Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0010069

Physical Location & Seq

Genomic Coordinates Reverse (-)

5520880 .. 5525150

Gene Structure 4271 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G16290.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2631 bp

ATGGCTTGTCGTTTCCCTCTGCATTCTTCGTCACCTTCTCAATTCCTTTCACCGGAAAATCGTCAGAGACTACCCAGAAATTACCCTTCAATCTCATGCCAAAACAATTCAGCTACGAACGTTGTCCATGAAGATGGTGATGATAACGACAAAGCCAAGACAAACCAAGTCAATCTTCTCGCAATACCAATCACACTCACTATAATCTCCGCTTCTCTAGCCAAACCGTCGTTCGCGGCTGCGAAGGTAACGGAGAGAAAGAGAACTCAGAAGAAACCTCAGGAGGCTTTGACACTTGAACAGCTTAAAGCTTGGTCCAAAGATTTACCTGTAGTTTCGAATCGTATACCTTATACTGACATTTTGAGCTTAAAAGCTGAAGGTAAGCTTAAGCATGTGATAAAGCCTCCTAATTTAAGTTTGCGGCAAAAGGCAGAGCCTGTGTTAGTAGTTTTGGAGGATTCTAGAGTATTAAGGACTGTGTTGCCTTCTTTAGAGGGTAATAAGAGGTTTTGGGAACAATGGGATGAGTTAGGGATTGATGTACAATGTGTTAATGCTTATACTCCTCCGGTTAAGAGACCTCCTGTGCCGTCTCCTTATTTAGGATTTTTGTGGAAAGTTCCTGCTTATATGTTAACATGGGTTAAGCCAAAGAAGGAGTCTAAACGTGCTGCTGAGTTGAAGAGAATGAGGGAGGATTTCAAGAGGCAGAGGAAGGAGGAGATTGAGACGATGAAAGAGGAAAGAGTGATGATGGAAAAGACAATGAAGGCGCAGAAGAAACAACAGGAGAGGAAGAAAAGGAAGGCTGTTAGGAAGAAGAAATACGAGGAGTCTCTGCGTGAGGCGAGGAAAAATTATCGAGATATGGCGGATATGTGGGCAAGATTGGCTCAGGATCCTAATGTGGCTACTGCTCTTGGATTGGTATTCTTTTATATATTTTACCGTGTGGTGGTTCTCAACTATAGGAAGCAAAAGAAGGATTATGAAGACAGGTTGAAGATTGAGAAGGCGGAAGCAGATGAGAGGAAGAAAATGAGGGAGTTGGAAAGGGAGATGGAGGGAATTGAGGAAGAGGATGAGGAGGTTGAGGAAGGTACAGGTGAGAAAAATCCTTACTTACAGATGGCGATGCAGTTCATGAAGTCAGGTGCACGTGTGAGACGAGCATCAAATAAGAGGTTACCTGAGTATCTTGAGAGAGGTGTGGATGTCAAATTTACAGATGTTGCTGGACTTGGGAAGATTCGTCTTGAACTTGAGGAAATCGTTAAGTTTTTTACTCATGGAGAGATGTACCGCAGGAGAGGGGTCAAGATTCCAGGTGGTATTCTTTTATGTGGGCCTCCTGGGGTCGGAAAAACTTTACTGGCAAAAGCTGTAGCTGGTGAAGCAGGAGTCAATTTCTTCTCTATCTCTGCTTCTCAGTTTGTGGAAATATATGTTGGTGTTGGTGCATCTCGTGTCCGAGCATTATACCAAGAAGCTAGAGAAAATGCTCCATCTGTGGTCTTCATTGATGAATTGGATGCTGTTGGAAGGGAGCGTGGGTTAATAAAGGGTTCTGGAGGACAAGAAAGGGATGCCACTCTTAATCAGCTACTTGTTTCTTTAGATGGTTTTGAAGGAAGGGGAGAGGTCATCACCATTGCTTCCACAAACAGACCAGACATTCTCGATCCTGCGCTTGTGAGGCCTGGACGGTTCGACCGCAAAATCTTTATCCCTAAACCTGGTCTTATTGGACGGATGGAAATTCTGCAGGTTCATGCTCGTAAGAAGCCGATGGCTGAAGATTTAGACTATATGGCAGTTGCTAGCATGACAGATGGCATGGTTGGAGCAGAGCTTGCTAATATTGTTGAGATCGCGGCAATTAATATGATGCGTGATGGAAGAACAGAGTTAACAACAGATGATTTGCTTCAAGCTGCACAAATAGAAGAAAGAGGAATGTTAGATAGAAAAGACAGGAGCTTGGAGACATGGCGACAAGTTGCGATCAATGAAGCTGCAATGGCTGTTGTAGCAGTGAACTTTCCTGATATGAAGAATATAGAATTTCTGACAATCAACCCTAGAGCTGGTAGAGAATTGGGTTATGTCCGGGTGAAGATGGATCATATCAAATTTAAGGAAGGCATGCTTAGTCGACAATCCATCTTGGATCACATCACTGTTCAGTTAGCACCCCGTGCTGCAGATGAACTATGGTACGGTGAGGATCAGTTAAGCACGATATGGGCTGAAACATCGGATAACGCAAGATCAGCTGCTCGATCATTGGTTCTTGGTGGTCTTTCTGATAAGCATCATGGCTTGAATAACTTCTGGGTAGCTGATCGAATTAACGATATTGATGTGGAGGCATTGCGGATATTGAACATGTGTTACGAGCGTGCTAAAGAGATTCTTGGAAGAAACAGGACGCTCATGGACGAGGTGGTAGAGAAACTGGTTCAAAAGAAAAGTCTAACGAAACAAGAATTCTTCACTCTTGTTGAGCTCTATGGGTCCAGTAAACCAATGCCACCGAGTATCCTTGAACTTAGGAAGATCAAACGGCTTGAGCTAGAAGAGATGGTGCTGAAACTGGACATGACTACCGCAAGAAACAGTTCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004176 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019538 GO:0031967 GO:0031975 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0070011 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA Peptidase_M41

Protein Analysis

876

Amino Acids

99.86

Weight (kDa)

9.27

Isoelectric Point (pI)

42.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA	PF00004	446 - 578	9.3e-43	ATPase family associated with various cellular activities (AAA)
AAA_lid_3	PF17862	601 - 644	1.1e-09	AAA+ lid domain
Peptidase_M41	PF01434	665 - 832	3.6e-10	Peptidase family M41

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010069)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G16290
fragaria_vesca	FvH4_6g32150 FvH4_6g32150 FvH4_6g32150
malus_domestica	MD09G1206000.v1.1
prunus_persica	Prupe.3G061400_v2.0.a1 Prupe.3G065400_v2.0.a1
pyrus_communis	pycom09g12280
rosa_chinensis	RchiOBHm_Chr2g0140041
rosa_laevigata	RLG00000019844
rosa_multiflora	Rmu_co8464017.1_g000001 Rmu_co8471751.1_g000001 Rmu_sc0010982.1_g000001
rosa_roxburghii	Rroxscaffold_2G00105120
rosa_rugosa	Rorug02G0360600 Rorug02G0360700
rosa_samantha	Rh2AG411300 Rh2BG421500 Rh2CG397400 Rh2DG431000
rosa_wichuraiana	Rw2G033690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1759
AccI	GTMKAC	2 cut(s)	346, 2158
AccII	CGCG	2 cut(s)	236, 1877
AclI	AACGTT	1 cut(s)	120
AclWI	GGATC	6 cut(s)	896, 909, 1679, 2133, 2181, 2238
AcsI	RAATTY	5 cut(s)	1223, 1761, 2066, 2135, 2492
AcuI	CTGAAG	2 cut(s)	399, 1818
AcvI	CACGTG	1 cut(s)	1163
AdeI	CACNNNGTG	1 cut(s)	2201
AfaI	GTAC	4 cut(s)	546, 1105, 1304, 2222
AfiI	CCNNNNNNNGG	6 cut(s)	52, 605, 958, 1361, 1739, 2090
AflII	CTTAAG	1 cut(s)	389
AflIII	ACRYGT	2 cut(s)	1162, 2391
AjnI	CCWGG	4 cut(s)	1327, 1354, 1702, 1738
AjuI	GAANNNNNNNTTGG	6 cut(s)	159, 191, 215, 247, 1434, 1466
Alw21I	GWGCWC	2 cut(s)	1162, 2514
Alw26I	GTCTC	7 cut(s)	61, 574, 600, 725, 843, 1162, 1982
Alw44I	GTGCAC	1 cut(s)	1158
AlwI	GGATC	6 cut(s)	896, 909, 1679, 2133, 2181, 2238
AlwNI	CAGNNNCTG	1 cut(s)	440
AoxI	GGCC	2 cut(s)	1349, 1700
ApaLI	GTGCAC	1 cut(s)	1158
ApeKI	GCWGC	6 cut(s)	239, 674, 1937, 2018, 2204, 2279
ApoI	RAATTY	5 cut(s)	1223, 1761, 2066, 2135, 2492
ArsI	GACNNNNNNTTYG	4 cut(s)	647, 679, 2461, 2493
AseI	ATTAAT	1 cut(s)	1884
Asp700I	GAANNNNTTC	2 cut(s)	2333, 2623
AspLEI	GCGC	2 cut(s)	778, 1693
AspS9I	GGNCC	3 cut(s)	315, 1349, 2520
AsuC2I	CCSGG	1 cut(s)	2114
AsuHPI	GGTGA	8 cut(s)	24, 42, 149, 1121, 1406, 1642, 2128, 2237
AsuII	TTCGAA	1 cut(s)	338
AsuNHI	GCTAGC	1 cut(s)	1823
AvaII	GGWCC	2 cut(s)	315, 2520
AxyI	CCTNAGG	1 cut(s)	279
BaeGI	GKGCMC	1 cut(s)	1162
BaeI	ACNNNNGTAYC	2 cut(s)	1181, 1214
BamHI	GGATCC	1 cut(s)	901
BanII	GRGCYC	1 cut(s)	2514
BarI	GAAGNNNNNNTAC	2 cut(s)	812, 844
BauI	CACGAG	1 cut(s)	1467
BbrPI	CACGTG	1 cut(s)	1163
BbsI	GAAGAC	2 cut(s)	1002, 1510
Bbv12I	GWGCWC	2 cut(s)	1162, 2514
BbvI	GCAGC	6 cut(s)	226, 661, 1924, 2005, 2191, 2266
BceAI	ACGGC	2 cut(s)	577, 2585
BciT130I	CCWGG	4 cut(s)	1329, 1356, 1704, 1740
BciVI	GTATCC	1 cut(s)	2555
BcnI	CCSGG	1 cut(s)	2114
BcoDI	GTCTC	7 cut(s)	61, 574, 600, 725, 843, 1162, 1982
BfaI	CTAG	6 cut(s)	218, 465, 1494, 1824, 2085, 2579
BfmI	CTRYAG	5 cut(s)	330, 970, 1386, 1766, 2205
BfrI	CTTAAG	1 cut(s)	389
BfuAI	ACCTGC	1 cut(s)	1759
BfuI	GTATCC	1 cut(s)	2555
BisI	GCNGC	9 cut(s)	237, 240, 425, 675, 1878, 1938, 2019, 2205, 2280
BlsI	GCNGC	9 cut(s)	238, 241, 426, 676, 1879, 1939, 2020, 2206, 2281
Bme1390I	CCNGG	5 cut(s)	1329, 1356, 1704, 1740, 2114
Bme18I	GGWCC	2 cut(s)	315, 2520
BmgT120I	GGNCC	3 cut(s)	315, 1349, 2520
BmiI	GGNNCC	2 cut(s)	903, 2521
BmrFI	CCNGG	5 cut(s)	1329, 1356, 1704, 1740, 2114
BmsI	GCATC	7 cut(s)	1128, 1184, 1472, 1525, 1579, 1881, 2326
BmtI	GCTAGC	1 cut(s)	1827
BpiI	GAAGAC	2 cut(s)	1002, 1510
BpmI	CTGGAG	1 cut(s)	1593
Bpu10I	CCTNAGC	1 cut(s)	897
Bpu14I	TTCGAA	1 cut(s)	338
BpuEI	CTTGAG	3 cut(s)	1223, 1286, 2594
BpuMI	CCSGG	1 cut(s)	2114
BsaAI	YACGTR	1 cut(s)	1163
BsaBI	GATNNNNATC	1 cut(s)	2316
BsaI	GGTCTC	1 cut(s)	574
BsaJI	CCNNGG	1 cut(s)	1355
BsaWI	WCCGGW	2 cut(s)	52, 571
BsaXI	ACNNNNNCTCC	2 cut(s)	1541, 1571
Bsc4I	CCNNNNNNNGG	6 cut(s)	52, 605, 958, 1361, 1739, 2090
Bse1I	ACTGG	4 cut(s)	1380, 2466, 2523, 2604
Bse21I	CCTNAGG	1 cut(s)	279
Bse3DI	GCAATG	3 cut(s)	1653, 2028, 2375
Bse8I	GATNNNNATC	1 cut(s)	2316
BseBI	CCWGG	4 cut(s)	1329, 1356, 1704, 1740
BseDI	CCNNGG	1 cut(s)	1355
BseGI	GGATG	6 cut(s)	532, 1090, 1222, 1540, 1594, 1761
BseJI	GATNNNNATC	1 cut(s)	2316
BseLI	CCNNNNNNNGG	6 cut(s)	52, 605, 958, 1361, 1739, 2090
BseMI	GCAATG	3 cut(s)	1653, 2028, 2375
BseMII	CTCAG	6 cut(s)	281, 293, 669, 911, 1185, 1445
BseNI	ACTGG	4 cut(s)	1380, 2466, 2523, 2604
BseRI	GAGGAG	4 cut(s)	558, 737, 848, 1103
BseSI	GKGCMC	1 cut(s)	1162
BseXI	GCAGC	6 cut(s)	226, 661, 1924, 2005, 2191, 2266
BsgI	GTGCAG	1 cut(s)	1923
Bsh1236I	CGCG	2 cut(s)	236, 1877
Bsh1285I	CGRYCG	1 cut(s)	1717
BshFI	GGCC	2 cut(s)	1351, 1702
BsiEI	CGRYCG	1 cut(s)	1717
BsiHKAI	GWGCWC	2 cut(s)	1162, 2514
BsiSI	CCGG	3 cut(s)	53, 572, 2113
BslI	CCNNNNNNNGG	6 cut(s)	52, 605, 958, 1361, 1739, 2090
BsmAI	GTCTC	7 cut(s)	61, 574, 600, 725, 843, 1162, 1982
BsmBI	CGTCTC	3 cut(s)	600, 725, 1162
BsmI	GAATGC	1 cut(s)	22
BsnI	GGCC	2 cut(s)	1351, 1702
Bso31I	GGTCTC	1 cut(s)	574
Bsp119I	TTCGAA	1 cut(s)	338
Bsp1286I	GDGCHC	2 cut(s)	1162, 2514
Bsp1407I	TGTACA	1 cut(s)	544
BspANI	GGCC	2 cut(s)	1351, 1702
BspCNI	CTCAG	6 cut(s)	280, 292, 670, 910, 1186, 1444
BspFNI	CGCG	2 cut(s)	236, 1877
BspHI	TCATGA	1 cut(s)	1146
BspLI	GGNNCC	2 cut(s)	903, 2521
BspMAI	CTGCAG	2 cut(s)	1770, 2209
BspMI	ACCTGC	1 cut(s)	1759
BspOI	GCTAGC	1 cut(s)	1827
BspPI	GGATC	6 cut(s)	896, 909, 1679, 2133, 2181, 2238
BspT104I	TTCGAA	1 cut(s)	338
BspTI	CTTAAG	1 cut(s)	389
BspTNI	GGTCTC	1 cut(s)	574
BsrDI	GCAATG	3 cut(s)	1653, 2028, 2375
BsrGI	TGTACA	1 cut(s)	544
BsrI	ACTGG	4 cut(s)	1380, 2466, 2523, 2604
BssECI	CCNNGG	1 cut(s)	1355
BssNAI	GTATAC	1 cut(s)	347
BssSI	CACGAG	1 cut(s)	1467
Bst1107I	GTATAC	1 cut(s)	347
Bst2BI	CACGAG	1 cut(s)	1467
Bst2UI	CCWGG	4 cut(s)	1329, 1356, 1704, 1740
Bst4CI	ACNGT	7 cut(s)	228, 481, 953, 1710, 2185, 2225, 2624
Bst6I	CTCTTC	3 cut(s)	680, 1074, 2577
BstAFI	CTTAAG	1 cut(s)	389
BstAPI	GCANNNNNTGC	2 cut(s)	1856, 2201
BstAUI	TGTACA	1 cut(s)	544
BstBAI	YACGTR	1 cut(s)	1163
BstBI	TTCGAA	1 cut(s)	338
BstC8I	GCNNGC	4 cut(s)	1825, 1857, 2150, 2406
BstDEI	CTNAG	8 cut(s)	267, 279, 678, 897, 1194, 1431, 2153, 2555
BstEII	GGTNACC	1 cut(s)	1188
BstENI	CCTNNNNNAGG	1 cut(s)	603
BstF5I	GGATG	6 cut(s)	532, 1090, 1222, 1540, 1594, 1761
BstFNI	CGCG	2 cut(s)	236, 1877
BstHHI	GCGC	2 cut(s)	778, 1693
BstMAI	GTCTC	7 cut(s)	61, 574, 600, 725, 843, 1162, 1982
BstMCI	CGRYCG	1 cut(s)	1717
BstMWI	GCNNNNNNNGC	9 cut(s)	218, 893, 1397, 1699, 1856, 2024, 2033, 2201, 2276
BstNI	CCWGG	4 cut(s)	1329, 1356, 1704, 1740
BstNSI	RCATGY	3 cut(s)	398, 2152, 2395
BstPI	GGTNACC	1 cut(s)	1188
BstSCI	CCNGG	5 cut(s)	1327, 1354, 1702, 1738, 2112
BstSFI	CTRYAG	5 cut(s)	330, 970, 1386, 1766, 2205
BstSLI	GKGCMC	1 cut(s)	1162
BstUI	CGCG	2 cut(s)	236, 1877
BstV1I	GCAGC	6 cut(s)	226, 661, 1924, 2005, 2191, 2266
BstV2I	GAAGAC	2 cut(s)	1002, 1510
BstX2I	RGATCY	1 cut(s)	901
BstXI	CCANNNNNNTGG	1 cut(s)	134
BstYI	RGATCY	1 cut(s)	901
BstZ17I	GTATAC	1 cut(s)	347
Bsu36I	CCTNAGG	1 cut(s)	279
BsuI	GTATCC	1 cut(s)	2555
BsuRI	GGCC	2 cut(s)	1351, 1702
BtgZI	GCGATG	1 cut(s)	1151
BtsCI	GGATG	6 cut(s)	532, 1090, 1222, 1540, 1594, 1761
BtsI	GCAGTG	1 cut(s)	2043
BtsIMutI	CAGTG	2 cut(s)	2043, 2181
BveI	ACCTGC	1 cut(s)	1759
Cac8I	GCNNGC	4 cut(s)	1825, 1857, 2150, 2406
CaiI	CAGNNNCTG	1 cut(s)	440
CciI	TCATGA	1 cut(s)	1146
CfoI	GCGC	2 cut(s)	778, 1693
Cfr13I	GGNCC	3 cut(s)	315, 1349, 2520
CseI	GACGC	1 cut(s)	2443
CsiI	ACCWGGT	1 cut(s)	1738
Csp6I	GTAC	4 cut(s)	545, 1104, 1303, 2221
CviQI	GTAC	4 cut(s)	545, 1104, 1303, 2221
DdeI	CTNAG	8 cut(s)	267, 279, 678, 897, 1194, 1431, 2153, 2555
DraIII	CACNNNGTG	1 cut(s)	2201
Eam1104I	CTCTTC	3 cut(s)	680, 1074, 2577
EarI	CTCTTC	3 cut(s)	680, 1074, 2577
EciI	GGCGGA	2 cut(s)	890, 1034
Ecl136II	GAGCTC	1 cut(s)	2512
Eco147I	AGGCCT	1 cut(s)	1702
Eco24I	GRGCYC	1 cut(s)	2514
Eco31I	GGTCTC	1 cut(s)	574
Eco47I	GGWCC	2 cut(s)	315, 2520
Eco53kI	GAGCTC	1 cut(s)	2512
Eco57I	CTGAAG	2 cut(s)	399, 1818
Eco72I	CACGTG	1 cut(s)	1163
Eco81I	CCTNAGG	1 cut(s)	279
Eco91I	GGTNACC	1 cut(s)	1188
EcoICRI	GAGCTC	1 cut(s)	2512
EcoNI	CCTNNNNNAGG	1 cut(s)	603
EcoO65I	GGTNACC	1 cut(s)	1188
EcoRI	GAATTC	1 cut(s)	2492
EcoRII	CCWGG	4 cut(s)	1327, 1354, 1702, 1738
EcoT38I	GRGCYC	1 cut(s)	2514
Esp3I	CGTCTC	3 cut(s)	600, 725, 1162
FalI	AAGNNNNNCTT	8 cut(s)	159, 191, 372, 404, 2136, 2168, 2403, 2435
FblI	GTMKAC	2 cut(s)	346, 2158
Fnu4HI	GCNGC	9 cut(s)	237, 240, 425, 675, 1878, 1938, 2019, 2205, 2280
FokI	GGATG	6 cut(s)	539, 1097, 1229, 1547, 1601, 1768
FriOI	GRGCYC	1 cut(s)	2514
Fsp4HI	GCNGC	9 cut(s)	237, 240, 425, 675, 1878, 1938, 2019, 2205, 2280
FspBI	CTAG	6 cut(s)	218, 465, 1494, 1824, 2085, 2579
GlaI	GCGC	2 cut(s)	777, 1692
GluI	GCNGC	9 cut(s)	237, 240, 425, 675, 1878, 1938, 2019, 2205, 2280
GsuI	CTGGAG	1 cut(s)	1593
HaeIII	GGCC	2 cut(s)	1351, 1702
HapII	CCGG	3 cut(s)	53, 572, 2113
HgaI	GACGC	1 cut(s)	2443
HhaI	GCGC	2 cut(s)	778, 1693
Hin6I	GCGC	2 cut(s)	776, 1691
HinP1I	GCGC	2 cut(s)	776, 1691
HincII	GTYRAC	3 cut(s)	639, 1914, 2159
HindII	GTYRAC	3 cut(s)	639, 1914, 2159
HindIII	AAGCTT	2 cut(s)	309, 386
HinfI	GANTC	8 cut(s)	340, 461, 662, 836, 1252, 1324, 1404, 2416
HpaI	GTTAAC	2 cut(s)	639, 1914
HpaII	CCGG	3 cut(s)	53, 572, 2113
HphI	GGTGA	8 cut(s)	24, 42, 149, 1121, 1406, 1642, 2128, 2237
Hpy166II	GTNNAC	7 cut(s)	347, 639, 1160, 1914, 2041, 2159, 2528
Hpy188I	TCNGA	7 cut(s)	66, 270, 1364, 1475, 2073, 2263, 2311
Hpy8I	GTNNAC	7 cut(s)	347, 639, 1160, 1914, 2041, 2159, 2528
Hpy99I	CGWCG	1 cut(s)	232
HpyCH4III	ACNGT	7 cut(s)	228, 481, 953, 1710, 2185, 2225, 2624
HpyCH4IV	ACGT	3 cut(s)	120, 670, 1162
HpyCH4V	TGCA	8 cut(s)	22, 1141, 1160, 1463, 1768, 1940, 2021, 2207
HpyF10VI	GCNNNNNNNGC	9 cut(s)	218, 893, 1397, 1699, 1856, 2024, 2033, 2201, 2276
HpyF3I	CTNAG	8 cut(s)	267, 279, 678, 897, 1194, 1431, 2153, 2555
HpySE526I	ACGT	3 cut(s)	120, 670, 1162
HspAI	GCGC	2 cut(s)	776, 1691
KspAI	GTTAAC	2 cut(s)	639, 1914
LmnI	GCTCC	4 cut(s)	1510, 1549, 1847, 1980
Lsp1109I	GCAGC	6 cut(s)	226, 661, 1924, 2005, 2191, 2266
LweI	GCATC	7 cut(s)	1128, 1184, 1472, 1525, 1579, 1881, 2326
MabI	ACCWGGT	1 cut(s)	1738
MaeI	CTAG	6 cut(s)	218, 465, 1494, 1824, 2085, 2579
MaeII	ACGT	3 cut(s)	120, 670, 1162
MaeIII	GTNAC	4 cut(s)	30, 247, 1188, 2396
MflI	RGATCY	1 cut(s)	901
MhlI	GDGCHC	2 cut(s)	1162, 2514
MlyI	GAGTC	3 cut(s)	671, 845, 1413
MmeI	TCCRAC	4 cut(s)	1032, 1342, 1522, 1825
MroXI	GAANNNNTTC	2 cut(s)	2333, 2623
MslI	CAYNNNNRTG	1 cut(s)	132
MspA1I	CMGCKG	1 cut(s)	2279
MspCI	CTTAAG	1 cut(s)	389
MspI	CCGG	3 cut(s)	53, 572, 2113
MspR9I	CCNGG	5 cut(s)	1329, 1356, 1704, 1740, 2114
Mva1269I	GAATGC	1 cut(s)	22
MvaI	CCWGG	4 cut(s)	1329, 1356, 1704, 1740
MvnI	CGCG	2 cut(s)	236, 1877
MwoI	GCNNNNNNNGC	9 cut(s)	218, 893, 1397, 1699, 1856, 2024, 2033, 2201, 2276
NciI	CCSGG	1 cut(s)	2114
NheI	GCTAGC	1 cut(s)	1823
NlaIV	GGNNCC	2 cut(s)	903, 2521
NmuCI	GTSAC	1 cut(s)	30
NspI	RCATGY	3 cut(s)	398, 2152, 2395
NspV	TTCGAA	1 cut(s)	338
PaeI	GCATGC	1 cut(s)	2152
PagI	TCATGA	1 cut(s)	1146
PceI	AGGCCT	1 cut(s)	1702
PciI	ACATGT	1 cut(s)	2391
PcsI	WCGNNNNNNNCGW	1 cut(s)	1168
PctI	GAATGC	1 cut(s)	22
PdmI	GAANNNNTTC	2 cut(s)	2333, 2623
PfeI	GAWTC	5 cut(s)	340, 461, 1252, 1324, 2416
PkrI	GCNGC	9 cut(s)	238, 241, 426, 676, 1879, 1939, 2020, 2206, 2281
PleI	GAGTC	3 cut(s)	670, 844, 1412
PmaCI	CACGTG	1 cut(s)	1163
PmlI	CACGTG	1 cut(s)	1163
PpsI	GAGTC	3 cut(s)	670, 844, 1412
Ppu21I	YACGTR	1 cut(s)	1163
PscI	ACATGT	1 cut(s)	2391
PshBI	ATTAAT	1 cut(s)	1884
Psp124BI	GAGCTC	1 cut(s)	2514
Psp1406I	AACGTT	1 cut(s)	120
Psp6I	CCWGG	4 cut(s)	1327, 1354, 1702, 1738
PspCI	CACGTG	1 cut(s)	1163
PspEI	GGTNACC	1 cut(s)	1188
PspGI	CCWGG	4 cut(s)	1327, 1354, 1702, 1738
PspN4I	GGNNCC	2 cut(s)	903, 2521
PspPI	GGNCC	3 cut(s)	315, 1349, 2520
PsrI	GAACNNNNNNTAC	2 cut(s)	2381, 2413
PstI	CTGCAG	2 cut(s)	1770, 2209
PstNI	CAGNNNCTG	1 cut(s)	440
PsuI	RGATCY	1 cut(s)	901
PvuII	CAGCTG	1 cut(s)	2279
RsaI	GTAC	4 cut(s)	546, 1105, 1304, 2222
RsaNI	GTAC	4 cut(s)	545, 1104, 1303, 2221
RseI	CAYNNNNRTG	1 cut(s)	132
SacI	GAGCTC	1 cut(s)	2514
SalI	GTCGAC	1 cut(s)	2157
SatI	GCNGC	9 cut(s)	237, 240, 425, 675, 1878, 1938, 2019, 2205, 2280
Sau96I	GGNCC	3 cut(s)	315, 1349, 2520
SchI	GAGTC	3 cut(s)	671, 845, 1413
ScrFI	CCNGG	5 cut(s)	1329, 1356, 1704, 1740, 2114
SduI	GDGCHC	2 cut(s)	1162, 2514
SexAI	ACCWGGT	1 cut(s)	1738
SfaNI	GCATC	7 cut(s)	1128, 1184, 1472, 1525, 1579, 1881, 2326
SfcI	CTRYAG	5 cut(s)	330, 970, 1386, 1766, 2205
SfuI	TTCGAA	1 cut(s)	338
SinI	GGWCC	2 cut(s)	315, 2520
SmiMI	CAYNNNNRTG	1 cut(s)	132
SmlI	CTYRAG	4 cut(s)	389, 1202, 1265, 2573
SmoI	CTYRAG	4 cut(s)	389, 1202, 1265, 2573
SphI	GCATGC	1 cut(s)	2152
SseBI	AGGCCT	1 cut(s)	1702
SspI	AATATT	1 cut(s)	1864
SspMI	CTAG	6 cut(s)	218, 465, 1494, 1824, 2085, 2579
SstI	GAGCTC	1 cut(s)	2514
StuI	AGGCCT	1 cut(s)	1702
StyD4I	CCNGG	5 cut(s)	1327, 1354, 1702, 1738, 2112
TaaI	ACNGT	7 cut(s)	228, 481, 953, 1710, 2185, 2225, 2624
TaiI	ACGT	3 cut(s)	123, 673, 1165
TaqI	TCGA	7 cut(s)	338, 865, 1683, 1713, 2158, 2284, 2350
TatI	WGTACW	1 cut(s)	544
TauI	GCSGC	3 cut(s)	239, 427, 1880
TfiI	GAWTC	5 cut(s)	340, 461, 1252, 1324, 2416
TscAI	CASTG	2 cut(s)	2043, 2188
TseFI	GTSAC	1 cut(s)	30
TseI	GCWGC	6 cut(s)	239, 674, 1937, 2018, 2204, 2279
Tsp45I	GTSAC	1 cut(s)	30
TspGWI	ACGGA	2 cut(s)	266, 1768
TspRI	CASTG	2 cut(s)	2043, 2188
Vha464I	CTTAAG	1 cut(s)	389
VneI	GTGCAC	1 cut(s)	1158
VpaK11BI	GGWCC	2 cut(s)	315, 2520
VspI	ATTAAT	1 cut(s)	1884
XagI	CCTNNNNNAGG	1 cut(s)	603
XapI	RAATTY	5 cut(s)	1223, 1761, 2066, 2135, 2492
XbaI	TCTAGA	1 cut(s)	464
XceI	RCATGY	3 cut(s)	398, 2152, 2395
XmiI	GTMKAC	2 cut(s)	346, 2158
XmnI	GAANNNNTTC	2 cut(s)	2333, 2623
XspI	CTAG	6 cut(s)	218, 465, 1494, 1824, 2085, 2579

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.