AT3G17430

phosphate

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0007832
Physical Location & Seq
Forward (+)
5965869 .. 5969296
3428 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G17430.2

Sequence Viewer

Length: 1128 bp
ATGGCAAAGATGATAAACAAGACGCTTGTATTAACTTATATCTACTTGCTGATCTACATTATACTTTCTTCAGGAGTTATACTGTACAATAAGTGGGTTTTATCCCCAAAATACTTCAATTTTCCACTTCCTATAACGCTGACAATGATCCATATGGGGTTTGCTGGATTCGTGGCTTTCCTTCTTATTCGTGTCTTCAAGGTTGTAGCTCCGGTTAAAATGACATTTGAAATATATGCAACCTGTGTGGTACCTATAAGTGCATTCTTTGCATCAAGTCTCTGGTTTGGAAATACTGCATATTTGCACATTTCTGTTGCCTTCATTCAGATGCTGAAAGCTCTAATGCCAGTAGCGACATTTATCATGGCAGTTGTTTGTGGCACTGACAAACCAAGGTGTGATGTGTTCTCGAACATGTTGCTGGTCAGTGTTGGAGTTGTGATATCTTCTTATGGGGAAATTCATTTCAACATAGTTGGCACAGTCTATCAGGTGACAGGCATCTTTGCTGAAGCACTTAGACTGGTGCTAACTCAAGTTCTTCTCCAGAAGAAGGGTTTGACATTGAACCCTATTACCAGCTTGTATTACATAGCTCCCTGCAGTTTTGTTTTTCTGGCCTTACCTTGGTATGTGTTAGAGAAACCCACAATGGAAGTTTCACAGATCCAATTCAACTTCTGGATATTTTTCTCCAATGCTCTATGTGCTCTTGCCTTGAACTTCTCCATATTCTTAGTCATTGGGAGAACAGGTGCAGTAACCATCCGGGTGGCTGGTGTTCTCAAAGACTGGATTCTTATAGCCCTCTCAACCGTCATTTTCCCCGAGTCCACAATCACTGGGTTGAATATCACTGGATACGCAATAGCGCTATGTGGTGTCGTCATGTACAATTACATAAAAGTAAGGGATGTGAAGGCGTCTCAACCAACAGCTGACAGTCTTCCAGATCGAATCAATAAGGAGTACAAGATGGAGAAGAAGTCTTCGGATAAATTCAATCCTAACGACAGTGTGGAGATCCCAAGAGTAGGAGGAGAGGTAAACGACGAGGAAGCCCCTTTGATCACATCCCGGTTGTCTCATATTGGTCGGACGCAGCTCGGAAATCACGCTGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0012505 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TPT

Protein Analysis

375

Amino Acids

41.7

Weight (kDa)

9.08

Isoelectric Point (pI)

32.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPT PF03151 14 - 300 1.6e-21 Triose-phosphate Transporter family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 250
AccB1I GGYRCC 1 cut(s) 250
AclWI GGATC 3 cut(s) 142, 664, 1021
AcsI RAATTY 2 cut(s) 462, 1001
AcuI CTGAAG 2 cut(s) 54, 534
AcyI GRCGYC 1 cut(s) 926
AfaI GTAC 4 cut(s) 86, 252, 896, 974
AfeI AGCGCT 1 cut(s) 876
AfiI CCNNNNNNNGG 3 cut(s) 556, 630, 1037
AflIII ACRYGT 1 cut(s) 417
AgsI TTSAA 9 cut(s) 118, 199, 230, 472, 571, 679, 724, 853, 1006
AluBI AGCT 6 cut(s) 209, 341, 585, 599, 941, 1108
AluI AGCT 6 cut(s) 209, 341, 585, 599, 941, 1108
Alw21I GWGCWC 1 cut(s) 715
Alw26I GTCTC 3 cut(s) 284, 933, 1092
AlwI GGATC 3 cut(s) 142, 664, 1021
AlwNI CAGNNNCTG 1 cut(s) 334
Ama87I CYCGRG 1 cut(s) 830
Aor51HI AGCGCT 1 cut(s) 876
AoxI GGCC 1 cut(s) 621
ApeKI GCWGC 2 cut(s) 1105, 1121
ApoI RAATTY 2 cut(s) 462, 1001
Asp718I GGTACC 1 cut(s) 250
AspLEI GCGC 1 cut(s) 877
AsuC2I CCSGG 2 cut(s) 773, 1081
AsuHPI GGTGA 1 cut(s) 508
AvaI CYCGRG 1 cut(s) 830
BanI GGYRCC 1 cut(s) 250
BbsI GAAGAC 3 cut(s) 187, 941, 984
Bbv12I GWGCWC 1 cut(s) 715
BbvI GCAGC 2 cut(s) 1108, 1117
BccI CCATC 2 cut(s) 776, 973
BcgI CGANNNNNNTGC 2 cut(s) 403, 437
BciVI GTATCC 1 cut(s) 857
BclI TGATCA 1 cut(s) 1071
BcnI CCSGG 2 cut(s) 773, 1081
BcoDI GTCTC 3 cut(s) 284, 933, 1092
BfmI CTRYAG 1 cut(s) 604
BfoI RGCGCY 1 cut(s) 878
BfuI GTATCC 1 cut(s) 857
BisI GCNGC 2 cut(s) 1106, 1122
BlsI GCNGC 2 cut(s) 1107, 1123
Bme1390I CCNGG 2 cut(s) 773, 1081
BmeT110I CYCGRG 1 cut(s) 830
BmiI GGNNCC 1 cut(s) 252
BmrFI CCNGG 2 cut(s) 773, 1081
BmrI ACTGGG 1 cut(s) 855
BmsI GCATC 3 cut(s) 281, 321, 513
BmuI ACTGGG 1 cut(s) 855
BpiI GAAGAC 3 cut(s) 187, 941, 984
BpmI CTGGAG 1 cut(s) 533
BpuEI CTTGAG 1 cut(s) 522
BpuMI CCSGG 2 cut(s) 773, 1081
BsaHI GRCGYC 1 cut(s) 926
BsaJI CCNNGG 2 cut(s) 395, 629
BsaWI WCCGGW 1 cut(s) 211
BsaXI ACNNNNNCTCC 6 cut(s) 742, 772, 974, 1004, 1032, 1062
Bsc4I CCNNNNNNNGG 3 cut(s) 556, 630, 1037
Bse1I ACTGG 5 cut(s) 350, 531, 800, 850, 865
BseDI CCNNGG 2 cut(s) 395, 629
BseGI GGATG 3 cut(s) 768, 922, 1076
BseLI CCNNNNNNNGG 3 cut(s) 556, 630, 1037
BseNI ACTGG 5 cut(s) 350, 531, 800, 850, 865
BseRI GAGGAG 1 cut(s) 1056
BseXI GCAGC 2 cut(s) 1108, 1117
BsgI GTGCAG 1 cut(s) 780
BshFI GGCC 1 cut(s) 623
BshNI GGYRCC 1 cut(s) 250
BsiHKAI GWGCWC 1 cut(s) 715
BsiHKCI CYCGRG 1 cut(s) 830
BsiSI CCGG 3 cut(s) 212, 772, 1081
BslI CCNNNNNNNGG 3 cut(s) 556, 630, 1037
BsmAI GTCTC 3 cut(s) 284, 933, 1092
BsmBI CGTCTC 1 cut(s) 933
BsmI GAATGC 1 cut(s) 263
BsnI GGCC 1 cut(s) 623
BsoBI CYCGRG 1 cut(s) 830
Bsp1286I GDGCHC 1 cut(s) 715
Bsp1407I TGTACA 2 cut(s) 84, 894
Bsp143I GATC 6 cut(s) 51, 147, 669, 955, 1026, 1071
BspANI GGCC 1 cut(s) 623
BspLI GGNNCC 1 cut(s) 252
BspMAI CTGCAG 1 cut(s) 608
BspPI GGATC 3 cut(s) 142, 664, 1021
BspT107I GGYRCC 1 cut(s) 250
BsrGI TGTACA 2 cut(s) 84, 894
BsrI ACTGG 5 cut(s) 350, 531, 800, 850, 865
BssECI CCNNGG 2 cut(s) 395, 629
BssMI GATC 6 cut(s) 51, 147, 669, 955, 1026, 1071
BssNI GRCGYC 1 cut(s) 926
BssT1I CCWWGG 2 cut(s) 395, 629
Bst4CI ACNGT 5 cut(s) 84, 487, 820, 947, 1019
BstACI GRCGYC 1 cut(s) 926
BstAPI GCANNNNNTGC 1 cut(s) 269
BstAUI TGTACA 2 cut(s) 84, 894
BstDEI CTNAG 2 cut(s) 521, 739
BstF5I GGATG 3 cut(s) 768, 922, 1076
BstH2I RGCGCY 1 cut(s) 878
BstHHI GCGC 1 cut(s) 877
BstKTI GATC 6 cut(s) 54, 150, 672, 958, 1029, 1074
BstMAI GTCTC 3 cut(s) 284, 933, 1092
BstMBI GATC 6 cut(s) 51, 147, 669, 955, 1026, 1071
BstMWI GCNNNNNNNGC 2 cut(s) 269, 710
BstNSI RCATGY 1 cut(s) 421
BstSCI CCNGG 2 cut(s) 771, 1079
BstSFI CTRYAG 1 cut(s) 604
BstV1I GCAGC 2 cut(s) 1108, 1117
BstV2I GAAGAC 3 cut(s) 187, 941, 984
BstX2I RGATCY 2 cut(s) 669, 1026
BstXI CCANNNNNNTGG 1 cut(s) 775
BstYI RGATCY 2 cut(s) 669, 1026
BsuI GTATCC 1 cut(s) 857
BsuRI GGCC 1 cut(s) 623
BtsCI GGATG 3 cut(s) 768, 922, 1076
BtsIMutI CAGTG 5 cut(s) 384, 436, 843, 858, 1024
CaiI CAGNNNCTG 1 cut(s) 334
CfoI GCGC 1 cut(s) 877
CseI GACGC 3 cut(s) 31, 915, 1111
Csp6I GTAC 4 cut(s) 85, 251, 895, 973
CspCI CAANNNNNGTGG 2 cut(s) 228, 263
CviAII CATG 3 cut(s) 367, 418, 892
CviQI GTAC 4 cut(s) 85, 251, 895, 973
DdeI CTNAG 2 cut(s) 521, 739
DpnI GATC 6 cut(s) 53, 149, 671, 957, 1028, 1073
DpnII GATC 6 cut(s) 51, 147, 669, 955, 1026, 1071
Eco130I CCWWGG 2 cut(s) 395, 629
Eco32I GATATC 1 cut(s) 447
Eco47III AGCGCT 1 cut(s) 876
Eco57I CTGAAG 2 cut(s) 54, 534
Eco88I CYCGRG 1 cut(s) 830
EcoRV GATATC 1 cut(s) 447
EcoT14I CCWWGG 2 cut(s) 395, 629
ErhI CCWWGG 2 cut(s) 395, 629
Esp3I CGTCTC 1 cut(s) 933
FaeI CATG 3 cut(s) 370, 421, 895
FatI CATG 3 cut(s) 366, 417, 891
FauNDI CATATG 1 cut(s) 153
FbaI TGATCA 1 cut(s) 1071
Fnu4HI GCNGC 2 cut(s) 1106, 1122
FokI GGATG 3 cut(s) 755, 929, 1063
Fsp4HI GCNGC 2 cut(s) 1106, 1122
GlaI GCGC 1 cut(s) 876
GluI GCNGC 2 cut(s) 1106, 1122
GsuI CTGGAG 1 cut(s) 533
HaeII RGCGCY 1 cut(s) 878
HaeIII GGCC 1 cut(s) 623
HapII CCGG 3 cut(s) 212, 772, 1081
HgaI GACGC 3 cut(s) 31, 915, 1111
HhaI GCGC 1 cut(s) 877
Hin1I GRCGYC 1 cut(s) 926
Hin1II CATG 3 cut(s) 370, 421, 895
Hin6I GCGC 1 cut(s) 875
HinP1I GCGC 1 cut(s) 875
HinfI GANTC 4 cut(s) 168, 799, 833, 960
HpaII CCGG 3 cut(s) 212, 772, 1081
HphI GGTGA 1 cut(s) 508
Hpy166II GTNNAC 2 cut(s) 837, 1051
Hpy188I TCNGA 4 cut(s) 330, 997, 1101, 1112
Hpy188III TCNNGA 5 cut(s) 72, 412, 550, 685, 953
Hpy8I GTNNAC 2 cut(s) 837, 1051
Hpy99I CGWCG 1 cut(s) 1058
HpyAV CCTTC 4 cut(s) 191, 331, 550, 916
HpyCH4III ACNGT 5 cut(s) 84, 487, 820, 947, 1019
HpyCH4V TGCA 7 cut(s) 239, 263, 272, 299, 307, 606, 761
HpyF10VI GCNNNNNNNGC 2 cut(s) 269, 710
HpyF3I CTNAG 2 cut(s) 521, 739
Hsp92I GRCGYC 1 cut(s) 926
Hsp92II CATG 3 cut(s) 370, 421, 895
HspAI GCGC 1 cut(s) 875
KpnI GGTACC 1 cut(s) 254
Ksp22I TGATCA 1 cut(s) 1071
Kzo9I GATC 6 cut(s) 51, 147, 669, 955, 1026, 1071
LmnI GCTCC 2 cut(s) 214, 604
Lsp1109I GCAGC 2 cut(s) 1108, 1117
LweI GCATC 3 cut(s) 281, 321, 513
MaeIII GTNAC 2 cut(s) 496, 763
MalI GATC 6 cut(s) 53, 149, 671, 957, 1028, 1073
MboI GATC 6 cut(s) 51, 147, 669, 955, 1026, 1071
MboII GAAGA 8 cut(s) 60, 187, 441, 536, 565, 941, 984, 997
MflI RGATCY 2 cut(s) 669, 1026
MhlI GDGCHC 1 cut(s) 715
MluCI AATT 5 cut(s) 118, 462, 674, 898, 1001
MlyI GAGTC 1 cut(s) 842
MmeI TCCRAC 2 cut(s) 415, 1079
MnlI CCTC 4 cut(s) 821, 1034, 1039, 1051
MseI TTAA 3 cut(s) 32, 216, 1126
MslI CAYNNNNRTG 2 cut(s) 329, 773
MspA1I CMGCKG 1 cut(s) 941
MspI CCGG 3 cut(s) 212, 772, 1081
MspR9I CCNGG 2 cut(s) 773, 1081
Mva1269I GAATGC 1 cut(s) 263
MwoI GCNNNNNNNGC 2 cut(s) 269, 710
NciI CCSGG 2 cut(s) 773, 1081
NdeI CATATG 1 cut(s) 153
NdeII GATC 6 cut(s) 51, 147, 669, 955, 1026, 1071
NlaIII CATG 3 cut(s) 370, 421, 895
NlaIV GGNNCC 1 cut(s) 252
NmuCI GTSAC 1 cut(s) 496
NspI RCATGY 1 cut(s) 421
PciI ACATGT 1 cut(s) 417
PctI GAATGC 1 cut(s) 263
PfeI GAWTC 3 cut(s) 168, 799, 960
PkrI GCNGC 2 cut(s) 1107, 1123
PleI GAGTC 1 cut(s) 841
PpsI GAGTC 1 cut(s) 841
PscI ACATGT 1 cut(s) 417
PspN4I GGNNCC 1 cut(s) 252
PstI CTGCAG 1 cut(s) 608
PstNI CAGNNNCTG 1 cut(s) 334
PsuI RGATCY 2 cut(s) 669, 1026
PvuII CAGCTG 1 cut(s) 941
RsaI GTAC 4 cut(s) 86, 252, 896, 974
RsaNI GTAC 4 cut(s) 85, 251, 895, 973
RseI CAYNNNNRTG 2 cut(s) 329, 773
SaqAI TTAA 3 cut(s) 32, 216, 1126
SatI GCNGC 2 cut(s) 1106, 1122
Sau3AI GATC 6 cut(s) 51, 147, 669, 955, 1026, 1071
SchI GAGTC 1 cut(s) 842
ScrFI CCNGG 2 cut(s) 773, 1081
SduI GDGCHC 1 cut(s) 715
SfaNI GCATC 3 cut(s) 281, 321, 513
SfcI CTRYAG 1 cut(s) 604
SmiMI CAYNNNNRTG 2 cut(s) 329, 773
SmlI CTYRAG 1 cut(s) 537
SmoI CTYRAG 1 cut(s) 537
Sse9I AATT 5 cut(s) 118, 462, 674, 898, 1001
StyD4I CCNGG 2 cut(s) 771, 1079
StyI CCWWGG 2 cut(s) 395, 629
TaaI ACNGT 5 cut(s) 84, 487, 820, 947, 1019
TaqI TCGA 2 cut(s) 413, 958
TasI AATT 5 cut(s) 118, 462, 674, 898, 1001
TatI WGTACW 3 cut(s) 84, 894, 972
TfiI GAWTC 3 cut(s) 168, 799, 960
Tru1I TTAA 3 cut(s) 32, 216, 1126
Tru9I TTAA 3 cut(s) 32, 216, 1126
TscAI CASTG 5 cut(s) 391, 436, 850, 865, 1024
TseFI GTSAC 1 cut(s) 496
TseI GCWGC 2 cut(s) 1105, 1121
Tsp45I GTSAC 1 cut(s) 496
TspDTI ATGAA 2 cut(s) 313, 455
TspRI CASTG 5 cut(s) 391, 436, 850, 865, 1024
XapI RAATTY 2 cut(s) 462, 1001
XceI RCATGY 1 cut(s) 421
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.