Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0010069

Physical Location & Seq

Genomic Coordinates Reverse (-)

57372854 .. 57381389

Gene Structure 8536 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000019844

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2877 bp

ATGGTGACCGGCCGGAAAACAACGTCGTGCGACGAAGAAATGGCCGAGTCCAAGGCGGTGGAGAACGGAACAACCACCATGAGTACTACTGGGCAGGCGACCAAGTCATCAGCTCAACTCGGCGCCTTGCTCTGGAAGGCTGACGTGGCGCATGTGTGCCTCAGGCTGCTCTGCATGGCGTCCTCCGTCACGGCGCTGTCGTTCATGGTCACCGCCCAGCAAGCCAGCACCGTCACTATCTACGGTTTCCATCTCCCCGTTTACTCCAAGTGGTCCTTCTCCGAGTCCTTCGAATATCTGGTTGCAGTCACGGCAGCTGTCACGGTTCATTCATTTCTGCAACTACTGATAAATGGATCTAGGCTGCTGAGAAAGTCTCCGATGATTCCCTCAAGGAATCATGCCTGGCTTAGCTTTGCTGGGGATCAGGTATTTGCATATGCAATGATGAGCGCAGGGTCAGCTGCATCCGGAGTAAGCAACCTGAATCGCACAGGAATCCGGCACACACCTCTCCCGAATTTCTGTAAACCACTAAATATCTTCTGCAACCACATTGCCATCTCGATAGGCTTCACTTTCTTAAGCTGCCTCTTGCTGGCCACATCTGCTGTTCAGAATATTCCATTAACACACCCCTGTTGGATCAAAAGTTCTACTAGAGGTCTCCCCGTCGTCTCGAACCGCATCCCCTACACTCAGCTCCTCGAATTGAACCGCGAATCGAAGCTCAAGCATGTAATTAAGGCTCCGGGGATCGAATTGCGGCAGAAGGCCGAACCGGTCCTGGTGGTTCTCGACGATTCGAGAGTGCTGCGCACCGTTTTGCCGTCGCCGGAGAGTGACAAGAGGTTCTGGGAGGAATGGGAGAAGTTGAACTTGAACTCTTTGTGCGTCAACGCCTACACGCCGCCGCTGAGGCCGCCGGAGGTGCCTATGCCGTACCTGAGCTTCCTGGCGAGAATGCCGGCCGTGGTGGCGTGGTTTTCGAGGACGAGGAAGCCGGCGAAGAAGGAGAGCAAGAGGGCGGCGGAGCTGAGGCAGGCGAGGGAGGAGTTCAAGATGCAGAGGAAGGAGGAGCTGGAGAGAATGAGGAACGAGAGAGAGATGATTGATAGGGCCATGAAGGCTCAGAAGAAGGAGGAGGAGAGGAGAGTGAGGAGAGAGAGAAGGAAGAAGAAGCACGACGAGTCGTTGAGGGAGGCTCGCCGGAATTACTTGCAGATGGCTAATGTGTGGGCCAATTTGGCTCAGGATTCGAATGTGGCCACCGCGCTGGGGTTGGTGTTCTTTTACATTTTTTACAGGACTGTGGTGTTTAGTTATAGGAGGCAGAAGAAGGATTATGAGGACAGGTTGAAGATTGAGCAGGCCGAGGCCGAGGAGAGGAAGAAGATGAGGGAATTGGAGAGGATGGAGGGGATTGAGGGCGGCGAGGAGGATGAGGAAGGGGAGCAGGGGAAGGGGGAGCAGAATCCGTATATGAAGATGGCAATGCAGTTCATGAGGTCCGGGGCTCGTGTTAGACGAGCTCATAATAAGAGGATGCCTCAGTATTTGGAGAGAGGTGTGGATGTCAAGTTTTCGGATGTTGCAGGGCTTGGGAAGATCAGGCTTGAGCTTGAGGAGATTGTCAAGTTCTTCACTCATGGGGAAATGTATAGGAGAAGAGGAGTTAAAATTCCAGGTGGGATACTTCTTTGTGGCCCTCCTGGAGTGGGGAAGACTTTGCTTGCAAAAGCTGTTGCTGGTGAGGCAGGCGTCAACTTCTTTTCCATTTCAGCCTCTCAATTCGTAGAGATATATGTTGGGGTTGGTGCTTCTCGTGTCCGAGCACTCTACCAGGAAGCAAAGGAAAACGCTCCATCAGTTGTCTTCATTGATGAGTTGGATGCTGTTGGAAGGGAGCGTGGTTTGATCAAGGGTTCTGGTGGACAAGAACGTGACGCAACTCTTAACCAGCTCCTGGTTTGCTTGGATGGGTTTGAAGGAAGGGGGGAAGTGATCACTATTGCTTCCACAAATAGACCAGACATTCTAGATCCAGCCCTTGTCAGACCTGGAAGGTTTGATAGGAAGATATATATCCCTAAGCCTGGTCTTATAGGTCGCATTGAAATTTTGAAGGTCCATGCGCGCAAGAAACCTATGGCTGAAGACGTGGACTATATGGCTATTGCAAGTATGAGTGATGGAATGGTTGGTGCAGAGCTTGCTAATATAGTCGAGGTTGCTGCAATCAACATGATGCCTATCAATGAAGCAGCGATGGCTGTTGTTGCTGCCAACTTTCCAGATCTGAAAAACATTGAGTTTGTGACAATTGCTCCTAGAGCTGGTAGGGAATTGGGTTATGTTAGAATGAAGATGGATCCTATCAACTTCAAAGAGGGAACACTTACTCGACAATCCCTACTGGATCATATTACCGTTCAACTAGCACCACGTGCAGCTGATGAACTTTGGTTTGGTGAGGGTCAGTTAAGTACAATTTGGGCTGAAACAGCAGACAATGCTAGGTCAGCTGCACGGACGTATGTTCTTGGTGGCCTTTCTGAGAAGAATTATGGTCTATCTAATTTCTGGGTGGCAGATCGACTCAATGACCTCGATGTGCAGGCATTGCGGATTGTCAACATGTGTTATGAACGTGCAAAAGAGATACTGGAGCAGAACCGAAAACTCATGGATGCTGTGGTCGATGAACTTGTTAAGAAGAAGAGTCTGACCAAACAAGATTTCTTTAACCTCGTAGAGTTACATGGTTCCCTTAAACCTGCGCCACCTAGTTTACTTGACATCCGGGCTGCCAAAAGAAAGCAGTTCCAGGACATCATGATGAAGCAAAAGGAATTAGTTTCAGGTAGTAACTTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004176 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019538 GO:0031967 GO:0031975 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0070011 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA Peptidase_M41

Protein Analysis

959

Amino Acids

107.79

Weight (kDa)

9.37

Isoelectric Point (pI)

44.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CASP_dom	PF04535	48 - 199	3.7e-36	Casparian strip membrane protein domain
AAA	PF00004	565 - 697	6.7e-43	ATPase family associated with various cellular activities (AAA)
Peptidase_M41	PF01434	753 - 915	4.4e-10	Peptidase family M41

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010069)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G16290
fragaria_vesca	FvH4_6g32150 FvH4_6g32150 FvH4_6g32150
malus_domestica	MD09G1206000.v1.1
prunus_persica	Prupe.3G061400_v2.0.a1 Prupe.3G065400_v2.0.a1
pyrus_communis	pycom09g12280
rosa_chinensis	RchiOBHm_Chr2g0140041
rosa_laevigata	RLG00000019844
rosa_multiflora	Rmu_co8464017.1_g000001 Rmu_co8471751.1_g000001 Rmu_sc0010982.1_g000001
rosa_roxburghii	Rroxscaffold_2G00105120
rosa_rugosa	Rorug02G0360600 Rorug02G0360700
rosa_samantha	Rh2AG411300 Rh2BG421500 Rh2CG397400 Rh2DG431000
rosa_wichuraiana	Rw2G033690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	818
Acc36I	ACCTGC	1 cut(s)	2785
AccB1I	GGYRCC	2 cut(s)	122, 931
AccB7I	CCANNNNNTGG	1 cut(s)	1966
AccII	CGCG	3 cut(s)	720, 1274, 2137
AccIII	TCCGGA	1 cut(s)	470
AclWI	GGATC	8 cut(s)	364, 432, 653, 764, 2036, 2366, 2379, 2427
AcoI	YGGCCR	5 cut(s)	10, 42, 600, 969, 1266
AcsI	RAATTY	3 cut(s)	520, 1680, 2118
AcuI	CTGAAG	1 cut(s)	2175
AcvI	CACGTG	1 cut(s)	2447
AcyI	GRCGYC	3 cut(s)	123, 179, 1761
AdeI	CACNNNGTG	1 cut(s)	2447
AfaI	GTAC	3 cut(s)	85, 944, 2488
AfiI	CCNNNNNNNGG	8 cut(s)	132, 598, 1278, 1386, 1718, 1966, 2096, 2336
AflII	CTTAAG	1 cut(s)	583
AflIII	ACRYGT	1 cut(s)	2637
AgeI	ACCGGT	1 cut(s)	781
AjiI	CACGTC	2 cut(s)	145, 2161
AjuI	GAANNNNNNNTTGG	6 cut(s)	260, 292, 2451, 2483, 2723, 2755
AloI	GAACNNNNNNTCC	2 cut(s)	637, 669
Alw21I	GWGCWC	2 cut(s)	1534, 1837
Alw26I	GTCTC	3 cut(s)	381, 671, 682
AlwI	GGATC	8 cut(s)	364, 432, 653, 764, 2036, 2366, 2379, 2427
AlwNI	CAGNNNCTG	1 cut(s)	1966
Aor13HI	TCCGGA	1 cut(s)	470
ApoI	RAATTY	3 cut(s)	520, 1680, 2118
AsiGI	ACCGGT	1 cut(s)	781
AspLEI	GCGC	9 cut(s)	125, 151, 196, 455, 819, 1276, 2137, 2139, 2782
AspS9I	GGNCC	7 cut(s)	273, 784, 1119, 1239, 1509, 1706, 2128
AsuC2I	CCSGG	3 cut(s)	753, 1513, 2804
AsuHPI	GGTGA	4 cut(s)	16, 202, 1763, 2483
AsuII	TTCGAA	2 cut(s)	291, 1259
AvaII	GGWCC	4 cut(s)	273, 784, 1509, 2128
AxyI	CCTNAGG	1 cut(s)	161
BalI	TGGCCA	2 cut(s)	602, 1268
BamHI	GGATCC	1 cut(s)	2371
BanI	GGYRCC	2 cut(s)	122, 931
BanII	GRGCYC	2 cut(s)	1519, 1534
BarI	GAAGNNNNNNTAC	2 cut(s)	935, 967
BauI	CACGAG	2 cut(s)	1518, 1824
BbrPI	CACGTG	1 cut(s)	2447
BbsI	GAAGAC	3 cut(s)	1730, 1867, 2163
Bbv12I	GWGCWC	2 cut(s)	1534, 1837
BbvCI	CCTCAGC	2 cut(s)	917, 1037
BceAI	ACGGC	5 cut(s)	207, 327, 814, 925, 956
BcgI	CGANNNNNNTGC	4 cut(s)	796, 830, 2216, 2250
BciVI	GTATCC	1 cut(s)	1686
BclI	TGATCA	2 cut(s)	1917, 2004
BcnI	CCSGG	3 cut(s)	753, 1513, 2804
BcoDI	GTCTC	3 cut(s)	381, 671, 682
BfaI	CTAG	7 cut(s)	360, 660, 2039, 2331, 2438, 2517, 2787
BfoI	RGCGCY	2 cut(s)	126, 197
BfrI	CTTAAG	1 cut(s)	583
BfuAI	ACCTGC	1 cut(s)	2785
BfuI	GTATCC	1 cut(s)	1686
BglI	GCCNNNNNGGC	4 cut(s)	919, 977, 1127, 1247
BglII	AGATCT	1 cut(s)	2296
BlpI	GCTNAGC	1 cut(s)	410
BmcAI	AGTACT	1 cut(s)	85
Bme18I	GGWCC	4 cut(s)	273, 784, 1509, 2128
BmgBI	CACGTC	2 cut(s)	145, 2161
BmgT120I	GGNCC	7 cut(s)	273, 784, 1119, 1239, 1509, 1706, 2128
BmiI	GGNNCC	5 cut(s)	124, 750, 933, 2373, 2767
BmrI	ACTGGG	1 cut(s)	99
BmsI	GCATC	7 cut(s)	476, 696, 1053, 1536, 1882, 2238, 2680
BmuI	ACTGGG	1 cut(s)	99
BpiI	GAAGAC	3 cut(s)	1730, 1867, 2163
BplI	GAGNNNNNCTC	6 cut(s)	361, 393, 1189, 1221, 1534, 1566
BpmI	CTGGAG	3 cut(s)	1103, 1734, 2687
Bpu10I	CCTNAGC	5 cut(s)	917, 947, 1037, 1251, 2091
Bpu1102I	GCTNAGC	1 cut(s)	410
Bpu14I	TTCGAA	2 cut(s)	291, 1259
BpuEI	CTTGAG	4 cut(s)	376, 716, 1637, 1643
BpuMI	CCSGG	3 cut(s)	753, 1513, 2804
BsaAI	YACGTR	1 cut(s)	2447
BsaBI	GATNNNNATC	2 cut(s)	2084, 2252
BsaHI	GRCGYC	3 cut(s)	123, 179, 1761
BsaI	GGTCTC	1 cut(s)	671
BsaJI	CCNNGG	6 cut(s)	51, 752, 972, 1374, 1380, 1512
BsaWI	WCCGGW	2 cut(s)	470, 781
BsaXI	ACNNNNNCTCC	2 cut(s)	2311, 2341
Bsc4I	CCNNNNNNNGG	8 cut(s)	132, 598, 1278, 1386, 1718, 1966, 2096, 2336
Bse118I	RCCGGY	4 cut(s)	8, 781, 967, 1003
Bse1I	ACTGG	3 cut(s)	94, 2421, 2670
Bse21I	CCTNAGG	1 cut(s)	161
Bse3DI	GCAATG	4 cut(s)	450, 555, 1500, 2621
Bse8I	GATNNNNATC	2 cut(s)	2084, 2252
BseAI	TCCGGA	1 cut(s)	470
BseDI	CCNNGG	6 cut(s)	51, 752, 972, 1374, 1380, 1512
BseJI	GATNNNNATC	2 cut(s)	2084, 2252
BseLI	CCNNNNNNNGG	8 cut(s)	132, 598, 1278, 1386, 1718, 1966, 2096, 2336
BseMI	GCAATG	4 cut(s)	450, 555, 1500, 2621
BseNI	ACTGG	3 cut(s)	94, 2421, 2670
BsePI	GCGCGC	1 cut(s)	2135
BseX3I	CGGCCG	2 cut(s)	10, 969
BseYI	CCCAGC	3 cut(s)	216, 419, 1276
BsgI	GTGCAG	4 cut(s)	2226, 2469, 2511, 2636
Bsh1236I	CGCG	3 cut(s)	720, 1274, 2137
Bsh1285I	CGRYCG	2 cut(s)	13, 972
BshNI	GGYRCC	2 cut(s)	122, 931
BshTI	ACCGGT	1 cut(s)	781
BsiEI	CGRYCG	2 cut(s)	13, 972
BsiHKAI	GWGCWC	2 cut(s)	1534, 1837
BslI	CCNNNNNNNGG	8 cut(s)	132, 598, 1278, 1386, 1718, 1966, 2096, 2336
BsmAI	GTCTC	3 cut(s)	381, 671, 682
BsmBI	CGTCTC	1 cut(s)	682
BsmI	GAATGC	1 cut(s)	969
Bso31I	GGTCTC	1 cut(s)	671
Bsp119I	TTCGAA	2 cut(s)	291, 1259
Bsp1286I	GDGCHC	3 cut(s)	1519, 1534, 1837
Bsp13I	TCCGGA	1 cut(s)	470
Bsp1720I	GCTNAGC	1 cut(s)	410
BspEI	TCCGGA	1 cut(s)	470
BspFNI	CGCG	3 cut(s)	720, 1274, 2137
BspHI	TCATGA	2 cut(s)	1503, 2835
BspLI	GGNNCC	5 cut(s)	124, 750, 933, 2373, 2767
BspMI	ACCTGC	1 cut(s)	2785
BspPI	GGATC	8 cut(s)	364, 432, 653, 764, 2036, 2366, 2379, 2427
BspT104I	TTCGAA	2 cut(s)	291, 1259
BspT107I	GGYRCC	2 cut(s)	122, 931
BspTI	CTTAAG	1 cut(s)	583
BspTNI	GGTCTC	1 cut(s)	671
BsrDI	GCAATG	4 cut(s)	450, 555, 1500, 2621
BsrFI	RCCGGY	4 cut(s)	8, 781, 967, 1003
BsrI	ACTGG	3 cut(s)	94, 2421, 2670
BssAI	RCCGGY	4 cut(s)	8, 781, 967, 1003
BssECI	CCNNGG	6 cut(s)	51, 752, 972, 1374, 1380, 1512
BssHII	GCGCGC	1 cut(s)	2135
BssNI	GRCGYC	3 cut(s)	123, 179, 1761
BssSI	CACGAG	2 cut(s)	1518, 1824
BssT1I	CCWWGG	1 cut(s)	51
Bst2BI	CACGAG	2 cut(s)	1518, 1824
Bst4CI	ACNGT	6 cut(s)	232, 245, 325, 823, 1312, 2431
Bst6I	CTCTTC	2 cut(s)	1663, 2714
BstACI	GRCGYC	3 cut(s)	123, 179, 1761
BstAFI	CTTAAG	1 cut(s)	583
BstAPI	GCANNNNNTGC	4 cut(s)	2213, 2447, 2513, 2623
BstBAI	YACGTR	1 cut(s)	2447
BstBI	TTCGAA	2 cut(s)	291, 1259
BstDSI	CCRYGG	1 cut(s)	972
BstEII	GGTNACC	2 cut(s)	4, 208
BstFNI	CGCG	3 cut(s)	720, 1274, 2137
BstH2I	RGCGCY	2 cut(s)	126, 197
BstHHI	GCGC	9 cut(s)	125, 151, 196, 455, 819, 1276, 2137, 2139, 2782
BstMAI	GTCTC	3 cut(s)	381, 671, 682
BstMCI	CGRYCG	2 cut(s)	13, 972
BstNSI	RCATGY	3 cut(s)	155, 740, 2641
BstPI	GGTNACC	2 cut(s)	4, 208
BstUI	CGCG	3 cut(s)	720, 1274, 2137
BstV2I	GAAGAC	3 cut(s)	1730, 1867, 2163
BstX2I	RGATCY	4 cut(s)	356, 2041, 2296, 2371
BstXI	CCANNNNNNTGG	2 cut(s)	58, 1276
BstYI	RGATCY	4 cut(s)	356, 2041, 2296, 2371
BstZI	CGGCCG	2 cut(s)	10, 969
Bsu36I	CCTNAGG	1 cut(s)	161
BsuI	GTATCC	1 cut(s)	1686
BtgI	CCRYGG	1 cut(s)	972
BtgZI	GCGATG	1 cut(s)	2282
BtrI	CACGTC	2 cut(s)	145, 2161
BveI	ACCTGC	1 cut(s)	2785
CaiI	CAGNNNCTG	1 cut(s)	1966
CciI	TCATGA	2 cut(s)	1503, 2835
CfoI	GCGC	9 cut(s)	125, 151, 196, 455, 819, 1276, 2137, 2139, 2782
Cfr10I	RCCGGY	4 cut(s)	8, 781, 967, 1003
Cfr13I	GGNCC	7 cut(s)	273, 784, 1119, 1239, 1509, 1706, 2128
CseI	GACGC	4 cut(s)	168, 883, 1750, 1955
Csp6I	GTAC	3 cut(s)	84, 943, 2487
CspAI	ACCGGT	1 cut(s)	781
CviQI	GTAC	3 cut(s)	84, 943, 2487
DinI	GGCGCC	1 cut(s)	124
DraIII	CACNNNGTG	1 cut(s)	2447
EaeI	YGGCCR	5 cut(s)	10, 42, 600, 969, 1266
EagI	CGGCCG	2 cut(s)	10, 969
Eam1104I	CTCTTC	2 cut(s)	1663, 2714
EarI	CTCTTC	2 cut(s)	1663, 2714
EciI	GGCGGA	1 cut(s)	1046
Ecl136II	GAGCTC	1 cut(s)	1532
EclXI	CGGCCG	2 cut(s)	10, 969
Eco130I	CCWWGG	1 cut(s)	51
Eco24I	GRGCYC	2 cut(s)	1519, 1534
Eco31I	GGTCTC	1 cut(s)	671
Eco47I	GGWCC	4 cut(s)	273, 784, 1509, 2128
Eco52I	CGGCCG	2 cut(s)	10, 969
Eco53kI	GAGCTC	1 cut(s)	1532
Eco57I	CTGAAG	1 cut(s)	2175
Eco72I	CACGTG	1 cut(s)	2447
Eco81I	CCTNAGG	1 cut(s)	161
Eco91I	GGTNACC	2 cut(s)	4, 208
EcoICRI	GAGCTC	1 cut(s)	1532
EcoO65I	GGTNACC	2 cut(s)	4, 208
EcoT14I	CCWWGG	1 cut(s)	51
EcoT38I	GRGCYC	2 cut(s)	1519, 1534
EgeI	GGCGCC	1 cut(s)	124
EheI	GGCGCC	1 cut(s)	124
ErhI	CCWWGG	1 cut(s)	51
Esp3I	CGTCTC	1 cut(s)	682
FalI	AAGNNNNNCTT	4 cut(s)	260, 292, 863, 895
FauNDI	CATATG	1 cut(s)	439
FbaI	TGATCA	2 cut(s)	1917, 2004
FriOI	GRGCYC	2 cut(s)	1519, 1534
FspBI	CTAG	7 cut(s)	360, 660, 2039, 2331, 2438, 2517, 2787
FspI	TGCGCA	1 cut(s)	818
GlaI	GCGC	9 cut(s)	124, 150, 195, 454, 818, 1275, 2136, 2138, 2781
GsaI	CCCAGC	3 cut(s)	220, 423, 1280
GsuI	CTGGAG	3 cut(s)	1103, 1734, 2687
HaeII	RGCGCY	2 cut(s)	126, 197
HgaI	GACGC	4 cut(s)	168, 883, 1750, 1955
HhaI	GCGC	9 cut(s)	125, 151, 196, 455, 819, 1276, 2137, 2139, 2782
Hin1I	GRCGYC	3 cut(s)	123, 179, 1761
Hin6I	GCGC	9 cut(s)	123, 149, 194, 453, 817, 1274, 2135, 2137, 2780
HinP1I	GCGC	9 cut(s)	123, 149, 194, 453, 817, 1274, 2135, 2137, 2780
HincII	GTYRAC	3 cut(s)	898, 1765, 2635
HindII	GTYRAC	3 cut(s)	898, 1765, 2635
HphI	GGTGA	4 cut(s)	16, 202, 1763, 2483
Hpy166II	GTNNAC	8 cut(s)	262, 530, 898, 1765, 1934, 2164, 2635, 2792
Hpy8I	GTNNAC	8 cut(s)	262, 530, 898, 1765, 1934, 2164, 2635, 2792
Hpy99I	CGWCG	6 cut(s)	28, 35, 677, 803, 835, 1190
HpyCH4III	ACNGT	6 cut(s)	232, 245, 325, 823, 1312, 2431
HpyCH4IV	ACGT	7 cut(s)	23, 144, 1942, 2160, 2446, 2534, 2650
HpySE526I	ACGT	7 cut(s)	23, 144, 1942, 2160, 2446, 2534, 2650
Hsp92I	GRCGYC	3 cut(s)	123, 179, 1761
HspAI	GCGC	9 cut(s)	123, 149, 194, 453, 817, 1274, 2135, 2137, 2780
KasI	GGCGCC	1 cut(s)	122
Kpn2I	TCCGGA	1 cut(s)	470
KroI	GCCGGC	2 cut(s)	967, 1003
KroNI	GCCGGC	2 cut(s)	969, 1005
Ksp22I	TGATCA	2 cut(s)	1917, 2004
LweI	GCATC	7 cut(s)	476, 696, 1053, 1536, 1882, 2238, 2680
MaeI	CTAG	7 cut(s)	360, 660, 2039, 2331, 2438, 2517, 2787
MaeII	ACGT	7 cut(s)	23, 144, 1942, 2160, 2446, 2534, 2650
MfeI	CAATTG	1 cut(s)	2322
MflI	RGATCY	4 cut(s)	356, 2041, 2296, 2371
MhlI	GDGCHC	3 cut(s)	1519, 1534, 1837
MlsI	TGGCCA	2 cut(s)	602, 1268
MluNI	TGGCCA	2 cut(s)	602, 1268
Mly113I	GGCGCC	1 cut(s)	123
MlyI	GAGTC	5 cut(s)	56, 293, 1199, 2592, 2731
MmeI	TCCRAC	3 cut(s)	623, 1869, 1879
Mox20I	TGGCCA	2 cut(s)	602, 1268
MroI	TCCGGA	1 cut(s)	470
MroNI	GCCGGC	2 cut(s)	967, 1003
MscI	TGGCCA	2 cut(s)	602, 1268
MseI	TTAA	9 cut(s)	584, 629, 744, 1677, 1956, 2483, 2712, 2745, 2772
MslI	CAYNNNNRTG	1 cut(s)	2837
Msp20I	TGGCCA	2 cut(s)	602, 1268
MspA1I	CMGCKG	5 cut(s)	317, 464, 916, 2453, 2525
MspCI	CTTAAG	1 cut(s)	583
MunI	CAATTG	1 cut(s)	2322
Mva1269I	GAATGC	1 cut(s)	969
MvnI	CGCG	3 cut(s)	720, 1274, 2137
NaeI	GCCGGC	2 cut(s)	969, 1005
NarI	GGCGCC	1 cut(s)	123
NciI	CCSGG	3 cut(s)	753, 1513, 2804
NdeI	CATATG	1 cut(s)	439
NgoMIV	GCCGGC	2 cut(s)	967, 1003
NlaIV	GGNNCC	5 cut(s)	124, 750, 933, 2373, 2767
NmeAIII	GCCGAG	4 cut(s)	70, 99, 1399, 1405
NmuCI	GTSAC	9 cut(s)	4, 187, 208, 232, 307, 319, 842, 1943, 2317
NsbI	TGCGCA	1 cut(s)	818
NspI	RCATGY	3 cut(s)	155, 740, 2641
NspV	TTCGAA	2 cut(s)	291, 1259
PagI	TCATGA	2 cut(s)	1503, 2835
PauI	GCGCGC	1 cut(s)	2135
PciI	ACATGT	1 cut(s)	2637
PcsI	WCGNNNNNNNCGW	2 cut(s)	197, 1525
PctI	GAATGC	1 cut(s)	969
PdiI	GCCGGC	2 cut(s)	969, 1005
PfeI	GAWTC	8 cut(s)	385, 397, 487, 498, 722, 803, 1256, 1474
PflFI	GACNNNGTC	1 cut(s)	103
PflMI	CCANNNNNTGG	1 cut(s)	1966
PfoI	TCCNGGA	2 cut(s)	1711, 2826
PinAI	ACCGGT	1 cut(s)	781
PleI	GAGTC	5 cut(s)	55, 292, 1198, 2592, 2730
PluTI	GGCGCC	1 cut(s)	126
PmaCI	CACGTG	1 cut(s)	2447
PmlI	CACGTG	1 cut(s)	2447
PpsI	GAGTC	5 cut(s)	55, 292, 1198, 2592, 2730
Ppu21I	YACGTR	1 cut(s)	2447
PscI	ACATGT	1 cut(s)	2637
Psp124BI	GAGCTC	1 cut(s)	1534
PspCI	CACGTG	1 cut(s)	2447
PspEI	GGTNACC	2 cut(s)	4, 208
PspFI	CCCAGC	3 cut(s)	216, 419, 1276
PspN4I	GGNNCC	5 cut(s)	124, 750, 933, 2373, 2767
PspPI	GGNCC	7 cut(s)	273, 784, 1119, 1239, 1509, 1706, 2128
PstNI	CAGNNNCTG	1 cut(s)	1966
PsuI	RGATCY	4 cut(s)	356, 2041, 2296, 2371
PsyI	GACNNNGTC	1 cut(s)	103
PteI	GCGCGC	1 cut(s)	2135
PvuII	CAGCTG	4 cut(s)	317, 464, 2453, 2525
RsaI	GTAC	3 cut(s)	85, 944, 2488
RsaNI	GTAC	3 cut(s)	84, 943, 2487
RseI	CAYNNNNRTG	1 cut(s)	2837
SacI	GAGCTC	1 cut(s)	1534
SaqAI	TTAA	9 cut(s)	584, 629, 744, 1677, 1956, 2483, 2712, 2745, 2772
Sau96I	GGNCC	7 cut(s)	273, 784, 1119, 1239, 1509, 1706, 2128
ScaI	AGTACT	1 cut(s)	85
SchI	GAGTC	5 cut(s)	56, 293, 1199, 2592, 2731
SduI	GDGCHC	3 cut(s)	1519, 1534, 1837
SfaNI	GCATC	7 cut(s)	476, 696, 1053, 1536, 1882, 2238, 2680
SfoI	GGCGCC	1 cut(s)	124
SfuI	TTCGAA	2 cut(s)	291, 1259
SinI	GGWCC	4 cut(s)	273, 784, 1509, 2128
SmiMI	CAYNNNNRTG	1 cut(s)	2837
SmlI	CTYRAG	5 cut(s)	391, 583, 731, 1616, 1622
SmoI	CTYRAG	5 cut(s)	391, 583, 731, 1616, 1622
SspDI	GGCGCC	1 cut(s)	122
SspI	AATATT	1 cut(s)	622
SspMI	CTAG	7 cut(s)	360, 660, 2039, 2331, 2438, 2517, 2787
SstI	GAGCTC	1 cut(s)	1534
StyI	CCWWGG	1 cut(s)	51
TaaI	ACNGT	6 cut(s)	232, 245, 325, 823, 1312, 2431
TaiI	ACGT	7 cut(s)	26, 147, 1945, 2163, 2449, 2537, 2653
TatI	WGTACW	2 cut(s)	83, 2486
TauI	GCSGC	6 cut(s)	769, 913, 916, 925, 1031, 1434
TfiI	GAWTC	8 cut(s)	385, 397, 487, 498, 722, 803, 1256, 1474
Tru1I	TTAA	9 cut(s)	584, 629, 744, 1677, 1956, 2483, 2712, 2745, 2772
Tru9I	TTAA	9 cut(s)	584, 629, 744, 1677, 1956, 2483, 2712, 2745, 2772
TseFI	GTSAC	9 cut(s)	4, 187, 208, 232, 307, 319, 842, 1943, 2317
Tsp45I	GTSAC	9 cut(s)	4, 187, 208, 232, 307, 319, 842, 1943, 2317
TspGWI	ACGGA	4 cut(s)	81, 175, 1467, 2545
Tth111I	GACNNNGTC	1 cut(s)	103
Van91I	CCANNNNNTGG	1 cut(s)	1966
Vha464I	CTTAAG	1 cut(s)	583
VpaK11BI	GGWCC	4 cut(s)	273, 784, 1509, 2128
XapI	RAATTY	3 cut(s)	520, 1680, 2118
XbaI	TCTAGA	1 cut(s)	2038
XceI	RCATGY	3 cut(s)	155, 740, 2641
XspI	CTAG	7 cut(s)	360, 660, 2039, 2331, 2438, 2517, 2787
ZrmI	AGTACT	1 cut(s)	85

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.