Autophagy-related protein 2 CAD motif
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G19190 AT3G19190 AT3G19190 |
| fragaria_vesca | FvH4_2g06220 |
| malus_domestica | MD05G1079500.v1.1 MD10G1093800.v1.1 |
| prunus_persica | Prupe.8G123400_v2.0.a1 Prupe.8G123400_v2.0.a1 |
| pyrus_communis | pycom05g07260 pycom10g07720 |
| rosa_chinensis | RchiOBHm_Chr6g0256971 |
| rosa_laevigata | RLG00000014666 |
| rosa_multiflora | Rmu_co8396705.1_g000001 Rmu_sc0000659.1_g000038 |
| rosa_roxburghii | Rroxscaffold_7G00208380 |
| rosa_rugosa | Rorug05G0576000 Rorug05G0576100 |
| rosa_samantha | Rh6AG094700 Rh6BG085900 Rh6CG082000 Rh6DG077700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 5371 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 3853 |
| AatII | GACGTC | 1 cut(s) | 4265 |
| Acc36I | ACCTGC | 2 cut(s) | 2260, 5371 |
| Acc65I | GGTACC | 2 cut(s) | 3928, 4081 |
| AccB1I | GGYRCC | 4 cut(s) | 1472, 2319, 3928, 4081 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 1108, 1875, 2840 |
| AccI | GTMKAC | 3 cut(s) | 859, 944, 2914 |
| AccII | CGCG | 3 cut(s) | 1456, 2635, 4166 |
| AciI | CCGC | 9 cut(s) | 32, 56, 369, 1456, 2117, 2439, 3189, 4543, 5272 |
| AclI | AACGTT | 1 cut(s) | 186 |
| AcoI | YGGCCR | 4 cut(s) | 1099, 3090, 3603, 4255 |
| AcuI | CTGAAG | 4 cut(s) | 603, 2179, 2747, 5352 |
| AcyI | GRCGYC | 3 cut(s) | 3103, 4262, 4526 |
| AfeI | AGCGCT | 1 cut(s) | 4650 |
| AflII | CTTAAG | 2 cut(s) | 4171, 5216 |
| AflIII | ACRYGT | 3 cut(s) | 1366, 4164, 4804 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 4192 |
| AhlI | ACTAGT | 2 cut(s) | 515, 1649 |
| AjiI | CACGTC | 1 cut(s) | 526 |
| AjnI | CCWGG | 7 cut(s) | 863, 2152, 2776, 3037, 3071, 3105, 4775 |
| AjuI | GAANNNNNNNTTGG | 8 cut(s) | 77, 109, 225, 257, 1182, 1214, 1267, 1299 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 859, 891, 5058, 5090 |
| Alw21I | GWGCWC | 3 cut(s) | 2775, 3657, 5398 |
| Alw44I | GTGCAC | 1 cut(s) | 3653 |
| AlwNI | CAGNNNCTG | 6 cut(s) | 1262, 2929, 3068, 3078, 3938, 5261 |
| Ama87I | CYCGRG | 2 cut(s) | 2022, 4532 |
| Aor51HI | AGCGCT | 1 cut(s) | 4650 |
| ApaLI | GTGCAC | 1 cut(s) | 3653 |
| ArsI | GACNNNNNNTTYG | 8 cut(s) | 440, 472, 1205, 1237, 2978, 3010, 3574, 3606 |
| AseI | ATTAAT | 1 cut(s) | 693 |
| Asp700I | GAANNNNTTC | 6 cut(s) | 977, 2418, 3495, 4116, 4227, 4650 |
| Asp718I | GGTACC | 2 cut(s) | 3928, 4081 |
| AspLEI | GCGC | 1 cut(s) | 4651 |
| AspS9I | GGNCC | 7 cut(s) | 590, 1213, 2446, 4390, 4432, 5483, 5506 |
| AsuC2I | CCSGG | 2 cut(s) | 4394, 5089 |
| AsuNHI | GCTAGC | 1 cut(s) | 2210 |
| AvaI | CYCGRG | 2 cut(s) | 2022, 4532 |
| AvaII | GGWCC | 4 cut(s) | 590, 1213, 4432, 5506 |
| AxyI | CCTNAGG | 1 cut(s) | 2801 |
| BaeGI | GKGCMC | 1 cut(s) | 3657 |
| BalI | TGGCCA | 3 cut(s) | 1101, 3605, 4257 |
| BamHI | GGATCC | 1 cut(s) | 4911 |
| BanI | GGYRCC | 4 cut(s) | 1472, 2319, 3928, 4081 |
| BanII | GRGCYC | 3 cut(s) | 2775, 3240, 5095 |
| BauI | CACGAG | 1 cut(s) | 378 |
| BbsI | GAAGAC | 6 cut(s) | 278, 980, 1152, 1646, 4191, 5174 |
| Bbv12I | GWGCWC | 3 cut(s) | 2775, 3657, 5398 |
| BceAI | ACGGC | 2 cut(s) | 713, 3077 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1537, 1571 |
| BciT130I | CCWGG | 7 cut(s) | 865, 2154, 2778, 3039, 3073, 3107, 4777 |
| BciVI | GTATCC | 3 cut(s) | 1399, 4304, 4390 |
| BclI | TGATCA | 3 cut(s) | 127, 810, 2920 |
| BcnI | CCSGG | 2 cut(s) | 4394, 5089 |
| BcuI | ACTAGT | 2 cut(s) | 515, 1649 |
| BfmI | CTRYAG | 4 cut(s) | 1773, 4275, 5028, 5355 |
| BfoI | RGCGCY | 1 cut(s) | 4652 |
| BfrI | CTTAAG | 2 cut(s) | 4171, 5216 |
| BfuAI | ACCTGC | 2 cut(s) | 2260, 5371 |
| BfuI | GTATCC | 3 cut(s) | 1399, 4304, 4390 |
| BglII | AGATCT | 1 cut(s) | 3376 |
| BlpI | GCTNAGC | 2 cut(s) | 2655, 5202 |
| Bme1390I | CCNGG | 9 cut(s) | 865, 2154, 2778, 3039, 3073, 3107, 4394, 4777, 5089 |
| Bme18I | GGWCC | 4 cut(s) | 590, 1213, 4432, 5506 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 4192 |
| BmeT110I | CYCGRG | 2 cut(s) | 2022, 4532 |
| BmgBI | CACGTC | 1 cut(s) | 526 |
| BmgT120I | GGNCC | 7 cut(s) | 590, 1213, 2446, 4390, 4432, 5483, 5506 |
| BmrFI | CCNGG | 9 cut(s) | 865, 2154, 2778, 3039, 3073, 3107, 4394, 4777, 5089 |
| BmrI | ACTGGG | 2 cut(s) | 3795, 4865 |
| BmtI | GCTAGC | 1 cut(s) | 2214 |
| BmuI | ACTGGG | 2 cut(s) | 3795, 4865 |
| BoxI | GACNNNNGTC | 1 cut(s) | 5174 |
| BpiI | GAAGAC | 6 cut(s) | 278, 980, 1152, 1646, 4191, 5174 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 3158, 3190 |
| BpmI | CTGGAG | 4 cut(s) | 326, 1059, 1419, 3160 |
| Bpu10I | CCTNAGC | 2 cut(s) | 2139, 3410 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 2655, 5202 |
| BpuEI | CTTGAG | 4 cut(s) | 2471, 3147, 4071, 4433 |
| BpuMI | CCSGG | 2 cut(s) | 4394, 5089 |
| Bsa29I | ATCGAT | 1 cut(s) | 462 |
| BsaBI | GATNNNNATC | 1 cut(s) | 3840 |
| BsaHI | GRCGYC | 3 cut(s) | 3103, 4262, 4526 |
| BsaI | GGTCTC | 2 cut(s) | 1501, 4969 |
| BsaWI | WCCGGW | 1 cut(s) | 1144 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 717, 747, 1392, 1422, 3524, 3554 |
| Bse1I | ACTGG | 6 cut(s) | 1216, 1947, 3790, 4349, 4860, 5058 |
| Bse21I | CCTNAGG | 1 cut(s) | 2801 |
| Bse3DI | GCAATG | 4 cut(s) | 18, 1245, 2023, 5141 |
| Bse8I | GATNNNNATC | 1 cut(s) | 3840 |
| BseBI | CCWGG | 7 cut(s) | 865, 2154, 2778, 3039, 3073, 3107, 4777 |
| BseCI | ATCGAT | 1 cut(s) | 462 |
| BseGI | GGATG | 7 cut(s) | 757, 904, 1189, 1814, 1970, 3977, 4240 |
| BseJI | GATNNNNATC | 1 cut(s) | 3840 |
| BseMI | GCAATG | 4 cut(s) | 18, 1245, 2023, 5141 |
| BseNI | ACTGG | 6 cut(s) | 1216, 1947, 3790, 4349, 4860, 5058 |
| BseRI | GAGGAG | 6 cut(s) | 659, 1258, 2991, 3184, 4150, 4462 |
| BseSI | GKGCMC | 1 cut(s) | 3657 |
| BseX3I | CGGCCG | 1 cut(s) | 3090 |
| BseYI | CCCAGC | 2 cut(s) | 3609, 4830 |
| BsgI | GTGCAG | 1 cut(s) | 3008 |
| Bsh1236I | CGCG | 3 cut(s) | 1456, 2635, 4166 |
| Bsh1285I | CGRYCG | 1 cut(s) | 3093 |
| BshNI | GGYRCC | 4 cut(s) | 1472, 2319, 3928, 4081 |
| BshVI | ATCGAT | 1 cut(s) | 462 |
| BsiEI | CGRYCG | 1 cut(s) | 3093 |
| BsiHKAI | GWGCWC | 3 cut(s) | 2775, 3657, 5398 |
| BsiHKCI | CYCGRG | 2 cut(s) | 2022, 4532 |
| BsiSI | CCGG | 3 cut(s) | 1145, 4393, 5088 |
| BslFI | GGGAC | 4 cut(s) | 2816, 3686, 4695, 5038 |
| BsmBI | CGTCTC | 3 cut(s) | 2694, 4517, 5295 |
| BsmFI | GGGAC | 4 cut(s) | 2816, 3686, 4695, 5038 |
| BsmI | GAATGC | 5 cut(s) | 445, 1681, 3678, 3824, 4484 |
| Bso31I | GGTCTC | 2 cut(s) | 1501, 4969 |
| BsoBI | CYCGRG | 2 cut(s) | 2022, 4532 |
| Bsp1286I | GDGCHC | 5 cut(s) | 2775, 3240, 3657, 5095, 5398 |
| Bsp1407I | TGTACA | 1 cut(s) | 5386 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 2655, 5202 |
| Bsp19I | CCATGG | 3 cut(s) | 2878, 3281, 5466 |
| BspACI | CCGC | 9 cut(s) | 32, 56, 369, 1456, 2117, 2439, 3189, 4543, 5272 |
| BspDI | ATCGAT | 1 cut(s) | 462 |
| BspFNI | CGCG | 3 cut(s) | 1456, 2635, 4166 |
| BspHI | TCATGA | 6 cut(s) | 813, 1516, 1951, 3448, 4216, 5095 |
| BspMAI | CTGCAG | 1 cut(s) | 1777 |
| BspMI | ACCTGC | 2 cut(s) | 2260, 5371 |
| BspOI | GCTAGC | 1 cut(s) | 2214 |
| BspT107I | GGYRCC | 4 cut(s) | 1472, 2319, 3928, 4081 |
| BspTI | CTTAAG | 2 cut(s) | 4171, 5216 |
| BspTNI | GGTCTC | 2 cut(s) | 1501, 4969 |
| BsrDI | GCAATG | 4 cut(s) | 18, 1245, 2023, 5141 |
| BsrGI | TGTACA | 1 cut(s) | 5386 |
| BsrI | ACTGG | 6 cut(s) | 1216, 1947, 3790, 4349, 4860, 5058 |
| BssNAI | GTATAC | 1 cut(s) | 860 |
| BssNI | GRCGYC | 3 cut(s) | 3103, 4262, 4526 |
| BssSI | CACGAG | 1 cut(s) | 378 |
| BssT1I | CCWWGG | 9 cut(s) | 266, 685, 1270, 2372, 2878, 3281, 4435, 5155, 5466 |
| Bst1107I | GTATAC | 1 cut(s) | 860 |
| Bst2BI | CACGAG | 1 cut(s) | 378 |
| Bst2UI | CCWGG | 7 cut(s) | 865, 2154, 2778, 3039, 3073, 3107, 4777 |
| Bst6I | CTCTTC | 6 cut(s) | 56, 1173, 1675, 1981, 2607, 4480 |
| BstACI | GRCGYC | 3 cut(s) | 3103, 4262, 4526 |
| BstAFI | CTTAAG | 2 cut(s) | 4171, 5216 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 452, 1313, 3068, 5212 |
| BstAUI | TGTACA | 1 cut(s) | 5386 |
| BstC8I | GCNNGC | 9 cut(s) | 361, 1825, 2212, 3010, 3416, 3915, 4028, 4812, 5213 |
| BstDSI | CCRYGG | 5 cut(s) | 11, 2878, 3281, 3396, 5466 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 4089 |
| BstF5I | GGATG | 7 cut(s) | 757, 904, 1189, 1814, 1970, 3977, 4240 |
| BstFNI | CGCG | 3 cut(s) | 1456, 2635, 4166 |
| BstH2I | RGCGCY | 1 cut(s) | 4652 |
| BstHHI | GCGC | 1 cut(s) | 4651 |
| BstMCI | CGRYCG | 1 cut(s) | 3093 |
| BstNI | CCWGG | 7 cut(s) | 865, 2154, 2778, 3039, 3073, 3107, 4777 |
| BstNSI | RCATGY | 6 cut(s) | 1370, 2344, 4808, 4814, 5215, 5226 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 5174 |
| BstSCI | CCNGG | 9 cut(s) | 863, 2152, 2776, 3037, 3071, 3105, 4392, 4775, 5087 |
| BstSFI | CTRYAG | 4 cut(s) | 1773, 4275, 5028, 5355 |
| BstSLI | GKGCMC | 1 cut(s) | 3657 |
| BstUI | CGCG | 3 cut(s) | 1456, 2635, 4166 |
| BstV2I | GAAGAC | 6 cut(s) | 278, 980, 1152, 1646, 4191, 5174 |
| BstX2I | RGATCY | 3 cut(s) | 245, 3376, 4911 |
| BstYI | RGATCY | 3 cut(s) | 245, 3376, 4911 |
| BstZ17I | GTATAC | 1 cut(s) | 860 |
| BstZI | CGGCCG | 1 cut(s) | 3090 |
| Bsu15I | ATCGAT | 1 cut(s) | 462 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2801 |
| BsuI | GTATCC | 3 cut(s) | 1399, 4304, 4390 |
| BsuTUI | ATCGAT | 1 cut(s) | 462 |
| BtgI | CCRYGG | 5 cut(s) | 11, 2878, 3281, 3396, 5466 |
| BtrI | CACGTC | 1 cut(s) | 526 |
| BtsCI | GGATG | 7 cut(s) | 757, 904, 1189, 1814, 1970, 3977, 4240 |
| BtsI | GCAGTG | 4 cut(s) | 1590, 1789, 2851, 3580 |
| BtsIMutI | CAGTG | 6 cut(s) | 1590, 1789, 2203, 2851, 3580, 5051 |
| BveI | ACCTGC | 2 cut(s) | 2260, 5371 |
| Cac8I | GCNNGC | 9 cut(s) | 361, 1825, 2212, 3010, 3416, 3915, 4028, 4812, 5213 |
| CaiI | CAGNNNCTG | 6 cut(s) | 1262, 2929, 3068, 3078, 3938, 5261 |
| CciI | TCATGA | 6 cut(s) | 813, 1516, 1951, 3448, 4216, 5095 |
| CfoI | GCGC | 1 cut(s) | 4651 |
| Cfr13I | GGNCC | 7 cut(s) | 590, 1213, 2446, 4390, 4432, 5483, 5506 |
| ClaI | ATCGAT | 1 cut(s) | 462 |
| CseI | GACGC | 5 cut(s) | 444, 3111, 4155, 4172, 4534 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1259, 1294, 3403, 3438 |
| DraI | TTTAAA | 4 cut(s) | 744, 849, 4378, 4905 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 3853 |
| DriI | GACNNNNNGTC | 1 cut(s) | 4192 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 3853 |
| EaeI | YGGCCR | 4 cut(s) | 1099, 3090, 3603, 4255 |
| EagI | CGGCCG | 1 cut(s) | 3090 |
| Eam1104I | CTCTTC | 6 cut(s) | 56, 1173, 1675, 1981, 2607, 4480 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 4192 |
| EarI | CTCTTC | 6 cut(s) | 56, 1173, 1675, 1981, 2607, 4480 |
| EciI | GGCGGA | 2 cut(s) | 358, 2106 |
| Ecl136II | GAGCTC | 1 cut(s) | 2773 |
| EclXI | CGGCCG | 1 cut(s) | 3090 |
| Eco130I | CCWWGG | 9 cut(s) | 266, 685, 1270, 2372, 2878, 3281, 4435, 5155, 5466 |
| Eco24I | GRGCYC | 3 cut(s) | 2775, 3240, 5095 |
| Eco31I | GGTCTC | 2 cut(s) | 1501, 4969 |
| Eco32I | GATATC | 2 cut(s) | 118, 3712 |
| Eco47I | GGWCC | 4 cut(s) | 590, 1213, 4432, 5506 |
| Eco47III | AGCGCT | 1 cut(s) | 4650 |
| Eco52I | CGGCCG | 1 cut(s) | 3090 |
| Eco53kI | GAGCTC | 1 cut(s) | 2773 |
| Eco57I | CTGAAG | 4 cut(s) | 603, 2179, 2747, 5352 |
| Eco81I | CCTNAGG | 1 cut(s) | 2801 |
| Eco88I | CYCGRG | 2 cut(s) | 2022, 4532 |
| EcoICRI | GAGCTC | 1 cut(s) | 2773 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 4089 |
| EcoO109I | RGGNCCY | 3 cut(s) | 2446, 4432, 5483 |
| EcoRI | GAATTC | 1 cut(s) | 2276 |
| EcoRII | CCWGG | 7 cut(s) | 863, 2152, 2776, 3037, 3071, 3105, 4775 |
| EcoRV | GATATC | 2 cut(s) | 118, 3712 |
| EcoT14I | CCWWGG | 9 cut(s) | 266, 685, 1270, 2372, 2878, 3281, 4435, 5155, 5466 |
| EcoT22I | ATGCAT | 3 cut(s) | 1683, 3826, 4486 |
| EcoT38I | GRGCYC | 3 cut(s) | 2775, 3240, 5095 |
| ErhI | CCWWGG | 9 cut(s) | 266, 685, 1270, 2372, 2878, 3281, 4435, 5155, 5466 |
| Esp3I | CGTCTC | 3 cut(s) | 2694, 4517, 5295 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 4635, 4667, 4638, 4670, 5199, 5231 |
| FaqI | GGGAC | 4 cut(s) | 2816, 3686, 4695, 5038 |
| FauI | CCCGC | 1 cut(s) | 2432 |
| FauNDI | CATATG | 1 cut(s) | 4679 |
| FbaI | TGATCA | 3 cut(s) | 127, 810, 2920 |
| FblI | GTMKAC | 3 cut(s) | 859, 944, 2914 |
| FokI | GGATG | 7 cut(s) | 764, 911, 1196, 1801, 1957, 3964, 4247 |
| FriOI | GRGCYC | 3 cut(s) | 2775, 3240, 5095 |
| GlaI | GCGC | 1 cut(s) | 4650 |
| GsaI | CCCAGC | 2 cut(s) | 3613, 4834 |
| GsuI | CTGGAG | 4 cut(s) | 326, 1059, 1419, 3160 |
| HaeII | RGCGCY | 1 cut(s) | 4652 |
| HapII | CCGG | 3 cut(s) | 1145, 4393, 5088 |
| HgaI | GACGC | 5 cut(s) | 444, 3111, 4155, 4172, 4534 |
| HhaI | GCGC | 1 cut(s) | 4651 |
| Hin1I | GRCGYC | 3 cut(s) | 3103, 4262, 4526 |
| Hin6I | GCGC | 1 cut(s) | 4649 |
| HinP1I | GCGC | 1 cut(s) | 4649 |
| HincII | GTYRAC | 4 cut(s) | 190, 298, 1588, 2701 |
| HindII | GTYRAC | 4 cut(s) | 190, 298, 1588, 2701 |
| HindIII | AAGCTT | 2 cut(s) | 39, 3416 |
| HpaII | CCGG | 3 cut(s) | 1145, 4393, 5088 |
| Hpy99I | CGWCG | 3 cut(s) | 2099, 2102, 4105 |
| Hsp92I | GRCGYC | 3 cut(s) | 3103, 4262, 4526 |
| HspAI | GCGC | 1 cut(s) | 4649 |
| KpnI | GGTACC | 2 cut(s) | 3932, 4085 |
| Ksp22I | TGATCA | 3 cut(s) | 127, 810, 2920 |
| MfeI | CAATTG | 4 cut(s) | 240, 965, 1435, 2334 |
| MflI | RGATCY | 3 cut(s) | 245, 3376, 4911 |
| MhlI | GDGCHC | 5 cut(s) | 2775, 3240, 3657, 5095, 5398 |
| MlsI | TGGCCA | 3 cut(s) | 1101, 3605, 4257 |
| MluI | ACGCGT | 1 cut(s) | 4164 |
| MluNI | TGGCCA | 3 cut(s) | 1101, 3605, 4257 |
| MmeI | TCCRAC | 6 cut(s) | 3640, 3869, 4473, 4848, 5044, 5369 |
| Mox20I | TGGCCA | 3 cut(s) | 1101, 3605, 4257 |
| Mph1103I | ATGCAT | 3 cut(s) | 1683, 3826, 4486 |
| MroXI | GAANNNNTTC | 6 cut(s) | 977, 2418, 3495, 4116, 4227, 4650 |
| MscI | TGGCCA | 3 cut(s) | 1101, 3605, 4257 |
| MslI | CAYNNNNRTG | 4 cut(s) | 423, 474, 3447, 4809 |
| Msp20I | TGGCCA | 3 cut(s) | 1101, 3605, 4257 |
| MspA1I | CMGCKG | 4 cut(s) | 32, 2654, 3650, 5351 |
| MspCI | CTTAAG | 2 cut(s) | 4171, 5216 |
| MspI | CCGG | 3 cut(s) | 1145, 4393, 5088 |
| MspR9I | CCNGG | 9 cut(s) | 865, 2154, 2778, 3039, 3073, 3107, 4394, 4777, 5089 |
| MunI | CAATTG | 4 cut(s) | 240, 965, 1435, 2334 |
| Mva1269I | GAATGC | 5 cut(s) | 445, 1681, 3678, 3824, 4484 |
| MvaI | CCWGG | 7 cut(s) | 865, 2154, 2778, 3039, 3073, 3107, 4777 |
| MvnI | CGCG | 3 cut(s) | 1456, 2635, 4166 |
| NciI | CCSGG | 2 cut(s) | 4394, 5089 |
| NcoI | CCATGG | 3 cut(s) | 2878, 3281, 5466 |
| NdeI | CATATG | 1 cut(s) | 4679 |
| NheI | GCTAGC | 1 cut(s) | 2210 |
| NmeAIII | GCCGAG | 1 cut(s) | 3068 |
| NmuCI | GTSAC | 5 cut(s) | 802, 2224, 3575, 3888, 4968 |
| NsiI | ATGCAT | 3 cut(s) | 1683, 3826, 4486 |
| NspI | RCATGY | 6 cut(s) | 1370, 2344, 4808, 4814, 5215, 5226 |
| PaeI | GCATGC | 2 cut(s) | 4814, 5215 |
| PaeR7I | CTCGAG | 2 cut(s) | 2022, 4532 |
| PagI | TCATGA | 6 cut(s) | 813, 1516, 1951, 3448, 4216, 5095 |
| PaqCI | CACCTGC | 1 cut(s) | 5371 |
| PciI | ACATGT | 2 cut(s) | 1366, 4804 |
| PctI | GAATGC | 5 cut(s) | 445, 1681, 3678, 3824, 4484 |
| PdmI | GAANNNNTTC | 6 cut(s) | 977, 2418, 3495, 4116, 4227, 4650 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 1108, 1875, 2840 |
| PfoI | TCCNGGA | 1 cut(s) | 2152 |
| PpuMI | RGGWCCY | 1 cut(s) | 4432 |
| PscI | ACATGT | 2 cut(s) | 1366, 4804 |
| PshAI | GACNNNNGTC | 1 cut(s) | 5174 |
| PshBI | ATTAAT | 1 cut(s) | 693 |
| Psp124BI | GAGCTC | 1 cut(s) | 2775 |
| Psp1406I | AACGTT | 1 cut(s) | 186 |
| Psp5II | RGGWCCY | 1 cut(s) | 4432 |
| Psp6I | CCWGG | 7 cut(s) | 863, 2152, 2776, 3037, 3071, 3105, 4775 |
| PspFI | CCCAGC | 2 cut(s) | 3609, 4830 |
| PspGI | CCWGG | 7 cut(s) | 863, 2152, 2776, 3037, 3071, 3105, 4775 |
| PspPI | GGNCC | 7 cut(s) | 590, 1213, 2446, 4390, 4432, 5483, 5506 |
| PspPPI | RGGWCCY | 1 cut(s) | 4432 |
| PspXI | VCTCGAGB | 2 cut(s) | 2022, 4532 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2919, 2951 |
| PstI | CTGCAG | 1 cut(s) | 1777 |
| PstNI | CAGNNNCTG | 6 cut(s) | 1262, 2929, 3068, 3078, 3938, 5261 |
| PsuI | RGATCY | 3 cut(s) | 245, 3376, 4911 |
| PvuII | CAGCTG | 3 cut(s) | 2654, 3650, 5351 |
| RseI | CAYNNNNRTG | 4 cut(s) | 423, 474, 3447, 4809 |
| SacI | GAGCTC | 1 cut(s) | 2775 |
| Sau96I | GGNCC | 7 cut(s) | 590, 1213, 2446, 4390, 4432, 5483, 5506 |
| ScrFI | CCNGG | 9 cut(s) | 865, 2154, 2778, 3039, 3073, 3107, 4394, 4777, 5089 |
| SduI | GDGCHC | 5 cut(s) | 2775, 3240, 3657, 5095, 5398 |
| SfcI | CTRYAG | 4 cut(s) | 1773, 4275, 5028, 5355 |
| Sfr274I | CTCGAG | 2 cut(s) | 2022, 4532 |
| SinI | GGWCC | 4 cut(s) | 590, 1213, 4432, 5506 |
| SlaI | CTCGAG | 2 cut(s) | 2022, 4532 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 423, 474, 3447, 4809 |
| SmlI | CTYRAG | 8 cut(s) | 2022, 2450, 3162, 4086, 4171, 4412, 4532, 5216 |
| SmoI | CTYRAG | 8 cut(s) | 2022, 2450, 3162, 4086, 4171, 4412, 4532, 5216 |
| SpeI | ACTAGT | 2 cut(s) | 515, 1649 |
| SphI | GCATGC | 2 cut(s) | 4814, 5215 |
| SsiI | CCGC | 9 cut(s) | 32, 56, 369, 1456, 2117, 2439, 3189, 4543, 5272 |
| SspI | AATATT | 3 cut(s) | 2293, 3758, 4038 |
| SstI | GAGCTC | 1 cut(s) | 2775 |
| StyD4I | CCNGG | 9 cut(s) | 863, 2152, 2776, 3037, 3071, 3105, 4392, 4775, 5087 |
| StyI | CCWWGG | 9 cut(s) | 266, 685, 1270, 2372, 2878, 3281, 4435, 5155, 5466 |
| TaqII | GACCGA | 1 cut(s) | 1483 |
| TatI | WGTACW | 1 cut(s) | 5386 |
| TauI | GCSGC | 1 cut(s) | 3192 |
| TscAI | CASTG | 6 cut(s) | 1597, 1789, 2203, 2851, 3580, 5058 |
| TseFI | GTSAC | 5 cut(s) | 802, 2224, 3575, 3888, 4968 |
| Tsp45I | GTSAC | 5 cut(s) | 802, 2224, 3575, 3888, 4968 |
| TspGWI | ACGGA | 6 cut(s) | 1049, 1146, 3385, 4055, 4609, 5319 |
| TspRI | CASTG | 6 cut(s) | 1597, 1789, 2203, 2851, 3580, 5058 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 1108, 1875, 2840 |
| Vha464I | CTTAAG | 2 cut(s) | 4171, 5216 |
| VneI | GTGCAC | 1 cut(s) | 3653 |
| VpaK11BI | GGWCC | 4 cut(s) | 590, 1213, 4432, 5506 |
| VspI | ATTAAT | 1 cut(s) | 693 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 4089 |
| XbaI | TCTAGA | 2 cut(s) | 47, 4355 |
| XceI | RCATGY | 6 cut(s) | 1370, 2344, 4808, 4814, 5215, 5226 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1259 |
| XhoI | CTCGAG | 2 cut(s) | 2022, 4532 |
| XmiI | GTMKAC | 3 cut(s) | 859, 944, 2914 |
| XmnI | GAANNNNTTC | 6 cut(s) | 977, 2418, 3495, 4116, 4227, 4650 |
| ZraI | GACGTC | 1 cut(s) | 4263 |
| Zsp2I | ATGCAT | 3 cut(s) | 1683, 3826, 4486 |