	226, 332, 523, 2362, 2373
TseFI	GTSAC	2 cut(s)	1853, 2002
TseI	GCWGC	7 cut(s)	24, 695, 976, 1168, 2181, 2603, 2657
Tsp45I	GTSAC	2 cut(s)	1853, 2002
TspGWI	ACGGA	2 cut(s)	1466, 2039
TspRI	CASTG	5 cut(s)	226, 332, 523, 2362, 2373
VneI	GTGCAC	1 cut(s)	2281
VpaK11BI	GGWCC	3 cut(s)	1374, 1386, 2055
XapI	RAATTY	8 cut(s)	73, 625, 1070, 1160, 1805, 2321, 2662, 2682
XbaI	TCTAGA	2 cut(s)	86, 1487
XceI	RCATGY	2 cut(s)	377, 676
XhoI	CTCGAG	1 cut(s)	1477
XmaJI	CCTAGG	1 cut(s)	125
XmiI	GTMKAC	2 cut(s)	815, 1657
XmnI	GAANNNNTTC	1 cut(s)	627

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.