Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0000964

Physical Location & Seq

Genomic Coordinates Forward (+)

18676653 .. 18679746

Gene Structure 3094 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom03g17550.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2229 bp

ATGGAAGGCTCATCTGAGTCTGCTTGGCAGAATTCTGATAGTTCTAGAGGATTGAATACTTCCAGAGTTTCAAACCGGAATCCAAGGCTTCATCGTGCTGGAAGGTTTGGCTTGTCGGGTGAGGCATCTCAGGATTCGGACTTAAGAAAGGATAGAGATAGAGTTGTGGTGGCACACAATGATGACCTTACAAACCAGGGTGGGTTATCAGGGGTTTGTGAGGATGAGGTGGCGGTTGACCGTTTTGTTGGAGCTATTGAATGGGGTGATGTTAGCTTGAGGCAGTGGTTGGATAAACCGGATCGATCTTTTGATGTATTTGAATGCTTGCATATATTTAGGCAAATAGTGGAAATTGTTAATGCAGCACATTCCCAAGGGATTGTTGCTCATAATGTGCGACCTTCATGTTTCGTTATGTCATCTTTCAACCACGTCTCCTTTATCGAGTCTGCCTCTTGTTCGGATTCTGGCACTGATTCTCCCGAGGATGGGTTAAACAGCCCAACTGAAGAAATTAAGGATTTTCGCTCTCTCTTGTATCGTAATTTGCATCGGCAACGAAGGAACTTAGGAAGAGAAAATTTTCAGTCTATGACAACTCCAAATGCCTTGTCGGAAATGAGTTGCATGCAGTCAAGTTCAATCTATGCAGCACGTGAATCATTGGTACAAGAGAGTGAAAATAGAATCAGAGACCGAAATGTTGAACTAGAAGATAAGAGACAACCATTTCCAATGAAACAGATATTGCTTATGGAGACCAGTTGGTATACTAGTCCCGAAGAGGTTTATGGTGATCGATCAAGTTCATGTGCTTCAGACATTTACCGATTAGGGGTTCTTCTTTTTGAGTTATTCTGTCCATTCAGCTCAAGAGAAGAAAAAAGCAGGACAATGTCTAGTCTGAGACATCGAGTTCTTCCTCCTCAATTGCTGCTGAAATGGCCGAAAGTGGCTTCATTTTGTTTATGTCTACTGCACCCTGACCCAAATAGCCGGCTAAAAATGGGTGAGTTGCAACAAAGTGAGCTTCTGTATGAACCACGAGATGATTTAGAAGAACGCGAAGCAGCAATAGAGCTTAGAGAGAAAATAGAGGAGCAGGAATTATTACTGGAATTCCTGTTGCTTATGCAACAAAGGAAACAGGAATTTGCAGATAAGTTGCAAAATACTCTTTCGTTTCTGTGTTCTGATATTGATGAAGTTATGAAGCACCAAATAACTTCTAAGAAAAAGAGCAGTTCAATCCCACAACTGGTGAAGGAAGATGATTCAACATCAAGTTTCCCGTCTATGAATATTTTTGATGATGATGATTCTGCTAGTGGGTCCAGAAAAAGATCCAGACCAGGCATCCGGATTCACAATGTAGAGGAAAGCGATGATAATTTGGAAGGTCAGAAGACGGATGCTGAAAATAAAGAAGGTGTTCTCTTGAGAAGTTCTAGATTGATGAAGAACTTTAAAAAGCTAGAGGCGGCATATTTTTTAACGAGATGGAGGCCTGTAAAGCAGTCAAACAAACCGGCTAAACATTCACCAATAAGTAGTTCTGTTGTAACTGAAAGAAGTTCTGTCAATAATTTGCAATCCAAAGAACAACAGAGTGAAGGTAGACGAAGTGGTTGGATCGATCCATTTCTTGAGGGGTTGTGCAAGTATCTGTCTTTCTCTAAATTAAAAGTCAAGGCAGATTTGAAGCAAGGGGATCTTTTAAATGCTTCAAATCTAGTATGCTCACTTAGTTTTGATCGTGATGGAGAATTTTTTGCTACAGCCGGTGTTAATAAGAAAATTAAAGTATTTGAATGTGACACAATAATAAATGAGGATCGCGATATCCACTATCCCGTGGTTGAAATGGCTAGCAGATCAAGGCTAAGCAGTATATGTTGGAATAGTTATATTAAAAGCCAGATTGCTTCAAGTAACTTTGAAGGTGTGGTGCAGGTATGGGATGTTACAAGAAGTCAAGTTCTTACGGAGATGAGAGAACATGAAAGGCGTGTATGGTCCATTGACTTTTCATCAGCAGACCCAACAATGTTGGCCAGCGGGAGCGATGATGGTTCTGTAAAGCTATGGAGTATCAATCAGGGTGTAAGTATTGGTACAATTAAAACAAAGGCGAATGTCTGCTGTGTACAGTTTCCATTGGACTCTAGTCGTTACCTTGCCTTTGGTTCAGCGGATCATAAAATTTACTACTATCGATCTTCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009637 GO:0031461 GO:0032991 GO:0042802 GO:0044424 GO:0044464 GO:0050896 GO:0080008 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko04115 ko04120 ko04712 map04115 map04120 map04712

Pfam Domains

Protein Families

Pkinase WD40

Protein Analysis

743

Amino Acids

84.39

Weight (kDa)

5.82

Isoelectric Point (pI)

64.15

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000964)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53090 AT1G53090 AT1G53090 AT1G53090 AT1G53090 AT3G15354 AT3G15354 AT3G15354 AT3G15354 AT3G15354
fragaria_vesca	FvH4_3g19920 FvH4_3g19920 FvH4_3g19920 FvH4_3g19920 FvH4_3g19920 FvH4_3g19920 FvH4_3g19920 FvH4_3g19920 FvH4_3g19920 FvH4_3g19920 FvH4_3g19920 FvH4_3g19920 FvH4_3g19920 FvH4_3g19920 FvH4_3g19920 FvH4_3g19920 FvH4_3g19920 FvH4_3g19920 FvH4_3g19920
malus_domestica	MD03G1228100.v1.1 MD11G1247500.v1.1
prunus_persica	Prupe.4G180900_v2.0.a1 Prupe.4G180900_v2.0.a1 Prupe.4G180900_v2.0.a1 Prupe.4G180900_v2.0.a1 Prupe.4G180900_v2.0.a1 Prupe.4G180900_v2.0.a1 Prupe.4G180900_v2.0.a1 Prupe.4G180900_v2.0.a1 Prupe.4G180900_v2.0.a1 Prupe.4G180900_v2.0.a1 Prupe.4G180900_v2.0.a1 Prupe.4G180900_v2.0.a1 Prupe.4G180900_v2.0.a1 Prupe.4G180900_v2.0.a1 Prupe.4G180900_v2.0.a1 Prupe.4G180900_v2.0.a1 Prupe.4G180900_v2.0.a1
pyrus_communis	pycom03g17550 pycom11g22000
rosa_chinensis	RchiOBHm_Chr5g0033591
rosa_laevigata	RLG00000033491
rosa_roxburghii	Rroxscaffold_1G00046490
rosa_rugosa	Rorug05G0140300 Rorug05G0140400 Rorug05G0140500 Rorug05G0140600 Rorug05G0140700
rosa_samantha	Rh5AG232000 Rh5BG232700 Rh5CG261600 Rh5DG238300
rosa_wichuraiana	Rw5G021170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1945
AccI	GTMKAC	3 cut(s)	773, 976, 1621
AccII	CGCG	2 cut(s)	1068, 1842
AccIII	TCCGGA	1 cut(s)	1362
AciI	CCGC	4 cut(s)	233, 1484, 2061, 2195
AclWI	GGATC	7 cut(s)	309, 1341, 1634, 1643, 1722, 1845, 2205
AcoI	YGGCCR	2 cut(s)	947, 2055
AcsI	RAATTY	6 cut(s)	31, 583, 1121, 1154, 1769, 2205
AcuI	CTGAAG	2 cut(s)	531, 804
AcvI	CACGTG	1 cut(s)	659
AfaI	GTAC	3 cut(s)	672, 2119, 2151
AfiI	CCNNNNNNNGG	4 cut(s)	491, 492, 838, 1261
AflII	CTTAAG	1 cut(s)	142
AhlI	ACTAGT	1 cut(s)	776
AjiI	CACGTC	1 cut(s)	436
AjnI	CCWGG	2 cut(s)	195, 1354
AjuI	GAANNNNNNNTTGG	2 cut(s)	1540, 1572
AluBI	AGCT	7 cut(s)	254, 276, 873, 1033, 1084, 1477, 2086
AluI	AGCT	7 cut(s)	254, 276, 873, 1033, 1084, 1477, 2086
Alw26I	GTCTC	5 cut(s)	442, 690, 718, 755, 904
AlwI	GGATC	7 cut(s)	309, 1341, 1634, 1643, 1722, 1845, 2205
Ama87I	CYCGRG	1 cut(s)	485
Aor13HI	TCCGGA	1 cut(s)	1362
AoxI	GGCC	3 cut(s)	947, 1508, 2055
ApeKI	GCWGC	4 cut(s)	365, 653, 937, 1073
ApoI	RAATTY	6 cut(s)	31, 583, 1121, 1154, 1769, 2205
ArsI	GACNNNNNNTTYG	2 cut(s)	599, 631
Asp700I	GAANNNNTTC	2 cut(s)	585, 1434
AspS9I	GGNCC	2 cut(s)	1335, 2019
AsuHPI	GGTGA	6 cut(s)	131, 278, 809, 1025, 1276, 1536
AsuNHI	GCTAGC	1 cut(s)	1871
AvaI	CYCGRG	1 cut(s)	485
AvaII	GGWCC	2 cut(s)	1335, 2019
BalI	TGGCCA	1 cut(s)	2057
BauI	CACGAG	1 cut(s)	1047
BbrPI	CACGTG	1 cut(s)	659
BbsI	GAAGAC	1 cut(s)	1415
BbvI	GCAGC	4 cut(s)	377, 665, 924, 1085
BccI	CCATC	4 cut(s)	485, 1497, 1757, 2066
BciT130I	CCWGG	2 cut(s)	197, 1356
BcoDI	GTCTC	5 cut(s)	442, 690, 718, 755, 904
BcuI	ACTAGT	1 cut(s)	776
BfmI	CTRYAG	1 cut(s)	1779
BfrI	CTTAAG	1 cut(s)	142
BfuAI	ACCTGC	1 cut(s)	1945
BisI	GCNGC	5 cut(s)	366, 654, 938, 1074, 1485
BlpI	GCTNAGC	1 cut(s)	1886
BlsI	GCNGC	5 cut(s)	367, 655, 939, 1075, 1486
Bme1390I	CCNGG	2 cut(s)	197, 1356
Bme18I	GGWCC	2 cut(s)	1335, 2019
BmeT110I	CYCGRG	1 cut(s)	485
BmgBI	CACGTC	1 cut(s)	436
BmgT120I	GGNCC	2 cut(s)	1335, 2019
BmiI	GGNNCC	1 cut(s)	1336
BmrFI	CCNGG	2 cut(s)	197, 1356
BmsI	GCATC	4 cut(s)	134, 562, 1368, 1405
BmtI	GCTAGC	1 cut(s)	1875
BoxI	GACNNNNGTC	1 cut(s)	2169
BpiI	GAAGAC	1 cut(s)	1415
BplI	GAGNNNNNCTC	2 cut(s)	440, 472
Bpu1102I	GCTNAGC	1 cut(s)	1886
BpuEI	CTTGAG	4 cut(s)	298, 859, 1462, 1670
Bsa29I	ATCGAT	4 cut(s)	304, 802, 1638, 2218
BsaAI	YACGTR	1 cut(s)	659
BsaI	GGTCTC	2 cut(s)	690, 755
BsaJI	CCNNGG	5 cut(s)	83, 196, 376, 486, 1857
BsaWI	WCCGGW	3 cut(s)	75, 298, 1362
BsaXI	ACNNNNNCTCC	4 cut(s)	422, 452, 466, 496
Bsc4I	CCNNNNNNNGG	4 cut(s)	491, 492, 838, 1261
Bse118I	RCCGGY	3 cut(s)	999, 1531, 1784
Bse1I	ACTGG	3 cut(s)	765, 1122, 1266
BseAI	TCCGGA	1 cut(s)	1362
BseBI	CCWGG	2 cut(s)	197, 1356
BseCI	ATCGAT	4 cut(s)	304, 802, 1638, 2218
BseDI	CCNNGG	5 cut(s)	83, 196, 376, 486, 1857
BseGI	GGATG	5 cut(s)	229, 496, 1359, 1420, 1969
BseLI	CCNNNNNNNGG	4 cut(s)	491, 492, 838, 1261
BseMII	CTCAG	3 cut(s)	6, 143, 899
BseNI	ACTGG	3 cut(s)	765, 1122, 1266
BseRI	GAGGAG	2 cut(s)	918, 1115
BseXI	GCAGC	4 cut(s)	377, 665, 924, 1085
BsgI	GTGCAG	2 cut(s)	965, 1973
Bsh1236I	CGCG	2 cut(s)	1068, 1842
BshFI	GGCC	3 cut(s)	949, 1510, 2057
BshVI	ATCGAT	4 cut(s)	304, 802, 1638, 2218
BsiHKCI	CYCGRG	1 cut(s)	485
BsiSI	CCGG	6 cut(s)	76, 299, 1000, 1363, 1532, 1785
BslFI	GGGAC	1 cut(s)	765
BslI	CCNNNNNNNGG	4 cut(s)	491, 492, 838, 1261
BsmAI	GTCTC	5 cut(s)	442, 690, 718, 755, 904
BsmBI	CGTCTC	1 cut(s)	442
BsmFI	GGGAC	1 cut(s)	765
BsmI	GAATGC	1 cut(s)	329
BsnI	GGCC	3 cut(s)	949, 1510, 2057
Bso31I	GGTCTC	2 cut(s)	690, 755
BsoBI	CYCGRG	1 cut(s)	485
Bsp13I	TCCGGA	1 cut(s)	1362
Bsp1407I	TGTACA	1 cut(s)	2149
Bsp1720I	GCTNAGC	1 cut(s)	1886
Bsp68I	TCGCGA	1 cut(s)	1842
BspACI	CCGC	4 cut(s)	233, 1484, 2061, 2195
BspANI	GGCC	3 cut(s)	949, 1510, 2057
BspCNI	CTCAG	3 cut(s)	7, 142, 900
BspDI	ATCGAT	4 cut(s)	304, 802, 1638, 2218
BspEI	TCCGGA	1 cut(s)	1362
BspFNI	CGCG	2 cut(s)	1068, 1842
BspLI	GGNNCC	1 cut(s)	1336
BspMI	ACCTGC	1 cut(s)	1945
BspOI	GCTAGC	1 cut(s)	1875
BspPI	GGATC	7 cut(s)	309, 1341, 1634, 1643, 1722, 1845, 2205
BspTI	CTTAAG	1 cut(s)	142
BspTNI	GGTCTC	2 cut(s)	690, 755
BsrFI	RCCGGY	3 cut(s)	999, 1531, 1784
BsrGI	TGTACA	1 cut(s)	2149
BsrI	ACTGG	3 cut(s)	765, 1122, 1266
BssAI	RCCGGY	3 cut(s)	999, 1531, 1784
BssECI	CCNNGG	5 cut(s)	83, 196, 376, 486, 1857
BssNAI	GTATAC	1 cut(s)	774
BssSI	CACGAG	1 cut(s)	1047
BssT1I	CCWWGG	2 cut(s)	83, 376
Bst1107I	GTATAC	1 cut(s)	774
Bst2BI	CACGAG	1 cut(s)	1047
Bst2UI	CCWGG	2 cut(s)	197, 1356
Bst4CI	ACNGT	2 cut(s)	242, 2154
Bst6I	CTCTTC	2 cut(s)	571, 780
BstAFI	CTTAAG	1 cut(s)	142
BstAUI	TGTACA	1 cut(s)	2149
BstBAI	YACGTR	1 cut(s)	659
BstC8I	GCNNGC	5 cut(s)	329, 632, 1001, 1873, 2059
BstDEI	CTNAG	8 cut(s)	15, 129, 571, 908, 1085, 1233, 1748, 1886
BstDSI	CCRYGG	1 cut(s)	1857
BstF5I	GGATG	5 cut(s)	229, 496, 1359, 1420, 1969
BstFNI	CGCG	2 cut(s)	1068, 1842
BstMAI	GTCTC	5 cut(s)	442, 690, 718, 755, 904
BstMWI	GCNNNNNNNGC	2 cut(s)	946, 1516
BstNI	CCWGG	2 cut(s)	197, 1356
BstNSI	RCATGY	1 cut(s)	634
BstPAI	GACNNNNGTC	1 cut(s)	2169
BstSCI	CCNGG	2 cut(s)	195, 1354
BstSFI	CTRYAG	1 cut(s)	1779
BstUI	CGCG	2 cut(s)	1068, 1842
BstV1I	GCAGC	4 cut(s)	377, 665, 924, 1085
BstV2I	GAAGAC	1 cut(s)	1415
BstX2I	RGATCY	2 cut(s)	1346, 1714
BstYI	RGATCY	2 cut(s)	1346, 1714
BstZ17I	GTATAC	1 cut(s)	774
Bsu15I	ATCGAT	4 cut(s)	304, 802, 1638, 2218
BsuRI	GGCC	3 cut(s)	949, 1510, 2057
BsuTUI	ATCGAT	4 cut(s)	304, 802, 1638, 2218
BtgI	CCRYGG	1 cut(s)	1857
BtgZI	GCGATG	2 cut(s)	1401, 2082
BtrI	CACGTC	1 cut(s)	436
BtsCI	GGATG	5 cut(s)	229, 496, 1359, 1420, 1969
BtsI	GCAGTG	1 cut(s)	290
BtsIMutI	CAGTG	2 cut(s)	290, 474
BtuMI	TCGCGA	1 cut(s)	1842
BveI	ACCTGC	1 cut(s)	1945
Cac8I	GCNNGC	5 cut(s)	329, 632, 1001, 1873, 2059
Cfr10I	RCCGGY	3 cut(s)	999, 1531, 1784
Cfr13I	GGNCC	2 cut(s)	1335, 2019
ClaI	ATCGAT	4 cut(s)	304, 802, 1638, 2218
Csp6I	GTAC	3 cut(s)	671, 2118, 2150
CviAII	CATG	4 cut(s)	408, 631, 813, 2003
CviQI	GTAC	3 cut(s)	671, 2118, 2150
DdeI	CTNAG	8 cut(s)	15, 129, 571, 908, 1085, 1233, 1748, 1886
DraI	TTTAAA	2 cut(s)	1471, 1722
EaeI	YGGCCR	2 cut(s)	947, 2055
Eam1104I	CTCTTC	2 cut(s)	571, 780
EarI	CTCTTC	2 cut(s)	571, 780
Eco130I	CCWWGG	2 cut(s)	83, 376
Eco147I	AGGCCT	1 cut(s)	1510
Eco31I	GGTCTC	2 cut(s)	690, 755
Eco32I	GATATC	1 cut(s)	1846
Eco47I	GGWCC	2 cut(s)	1335, 2019
Eco57I	CTGAAG	2 cut(s)	531, 804
Eco72I	CACGTG	1 cut(s)	659
Eco88I	CYCGRG	1 cut(s)	485
EcoRI	GAATTC	2 cut(s)	31, 1121
EcoRII	CCWGG	2 cut(s)	195, 1354
EcoRV	GATATC	1 cut(s)	1846
EcoT14I	CCWWGG	2 cut(s)	83, 376
ErhI	CCWWGG	2 cut(s)	83, 376
Esp3I	CGTCTC	1 cut(s)	442
FaeI	CATG	4 cut(s)	411, 634, 816, 2006
FalI	AAGNNNNNCTT	2 cut(s)	1701, 1733
FaqI	GGGAC	1 cut(s)	765
FatI	CATG	4 cut(s)	407, 630, 812, 2002
FauI	CCCGC	1 cut(s)	2054
FblI	GTMKAC	3 cut(s)	773, 976, 1621
Fnu4HI	GCNGC	5 cut(s)	366, 654, 938, 1074, 1485
FokI	GGATG	5 cut(s)	236, 503, 1346, 1427, 1976
Fsp4HI	GCNGC	5 cut(s)	366, 654, 938, 1074, 1485
GluI	GCNGC	5 cut(s)	366, 654, 938, 1074, 1485
HaeIII	GGCC	3 cut(s)	949, 1510, 2057
HapII	CCGG	6 cut(s)	76, 299, 1000, 1363, 1532, 1785
Hin1II	CATG	4 cut(s)	411, 634, 816, 2006
HincII	GTYRAC	1 cut(s)	238
HindII	GTYRAC	1 cut(s)	238
HpaII	CCGG	6 cut(s)	76, 299, 1000, 1363, 1532, 1785
HphI	GGTGA	6 cut(s)	131, 278, 809, 1025, 1276, 1536
Hpy166II	GTNNAC	5 cut(s)	238, 774, 977, 1622, 2150
Hpy8I	GTNNAC	5 cut(s)	238, 774, 977, 1622, 2150
HpyAV	CCTTC	8 cut(s)	96, 414, 558, 1261, 1394, 1424, 1610, 1937
HpyCH4III	ACNGT	2 cut(s)	242, 2154
HpyCH4IV	ACGT	2 cut(s)	435, 658
HpyF10VI	GCNNNNNNNGC	2 cut(s)	946, 1516
HpyF3I	CTNAG	8 cut(s)	15, 129, 571, 908, 1085, 1233, 1748, 1886
HpySE526I	ACGT	2 cut(s)	435, 658
Hsp92II	CATG	4 cut(s)	411, 634, 816, 2006
Kpn2I	TCCGGA	1 cut(s)	1362
KroI	GCCGGC	1 cut(s)	999
KroNI	GCCGGC	1 cut(s)	1001
LmnI	GCTCC	3 cut(s)	251, 1102, 2064
Lsp1109I	GCAGC	4 cut(s)	377, 665, 924, 1085
LweI	GCATC	4 cut(s)	134, 562, 1368, 1405
MaeII	ACGT	2 cut(s)	435, 658
MaeIII	GTNAC	5 cut(s)	1564, 1817, 1934, 1966, 2174
MfeI	CAATTG	1 cut(s)	932
MflI	RGATCY	2 cut(s)	1346, 1714
MlsI	TGGCCA	1 cut(s)	2057
MluNI	TGGCCA	1 cut(s)	2057
MlyI	GAGTC	3 cut(s)	26, 458, 2159
MmeI	TCCRAC	5 cut(s)	229, 270, 597, 1613, 1880
Mox20I	TGGCCA	1 cut(s)	2057
MroI	TCCGGA	1 cut(s)	1362
MroNI	GCCGGC	1 cut(s)	999
MroXI	GAANNNNTTC	2 cut(s)	585, 1434
MscI	TGGCCA	1 cut(s)	2057
MslI	CAYNNNNRTG	1 cut(s)	180
Msp20I	TGGCCA	1 cut(s)	2057
MspA1I	CMGCKG	2 cut(s)	2061, 2195
MspCI	CTTAAG	1 cut(s)	142
MspI	CCGG	6 cut(s)	76, 299, 1000, 1363, 1532, 1785
MspR9I	CCNGG	2 cut(s)	197, 1356
MunI	CAATTG	1 cut(s)	932
Mva1269I	GAATGC	1 cut(s)	329
MvaI	CCWGG	2 cut(s)	197, 1356
MvnI	CGCG	2 cut(s)	1068, 1842
MwoI	GCNNNNNNNGC	2 cut(s)	946, 1516
NaeI	GCCGGC	1 cut(s)	1001
NgoMIV	GCCGGC	1 cut(s)	999
NheI	GCTAGC	1 cut(s)	1871
NlaIII	CATG	4 cut(s)	411, 634, 816, 2006
NlaIV	GGNNCC	1 cut(s)	1336
NmuCI	GTSAC	1 cut(s)	1817
NruI	TCGCGA	1 cut(s)	1842
NspI	RCATGY	1 cut(s)	634
PaeI	GCATGC	1 cut(s)	634
PceI	AGGCCT	1 cut(s)	1510
PctI	GAATGC	1 cut(s)	329
PdiI	GCCGGC	1 cut(s)	1001
PdmI	GAANNNNTTC	2 cut(s)	585, 1434
PfeI	GAWTC	9 cut(s)	79, 134, 467, 479, 662, 690, 1277, 1322, 1366
PflFI	GACNNNGTC	1 cut(s)	898
PkrI	GCNGC	5 cut(s)	367, 655, 939, 1075, 1486
PleI	GAGTC	3 cut(s)	25, 457, 2159
PmaCI	CACGTG	1 cut(s)	659
PmlI	CACGTG	1 cut(s)	659
PpsI	GAGTC	3 cut(s)	25, 457, 2159
Ppu21I	YACGTR	1 cut(s)	659
PshAI	GACNNNNGTC	1 cut(s)	2169
Psp6I	CCWGG	2 cut(s)	195, 1354
PspCI	CACGTG	1 cut(s)	659
PspGI	CCWGG	2 cut(s)	195, 1354
PspN4I	GGNNCC	1 cut(s)	1336
PspPI	GGNCC	2 cut(s)	1335, 2019
PsuI	RGATCY	2 cut(s)	1346, 1714
PsyI	GACNNNGTC	1 cut(s)	898
RruI	TCGCGA	1 cut(s)	1842
RsaI	GTAC	3 cut(s)	672, 2119, 2151
RsaNI	GTAC	3 cut(s)	671, 2118, 2150
RseI	CAYNNNNRTG	1 cut(s)	180
SatI	GCNGC	5 cut(s)	366, 654, 938, 1074, 1485
Sau96I	GGNCC	2 cut(s)	1335, 2019
SchI	GAGTC	3 cut(s)	26, 458, 2159
ScrFI	CCNGG	2 cut(s)	197, 1356
SfaNI	GCATC	4 cut(s)	134, 562, 1368, 1405
SfcI	CTRYAG	1 cut(s)	1779
SinI	GGWCC	2 cut(s)	1335, 2019
SmiMI	CAYNNNNRTG	1 cut(s)	180
SmlI	CTYRAG	5 cut(s)	142, 277, 874, 1441, 1649
SmoI	CTYRAG	5 cut(s)	142, 277, 874, 1441, 1649
SpeI	ACTAGT	1 cut(s)	776
SphI	GCATGC	1 cut(s)	634
SseBI	AGGCCT	1 cut(s)	1510
SsiI	CCGC	4 cut(s)	233, 1484, 2061, 2195
SspI	AATATT	1 cut(s)	1306
StuI	AGGCCT	1 cut(s)	1510
StyD4I	CCNGG	2 cut(s)	195, 1354
StyI	CCWWGG	2 cut(s)	83, 376
TaaI	ACNGT	2 cut(s)	242, 2154
TaiI	ACGT	2 cut(s)	438, 661
TaqI	TCGA	6 cut(s)	304, 447, 802, 916, 1638, 2218
TaqII	GACCGA	1 cut(s)	714
TatI	WGTACW	1 cut(s)	2149
TauI	GCSGC	1 cut(s)	1487
TfiI	GAWTC	9 cut(s)	79, 134, 467, 479, 662, 690, 1277, 1322, 1366
TscAI	CASTG	2 cut(s)	290, 481
TseFI	GTSAC	1 cut(s)	1817
TseI	GCWGC	4 cut(s)	365, 653, 937, 1073
Tsp45I	GTSAC	1 cut(s)	1817
TspGWI	ACGGA	2 cut(s)	1427, 2003
TspRI	CASTG	2 cut(s)	290, 481
Tth111I	GACNNNGTC	1 cut(s)	898
Vha464I	CTTAAG	1 cut(s)	142
VpaK11BI	GGWCC	2 cut(s)	1335, 2019
XapI	RAATTY	6 cut(s)	31, 583, 1121, 1154, 1769, 2205
XbaI	TCTAGA	2 cut(s)	44, 1451
XceI	RCATGY	1 cut(s)	634
XmiI	GTMKAC	3 cut(s)	773, 976, 1621
XmnI	GAANNNNTTC	2 cut(s)	585, 1434

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.