Rorug02G0360700

ATP-dependent zinc metalloprotease

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Reverse (-)
45663332 .. 45666000
2669 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0360700.1

Sequence Viewer

Length: 1209 bp
ATGGTGCCAAAGGTAGCTGCAGAGGATCCACCAGTAGCTACAGTTGATGAGGTGATGGTGGTGAGAGAGTACAATGAAGAAAGTGATAAGGTGGCGGTGGAGGAGATGGAGAGGCGGTGTGAGATGGCTGGGCAGAGGGGAAGGCCTTCTCTTGTCACTGATCTCTTGGGTGACCCAAAATGTCGCATTCGGCATTTCCCAACACACATAATGCTGGTTGCACTATACGGAGAACAAAAGGAAATTGTGGGTGTCATAAGGGGTTGTGTAAAAAAGGTAACAAGAGGAAATTCAGTGTTTGTGAAGCTGGCTTATATCCTGGGACTAAGGGTCTCTCCCATGCACAGGAGGCTTGGCATTGGTACAAAACTAGTGAAACATTTAGAAGAATGGTGCAAGCAAAAGGGAGCAGAATATGCATACATGGCCACAGACTGCACCAACGAGGCCTCAATCAATTTGTTCACACTGAAATGCTCATACCAAAAATTTCGCACACCCACCATTTTAGTCCAGCCAGTTCACGCCCACTATAAACCTATACCTTCCAGCATTGCAATTGTTCGACTACCCGTCTACCTAGCCGAGTCGATCTACCGTCAAATTTATGCCCATTCTGAATTCTTCCCAGAAGATATGGATGTCATTTTATCTAGTGCCTTAAATTTGGGCACTTTCATGGCGCTGCCCAAAAAATACCTTCCGAAATGGGACCCACAGAAAAGCACTTTTCCCCCTAGTGCTTTTGCCATCCTCAGCGTTTGGAACACCAAAGAAGTGTTCAAGCTACAAGTGAAAGGAATGTCGAAGTTGACACGCGCATGTTGCGTGGGAAGTAGGCTAGTGGATGCATGGCTTCCATGGCTGAGACTGCCTTCATTTCCAAACGTTTTTAAGCAGTTCGGGGTGTATTTTATGTACGGCTTACATGCGGAGGGCAAGCACGGGTTGCGGCTGATGAAGGGTTTGTGCAACTTTGTGCACAATGTGGGTAGGGATGACCATGGATGTGCTGCCGTGGTGGCGGAGGTGAGCCAGAGAGACCCAGTTAGAGAGGCAATCCCACATTGGAGAAAATTTTCATGGGCTGAGGACATGTGGTGTGTCAAGAAGCTCACAGAAGCCAAGCAAGGACTGCCGTCGCCATCGGATTGGATTAACTCTCGACCGTCTTCACCGATGATTTTTGTTGACCCTCGTGACTTTTAA

Protein Analysis

402

Amino Acids

45.72

Weight (kDa)

9.17

Isoelectric Point (pI)

44.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Acetyltransf_1 PF00583 65 - 156 4.1e-16 Acetyltransferase (GNAT) family
Acetyltransf_7 PF13508 70 - 152 2.5e-07 Acetyltransferase (GNAT) domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 4
AccI GTMKAC 1 cut(s) 576
AccII CGCG 1 cut(s) 819
AciI CCGC 5 cut(s) 95, 115, 932, 952, 1025
AclI AACGTT 1 cut(s) 888
AclWI GGATC 2 cut(s) 20, 33
AcoI YGGCCR 1 cut(s) 426
AcsI RAATTY 6 cut(s) 289, 488, 603, 620, 664, 1076
AdeI CACNNNGTG 1 cut(s) 988
AfaI GTAC 3 cut(s) 71, 364, 920
AfiI CCNNNNNNNGG 1 cut(s) 345
AflIII ACRYGT 1 cut(s) 1095
AgsI TTSAA 1 cut(s) 784
AhdI GACNNNNNGTC 2 cut(s) 329, 572
AhlI ACTAGT 1 cut(s) 370
AjnI CCWGG 1 cut(s) 318
AjuI GAANNNNNNNTTGG 2 cut(s) 764, 796
AluBI AGCT 5 cut(s) 17, 38, 307, 787, 1114
AluI AGCT 5 cut(s) 17, 38, 307, 787, 1114
Alw21I GWGCWC 1 cut(s) 984
Alw26I GTCTC 3 cut(s) 337, 862, 1035
Alw44I GTGCAC 1 cut(s) 980
AlwI GGATC 2 cut(s) 20, 33
AoxI GGCC 3 cut(s) 143, 426, 447
ApaLI GTGCAC 1 cut(s) 980
ApeKI GCWGC 3 cut(s) 17, 685, 1013
ApoI RAATTY 6 cut(s) 289, 488, 603, 620, 664, 1076
Asp700I GAANNNNTTC 2 cut(s) 145, 1078
AspLEI GCGC 2 cut(s) 685, 821
AspS9I GGNCC 1 cut(s) 712
AsuHPI GGTGA 5 cut(s) 64, 73, 182, 1042, 1167
AvaII GGWCC 1 cut(s) 712
BaeGI GKGCMC 2 cut(s) 674, 984
BalI TGGCCA 1 cut(s) 428
BamHI GGATCC 1 cut(s) 25
BanI GGYRCC 1 cut(s) 4
BauI CACGAG 1 cut(s) 1197
BbsI GAAGAC 1 cut(s) 1164
Bbv12I GWGCWC 1 cut(s) 984
BbvCI CCTCAGC 2 cut(s) 755, 1089
BbvI GCAGC 3 cut(s) 4, 672, 1000
BccI CCATC 5 cut(s) 49, 100, 118, 758, 1153
BceAI ACGGC 3 cut(s) 937, 1001, 1123
BciT130I CCWGG 1 cut(s) 320
BcoDI GTCTC 3 cut(s) 337, 862, 1035
BcuI ACTAGT 1 cut(s) 370
BfaI CTAG 5 cut(s) 371, 581, 654, 738, 842
BfmI CTRYAG 2 cut(s) 18, 39
BfoI RGCGCY 1 cut(s) 686
BglI GCCNNNNNGGC 1 cut(s) 1022
BisI GCNGC 4 cut(s) 18, 686, 953, 1014
BlsI GCNGC 4 cut(s) 19, 687, 954, 1015
Bme1390I CCNGG 1 cut(s) 320
Bme18I GGWCC 1 cut(s) 712
BmeRI GACNNNNNGTC 2 cut(s) 329, 572
BmgT120I GGNCC 1 cut(s) 712
BmiI GGNNCC 4 cut(s) 6, 27, 713, 714
BmrFI CCNGG 1 cut(s) 320
BmrI ACTGGG 1 cut(s) 1040
BmsI GCATC 1 cut(s) 838
BmuI ACTGGG 1 cut(s) 1040
BoxI GACNNNNGTC 1 cut(s) 1138
BpiI GAAGAC 1 cut(s) 1164
Bpu10I CCTNAGC 2 cut(s) 755, 1089
BsaI GGTCTC 2 cut(s) 337, 1035
BsaJI CCNNGG 4 cut(s) 319, 860, 1003, 1017
BsaXI ACNNNNNCTCC 2 cut(s) 101, 131
Bsc4I CCNNNNNNNGG 1 cut(s) 345
Bse1I ACTGG 3 cut(s) 32, 518, 1046
Bse3DI GCAATG 1 cut(s) 552
BseBI CCWGG 1 cut(s) 320
BseDI CCNNGG 4 cut(s) 319, 860, 1003, 1017
BseGI GGATG 5 cut(s) 646, 750, 853, 1003, 1013
BseLI CCNNNNNNNGG 1 cut(s) 345
BseMI GCAATG 1 cut(s) 552
BseMII CTCAG 3 cut(s) 769, 857, 1080
BseNI ACTGG 3 cut(s) 32, 518, 1046
BseRI GAGGAG 1 cut(s) 116
BseSI GKGCMC 2 cut(s) 674, 984
BseXI GCAGC 3 cut(s) 4, 672, 1000
BseYI CCCAGC 1 cut(s) 128
BsgI GTGCAG 1 cut(s) 421
Bsh1236I CGCG 1 cut(s) 819
Bsh1285I CGRYCG 1 cut(s) 1169
BshFI GGCC 3 cut(s) 145, 428, 449
BshNI GGYRCC 1 cut(s) 4
BsiEI CGRYCG 1 cut(s) 1169
BsiHKAI GWGCWC 1 cut(s) 984
BslFI GGGAC 2 cut(s) 336, 725
BslI CCNNNNNNNGG 1 cut(s) 345
BsmAI GTCTC 3 cut(s) 337, 862, 1035
BsmFI GGGAC 2 cut(s) 336, 725
BsmI GAATGC 1 cut(s) 186
BsnI GGCC 3 cut(s) 145, 428, 449
Bso31I GGTCTC 2 cut(s) 337, 1035
Bsp1286I GDGCHC 2 cut(s) 674, 984
Bsp143I GATC 3 cut(s) 25, 160, 591
Bsp19I CCATGG 2 cut(s) 860, 1003
BspACI CCGC 5 cut(s) 95, 115, 932, 952, 1025
BspANI GGCC 3 cut(s) 145, 428, 449
BspCNI CTCAG 3 cut(s) 768, 858, 1081
BspFNI CGCG 1 cut(s) 819
BspLI GGNNCC 4 cut(s) 6, 27, 713, 714
BspMAI CTGCAG 1 cut(s) 22
BspPI GGATC 2 cut(s) 20, 33
BspT107I GGYRCC 1 cut(s) 4
BspTNI GGTCTC 2 cut(s) 337, 1035
BsrDI GCAATG 1 cut(s) 552
BsrI ACTGG 3 cut(s) 32, 518, 1046
BssECI CCNNGG 4 cut(s) 319, 860, 1003, 1017
BssMI GATC 3 cut(s) 25, 160, 591
BssSI CACGAG 1 cut(s) 1197
BssT1I CCWWGG 2 cut(s) 860, 1003
Bst2BI CACGAG 1 cut(s) 1197
Bst2UI CCWGG 1 cut(s) 320
Bst4CI ACNGT 3 cut(s) 43, 599, 1170
BstAPI GCANNNNNTGC 3 cut(s) 416, 949, 1135
BstC8I GCNNGC 3 cut(s) 309, 398, 941
BstDEI CTNAG 4 cut(s) 326, 755, 866, 1089
BstDSI CCRYGG 3 cut(s) 860, 1003, 1017
BstEII GGTNACC 1 cut(s) 170
BstF5I GGATG 5 cut(s) 646, 750, 853, 1003, 1013
BstFNI CGCG 1 cut(s) 819
BstH2I RGCGCY 1 cut(s) 686
BstHHI GCGC 2 cut(s) 685, 821
BstKTI GATC 3 cut(s) 28, 163, 594
BstMAI GTCTC 3 cut(s) 337, 862, 1035
BstMBI GATC 3 cut(s) 25, 160, 591
BstMCI CGRYCG 1 cut(s) 1169
BstMWI GCNNNNNNNGC 9 cut(s) 349, 416, 425, 825, 862, 871, 949, 1022, 1135
BstNI CCWGG 1 cut(s) 320
BstNSI RCATGY 3 cut(s) 825, 932, 1099
BstPAI GACNNNNGTC 1 cut(s) 1138
BstPI GGTNACC 1 cut(s) 170
BstSCI CCNGG 1 cut(s) 318
BstSFI CTRYAG 2 cut(s) 18, 39
BstSLI GKGCMC 2 cut(s) 674, 984
BstUI CGCG 1 cut(s) 819
BstV1I GCAGC 3 cut(s) 4, 672, 1000
BstV2I GAAGAC 1 cut(s) 1164
BstX2I RGATCY 1 cut(s) 25
BstXI CCANNNNNNTGG 1 cut(s) 1152
BstYI RGATCY 1 cut(s) 25
BsuRI GGCC 3 cut(s) 145, 428, 449
BtgI CCRYGG 3 cut(s) 860, 1003, 1017
BtsCI GGATG 5 cut(s) 646, 750, 853, 1003, 1013
BtsIMutI CAGTG 3 cut(s) 156, 300, 467
Cac8I GCNNGC 3 cut(s) 309, 398, 941
CfoI GCGC 2 cut(s) 685, 821
Cfr13I GGNCC 1 cut(s) 712
Csp6I GTAC 3 cut(s) 70, 363, 919
CviQI GTAC 3 cut(s) 70, 363, 919
DdeI CTNAG 4 cut(s) 326, 755, 866, 1089
DpnI GATC 3 cut(s) 27, 162, 593
DpnII GATC 3 cut(s) 25, 160, 591
DraIII CACNNNGTG 1 cut(s) 988
DriI GACNNNNNGTC 2 cut(s) 329, 572
EaeI YGGCCR 1 cut(s) 426
Eam1105I GACNNNNNGTC 2 cut(s) 329, 572
EciI GGCGGA 1 cut(s) 1040
Eco130I CCWWGG 2 cut(s) 860, 1003
Eco147I AGGCCT 2 cut(s) 145, 449
Eco31I GGTCTC 2 cut(s) 337, 1035
Eco47I GGWCC 1 cut(s) 712
Eco91I GGTNACC 1 cut(s) 170
EcoO109I RGGNCCY 1 cut(s) 712
EcoO65I GGTNACC 1 cut(s) 170
EcoRI GAATTC 1 cut(s) 620
EcoRII CCWGG 1 cut(s) 318
EcoT14I CCWWGG 2 cut(s) 860, 1003
EcoT22I ATGCAT 2 cut(s) 421, 853
ErhI CCWWGG 2 cut(s) 860, 1003
FaqI GGGAC 2 cut(s) 336, 725
FblI GTMKAC 1 cut(s) 576
Fnu4HI GCNGC 4 cut(s) 18, 686, 953, 1014
FokI GGATG 5 cut(s) 653, 737, 860, 1010, 1020
Fsp4HI GCNGC 4 cut(s) 18, 686, 953, 1014
FspBI CTAG 5 cut(s) 371, 581, 654, 738, 842
GlaI GCGC 2 cut(s) 684, 820
GluI GCNGC 4 cut(s) 18, 686, 953, 1014
GsaI CCCAGC 1 cut(s) 132
HaeII RGCGCY 1 cut(s) 686
HaeIII GGCC 3 cut(s) 145, 428, 449
HhaI GCGC 2 cut(s) 685, 821
Hin6I GCGC 2 cut(s) 683, 819
HinP1I GCGC 2 cut(s) 683, 819
HincII GTYRAC 2 cut(s) 813, 1192
HindII GTYRAC 2 cut(s) 813, 1192
HinfI GANTC 1 cut(s) 587
HphI GGTGA 5 cut(s) 64, 73, 182, 1042, 1167
Hpy166II GTNNAC 6 cut(s) 465, 523, 577, 813, 982, 1192
Hpy188I TCNGA 3 cut(s) 619, 705, 1150
Hpy188III TCNNGA 3 cut(s) 1108, 1164, 1199
Hpy8I GTNNAC 6 cut(s) 465, 523, 577, 813, 982, 1192
Hpy99I CGWCG 1 cut(s) 1144
HpyAV CCTTC 6 cut(s) 135, 156, 555, 710, 885, 955
HpyCH4III ACNGT 3 cut(s) 43, 599, 1170
HpyCH4IV ACGT 1 cut(s) 888
HpyF10VI GCNNNNNNNGC 9 cut(s) 349, 416, 425, 825, 862, 871, 949, 1022, 1135
HpyF3I CTNAG 4 cut(s) 326, 755, 866, 1089
HpySE526I ACGT 1 cut(s) 888
HspAI GCGC 2 cut(s) 683, 819
KflI GGGWCCC 1 cut(s) 712
Kzo9I GATC 3 cut(s) 25, 160, 591
LmnI GCTCC 1 cut(s) 407
Lsp1109I GCAGC 3 cut(s) 4, 672, 1000
LweI GCATC 1 cut(s) 838
MaeI CTAG 5 cut(s) 371, 581, 654, 738, 842
MaeII ACGT 1 cut(s) 888
MaeIII GTNAC 4 cut(s) 154, 170, 277, 1199
MalI GATC 3 cut(s) 27, 162, 593
MboI GATC 3 cut(s) 25, 160, 591
MboII GAAGA 5 cut(s) 89, 398, 616, 644, 1164
MfeI CAATTG 1 cut(s) 558
MflI RGATCY 1 cut(s) 25
MhlI GDGCHC 2 cut(s) 674, 984
MlsI TGGCCA 1 cut(s) 428
MluCI AATT 9 cut(s) 243, 289, 457, 488, 558, 603, 620, 664, 1076
MluNI TGGCCA 1 cut(s) 428
MlyI GAGTC 1 cut(s) 596
Mox20I TGGCCA 1 cut(s) 428
Mph1103I ATGCAT 2 cut(s) 421, 853
MroXI GAANNNNTTC 2 cut(s) 145, 1078
MscI TGGCCA 1 cut(s) 428
MseI TTAA 4 cut(s) 662, 894, 1158, 1207
MslI CAYNNNNRTG 4 cut(s) 472, 677, 820, 1008
Msp20I TGGCCA 1 cut(s) 428
MspR9I CCNGG 1 cut(s) 320
MunI CAATTG 1 cut(s) 558
Mva1269I GAATGC 1 cut(s) 186
MvaI CCWGG 1 cut(s) 320
MvnI CGCG 1 cut(s) 819
MwoI GCNNNNNNNGC 9 cut(s) 349, 416, 425, 825, 862, 871, 949, 1022, 1135
NcoI CCATGG 2 cut(s) 860, 1003
NdeII GATC 3 cut(s) 25, 160, 591
NlaIV GGNNCC 4 cut(s) 6, 27, 713, 714
NmeAIII GCCGAG 1 cut(s) 610
NmuCI GTSAC 3 cut(s) 154, 170, 1199
NsiI ATGCAT 2 cut(s) 421, 853
NspI RCATGY 3 cut(s) 825, 932, 1099
PceI AGGCCT 2 cut(s) 145, 449
PciI ACATGT 1 cut(s) 1095
PctI GAATGC 1 cut(s) 186
PdmI GAANNNNTTC 2 cut(s) 145, 1078
PkrI GCNGC 4 cut(s) 19, 687, 954, 1015
PleI GAGTC 1 cut(s) 595
PpsI GAGTC 1 cut(s) 595
PpuMI RGGWCCY 1 cut(s) 712
PscI ACATGT 1 cut(s) 1095
PshAI GACNNNNGTC 1 cut(s) 1138
Psp1406I AACGTT 1 cut(s) 888
Psp5II RGGWCCY 1 cut(s) 712
Psp6I CCWGG 1 cut(s) 318
PspEI GGTNACC 1 cut(s) 170
PspFI CCCAGC 1 cut(s) 128
PspGI CCWGG 1 cut(s) 318
PspN4I GGNNCC 4 cut(s) 6, 27, 713, 714
PspPI GGNCC 1 cut(s) 712
PspPPI RGGWCCY 1 cut(s) 712
PstI CTGCAG 1 cut(s) 22
PsuI RGATCY 1 cut(s) 25
RsaI GTAC 3 cut(s) 71, 364, 920
RsaNI GTAC 3 cut(s) 70, 363, 919
RseI CAYNNNNRTG 4 cut(s) 472, 677, 820, 1008
SaqAI TTAA 4 cut(s) 662, 894, 1158, 1207
SatI GCNGC 4 cut(s) 18, 686, 953, 1014
Sau3AI GATC 3 cut(s) 25, 160, 591
Sau96I GGNCC 1 cut(s) 712
SchI GAGTC 1 cut(s) 596
ScrFI CCNGG 1 cut(s) 320
SduI GDGCHC 2 cut(s) 674, 984
SfaNI GCATC 1 cut(s) 838
SfcI CTRYAG 2 cut(s) 18, 39
SinI GGWCC 1 cut(s) 712
SmiMI CAYNNNNRTG 4 cut(s) 472, 677, 820, 1008
SpeI ACTAGT 1 cut(s) 370
Sse9I AATT 9 cut(s) 243, 289, 457, 488, 558, 603, 620, 664, 1076
SseBI AGGCCT 2 cut(s) 145, 449
SsiI CCGC 5 cut(s) 95, 115, 932, 952, 1025
SspMI CTAG 5 cut(s) 371, 581, 654, 738, 842
StuI AGGCCT 2 cut(s) 145, 449
StyD4I CCNGG 1 cut(s) 318
StyI CCWWGG 2 cut(s) 860, 1003
TaaI ACNGT 3 cut(s) 43, 599, 1170
TaiI ACGT 1 cut(s) 891
TaqI TCGA 4 cut(s) 565, 590, 806, 1165
TasI AATT 9 cut(s) 243, 289, 457, 488, 558, 603, 620, 664, 1076
TatI WGTACW 1 cut(s) 69
TauI GCSGC 1 cut(s) 955
Tru1I TTAA 4 cut(s) 662, 894, 1158, 1207
Tru9I TTAA 4 cut(s) 662, 894, 1158, 1207
TscAI CASTG 3 cut(s) 163, 300, 474
TseFI GTSAC 3 cut(s) 154, 170, 1199
TseI GCWGC 3 cut(s) 17, 685, 1013
Tsp45I GTSAC 3 cut(s) 154, 170, 1199
TspDTI ATGAA 5 cut(s) 90, 667, 867, 974, 1071
TspGWI ACGGA 1 cut(s) 243
TspRI CASTG 3 cut(s) 163, 300, 474
VneI GTGCAC 1 cut(s) 980
VpaK11BI GGWCC 1 cut(s) 712
XapI RAATTY 6 cut(s) 289, 488, 603, 620, 664, 1076
XceI RCATGY 3 cut(s) 825, 932, 1099
XmiI GTMKAC 1 cut(s) 576
XmnI GAANNNNTTC 2 cut(s) 145, 1078
XspI CTAG 5 cut(s) 371, 581, 654, 738, 842
Zsp2I ATGCAT 2 cut(s) 421, 853
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.