Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr9

Orthogroup ID

OG0010069

Physical Location & Seq

Genomic Coordinates Forward (+)

10732172 .. 10736887

Gene Structure 4716 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom09g12280.6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2316 bp

ATGGACTGCCATTGCCTTCTGGGCTCATCTTCTTCCCTATCCCCATACCCCAAACCAATACCCCTCACCAAAAACCCGCCAAAACCCCTCCCTCCCTCCACCGTCTCCTCCTTCTCCTCCTCCCACCTCGCACCCGCCGACGATGATGATGAAAACGATAAAACCCACAGACCTAATTTCGATTTCCTCAAGCTCTCTGTAACTCTCACCGTAATCTCCACCTCCCTCCCCCAAATCCCCACCGCCGTCGCCGCCGTCAAGGAGAAAAAGCGCGCGCCCAAGAAGTCTACCCCCAAAAAGTCCGAAGCTTTATCTCCCCAAGAACTCGAGTCATGGTCCCAGGGACTCCCCATCGTCTCCAATCGAATTCCGTACACCCAGCTGTTGGCGCTCAGTCAGGAAGGTAAGCTGAAGCATGTAATCAAGCCACCGGGAATTGAATTGCAGAAAAGGGCAGAGCCTGTTCTGGTTGTTCTCGAAGATTCTCGGGTTCTACGCACCGTTTTGCCATCGGTGGATAGCGACAGGAGGTTCTGGGAGCAATGGGAGGAGTTGAAAATTGAGTCTTTCTGTGTTAATGCTTACACTCCGCCGCTTAAACGGCCGGAGGTGCCGTCGCCGTACTTGGGCTTTGTGGCGAAATGGCCCGGGTTTCTGTCGTCCTTCTCCGGGAAGCCGAAGAAGGAGAGCAAGAGAGCTATGGAGTTGAGAAGGGCAAGGGAGGAGTTCAAGATGCAGAGGAAGGAGGAATTGGATAGGATGAGGAAGGAGAGAGAGATGATTGACAAGGCAATGAAGGCTCAGAAGAAAGAGGAGGAGAGGAGAGTGAGGAGAGAAATGAGGAAGAAGAAGCACGATGATTCATTGCGCGAGGCACGGAGGAATTATCAGGAGATGGCCAATGTATGGGCCAATTTGGCTCAGGACACCAATGTGGCTACTGCTCTTGGGTTGGTGTTCTTCTACATATTTTATAGGACTGTGGTGCTTAGTTATAGGAGGCAGAAGAAGGACTACGAGGATAGGCTGAAGATCGAAAAGGCGGAGGCAGAGGAGAGGAAGAAAATGAGGGAGTTGGAGAGGGAGATGGAGGGGATTGAGGGTGATGAGGAGGATGAGATTGAGCCAGGGAAGGGTGAGCAGAATCCTTATCTGAAAATGGCAATGCAGTTCATGAAGTCTGGTGCTCGTGTTCGACGAGCTCATAATAAGAGGCTGCCTCAGTATTTGGAGAGAGGCGTGGATGTCAAGTTTACGGATGTGGCAGGGCTTGGGAAGATTAGGCTTGAGCTTGAGGAGATTGTCAAGTTCTTCACTCATGGTGAAATGTATAGGAGAAGAGGAGTTAAAATACCAGGTGGGATACTGCTTTGTGGCCCTCCTGGAGTGGGTAAGACATTGCTTGCAAAAGCTGTTGCTGGTGAAGCAGGCGTGAACTTCTTTTCCATTTCGGCCTCTCAGTTCGTGGAGATATACGTTGGTGTTGGTGCTTCTCGTGTCCGAGCACTTTATCAGGAGGCAAGGGAAAATGCCCCATCAGTTGTCTTCATTGATGAGTTGGATGCCGTTGGAAGAGAGCGTGGTTTGATCAAGGGTTCTGGTGGACAGGAACGTGATGCTACTCTTAATCAGCTCCTTGTTTGCTTGGATGGGTTTGAAGGAAGAGGGGAAGTGATCACTATTGCTTCCACAAATAGACCAGATATTCTAGATCCAGCCCTTGTCAGACCTGGACGGTTTGACCGGAAGATATTTATCCCTAAGCCTGGTCTTATAGGTCGCATTGAAATTTTGAAGGTCCATGCACGCAAGAAGCCTATGGCTGAAGACGTCGACTATATGGCTATTGCTAGTATGACTGATGGAATGGTTGGTGCAGAGCTAGCTAACATAATTGAGGTTGCTGCAATCAACATGATGCGTGATGGAAGGACTGAGATTACTACTGACGACCTTTTACAAGCTGCACAAATGGAAGAAAGAGGAATGCTAGATAGGAAGGAGAGAAGTTTAGATACATGGAAGCAAGTAGCTATTAATGAGGCTGCAATGGCTGTTGTTGCTGTGAACTTTCCTGATCTTAGAAATATTGAGTTTGTCACAATTGCTCCTAGAGCTGGTCGAGAATTGGGTTATGTTAGAATGAAAATGGATCCTATCAAGTTCAGAGAAGGAATGCTTACTCGGCAATCGCTCCTCGATCATATCACTGTTCAACTGGCACCACGTGCAGCTGATGAACTTTGGTTTGGTGAGGATCAGAAAGAAATGGAGGCCAACTTCCAAATTTGGTCCAAGTTGAAGCTAGAAGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004176 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019538 GO:0031967 GO:0031975 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0070011 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA Peptidase_M41

Protein Analysis

772

Amino Acids

87.59

Weight (kDa)

9.07

Isoelectric Point (pI)

46.81

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010069)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G16290
fragaria_vesca	FvH4_6g32150 FvH4_6g32150 FvH4_6g32150
malus_domestica	MD09G1206000.v1.1
prunus_persica	Prupe.3G061400_v2.0.a1 Prupe.3G065400_v2.0.a1
pyrus_communis	pycom09g12280
rosa_chinensis	RchiOBHm_Chr2g0140041
rosa_laevigata	RLG00000019844
rosa_multiflora	Rmu_co8464017.1_g000001 Rmu_co8471751.1_g000001 Rmu_sc0010982.1_g000001
rosa_roxburghii	Rroxscaffold_2G00105120
rosa_rugosa	Rorug02G0360600 Rorug02G0360700
rosa_samantha	Rh2AG411300 Rh2BG421500 Rh2CG397400 Rh2DG431000
rosa_wichuraiana	Rw2G033690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1833
AccB1I	GGYRCC	2 cut(s)	610, 2221
AccB7I	CCANNNNNTGG	2 cut(s)	385, 906
AccI	GTMKAC	2 cut(s)	287, 1833
AccII	CGCG	3 cut(s)	273, 275, 870
AciI	CCGC	7 cut(s)	77, 135, 243, 252, 590, 593, 1043
AclWI	GGATC	4 cut(s)	1706, 2147, 2160, 2265
AcoI	YGGCCR	2 cut(s)	602, 897
AcsI	RAATTY	3 cut(s)	366, 1788, 2286
AcuI	CTGAAG	3 cut(s)	431, 1049, 1845
AcvI	CACGTG	1 cut(s)	2228
AcyI	GRCGYC	1 cut(s)	1830
AdeI	CACNNNGTG	1 cut(s)	2228
AfaI	GTAC	2 cut(s)	374, 623
AfiI	CCNNNNNNNGG	8 cut(s)	385, 626, 669, 906, 1133, 1388, 1766, 2117
AgsI	TTSAA	8 cut(s)	440, 556, 730, 1658, 1787, 1795, 2216, 2302
AjnI	CCWGG	6 cut(s)	339, 1126, 1354, 1381, 1729, 1765
AjuI	GAANNNNNNNTTGG	4 cut(s)	734, 766, 2232, 2264
AleI	CACNNNNGTG	1 cut(s)	932
AloI	GAACNNNNNNTCC	2 cut(s)	1427, 1459
Alw21I	GWGCWC	3 cut(s)	1189, 1204, 1507
Alw26I	GTCTC	2 cut(s)	109, 361
AlwI	GGATC	4 cut(s)	1706, 2147, 2160, 2265
AlwNI	CAGNNNCTG	1 cut(s)	461
Ama87I	CYCGRG	3 cut(s)	326, 486, 647
AoxI	GGCC	7 cut(s)	602, 644, 897, 909, 1375, 1452, 2274
ApeKI	GCWGC	5 cut(s)	1216, 1904, 1964, 2045, 2231
ApoI	RAATTY	3 cut(s)	366, 1788, 2286
AseI	ATTAAT	1 cut(s)	2037
AspLEI	GCGC	5 cut(s)	273, 275, 277, 391, 870
AspS9I	GGNCC	6 cut(s)	336, 645, 909, 1376, 1798, 2292
AsuC2I	CCSGG	4 cut(s)	432, 648, 649, 670
AsuHPI	GGTGA	7 cut(s)	58, 199, 1115, 1148, 1334, 1433, 2264
AsuNHI	GCTAGC	1 cut(s)	1882
AvaI	CYCGRG	3 cut(s)	326, 486, 647
AvaII	GGWCC	3 cut(s)	336, 1798, 2292
BalI	TGGCCA	1 cut(s)	899
BamHI	GGATCC	1 cut(s)	2152
BanI	GGYRCC	2 cut(s)	610, 2221
BanII	GRGCYC	2 cut(s)	26, 1204
BarI	GAAGNNNNNNTAC	4 cut(s)	998, 1030, 1999, 2031
BauI	CACGAG	2 cut(s)	1188, 1494
BbrPI	CACGTG	1 cut(s)	2228
BbsI	GAAGAC	2 cut(s)	1537, 1833
Bbv12I	GWGCWC	3 cut(s)	1189, 1204, 1507
BbvI	GCAGC	5 cut(s)	1203, 1891, 1951, 2032, 2243
BccI	CCATC	8 cut(s)	359, 517, 889, 1081, 1543, 1643, 1856, 1919
BceAI	ACGGC	6 cut(s)	230, 239, 598, 604, 617, 1550
BciT130I	CCWGG	6 cut(s)	341, 1128, 1356, 1383, 1731, 1767
BciVI	GTATCC	1 cut(s)	1356
BclI	TGATCA	2 cut(s)	1587, 1674
BcnI	CCSGG	4 cut(s)	432, 648, 649, 670
BcoDI	GTCTC	2 cut(s)	109, 361
BfaI	CTAG	6 cut(s)	1709, 1851, 1883, 1991, 2112, 2306
BfoI	RGCGCY	1 cut(s)	392
BfuI	GTATCC	1 cut(s)	1356
BglI	GCCNNNNNGGC	2 cut(s)	21, 917
BisI	GCNGC	7 cut(s)	252, 593, 1217, 1905, 1965, 2046, 2232
BlsI	GCNGC	7 cut(s)	253, 594, 1218, 1906, 1966, 2047, 2233
Bme18I	GGWCC	3 cut(s)	336, 1798, 2292
BmeT110I	CYCGRG	3 cut(s)	326, 486, 647
BmgT120I	GGNCC	6 cut(s)	336, 645, 909, 1376, 1798, 2292
BmiI	GGNNCC	4 cut(s)	338, 612, 2154, 2223
BmsI	GCATC	4 cut(s)	723, 1552, 1606, 1908
BmtI	GCTAGC	1 cut(s)	1886
BpiI	GAAGAC	2 cut(s)	1537, 1833
BplI	GAGNNNNNCTC	2 cut(s)	1204, 1236
BpmI	CTGGAG	1 cut(s)	1404
Bpu10I	CCTNAGC	2 cut(s)	921, 1761
BpuEI	CTTGAG	3 cut(s)	173, 1307, 1313
BpuMI	CCSGG	4 cut(s)	432, 648, 649, 670
BsaAI	YACGTR	1 cut(s)	2228
BsaBI	GATNNNNATC	1 cut(s)	1754
BsaHI	GRCGYC	1 cut(s)	1830
BsaJI	CCNNGG	4 cut(s)	339, 340, 647, 1127
BsaWI	WCCGGW	1 cut(s)	1743
BsaXI	ACNNNNNCTCC	4 cut(s)	599, 629, 2092, 2122
Bsc4I	CCNNNNNNNGG	8 cut(s)	385, 626, 669, 906, 1133, 1388, 1766, 2117
Bse1I	ACTGG	1 cut(s)	2223
Bse3DI	GCAATG	7 cut(s)	10, 548, 798, 863, 1170, 1397, 2055
Bse8I	GATNNNNATC	1 cut(s)	1754
BseBI	CCWGG	6 cut(s)	341, 1128, 1356, 1383, 1731, 1767
BseDI	CCNNGG	4 cut(s)	339, 340, 647, 1127
BseGI	GGATG	6 cut(s)	765, 1120, 1249, 1264, 1567, 1654
BseJI	GATNNNNATC	1 cut(s)	1754
BseLI	CCNNNNNNNGG	8 cut(s)	385, 626, 669, 906, 1133, 1388, 1766, 2117
BseMI	GCAATG	7 cut(s)	10, 548, 798, 863, 1170, 1397, 2055
BseMII	CTCAG	6 cut(s)	406, 815, 935, 1235, 1472, 1926
BseNI	ACTGG	1 cut(s)	2223
BsePI	GCGCGC	2 cut(s)	271, 273
BseX3I	CGGCCG	1 cut(s)	602
BseXI	GCAGC	5 cut(s)	1203, 1891, 1951, 2032, 2243
BseYI	CCCAGC	1 cut(s)	378
BsgI	GTGCAG	3 cut(s)	1896, 1950, 2250
Bsh1236I	CGCG	3 cut(s)	273, 275, 870
Bsh1285I	CGRYCG	1 cut(s)	605
BshFI	GGCC	7 cut(s)	604, 646, 899, 911, 1377, 1454, 2276
BshNI	GGYRCC	2 cut(s)	610, 2221
BsiEI	CGRYCG	1 cut(s)	605
BsiHKAI	GWGCWC	3 cut(s)	1189, 1204, 1507
BsiHKCI	CYCGRG	3 cut(s)	326, 486, 647
BsiSI	CCGG	5 cut(s)	431, 605, 648, 669, 1744
BslFI	GGGAC	2 cut(s)	322, 357
BslI	CCNNNNNNNGG	8 cut(s)	385, 626, 669, 906, 1133, 1388, 1766, 2117
BsmAI	GTCTC	2 cut(s)	109, 361
BsmBI	CGTCTC	2 cut(s)	109, 361
BsmFI	GGGAC	2 cut(s)	322, 357
BsmI	GAATGC	2 cut(s)	1992, 2181
BsnI	GGCC	7 cut(s)	604, 646, 899, 911, 1377, 1454, 2276
BsoBI	CYCGRG	3 cut(s)	326, 486, 647
Bsp1286I	GDGCHC	4 cut(s)	26, 1189, 1204, 1507
Bsp143I	GATC	8 cut(s)	1032, 1587, 1674, 1711, 2077, 2152, 2200, 2257
BspACI	CCGC	7 cut(s)	77, 135, 243, 252, 590, 593, 1043
BspANI	GGCC	7 cut(s)	604, 646, 899, 911, 1377, 1454, 2276
BspCNI	CTCAG	6 cut(s)	405, 814, 934, 1234, 1471, 1927
BspFNI	CGCG	3 cut(s)	273, 275, 870
BspHI	TCATGA	1 cut(s)	1173
BspLI	GGNNCC	4 cut(s)	338, 612, 2154, 2223
BspOI	GCTAGC	1 cut(s)	1886
BspPI	GGATC	4 cut(s)	1706, 2147, 2160, 2265
BspT107I	GGYRCC	2 cut(s)	610, 2221
BsrDI	GCAATG	7 cut(s)	10, 548, 798, 863, 1170, 1397, 2055
BsrI	ACTGG	1 cut(s)	2223
BssECI	CCNNGG	4 cut(s)	339, 340, 647, 1127
BssHII	GCGCGC	2 cut(s)	271, 273
BssMI	GATC	8 cut(s)	1032, 1587, 1674, 1711, 2077, 2152, 2200, 2257
BssNI	GRCGYC	1 cut(s)	1830
BssSI	CACGAG	2 cut(s)	1188, 1494
Bst2BI	CACGAG	2 cut(s)	1188, 1494
Bst2UI	CCWGG	6 cut(s)	341, 1128, 1356, 1383, 1731, 1767
Bst4CI	ACNGT	6 cut(s)	103, 211, 502, 982, 1737, 2212
Bst6I	CTCTTC	3 cut(s)	1333, 1567, 1657
BstACI	GRCGYC	1 cut(s)	1830
BstAPI	GCANNNNNTGC	1 cut(s)	2228
BstBAI	YACGTR	1 cut(s)	2228
BstC8I	GCNNGC	6 cut(s)	273, 275, 1404, 1429, 1807, 1884
BstDEI	CTNAG	9 cut(s)	392, 801, 921, 989, 1221, 1458, 1761, 1935, 2081
BstF5I	GGATG	6 cut(s)	765, 1120, 1249, 1264, 1567, 1654
BstFNI	CGCG	3 cut(s)	273, 275, 870
BstH2I	RGCGCY	1 cut(s)	392
BstHHI	GCGC	5 cut(s)	273, 275, 277, 391, 870
BstKTI	GATC	8 cut(s)	1035, 1590, 1677, 1714, 2080, 2155, 2203, 2260
BstMAI	GTCTC	2 cut(s)	109, 361
BstMBI	GATC	8 cut(s)	1032, 1587, 1674, 1711, 2077, 2152, 2200, 2257
BstMCI	CGRYCG	1 cut(s)	605
BstNI	CCWGG	6 cut(s)	341, 1128, 1356, 1383, 1731, 1767
BstNSI	RCATGY	1 cut(s)	419
BstUI	CGCG	3 cut(s)	273, 275, 870
BstV1I	GCAGC	5 cut(s)	1203, 1891, 1951, 2032, 2243
BstV2I	GAAGAC	2 cut(s)	1537, 1833
BstX2I	RGATCY	2 cut(s)	1711, 2152
BstYI	RGATCY	2 cut(s)	1711, 2152
BstZI	CGGCCG	1 cut(s)	602
BsuI	GTATCC	1 cut(s)	1356
BsuRI	GGCC	7 cut(s)	604, 646, 899, 911, 1377, 1454, 2276
BtsCI	GGATG	6 cut(s)	765, 1120, 1249, 1264, 1567, 1654
BtsIMutI	CAGTG	1 cut(s)	2208
Cac8I	GCNNGC	6 cut(s)	273, 275, 1404, 1429, 1807, 1884
CaiI	CAGNNNCTG	1 cut(s)	461
CciI	TCATGA	1 cut(s)	1173
CfoI	GCGC	5 cut(s)	273, 275, 277, 391, 870
Cfr13I	GGNCC	6 cut(s)	336, 645, 909, 1376, 1798, 2292
Cfr9I	CCCGGG	1 cut(s)	647
CsiI	ACCWGGT	1 cut(s)	1354
Csp6I	GTAC	2 cut(s)	373, 622
CviAII	CATG	7 cut(s)	333, 416, 1174, 1319, 1802, 1915, 2019
CviQI	GTAC	2 cut(s)	373, 622
DdeI	CTNAG	9 cut(s)	392, 801, 921, 989, 1221, 1458, 1761, 1935, 2081
DpnI	GATC	8 cut(s)	1034, 1589, 1676, 1713, 2079, 2154, 2202, 2259
DpnII	GATC	8 cut(s)	1032, 1587, 1674, 1711, 2077, 2152, 2200, 2257
DraIII	CACNNNGTG	1 cut(s)	2228
EaeI	YGGCCR	2 cut(s)	602, 897
EagI	CGGCCG	1 cut(s)	602
Eam1104I	CTCTTC	3 cut(s)	1333, 1567, 1657
EarI	CTCTTC	3 cut(s)	1333, 1567, 1657
EciI	GGCGGA	2 cut(s)	579, 1058
Ecl136II	GAGCTC	1 cut(s)	1202
EclXI	CGGCCG	1 cut(s)	602
Eco24I	GRGCYC	2 cut(s)	26, 1204
Eco47I	GGWCC	3 cut(s)	336, 1798, 2292
Eco52I	CGGCCG	1 cut(s)	602
Eco53kI	GAGCTC	1 cut(s)	1202
Eco57I	CTGAAG	3 cut(s)	431, 1049, 1845
Eco72I	CACGTG	1 cut(s)	2228
Eco88I	CYCGRG	3 cut(s)	326, 486, 647
EcoICRI	GAGCTC	1 cut(s)	1202
EcoRI	GAATTC	1 cut(s)	366
EcoRII	CCWGG	6 cut(s)	339, 1126, 1354, 1381, 1729, 1765
EcoT38I	GRGCYC	2 cut(s)	26, 1204
Esp3I	CGTCTC	2 cut(s)	109, 361
FaeI	CATG	7 cut(s)	336, 419, 1177, 1322, 1805, 1918, 2022
FalI	AAGNNNNNCTT	2 cut(s)	2163, 2195
FaqI	GGGAC	2 cut(s)	322, 357
FatI	CATG	7 cut(s)	332, 415, 1173, 1318, 1801, 1914, 2018
FauI	CCCGC	2 cut(s)	84, 142
FbaI	TGATCA	2 cut(s)	1587, 1674
FblI	GTMKAC	2 cut(s)	287, 1833
Fnu4HI	GCNGC	7 cut(s)	252, 593, 1217, 1905, 1965, 2046, 2232
FokI	GGATG	6 cut(s)	772, 1127, 1256, 1271, 1574, 1661
FriOI	GRGCYC	2 cut(s)	26, 1204
Fsp4HI	GCNGC	7 cut(s)	252, 593, 1217, 1905, 1965, 2046, 2232
FspBI	CTAG	6 cut(s)	1709, 1851, 1883, 1991, 2112, 2306
GlaI	GCGC	5 cut(s)	272, 274, 276, 390, 869
GluI	GCNGC	7 cut(s)	252, 593, 1217, 1905, 1965, 2046, 2232
GsaI	CCCAGC	1 cut(s)	382
GsuI	CTGGAG	1 cut(s)	1404
HaeII	RGCGCY	1 cut(s)	392
HaeIII	GGCC	7 cut(s)	604, 646, 899, 911, 1377, 1454, 2276
HapII	CCGG	5 cut(s)	431, 605, 648, 669, 1744
HhaI	GCGC	5 cut(s)	273, 275, 277, 391, 870
Hin1I	GRCGYC	1 cut(s)	1830
Hin1II	CATG	7 cut(s)	336, 419, 1177, 1322, 1805, 1918, 2022
Hin6I	GCGC	5 cut(s)	271, 273, 275, 389, 868
HinP1I	GCGC	5 cut(s)	271, 273, 275, 389, 868
HincII	GTYRAC	1 cut(s)	1834
HindII	GTYRAC	1 cut(s)	1834
HindIII	AAGCTT	1 cut(s)	306
HinfI	GANTC	6 cut(s)	329, 345, 482, 563, 860, 1144
HpaII	CCGG	5 cut(s)	431, 605, 648, 669, 1744
HphI	GGTGA	7 cut(s)	58, 199, 1115, 1148, 1334, 1433, 2264
Hpy166II	GTNNAC	7 cut(s)	288, 375, 1254, 1435, 1604, 1834, 2068
Hpy188I	TCNGA	7 cut(s)	304, 804, 1155, 1502, 1727, 2168, 2262
Hpy8I	GTNNAC	7 cut(s)	288, 375, 1254, 1435, 1604, 1834, 2068
Hpy99I	CGWCG	5 cut(s)	143, 251, 619, 1200, 1835
HpyCH4III	ACNGT	6 cut(s)	103, 211, 502, 982, 1737, 2212
HpyCH4IV	ACGT	4 cut(s)	1476, 1612, 1830, 2227
HpyF3I	CTNAG	9 cut(s)	392, 801, 921, 989, 1221, 1458, 1761, 1935, 2081
HpySE526I	ACGT	4 cut(s)	1476, 1612, 1830, 2227
Hsp92I	GRCGYC	1 cut(s)	1830
Hsp92II	CATG	7 cut(s)	336, 419, 1177, 1322, 1805, 1918, 2022
HspAI	GCGC	5 cut(s)	271, 273, 275, 389, 868
Ksp22I	TGATCA	2 cut(s)	1587, 1674
Kzo9I	GATC	8 cut(s)	1032, 1587, 1674, 1711, 2077, 2152, 2200, 2257
LmnI	GCTCC	4 cut(s)	538, 1638, 2113, 2199
Lsp1109I	GCAGC	5 cut(s)	1203, 1891, 1951, 2032, 2243
LweI	GCATC	4 cut(s)	723, 1552, 1606, 1908
MabI	ACCWGGT	1 cut(s)	1354
MaeI	CTAG	6 cut(s)	1709, 1851, 1883, 1991, 2112, 2306
MaeII	ACGT	4 cut(s)	1476, 1612, 1830, 2227
MaeIII	GTNAC	2 cut(s)	199, 2098
MalI	GATC	8 cut(s)	1034, 1589, 1676, 1713, 2079, 2154, 2202, 2259
MboI	GATC	8 cut(s)	1032, 1587, 1674, 1711, 2077, 2152, 2200, 2257
MfeI	CAATTG	1 cut(s)	2103
MflI	RGATCY	2 cut(s)	1711, 2152
MhlI	GDGCHC	4 cut(s)	26, 1189, 1204, 1507
MlsI	TGGCCA	1 cut(s)	899
MluNI	TGGCCA	1 cut(s)	899
MlyI	GAGTC	3 cut(s)	338, 339, 572
MmeI	TCCRAC	3 cut(s)	1056, 1539, 1549
Mox20I	TGGCCA	1 cut(s)	899
MscI	TGGCCA	1 cut(s)	899
MseI	TTAA	5 cut(s)	576, 597, 1347, 1626, 2037
MslI	CAYNNNNRTG	1 cut(s)	932
Msp20I	TGGCCA	1 cut(s)	899
MspA1I	CMGCKG	2 cut(s)	382, 2234
MspI	CCGG	5 cut(s)	431, 605, 648, 669, 1744
MunI	CAATTG	1 cut(s)	2103
Mva1269I	GAATGC	2 cut(s)	1992, 2181
MvaI	CCWGG	6 cut(s)	341, 1128, 1356, 1383, 1731, 1767
MvnI	CGCG	3 cut(s)	273, 275, 870
NciI	CCSGG	4 cut(s)	432, 648, 649, 670
NdeII	GATC	8 cut(s)	1032, 1587, 1674, 1711, 2077, 2152, 2200, 2257
NheI	GCTAGC	1 cut(s)	1882
NlaIII	CATG	7 cut(s)	336, 419, 1177, 1322, 1805, 1918, 2022
NlaIV	GGNNCC	4 cut(s)	338, 612, 2154, 2223
NmeAIII	GCCGAG	1 cut(s)	2164
NmuCI	GTSAC	1 cut(s)	2098
NspI	RCATGY	1 cut(s)	419
OliI	CACNNNNGTG	1 cut(s)	932
PaeR7I	CTCGAG	1 cut(s)	326
PagI	TCATGA	1 cut(s)	1173
PasI	CCCWGGG	1 cut(s)	340
PauI	GCGCGC	2 cut(s)	271, 273
PcsI	WCGNNNNNNNCGW	2 cut(s)	135, 1195
PctI	GAATGC	2 cut(s)	1992, 2181
PfeI	GAWTC	3 cut(s)	482, 860, 1144
PflMI	CCANNNNNTGG	2 cut(s)	385, 906
PfoI	TCCNGGA	2 cut(s)	668, 1381
PkrI	GCNGC	7 cut(s)	253, 594, 1218, 1906, 1966, 2047, 2233
PleI	GAGTC	3 cut(s)	337, 339, 571
PmaCI	CACGTG	1 cut(s)	2228
PmlI	CACGTG	1 cut(s)	2228
PpsI	GAGTC	3 cut(s)	337, 339, 571
Ppu21I	YACGTR	1 cut(s)	2228
PshBI	ATTAAT	1 cut(s)	2037
Psp124BI	GAGCTC	1 cut(s)	1204
Psp6I	CCWGG	6 cut(s)	339, 1126, 1354, 1381, 1729, 1765
PspCI	CACGTG	1 cut(s)	2228
PspFI	CCCAGC	1 cut(s)	378
PspGI	CCWGG	6 cut(s)	339, 1126, 1354, 1381, 1729, 1765
PspN4I	GGNNCC	4 cut(s)	338, 612, 2154, 2223
PspPI	GGNCC	6 cut(s)	336, 645, 909, 1376, 1798, 2292
PspXI	VCTCGAGB	1 cut(s)	326
PstNI	CAGNNNCTG	1 cut(s)	461
PsuI	RGATCY	2 cut(s)	1711, 2152
PteI	GCGCGC	2 cut(s)	271, 273
PvuII	CAGCTG	2 cut(s)	382, 2234
RsaI	GTAC	2 cut(s)	374, 623
RsaNI	GTAC	2 cut(s)	373, 622
RseI	CAYNNNNRTG	1 cut(s)	932
SacI	GAGCTC	1 cut(s)	1204
SalI	GTCGAC	1 cut(s)	1832
SaqAI	TTAA	5 cut(s)	576, 597, 1347, 1626, 2037
SatI	GCNGC	7 cut(s)	252, 593, 1217, 1905, 1965, 2046, 2232
Sau3AI	GATC	8 cut(s)	1032, 1587, 1674, 1711, 2077, 2152, 2200, 2257
Sau96I	GGNCC	6 cut(s)	336, 645, 909, 1376, 1798, 2292
SchI	GAGTC	3 cut(s)	338, 339, 572
SduI	GDGCHC	4 cut(s)	26, 1189, 1204, 1507
SexAI	ACCWGGT	1 cut(s)	1354
SfaNI	GCATC	4 cut(s)	723, 1552, 1606, 1908
Sfr274I	CTCGAG	1 cut(s)	326
SinI	GGWCC	3 cut(s)	336, 1798, 2292
SlaI	CTCGAG	1 cut(s)	326
SmaI	CCCGGG	1 cut(s)	649
SmiMI	CAYNNNNRTG	1 cut(s)	932
SmlI	CTYRAG	4 cut(s)	188, 326, 1286, 1292
SmoI	CTYRAG	4 cut(s)	188, 326, 1286, 1292
SsiI	CCGC	7 cut(s)	77, 135, 243, 252, 590, 593, 1043
SspI	AATATT	1 cut(s)	2089
SspMI	CTAG	6 cut(s)	1709, 1851, 1883, 1991, 2112, 2306
SstI	GAGCTC	1 cut(s)	1204
TaaI	ACNGT	6 cut(s)	103, 211, 502, 982, 1737, 2212
TaiI	ACGT	4 cut(s)	1479, 1615, 1833, 2230
TaqI	TCGA	9 cut(s)	180, 327, 364, 477, 1035, 1195, 1833, 2122, 2199
TauI	GCSGC	2 cut(s)	254, 595
TfiI	GAWTC	3 cut(s)	482, 860, 1144
Tru1I	TTAA	5 cut(s)	576, 597, 1347, 1626, 2037
Tru9I	TTAA	5 cut(s)	576, 597, 1347, 1626, 2037
TscAI	CASTG	1 cut(s)	2215
TseFI	GTSAC	1 cut(s)	2098
TseI	GCWGC	5 cut(s)	1216, 1904, 1964, 2045, 2231
Tsp45I	GTSAC	1 cut(s)	2098
TspDTI	ATGAA	8 cut(s)	165, 809, 852, 1162, 1190, 1537, 2159, 2253
TspGWI	ACGGA	3 cut(s)	360, 892, 1271
TspMI	CCCGGG	1 cut(s)	647
TspRI	CASTG	1 cut(s)	2215
Van91I	CCANNNNNTGG	2 cut(s)	385, 906
VpaK11BI	GGWCC	3 cut(s)	336, 1798, 2292
VspI	ATTAAT	1 cut(s)	2037
XapI	RAATTY	3 cut(s)	366, 1788, 2286
XbaI	TCTAGA	1 cut(s)	1708
XceI	RCATGY	1 cut(s)	419
XhoI	CTCGAG	1 cut(s)	326
XmaI	CCCGGG	1 cut(s)	647
XmiI	GTMKAC	2 cut(s)	287, 1833
XspI	CTAG	6 cut(s)	1709, 1851, 1883, 1991, 2112, 2306
ZraI	GACGTC	1 cut(s)	1831

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.