Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0010069

Physical Location & Seq

Genomic Coordinates Reverse (-)

55074608 .. 55080333

Gene Structure 5726 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G033690.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2406 bp

ATGGCCTGCCAATGCCTTCTGGGCTCTTATTCATCTTCCTCCCTACCCCCAAACCCCAGCCCCAAAACCCCTAAAACCCCACCCAAATCCAGAATCCCCTCCTCCATTTCCTCCCACCTTTCTCCCACTTCCGATAACGAAGAAAACGATAAAACCAAGAGCCCCAATTTCGATTTCCTCAAGCTCTCCGTAACTCTAACCGTCATCTCCGCCTCTCTCCCCCAAACCCCAACCTCACGCGCCGCCGTCAAGGAGAAAAAGCCACGCGCCCCCAAGAAATCCTCCACTTCTAGAAAGTCCGAAGCTTTATCTCCTCAAGAGCTCAAATCCTGGTCCCAAGGTCTCCCCCTCCTCGAATTGAACGGGGAATCGAAGCTCAAGCATGTAATCAAGCCTCCGGCGATCGAATTGCGGCAGAAGGCCGAGCCGGTCCTGGTGGTTCTTGAAGATTCCAGAGTGCTGCGCACCGTTTTGCCGTCACCGGAGACTGACAAGAGGTTCTGGGAGGAATGGGAGAAGTTGAATTTGGACTCTTTGTGCGTCAACGCCTACACGCCGCCGCTGAGGCCGCCGGAGGTGCCTATGCCAGGAGGAAGAAGAAGCACGACGAGTCTTGAGGGAGGCTCGCCGGAATTACTTGCAGATGGCAATGTGTGGGCCAATTTGGCTCAGGATTCGAATGTGGCCACCGCGCTGGGGCTGGTGTTCTTTTACATTTTTTACAGGACTGTGGTGCTTAGTTATAGGAGGCAGAAAAAGGATTATGAGGACAGGTTGAAGATTGAGCAGGCCGAGGCCGAGGAGAGGAAGAAGATGAGGGATTTGGAGAGGATGGAGGGGATAGAGGGCGGCGAGGAGGATGAGGAAGGGGAGCAGGGGAAGGGGGAGCAGAATCCTTATATGAAGATGGCAATGCAGTTCATGAGGTCCGGGGCTCGTGTGAGACGAGCTCATAATAAGAGGATGCCTCAGTATTTGGAGAGAGGTGTGGATGTCAAGTTTTCGGATGTTGCTGGACTTGGGAAGATCAGGCTTGAGCTTGAGGAGATTGTCAAGTTCTTCACTCATGGGGAAATGTATAGGAGAAGAGGAGTTAAAATTCCAGGTGGGATACTTCTTTGTGGCCCTCCTGGAGTGGGGAAGACTTTGCTTGCAAAAGCTGTTGCTGGTGAGGCAGGTGTCAACTTCTTTTCCATTTCGGCCTCTCAATTCGTAGAGATATATGTTGGGGTTGGTGCTTCTCGTGTCCGAGCACTCTACCAGGAAGCAAAGGAAAACGCTCCATCAGTTGTCTTCATTGATGAGTTGGATGCTGTTGGAAGGGAGCGTGGTTTGATCAAGGGTTCTGGTGGACAAGAACGTGATGCAACTCTTAACCAGCTCCTGGTTTGTTTGGATGGATTTGAAGGAAGGGGGGAAGTGATCACTATTGCTTCCACAAATAGACCAGACATTCTAGATCCAGCCCTTGTCAGACCTGGAAGGTTTGATCGGAAGATATATATCCCTAAGCCTGGTCTTATAGGTCGCATTGAAATTTTGAAGGTCCATGCGCGCAAGAAACCTATGGCGGAAGATGTGGACTATATGGCTATTGCAAGTATGAGTGATGGAATGGTTGGTGCAGAGCTAGCTAATATAGTTGAGGTTGCTGCAATCAACATGATGCGTGATGGAAGAACTGAGATTACTACTGATGACCTATTACAAGCTGCACAAATGGAAGAAAGAGGAATGCTAGATAGAAAGGACAGAAGTTTTGATACATGGAAGCAAGTAGCTATCAATGAAGCAGCGATGGCTGTTGTTGCTGCAAACTTTCCTGATCTGAAAAACATTGAGTTTGTCACAATTGCTCCTAGAGCTGGTAGGGAATTGGGTTATGTTAGAATGAAGATGGATCCTATCAACTTCAAAGAGGGAACACTTACTCGACAATCCCTACTGGATCATATTACTGTTCAACTAGCACCACGTGCAGCCGATGAACTTTGGTTTGGTGAGGGTCAGTTAAGTACAATATGGGCTGAAACAGCAGACAATGCTAGGTCAGCTGCACGGACGTATGTTCTTGGTGGCCTTTCTGAGAAGAATTATGGTCTATCTAATTTCTGGGTGGCAGATCGACTCAATGACCTCGATGTGCAGGCATTGCGGATTGTCAACATGTGTTATGAACGCGCAAAAGAGATTCTGGAGCAGAACCGAAAGCTCATGGATGCTGTCGTCGATGAACTTGTTAAGAAGAAGAGTTTGACCAAACAAGATTTCTTTGACCTCATTGAGTTACATGGTTCCCTCAAACCTGTGCCACCTAGTTTACTTGACATCCGGGCTGCCAAAAGAAAGGAGTTCCAGGACATGATGATGAAGCAAAAGGAATTAGTTTCAGGTAGTAACTTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004176 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019538 GO:0031967 GO:0031975 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0070011 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA Peptidase_M41

Protein Analysis

801

Amino Acids

89.25

Weight (kDa)

8.41

Isoelectric Point (pI)

45.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA	PF00004	371 - 503	5.1e-43	ATPase family associated with various cellular activities (AAA)
AAA_lid_3	PF17862	526 - 569	3.5e-10	AAA+ lid domain
Peptidase_M41	PF01434	591 - 757	1.3e-11	Peptidase family M41

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010069)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G16290
fragaria_vesca	FvH4_6g32150 FvH4_6g32150 FvH4_6g32150
malus_domestica	MD09G1206000.v1.1
prunus_persica	Prupe.3G061400_v2.0.a1 Prupe.3G065400_v2.0.a1
pyrus_communis	pycom09g12280
rosa_chinensis	RchiOBHm_Chr2g0140041
rosa_laevigata	RLG00000019844
rosa_multiflora	Rmu_co8464017.1_g000001 Rmu_co8471751.1_g000001 Rmu_sc0010982.1_g000001
rosa_roxburghii	Rroxscaffold_2G00105120
rosa_rugosa	Rorug02G0360600 Rorug02G0360700
rosa_samantha	Rh2AG411300 Rh2BG421500 Rh2CG397400 Rh2DG431000
rosa_wichuraiana	Rw2G033690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1166
Acc16I	TGCGCA	1 cut(s)	464
Acc36I	ACCTGC	1 cut(s)	1166
AccB1I	GGYRCC	1 cut(s)	577
AccB7I	CCANNNNNTGG	1 cut(s)	1384
AccII	CGCG	5 cut(s)	240, 267, 692, 1555, 2181
AclWI	GGATC	4 cut(s)	1454, 1895, 1908, 1956
AcoI	YGGCCR	1 cut(s)	684
AcsI	RAATTY	3 cut(s)	523, 1098, 1536
AcvI	CACGTG	1 cut(s)	1976
AdeI	CACNNNGTG	1 cut(s)	1976
AfaI	GTAC	1 cut(s)	2017
AfiI	CCNNNNNNNGG	7 cut(s)	587, 696, 804, 1136, 1384, 1514, 1865
AflIII	ACRYGT	1 cut(s)	2166
AgsI	TTSAA	9 cut(s)	361, 446, 523, 778, 1406, 1535, 1543, 1915, 1964
AjuI	GAANNNNNNNTTGG	8 cut(s)	158, 190, 509, 541, 1980, 2012, 2252, 2284
Alw21I	GWGCWC	3 cut(s)	324, 952, 1255
Alw26I	GTCTC	3 cut(s)	347, 479, 937
AlwI	GGATC	4 cut(s)	1454, 1895, 1908, 1956
AlwNI	CAGNNNCTG	1 cut(s)	1384
ApeKI	GCWGC	8 cut(s)	460, 1652, 1712, 1793, 1811, 1979, 2054, 2336
ApoI	RAATTY	3 cut(s)	523, 1098, 1536
ArsI	GACNNNNNNTTYG	2 cut(s)	1742, 1774
AspLEI	GCGC	7 cut(s)	242, 269, 465, 694, 1555, 1557, 2183
AspS9I	GGNCC	6 cut(s)	333, 430, 657, 927, 1124, 1546
AsuC2I	CCSGG	2 cut(s)	931, 2333
AsuHPI	GGTGA	3 cut(s)	471, 1181, 2012
AsuII	TTCGAA	1 cut(s)	677
AsuNHI	GCTAGC	1 cut(s)	1630
AvaII	GGWCC	4 cut(s)	333, 430, 927, 1546
BalI	TGGCCA	1 cut(s)	686
BamHI	GGATCC	1 cut(s)	1900
BanI	GGYRCC	1 cut(s)	577
BanII	GRGCYC	5 cut(s)	26, 164, 324, 937, 952
BarI	GAAGNNNNNNTAC	2 cut(s)	1747, 1779
BauI	CACGAG	2 cut(s)	936, 1242
BbrPI	CACGTG	1 cut(s)	1976
BbsI	GAAGAC	2 cut(s)	1148, 1285
Bbv12I	GWGCWC	3 cut(s)	324, 952, 1255
BbvCI	CCTCAGC	1 cut(s)	563
BbvI	GCAGC	8 cut(s)	447, 1639, 1699, 1798, 1805, 1991, 2041, 2323
BccI	CCATC	9 cut(s)	638, 826, 901, 1291, 1391, 1604, 1667, 1792, 1891
BceAI	ACGGC	2 cut(s)	230, 460
BcgI	CGANNNNNNTGC	2 cut(s)	391, 425
BciVI	GTATCC	1 cut(s)	1104
BclI	TGATCA	2 cut(s)	1335, 1422
BcnI	CCSGG	2 cut(s)	931, 2333
BcoDI	GTCTC	3 cut(s)	347, 479, 937
BfaI	CTAG	8 cut(s)	291, 1457, 1631, 1739, 1860, 1967, 2046, 2316
BfuAI	ACCTGC	1 cut(s)	1166
BfuI	GTATCC	1 cut(s)	1104
BglI	GCCNNNNNGGC	3 cut(s)	21, 565, 665
Bme18I	GGWCC	4 cut(s)	333, 430, 927, 1546
BmgT120I	GGNCC	6 cut(s)	333, 430, 657, 927, 1124, 1546
BmiI	GGNNCC	4 cut(s)	335, 579, 1902, 2296
BmsI	GCATC	5 cut(s)	954, 1300, 1354, 1656, 2209
BmtI	GCTAGC	1 cut(s)	1634
BpiI	GAAGAC	2 cut(s)	1148, 1285
BplI	GAGNNNNNCTC	6 cut(s)	608, 640, 934, 966, 952, 984
BpmI	CTGGAG	2 cut(s)	1152, 2216
Bpu10I	CCTNAGC	3 cut(s)	563, 669, 1509
Bpu14I	TTCGAA	1 cut(s)	677
BpuEI	CTTGAG	6 cut(s)	164, 300, 362, 635, 1055, 1061
BpuMI	CCSGG	2 cut(s)	931, 2333
BsaAI	YACGTR	1 cut(s)	1976
BsaBI	GATNNNNATC	1 cut(s)	1502
BsaI	GGTCTC	1 cut(s)	347
BsaJI	CCNNGG	4 cut(s)	337, 792, 798, 930
BsaWI	WCCGGW	1 cut(s)	481
BsaXI	ACNNNNNCTCC	2 cut(s)	1840, 1870
Bsc4I	CCNNNNNNNGG	7 cut(s)	587, 696, 804, 1136, 1384, 1514, 1865
Bse118I	RCCGGY	1 cut(s)	427
Bse1I	ACTGG	1 cut(s)	1950
Bse3DI	GCAATG	3 cut(s)	655, 918, 2150
Bse8I	GATNNNNATC	1 cut(s)	1502
BseDI	CCNNGG	4 cut(s)	337, 792, 798, 930
BseGI	GGATG	9 cut(s)	837, 865, 969, 997, 1012, 1315, 1402, 2224, 2328
BseJI	GATNNNNATC	1 cut(s)	1502
BseLI	CCNNNNNNNGG	7 cut(s)	587, 696, 804, 1136, 1384, 1514, 1865
BseMI	GCAATG	3 cut(s)	655, 918, 2150
BseMII	CTCAG	5 cut(s)	554, 683, 983, 1674, 2076
BseNI	ACTGG	1 cut(s)	1950
BsePI	GCGCGC	1 cut(s)	1553
BseRI	GAGGAG	7 cut(s)	91, 303, 341, 815, 869, 1058, 1104
BseXI	GCAGC	8 cut(s)	447, 1639, 1699, 1798, 1805, 1991, 2041, 2323
BseYI	CCCAGC	2 cut(s)	56, 694
BsgI	GTGCAG	5 cut(s)	1644, 1698, 1998, 2040, 2165
Bsh1236I	CGCG	5 cut(s)	240, 267, 692, 1555, 2181
Bsh1285I	CGRYCG	1 cut(s)	405
BshNI	GGYRCC	1 cut(s)	577
BsiEI	CGRYCG	1 cut(s)	405
BsiHKAI	GWGCWC	3 cut(s)	324, 952, 1255
BsiSI	CCGG	7 cut(s)	398, 428, 482, 572, 629, 930, 2332
BslFI	GGGAC	1 cut(s)	319
BslI	CCNNNNNNNGG	7 cut(s)	587, 696, 804, 1136, 1384, 1514, 1865
BsmAI	GTCTC	3 cut(s)	347, 479, 937
BsmBI	CGTCTC	1 cut(s)	937
BsmFI	GGGAC	1 cut(s)	319
BsmI	GAATGC	1 cut(s)	1740
Bso31I	GGTCTC	1 cut(s)	347
Bsp119I	TTCGAA	1 cut(s)	677
Bsp1286I	GDGCHC	6 cut(s)	26, 164, 324, 937, 952, 1255
BspCNI	CTCAG	5 cut(s)	555, 682, 982, 1675, 2077
BspFNI	CGCG	5 cut(s)	240, 267, 692, 1555, 2181
BspHI	TCATGA	1 cut(s)	921
BspLI	GGNNCC	4 cut(s)	335, 579, 1902, 2296
BspMI	ACCTGC	1 cut(s)	1166
BspOI	GCTAGC	1 cut(s)	1634
BspPI	GGATC	4 cut(s)	1454, 1895, 1908, 1956
BspT104I	TTCGAA	1 cut(s)	677
BspT107I	GGYRCC	1 cut(s)	577
BspTNI	GGTCTC	1 cut(s)	347
BsrDI	GCAATG	3 cut(s)	655, 918, 2150
BsrFI	RCCGGY	1 cut(s)	427
BsrI	ACTGG	1 cut(s)	1950
BssAI	RCCGGY	1 cut(s)	427
BssECI	CCNNGG	4 cut(s)	337, 792, 798, 930
BssHII	GCGCGC	1 cut(s)	1553
BssSI	CACGAG	2 cut(s)	936, 1242
BssT1I	CCWWGG	1 cut(s)	337
Bst2BI	CACGAG	2 cut(s)	936, 1242
Bst4CI	ACNGT	4 cut(s)	202, 469, 730, 1960
Bst6I	CTCTTC	2 cut(s)	1081, 2243
BstAPI	GCANNNNNTGC	3 cut(s)	1976, 2042, 2152
BstBAI	YACGTR	1 cut(s)	1976
BstBI	TTCGAA	1 cut(s)	677
BstC8I	GCNNGC	7 cut(s)	7, 626, 789, 1152, 1555, 1632, 2148
BstDEI	CTNAG	7 cut(s)	563, 669, 737, 969, 1509, 1683, 2085
BstENI	CCTNNNNNAGG	1 cut(s)	585
BstF5I	GGATG	9 cut(s)	837, 865, 969, 997, 1012, 1315, 1402, 2224, 2328
BstFNI	CGCG	5 cut(s)	240, 267, 692, 1555, 2181
BstHHI	GCGC	7 cut(s)	242, 269, 465, 694, 1555, 1557, 2183
BstMAI	GTCTC	3 cut(s)	347, 479, 937
BstMCI	CGRYCG	1 cut(s)	405
BstNSI	RCATGY	2 cut(s)	386, 2170
BstUI	CGCG	5 cut(s)	240, 267, 692, 1555, 2181
BstV1I	GCAGC	8 cut(s)	447, 1639, 1699, 1798, 1805, 1991, 2041, 2323
BstV2I	GAAGAC	2 cut(s)	1148, 1285
BstX2I	RGATCY	2 cut(s)	1459, 1900
BstXI	CCANNNNNNTGG	1 cut(s)	694
BstYI	RGATCY	2 cut(s)	1459, 1900
BsuI	GTATCC	1 cut(s)	1104
BtgZI	GCGATG	1 cut(s)	1811
BtsCI	GGATG	9 cut(s)	837, 865, 969, 997, 1012, 1315, 1402, 2224, 2328
BveI	ACCTGC	1 cut(s)	1166
Cac8I	GCNNGC	7 cut(s)	7, 626, 789, 1152, 1555, 1632, 2148
CaiI	CAGNNNCTG	1 cut(s)	1384
CciI	TCATGA	1 cut(s)	921
CfoI	GCGC	7 cut(s)	242, 269, 465, 694, 1555, 1557, 2183
Cfr10I	RCCGGY	1 cut(s)	427
Cfr13I	GGNCC	6 cut(s)	333, 430, 657, 927, 1124, 1546
CseI	GACGC	1 cut(s)	529
Csp6I	GTAC	1 cut(s)	2016
CviQI	GTAC	1 cut(s)	2016
DdeI	CTNAG	7 cut(s)	563, 669, 737, 969, 1509, 1683, 2085
DraIII	CACNNNGTG	1 cut(s)	1976
EaeI	YGGCCR	1 cut(s)	684
Eam1104I	CTCTTC	2 cut(s)	1081, 2243
EarI	CTCTTC	2 cut(s)	1081, 2243
EciI	GGCGGA	2 cut(s)	199, 1586
Ecl136II	GAGCTC	2 cut(s)	322, 950
Eco130I	CCWWGG	1 cut(s)	337
Eco24I	GRGCYC	5 cut(s)	26, 164, 324, 937, 952
Eco31I	GGTCTC	1 cut(s)	347
Eco47I	GGWCC	4 cut(s)	333, 430, 927, 1546
Eco53kI	GAGCTC	2 cut(s)	322, 950
Eco72I	CACGTG	1 cut(s)	1976
EcoICRI	GAGCTC	2 cut(s)	322, 950
EcoNI	CCTNNNNNAGG	1 cut(s)	585
EcoT14I	CCWWGG	1 cut(s)	337
EcoT38I	GRGCYC	5 cut(s)	26, 164, 324, 937, 952
ErhI	CCWWGG	1 cut(s)	337
Esp3I	CGTCTC	1 cut(s)	937
FaqI	GGGAC	1 cut(s)	319
FbaI	TGATCA	2 cut(s)	1335, 1422
FokI	GGATG	9 cut(s)	844, 872, 976, 1004, 1019, 1322, 1409, 2231, 2315
FriOI	GRGCYC	5 cut(s)	26, 164, 324, 937, 952
FspBI	CTAG	8 cut(s)	291, 1457, 1631, 1739, 1860, 1967, 2046, 2316
FspI	TGCGCA	1 cut(s)	464
GlaI	GCGC	7 cut(s)	241, 268, 464, 693, 1554, 1556, 2182
GsaI	CCCAGC	2 cut(s)	60, 698
GsuI	CTGGAG	2 cut(s)	1152, 2216
HapII	CCGG	7 cut(s)	398, 428, 482, 572, 629, 930, 2332
HgaI	GACGC	1 cut(s)	529
HhaI	GCGC	7 cut(s)	242, 269, 465, 694, 1555, 1557, 2183
Hin6I	GCGC	7 cut(s)	240, 267, 463, 692, 1553, 1555, 2181
HinP1I	GCGC	7 cut(s)	240, 267, 463, 692, 1553, 1555, 2181
HincII	GTYRAC	3 cut(s)	544, 1183, 2164
HindII	GTYRAC	3 cut(s)	544, 1183, 2164
HindIII	AAGCTT	1 cut(s)	303
HinfI	GANTC	9 cut(s)	93, 368, 449, 530, 610, 674, 892, 2127, 2191
HpaII	CCGG	7 cut(s)	398, 428, 482, 572, 629, 930, 2332
HphI	GGTGA	3 cut(s)	471, 1181, 2012
Hpy166II	GTNNAC	6 cut(s)	544, 1183, 1352, 1582, 2164, 2321
Hpy188I	TCNGA	8 cut(s)	133, 301, 1006, 1250, 1475, 1494, 1830, 2086
Hpy8I	GTNNAC	6 cut(s)	544, 1183, 1352, 1582, 2164, 2321
Hpy99I	CGWCG	2 cut(s)	610, 2231
HpyAV	CCTTC	9 cut(s)	26, 412, 860, 874, 1314, 1400, 1404, 1476, 1537
HpyCH4III	ACNGT	4 cut(s)	202, 469, 730, 1960
HpyCH4IV	ACGT	3 cut(s)	1360, 1975, 2063
HpyF3I	CTNAG	7 cut(s)	563, 669, 737, 969, 1509, 1683, 2085
HpySE526I	ACGT	3 cut(s)	1360, 1975, 2063
HspAI	GCGC	7 cut(s)	240, 267, 463, 692, 1553, 1555, 2181
Ksp22I	TGATCA	2 cut(s)	1335, 1422
LmnI	GCTCC	7 cut(s)	871, 886, 1285, 1324, 1386, 1861, 2197
Lsp1109I	GCAGC	8 cut(s)	447, 1639, 1699, 1798, 1805, 1991, 2041, 2323
LweI	GCATC	5 cut(s)	954, 1300, 1354, 1656, 2209
MaeI	CTAG	8 cut(s)	291, 1457, 1631, 1739, 1860, 1967, 2046, 2316
MaeII	ACGT	3 cut(s)	1360, 1975, 2063
MaeIII	GTNAC	5 cut(s)	190, 477, 1846, 2286, 2396
MfeI	CAATTG	1 cut(s)	1851
MflI	RGATCY	2 cut(s)	1459, 1900
MhlI	GDGCHC	6 cut(s)	26, 164, 324, 937, 952, 1255
MlsI	TGGCCA	1 cut(s)	686
MluNI	TGGCCA	1 cut(s)	686
MlyI	GAGTC	3 cut(s)	524, 619, 2121
MmeI	TCCRAC	2 cut(s)	1287, 1297
Mox20I	TGGCCA	1 cut(s)	686
MscI	TGGCCA	1 cut(s)	686
MseI	TTAA	4 cut(s)	1095, 1374, 2012, 2241
MslI	CAYNNNNRTG	1 cut(s)	2366
Msp20I	TGGCCA	1 cut(s)	686
MspA1I	CMGCKG	2 cut(s)	562, 2054
MspI	CCGG	7 cut(s)	398, 428, 482, 572, 629, 930, 2332
MunI	CAATTG	1 cut(s)	1851
Mva1269I	GAATGC	1 cut(s)	1740
MvnI	CGCG	5 cut(s)	240, 267, 692, 1555, 2181
NciI	CCSGG	2 cut(s)	931, 2333
NheI	GCTAGC	1 cut(s)	1630
NlaIV	GGNNCC	4 cut(s)	335, 579, 1902, 2296
NmeAIII	GCCGAG	3 cut(s)	448, 817, 823
NmuCI	GTSAC	2 cut(s)	477, 1846
NsbI	TGCGCA	1 cut(s)	464
NspI	RCATGY	2 cut(s)	386, 2170
NspV	TTCGAA	1 cut(s)	677
PagI	TCATGA	1 cut(s)	921
PaqCI	CACCTGC	1 cut(s)	1166
PauI	GCGCGC	1 cut(s)	1553
PciI	ACATGT	1 cut(s)	2166
PcsI	WCGNNNNNNNCGW	2 cut(s)	144, 943
PctI	GAATGC	1 cut(s)	1740
PfeI	GAWTC	6 cut(s)	93, 368, 449, 674, 892, 2191
PflMI	CCANNNNNTGG	1 cut(s)	1384
PfoI	TCCNGGA	2 cut(s)	1129, 2355
Ple19I	CGATCG	1 cut(s)	405
PleI	GAGTC	3 cut(s)	524, 618, 2121
PmaCI	CACGTG	1 cut(s)	1976
PmlI	CACGTG	1 cut(s)	1976
PpsI	GAGTC	3 cut(s)	524, 618, 2121
Ppu21I	YACGTR	1 cut(s)	1976
PscI	ACATGT	1 cut(s)	2166
Psp124BI	GAGCTC	2 cut(s)	324, 952
PspCI	CACGTG	1 cut(s)	1976
PspFI	CCCAGC	2 cut(s)	56, 694
PspN4I	GGNNCC	4 cut(s)	335, 579, 1902, 2296
PspPI	GGNCC	6 cut(s)	333, 430, 657, 927, 1124, 1546
PsrI	GAACNNNNNNTAC	2 cut(s)	1672, 1704
PstNI	CAGNNNCTG	1 cut(s)	1384
PsuI	RGATCY	2 cut(s)	1459, 1900
PteI	GCGCGC	1 cut(s)	1553
PvuI	CGATCG	1 cut(s)	405
PvuII	CAGCTG	1 cut(s)	2054
RsaI	GTAC	1 cut(s)	2017
RsaNI	GTAC	1 cut(s)	2016
RseI	CAYNNNNRTG	1 cut(s)	2366
SacI	GAGCTC	2 cut(s)	324, 952
SaqAI	TTAA	4 cut(s)	1095, 1374, 2012, 2241
Sau96I	GGNCC	6 cut(s)	333, 430, 657, 927, 1124, 1546
SchI	GAGTC	3 cut(s)	524, 619, 2121
SduI	GDGCHC	6 cut(s)	26, 164, 324, 937, 952, 1255
SfaNI	GCATC	5 cut(s)	954, 1300, 1354, 1656, 2209
SfuI	TTCGAA	1 cut(s)	677
SinI	GGWCC	4 cut(s)	333, 430, 927, 1546
SmiMI	CAYNNNNRTG	1 cut(s)	2366
SmlI	CTYRAG	6 cut(s)	179, 315, 377, 614, 1034, 1040
SmoI	CTYRAG	6 cut(s)	179, 315, 377, 614, 1034, 1040
SspMI	CTAG	8 cut(s)	291, 1457, 1631, 1739, 1860, 1967, 2046, 2316
SstI	GAGCTC	2 cut(s)	324, 952
StyI	CCWWGG	1 cut(s)	337
TaaI	ACNGT	4 cut(s)	202, 469, 730, 1960
TaiI	ACGT	3 cut(s)	1363, 1978, 2066
TaqI	TCGA	9 cut(s)	171, 354, 371, 405, 677, 1933, 2125, 2139, 2229
TatI	WGTACW	1 cut(s)	2015
TauI	GCSGC	6 cut(s)	245, 415, 559, 562, 571, 852
TfiI	GAWTC	6 cut(s)	93, 368, 449, 674, 892, 2191
Tru1I	TTAA	4 cut(s)	1095, 1374, 2012, 2241
Tru9I	TTAA	4 cut(s)	1095, 1374, 2012, 2241
TseFI	GTSAC	2 cut(s)	477, 1846
TseI	GCWGC	8 cut(s)	460, 1652, 1712, 1793, 1811, 1979, 2054, 2336
Tsp45I	GTSAC	2 cut(s)	477, 1846
TspGWI	ACGGA	2 cut(s)	178, 2074
Van91I	CCANNNNNTGG	1 cut(s)	1384
VpaK11BI	GGWCC	4 cut(s)	333, 430, 927, 1546
XagI	CCTNNNNNAGG	1 cut(s)	585
XapI	RAATTY	3 cut(s)	523, 1098, 1536
XbaI	TCTAGA	2 cut(s)	290, 1456
XceI	RCATGY	2 cut(s)	386, 2170
XspI	CTAG	8 cut(s)	291, 1457, 1631, 1739, 1860, 1967, 2046, 2316

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.