Autophagy-related protein C terminal domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G19190 AT3G19190 AT3G19190 |
| fragaria_vesca | FvH4_2g06220 |
| malus_domestica | MD05G1079500.v1.1 MD10G1093800.v1.1 |
| prunus_persica | Prupe.8G123400_v2.0.a1 Prupe.8G123400_v2.0.a1 |
| pyrus_communis | pycom05g07260 pycom10g07720 |
| rosa_chinensis | RchiOBHm_Chr6g0256971 |
| rosa_laevigata | RLG00000014666 |
| rosa_multiflora | Rmu_co8396705.1_g000001 Rmu_sc0000659.1_g000038 |
| rosa_roxburghii | Rroxscaffold_7G00208380 |
| rosa_rugosa | Rorug05G0576000 Rorug05G0576100 |
| rosa_samantha | Rh6AG094700 Rh6BG085900 Rh6CG082000 Rh6DG077700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1585 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 113 |
| AatII | GACGTC | 1 cut(s) | 808 |
| Acc36I | ACCTGC | 2 cut(s) | 1585, 2749 |
| Acc65I | GGTACC | 2 cut(s) | 1213, 1673 |
| AccB1I | GGYRCC | 7 cut(s) | 146, 1213, 1673, 3041, 4409, 5387, 5602 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 972, 1121, 4709 |
| AccI | GTMKAC | 2 cut(s) | 117, 2737 |
| AccII | CGCG | 2 cut(s) | 14, 40 |
| AciI | CCGC | 7 cut(s) | 23, 40, 55, 1143, 4618, 4865, 5187 |
| AcoI | YGGCCR | 1 cut(s) | 3299 |
| AcsI | RAATTY | 9 cut(s) | 334, 591, 2267, 2618, 3727, 3908, 4422, 4682, 5661 |
| AcuI | CTGAAG | 6 cut(s) | 645, 1839, 1860, 4977, 4992, 5842 |
| AcvI | CACGTG | 1 cut(s) | 1196 |
| AcyI | GRCGYC | 4 cut(s) | 805, 1112, 3042, 5726 |
| AdeI | CACNNNGTG | 3 cut(s) | 3068, 3386, 4673 |
| AflII | CTTAAG | 1 cut(s) | 4547 |
| AflIII | ACRYGT | 9 cut(s) | 1195, 1355, 2363, 2728, 3128, 3503, 3990, 4537, 5248 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 3475, 3814 |
| AhlI | ACTAGT | 1 cut(s) | 3095 |
| AjiI | CACGTC | 3 cut(s) | 2970, 3993, 4538 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 17, 49 |
| Alw21I | GWGCWC | 4 cut(s) | 2714, 4991, 5427, 5848 |
| Alw26I | GTCTC | 5 cut(s) | 2588, 2924, 3494, 3975, 5687 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 5795, 5819 |
| Ama87I | CYCGRG | 1 cut(s) | 386 |
| AoxI | GGCC | 8 cut(s) | 45, 88, 1937, 2055, 2073, 3299, 5126, 5670 |
| ApoI | RAATTY | 9 cut(s) | 334, 591, 2267, 2618, 3727, 3908, 4422, 4682, 5661 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 119, 151, 1271, 1303 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 723, 1824, 2119, 4485, 5491 |
| Asp718I | GGTACC | 2 cut(s) | 1213, 1673 |
| AspLEI | GCGC | 1 cut(s) | 3044 |
| AspS9I | GGNCC | 9 cut(s) | 45, 88, 1279, 1937, 2315, 2555, 3477, 4129, 5912 |
| AsuC2I | CCSGG | 2 cut(s) | 387, 388 |
| AsuII | TTCGAA | 2 cut(s) | 589, 3020 |
| AsuNHI | GCTAGC | 1 cut(s) | 313 |
| AvaI | CYCGRG | 1 cut(s) | 386 |
| AvaII | GGWCC | 6 cut(s) | 1279, 2315, 2555, 3477, 4129, 5912 |
| AxyI | CCTNAGG | 1 cut(s) | 3642 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1368, 1401 |
| BamHI | GGATCC | 1 cut(s) | 3220 |
| BanI | GGYRCC | 7 cut(s) | 146, 1213, 1673, 3041, 4409, 5387, 5602 |
| BanII | GRGCYC | 3 cut(s) | 2714, 4991, 5539 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 4630, 4662 |
| BauI | CACGAG | 2 cut(s) | 2636, 3384 |
| BbrPI | CACGTG | 1 cut(s) | 1196 |
| BbsI | GAAGAC | 7 cut(s) | 1593, 2136, 3474, 3746, 4998, 5322, 5348 |
| Bbv12I | GWGCWC | 4 cut(s) | 2714, 4991, 5427, 5848 |
| BbvCI | CCTCAGC | 1 cut(s) | 5919 |
| BceAI | ACGGC | 3 cut(s) | 32, 160, 5243 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 3165, 3199 |
| BciVI | GTATCC | 2 cut(s) | 1396, 4732 |
| BclI | TGATCA | 3 cut(s) | 3106, 3123, 4999 |
| BcnI | CCSGG | 2 cut(s) | 387, 388 |
| BcoDI | GTCTC | 5 cut(s) | 2588, 2924, 3494, 3975, 5687 |
| BcuI | ACTAGT | 1 cut(s) | 3095 |
| BfmI | CTRYAG | 8 cut(s) | 345, 939, 3225, 5149, 5237, 5428, 5796, 5805 |
| BfoI | RGCGCY | 1 cut(s) | 3045 |
| BfrI | CTTAAG | 1 cut(s) | 4547 |
| BfuAI | ACCTGC | 2 cut(s) | 1585, 2749 |
| BfuI | GTATCC | 2 cut(s) | 1396, 4732 |
| BglII | AGATCT | 3 cut(s) | 2441, 2665, 3607 |
| BlpI | GCTNAGC | 1 cut(s) | 158 |
| BmcAI | AGTACT | 1 cut(s) | 714 |
| Bme18I | GGWCC | 6 cut(s) | 1279, 2315, 2555, 3477, 4129, 5912 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 3475, 3814 |
| BmeT110I | CYCGRG | 1 cut(s) | 386 |
| BmgBI | CACGTC | 3 cut(s) | 2970, 3993, 4538 |
| BmgT120I | GGNCC | 9 cut(s) | 45, 88, 1279, 1937, 2315, 2555, 3477, 4129, 5912 |
| BmrI | ACTGGG | 5 cut(s) | 1312, 1944, 4348, 4697, 5151 |
| BmtI | GCTAGC | 1 cut(s) | 317 |
| BmuI | ACTGGG | 5 cut(s) | 1312, 1944, 4348, 4697, 5151 |
| BoxI | GACNNNNGTC | 2 cut(s) | 2313, 5151 |
| BpiI | GAAGAC | 7 cut(s) | 1593, 2136, 3474, 3746, 4998, 5322, 5348 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 4003, 4035 |
| BpmI | CTGGAG | 5 cut(s) | 324, 795, 3890, 4679, 5796 |
| Bpu10I | CCTNAGC | 2 cut(s) | 5877, 5919 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 158 |
| Bpu14I | TTCGAA | 2 cut(s) | 589, 3020 |
| BpuEI | CTTGAG | 3 cut(s) | 323, 1642, 2654 |
| BpuMI | CCSGG | 2 cut(s) | 387, 388 |
| Bsa29I | ATCGAT | 2 cut(s) | 111, 3185 |
| BsaAI | YACGTR | 3 cut(s) | 502, 1196, 4154 |
| BsaBI | GATNNNNATC | 2 cut(s) | 633, 4071 |
| BsaHI | GRCGYC | 4 cut(s) | 805, 1112, 3042, 5726 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 17, 47, 4527, 4557 |
| Bse118I | RCCGGY | 1 cut(s) | 5390 |
| Bse21I | CCTNAGG | 1 cut(s) | 3642 |
| Bse3DI | GCAATG | 5 cut(s) | 462, 1249, 1862, 4519, 5079 |
| Bse8I | GATNNNNATC | 2 cut(s) | 633, 4071 |
| BseCI | ATCGAT | 2 cut(s) | 111, 3185 |
| BseJI | GATNNNNATC | 2 cut(s) | 633, 4071 |
| BseMI | GCAATG | 5 cut(s) | 462, 1249, 1862, 4519, 5079 |
| BseRI | GAGGAG | 4 cut(s) | 2230, 3177, 3943, 5102 |
| BseYI | CCCAGC | 5 cut(s) | 85, 1463, 5274, 5531, 5759 |
| BsgI | GTGCAG | 4 cut(s) | 225, 2457, 3687, 5415 |
| Bsh1236I | CGCG | 2 cut(s) | 14, 40 |
| BshFI | GGCC | 8 cut(s) | 47, 90, 1939, 2057, 2075, 3301, 5128, 5672 |
| BshNI | GGYRCC | 7 cut(s) | 146, 1213, 1673, 3041, 4409, 5387, 5602 |
| BshVI | ATCGAT | 2 cut(s) | 111, 3185 |
| BsiHKAI | GWGCWC | 4 cut(s) | 2714, 4991, 5427, 5848 |
| BsiHKCI | CYCGRG | 1 cut(s) | 386 |
| BsiSI | CCGG | 3 cut(s) | 387, 3302, 5391 |
| BslFI | GGGAC | 8 cut(s) | 816, 2921, 2980, 3766, 5139, 5201, 5777, 5898 |
| BsmAI | GTCTC | 5 cut(s) | 2588, 2924, 3494, 3975, 5687 |
| BsmFI | GGGAC | 8 cut(s) | 816, 2921, 2980, 3766, 5139, 5201, 5777, 5898 |
| BsmI | GAATGC | 7 cut(s) | 1298, 1574, 4369, 4578, 4916, 5463, 5577 |
| BsnI | GGCC | 8 cut(s) | 47, 90, 1939, 2057, 2075, 3301, 5128, 5672 |
| BsoBI | CYCGRG | 1 cut(s) | 386 |
| Bsp119I | TTCGAA | 2 cut(s) | 589, 3020 |
| Bsp1286I | GDGCHC | 5 cut(s) | 2714, 4991, 5427, 5539, 5848 |
| Bsp1407I | TGTACA | 3 cut(s) | 323, 3208, 5836 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 158 |
| Bsp19I | CCATGG | 3 cut(s) | 2089, 2311, 5924 |
| Bsp68I | TCGCGA | 1 cut(s) | 14 |
| BspACI | CCGC | 7 cut(s) | 23, 40, 55, 1143, 4618, 4865, 5187 |
| BspANI | GGCC | 8 cut(s) | 47, 90, 1939, 2057, 2075, 3301, 5128, 5672 |
| BspDI | ATCGAT | 2 cut(s) | 111, 3185 |
| BspFNI | CGCG | 2 cut(s) | 14, 40 |
| BspHI | TCATGA | 2 cut(s) | 831, 5539 |
| BspMAI | CTGCAG | 1 cut(s) | 5800 |
| BspMI | ACCTGC | 2 cut(s) | 1585, 2749 |
| BspOI | GCTAGC | 1 cut(s) | 317 |
| BspQI | GCTCTTC | 3 cut(s) | 2110, 4996, 5853 |
| BspT104I | TTCGAA | 2 cut(s) | 589, 3020 |
| BspT107I | GGYRCC | 7 cut(s) | 146, 1213, 1673, 3041, 4409, 5387, 5602 |
| BspTI | CTTAAG | 1 cut(s) | 4547 |
| BsrDI | GCAATG | 5 cut(s) | 462, 1249, 1862, 4519, 5079 |
| BsrFI | RCCGGY | 1 cut(s) | 5390 |
| BsrGI | TGTACA | 3 cut(s) | 323, 3208, 5836 |
| BssAI | RCCGGY | 1 cut(s) | 5390 |
| BssNI | GRCGYC | 4 cut(s) | 805, 1112, 3042, 5726 |
| BssSI | CACGAG | 2 cut(s) | 2636, 3384 |
| Bst2BI | CACGAG | 2 cut(s) | 2636, 3384 |
| Bst6I | CTCTTC | 4 cut(s) | 2110, 4099, 4996, 5853 |
| BstACI | GRCGYC | 4 cut(s) | 805, 1112, 3042, 5726 |
| BstAFI | CTTAAG | 1 cut(s) | 4547 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 5075, 5795 |
| BstAUI | TGTACA | 3 cut(s) | 323, 3208, 5836 |
| BstBAI | YACGTR | 3 cut(s) | 502, 1196, 4154 |
| BstBI | TTCGAA | 2 cut(s) | 589, 3020 |
| BstC8I | GCNNGC | 8 cut(s) | 315, 1776, 3060, 4325, 4578, 4582, 4952, 5076 |
| BstDSI | CCRYGG | 5 cut(s) | 2089, 2311, 3564, 5219, 5924 |
| BstEII | GGTNACC | 1 cut(s) | 359 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 4136 |
| BstFNI | CGCG | 2 cut(s) | 14, 40 |
| BstH2I | RGCGCY | 1 cut(s) | 3045 |
| BstHHI | GCGC | 1 cut(s) | 3044 |
| BstMAI | GTCTC | 5 cut(s) | 2588, 2924, 3494, 3975, 5687 |
| BstNSI | RCATGY | 7 cut(s) | 1359, 1415, 2732, 3132, 3507, 3804, 5078 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 2313, 5151 |
| BstPI | GGTNACC | 1 cut(s) | 359 |
| BstSFI | CTRYAG | 8 cut(s) | 345, 939, 3225, 5149, 5237, 5428, 5796, 5805 |
| BstUI | CGCG | 2 cut(s) | 14, 40 |
| BstV2I | GAAGAC | 7 cut(s) | 1593, 2136, 3474, 3746, 4998, 5322, 5348 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 200, 2623 |
| Bsu15I | ATCGAT | 2 cut(s) | 111, 3185 |
| Bsu36I | CCTNAGG | 1 cut(s) | 3642 |
| BsuI | GTATCC | 2 cut(s) | 1396, 4732 |
| BsuRI | GGCC | 8 cut(s) | 47, 90, 1939, 2057, 2075, 3301, 5128, 5672 |
| BsuTUI | ATCGAT | 2 cut(s) | 111, 3185 |
| BtgI | CCRYGG | 5 cut(s) | 2089, 2311, 3564, 5219, 5924 |
| BtgZI | GCGATG | 2 cut(s) | 44, 3171 |
| BtrI | CACGTC | 3 cut(s) | 2970, 3993, 4538 |
| BtsI | GCAGTG | 1 cut(s) | 3675 |
| BtsIMutI | CAGTG | 8 cut(s) | 1375, 1952, 3670, 3675, 4209, 4952, 5629, 5692 |
| BtuMI | TCGCGA | 1 cut(s) | 14 |
| BveI | ACCTGC | 2 cut(s) | 1585, 2749 |
| Cac8I | GCNNGC | 8 cut(s) | 315, 1776, 3060, 4325, 4578, 4582, 4952, 5076 |
| CaiI | CAGNNNCTG | 2 cut(s) | 5795, 5819 |
| CciI | TCATGA | 2 cut(s) | 831, 5539 |
| CfoI | GCGC | 1 cut(s) | 3044 |
| Cfr10I | RCCGGY | 1 cut(s) | 5390 |
| Cfr13I | GGNCC | 9 cut(s) | 45, 88, 1279, 1937, 2315, 2555, 3477, 4129, 5912 |
| Cfr9I | CCCGGG | 1 cut(s) | 386 |
| ClaI | ATCGAT | 2 cut(s) | 111, 3185 |
| CseI | GACGC | 2 cut(s) | 1120, 5734 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 3256, 3291 |
| DinI | GGCGCC | 1 cut(s) | 3043 |
| DraIII | CACNNNGTG | 3 cut(s) | 3068, 3386, 4673 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 113 |
| DriI | GACNNNNNGTC | 2 cut(s) | 3475, 3814 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 113 |
| EaeI | YGGCCR | 1 cut(s) | 3299 |
| Eam1104I | CTCTTC | 4 cut(s) | 2110, 4099, 4996, 5853 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 3475, 3814 |
| EarI | CTCTTC | 4 cut(s) | 2110, 4099, 4996, 5853 |
| EciI | GGCGGA | 1 cut(s) | 38 |
| Ecl136II | GAGCTC | 2 cut(s) | 2712, 4989 |
| Eco147I | AGGCCT | 2 cut(s) | 2075, 5672 |
| Eco24I | GRGCYC | 3 cut(s) | 2714, 4991, 5539 |
| Eco32I | GATATC | 2 cut(s) | 1579, 4047 |
| Eco47I | GGWCC | 6 cut(s) | 1279, 2315, 2555, 3477, 4129, 5912 |
| Eco53kI | GAGCTC | 2 cut(s) | 2712, 4989 |
| Eco57I | CTGAAG | 6 cut(s) | 645, 1839, 1860, 4977, 4992, 5842 |
| Eco72I | CACGTG | 1 cut(s) | 1196 |
| Eco81I | CCTNAGG | 1 cut(s) | 3642 |
| Eco88I | CYCGRG | 1 cut(s) | 386 |
| Eco91I | GGTNACC | 1 cut(s) | 359 |
| EcoICRI | GAGCTC | 2 cut(s) | 2712, 4989 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 4136 |
| EcoO109I | RGGNCCY | 2 cut(s) | 4129, 5912 |
| EcoO65I | GGTNACC | 1 cut(s) | 359 |
| EcoRI | GAATTC | 2 cut(s) | 334, 5661 |
| EcoRV | GATATC | 2 cut(s) | 1579, 4047 |
| EcoT22I | ATGCAT | 2 cut(s) | 3178, 4060 |
| EcoT38I | GRGCYC | 3 cut(s) | 2714, 4991, 5539 |
| EgeI | GGCGCC | 1 cut(s) | 3043 |
| EheI | GGCGCC | 1 cut(s) | 3043 |
| FaqI | GGGAC | 8 cut(s) | 816, 2921, 2980, 3766, 5139, 5201, 5777, 5898 |
| FauI | CCCGC | 2 cut(s) | 48, 5180 |
| FauNDI | CATATG | 2 cut(s) | 1029, 1611 |
| FbaI | TGATCA | 3 cut(s) | 3106, 3123, 4999 |
| FblI | GTMKAC | 2 cut(s) | 117, 2737 |
| FriOI | GRGCYC | 3 cut(s) | 2714, 4991, 5539 |
| GlaI | GCGC | 1 cut(s) | 3043 |
| GsaI | CCCAGC | 5 cut(s) | 89, 1467, 5278, 5535, 5763 |
| GsuI | CTGGAG | 5 cut(s) | 324, 795, 3890, 4679, 5796 |
| HaeII | RGCGCY | 1 cut(s) | 3045 |
| HaeIII | GGCC | 8 cut(s) | 47, 90, 1939, 2057, 2075, 3301, 5128, 5672 |
| HapII | CCGG | 3 cut(s) | 387, 3302, 5391 |
| HgaI | GACGC | 2 cut(s) | 1120, 5734 |
| HhaI | GCGC | 1 cut(s) | 3044 |
| Hin1I | GRCGYC | 4 cut(s) | 805, 1112, 3042, 5726 |
| Hin6I | GCGC | 1 cut(s) | 3042 |
| HinP1I | GCGC | 1 cut(s) | 3042 |
| HincII | GTYRAC | 2 cut(s) | 118, 680 |
| HindII | GTYRAC | 2 cut(s) | 118, 680 |
| HindIII | AAGCTT | 4 cut(s) | 2233, 2999, 4484, 4727 |
| HpaII | CCGG | 3 cut(s) | 387, 3302, 5391 |
| Hpy99I | CGWCG | 3 cut(s) | 131, 146, 182 |
| Hsp92I | GRCGYC | 4 cut(s) | 805, 1112, 3042, 5726 |
| HspAI | GCGC | 1 cut(s) | 3042 |
| KasI | GGCGCC | 1 cut(s) | 3041 |
| KpnI | GGTACC | 2 cut(s) | 1217, 1677 |
| Ksp22I | TGATCA | 3 cut(s) | 3106, 3123, 4999 |
| LguI | GCTCTTC | 3 cut(s) | 2110, 4996, 5853 |
| MfeI | CAATTG | 4 cut(s) | 3270, 3879, 4530, 5472 |
| MhlI | GDGCHC | 5 cut(s) | 2714, 4991, 5427, 5539, 5848 |
| Mly113I | GGCGCC | 1 cut(s) | 3042 |
| MlyI | GAGTC | 7 cut(s) | 1148, 3464, 3977, 4085, 4109, 4920, 5900 |
| MmeI | TCCRAC | 2 cut(s) | 3871, 3998 |
| Mph1103I | ATGCAT | 2 cut(s) | 3178, 4060 |
| MroXI | GAANNNNTTC | 5 cut(s) | 723, 1824, 2119, 4485, 5491 |
| MslI | CAYNNNNRTG | 6 cut(s) | 450, 565, 1512, 2525, 3581, 3791 |
| MspA1I | CMGCKG | 6 cut(s) | 350, 1382, 1796, 4618, 5531, 5801 |
| MspCI | CTTAAG | 1 cut(s) | 4547 |
| MspI | CCGG | 3 cut(s) | 387, 3302, 5391 |
| MunI | CAATTG | 4 cut(s) | 3270, 3879, 4530, 5472 |
| Mva1269I | GAATGC | 7 cut(s) | 1298, 1574, 4369, 4578, 4916, 5463, 5577 |
| MvnI | CGCG | 2 cut(s) | 14, 40 |
| NarI | GGCGCC | 1 cut(s) | 3042 |
| NciI | CCSGG | 2 cut(s) | 387, 388 |
| NcoI | CCATGG | 3 cut(s) | 2089, 2311, 5924 |
| NdeI | CATATG | 2 cut(s) | 1029, 1611 |
| NheI | GCTAGC | 1 cut(s) | 313 |
| NmeAIII | GCCGAG | 4 cut(s) | 81, 1585, 1598, 2083 |
| NmuCI | GTSAC | 8 cut(s) | 1108, 1191, 1882, 2288, 2359, 2548, 3091, 4101 |
| NruI | TCGCGA | 1 cut(s) | 14 |
| NsiI | ATGCAT | 2 cut(s) | 3178, 4060 |
| NspI | RCATGY | 7 cut(s) | 1359, 1415, 2732, 3132, 3507, 3804, 5078 |
| NspV | TTCGAA | 2 cut(s) | 589, 3020 |
| PaeI | GCATGC | 1 cut(s) | 5078 |
| PagI | TCATGA | 2 cut(s) | 831, 5539 |
| PaqCI | CACCTGC | 1 cut(s) | 1585 |
| PceI | AGGCCT | 2 cut(s) | 2075, 5672 |
| PciI | ACATGT | 4 cut(s) | 1355, 2728, 3128, 3503 |
| PciSI | GCTCTTC | 3 cut(s) | 2110, 4996, 5853 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 26, 108, 123, 174 |
| PctI | GAATGC | 7 cut(s) | 1298, 1574, 4369, 4578, 4916, 5463, 5577 |
| PdmI | GAANNNNTTC | 5 cut(s) | 723, 1824, 2119, 4485, 5491 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 972, 1121, 4709 |
| PleI | GAGTC | 7 cut(s) | 1147, 3464, 3976, 4085, 4108, 4919, 5899 |
| PluTI | GGCGCC | 1 cut(s) | 3045 |
| PmaCI | CACGTG | 1 cut(s) | 1196 |
| PmlI | CACGTG | 1 cut(s) | 1196 |
| PpsI | GAGTC | 7 cut(s) | 1147, 3464, 3976, 4085, 4108, 4919, 5899 |
| Ppu21I | YACGTR | 3 cut(s) | 502, 1196, 4154 |
| PpuMI | RGGWCCY | 2 cut(s) | 4129, 5912 |
| PscI | ACATGT | 4 cut(s) | 1355, 2728, 3128, 3503 |
| PshAI | GACNNNNGTC | 2 cut(s) | 2313, 5151 |
| Psp124BI | GAGCTC | 2 cut(s) | 2714, 4991 |
| Psp5II | RGGWCCY | 2 cut(s) | 4129, 5912 |
| PspCI | CACGTG | 1 cut(s) | 1196 |
| PspEI | GGTNACC | 1 cut(s) | 359 |
| PspFI | CCCAGC | 5 cut(s) | 85, 1463, 5274, 5531, 5759 |
| PspPI | GGNCC | 9 cut(s) | 45, 88, 1279, 1937, 2315, 2555, 3477, 4129, 5912 |
| PspPPI | RGGWCCY | 2 cut(s) | 4129, 5912 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1891, 1923 |
| PstI | CTGCAG | 1 cut(s) | 5800 |
| PstNI | CAGNNNCTG | 2 cut(s) | 5795, 5819 |
| PvuII | CAGCTG | 5 cut(s) | 350, 1382, 1796, 5531, 5801 |
| RruI | TCGCGA | 1 cut(s) | 14 |
| RseI | CAYNNNNRTG | 6 cut(s) | 450, 565, 1512, 2525, 3581, 3791 |
| SacI | GAGCTC | 2 cut(s) | 2714, 4991 |
| SalI | GTCGAC | 1 cut(s) | 116 |
| SapI | GCTCTTC | 3 cut(s) | 2110, 4996, 5853 |
| Sau96I | GGNCC | 9 cut(s) | 45, 88, 1279, 1937, 2315, 2555, 3477, 4129, 5912 |
| ScaI | AGTACT | 1 cut(s) | 714 |
| SchI | GAGTC | 7 cut(s) | 1148, 3464, 3977, 4085, 4109, 4920, 5900 |
| SduI | GDGCHC | 5 cut(s) | 2714, 4991, 5427, 5539, 5848 |
| SfcI | CTRYAG | 8 cut(s) | 345, 939, 3225, 5149, 5237, 5428, 5796, 5805 |
| SfoI | GGCGCC | 1 cut(s) | 3043 |
| SfuI | TTCGAA | 2 cut(s) | 589, 3020 |
| SinI | GGWCC | 6 cut(s) | 1279, 2315, 2555, 3477, 4129, 5912 |
| SmaI | CCCGGG | 1 cut(s) | 388 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 450, 565, 1512, 2525, 3581, 3791 |
| SmlI | CTYRAG | 4 cut(s) | 302, 1657, 2669, 4547 |
| SmoI | CTYRAG | 4 cut(s) | 302, 1657, 2669, 4547 |
| SpeI | ACTAGT | 1 cut(s) | 3095 |
| SphI | GCATGC | 1 cut(s) | 5078 |
| SseBI | AGGCCT | 2 cut(s) | 2075, 5672 |
| SsiI | CCGC | 7 cut(s) | 23, 40, 55, 1143, 4618, 4865, 5187 |
| SspDI | GGCGCC | 1 cut(s) | 3041 |
| SspI | AATATT | 6 cut(s) | 2002, 2907, 3025, 5212, 5346, 5564 |
| SstI | GAGCTC | 2 cut(s) | 2714, 4991 |
| StuI | AGGCCT | 2 cut(s) | 2075, 5672 |
| TatI | WGTACW | 8 cut(s) | 323, 712, 1898, 3208, 4502, 4540, 5518, 5836 |
| TscAI | CASTG | 8 cut(s) | 1375, 1959, 3670, 3675, 4209, 4952, 5629, 5692 |
| TseFI | GTSAC | 8 cut(s) | 1108, 1191, 1882, 2288, 2359, 2548, 3091, 4101 |
| Tsp45I | GTSAC | 8 cut(s) | 1108, 1191, 1882, 2288, 2359, 2548, 3091, 4101 |
| TspGWI | ACGGA | 4 cut(s) | 525, 567, 2203, 3614 |
| TspMI | CCCGGG | 1 cut(s) | 386 |
| TspRI | CASTG | 8 cut(s) | 1375, 1959, 3670, 3675, 4209, 4952, 5629, 5692 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 972, 1121, 4709 |
| Vha464I | CTTAAG | 1 cut(s) | 4547 |
| VpaK11BI | GGWCC | 6 cut(s) | 1279, 2315, 2555, 3477, 4129, 5912 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 4136 |
| XapI | RAATTY | 9 cut(s) | 334, 591, 2267, 2618, 3727, 3908, 4422, 4682, 5661 |
| XbaI | TCTAGA | 1 cut(s) | 4601 |
| XceI | RCATGY | 7 cut(s) | 1359, 1415, 2732, 3132, 3507, 3804, 5078 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 469, 5371 |
| XmaI | CCCGGG | 1 cut(s) | 386 |
| XmiI | GTMKAC | 2 cut(s) | 117, 2737 |
| XmnI | GAANNNNTTC | 5 cut(s) | 723, 1824, 2119, 4485, 5491 |
| ZraI | GACGTC | 1 cut(s) | 806 |
| ZrmI | AGTACT | 1 cut(s) | 714 |
| Zsp2I | ATGCAT | 2 cut(s) | 3178, 4060 |