Rh6BG085900

Autophagy-related protein C terminal domain

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
Physical Location & Seq
Reverse (-)
13389603 .. 13399783
10181 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG085900.1

Sequence Viewer

Length: 5943 bp
ATGTGGAACATCGCGAAGTCGGCGGAGGCGATGTTCTCGCGGTGGGCCGTCAAGCGGGTCTGTAAGTTCGTGTTGAAGAAGAAGCTGGGCCAGTTCATTCTCGGCGACATCGATGTCGACCAGCTCGACGTTCAGTTCGCCGACGGCACCATTCAGCTCAGCGACCTCGCCCTCAACGTCGATTTTCTTAACCAGAAGATTGGTGCAGCAGCATCAATGATGATAAAAGAAGGATCTATTGGTTCACTATTAGTTAGGATGCCTTGGAAGGGTAACGGTTGTGAGGTTGAAGTGGATGAGCTTGAGCTTGTGCTAGCTCCATGTACAGAGAAGAATTCTCCAGCTACAGCTGAAAGCGGTAACCAGAACCAAGATAGTAGTAACCCCGGGAAGTTTGATGCTGATATGCCGGACAATGCCACAAAATCTGCTTTCAGGGATGTGCATGAAGGTGTTAAAACCATTGCAAAGATGGTAAAGTGGTTGCTTACCAGCTTCCACGTAAGGATAAAAAGGTTGATTGTTGCCTTTGATCCTTGTTTAGAGAAGAACGGAAAGACATCAGGATGTTGCTCAACCTTGGTTCTTCGAATTGCAGAAACAGAATGTGGAACAGGTGTTTCTGAAGATACTAATCAAAATGCTGATGCAAGAACTGAGAACTTTCTGGGGAATAGTCAACTAACCACCTTTGTCAAGTTTCAAGGAGCAGTACTTGAACTGCTTCAAATGGATGATGTTGATAATCAAAAATGTATTCCATGTGTGACAGAAAGAACATTTGGTGAACTTTTTTCAGGGGGACGTCCTCCAGGTGTTACCACTCCAATCATGATTGGGAAAAGAGGTGGATTTTCAGGGAACTTAAAATTAAGTATTCCTTGGAAGAATGGATCTCTAGACATAGGGAAAGTGGATGCAGATGCTTTTATTGAACCTGTAGAATTAAGATTTCAACCAAGCACCATCAAATGGCTTTTACTTGCTTGGGAAGTATGCAAAAGTATGGAGAGGGATCAGAGCAATCATATGCCAACTGATTCTATTTTCCTTGATTCAGCATCTCACTTTGCTTCACCAATATCTGCTTGTTCTGCAACAGATAAGGTGACGCCAGTTCGTGATAGTTTGCCCACCGAGTCCGCTTCTTTGACACTTCAAGAATCATTAACTGAGGGTCTGCTACCCGGGTCACGTGTTATATCAGATTGGGTACCATTTTATATGAATAATAATAGAAGCCATGGTATGGAAGAACTTGATTTTGGGGCAAGTGTGGACCAGTTTTTTGAATGCTTTGATGGAATGAGAAGTTCCCAGTCAGCATTAGGAAGTAGTGGAATGTGGAATTGGACATGTTCTGTTGTCAGTGCTATCACAGCTGTATCCAGCCTTGCTTCTGGATCTTTGCATGTTGCCCCTGAACAGCAGCCAGTTGAAACCAATCTTAAAGCGACTTTAGCTGGGATTTCTGTTGTATTTCCATTCCAAGATGAAAACCAGAATCATTTGTGTGATACAAAGGGTGATTTAGGTTCTAGTTCAGATGTTCTATACCTATGTGTAGAATGCCGAGATATCCTTCTTGTTACGCAGATGTCTTCTCGGCATATGAGGTTTGAAGGAACAATGGGCTATATTGAGGTTGCCAATTACTCAAGTCATAAAGACGGTACCTTGGAGTTGGGTTTGCTAGGGTGTAACAACAAGGTTAAAAGCCAAACTTCTTCAATTCAACATCTTCAAGCCGATGTTCAAAGTGTTCTTCCTTTGCATGCCTCATCTTATTATTCGGCTGAATCAAATGGTTTAGCTGCTGAAGGTTTTCCATTTGGATATAGGGATGATTTAGTCAGAATTACATTGCTTAAAACTTCAGGTGTCACTTATTGTCAATGTACCGTCAGTTCTAGTTCATCTGATGGGAGTTCAACTGGGCCTACATCATTTTCACTGAAATTGCCGCACTTTGTTTTCTGGGTGGACTTCTCTTTGCTAAATATTCTATTAGAACTGTTGAAGGAAATTGGAAAGACTGTTGAAGTGAATGACCAGGCCGAGTTTTCTTCGGAGGCCTCTAATAAGATCCATGGATCATCTCATAGGGATCTTAGAAGAGCTTCTAGTTGTGTTACAACCTTGTCTTCAACAGATAGTGTGCGAGGTGATATATTTATCCCTAATGCACGGATAATTCTTTGTTTACGTTCCAATGGTGGTGAAACTGTTAGAAGCTTCTCCTCCTGGGATCAATTTGTTGCTCTGGAATTTACTTCACCTTCGACTTGTGACAAAGGCATGATTCAAGACCATGGTCCTACCTTTGATGCAAGTTCAGAGAAAAGGTATTCTTCAACTGTCACACGTTCTTTACAGTTGAATGTTGGTGATCTTGATGTTTTCCTGGTCAGTCCTCGAAGTAAAGATAATGCAGAAATCAGATCTGGCAAGATGCAGAGGCTAACACTTACTGCACAAAAAGTAATGTCTGTCAGCAACAGAAAAGGCAGTCTTTCTGTCATTAGTATGCTTTGGCAAGAGGGTTATGTGACTGGTCCTTGGATAGCAAAGAAAGCTAAGTGCCTCGCTACTTTTGAGGAATCAAGGAACATTTCCAAATTTGTGGGAAAAGATCACGAGTTTGCTTCTGTATCTACTGTGAAAGATCTTAAGGATTTAAGCTCCCAGACACGACAAGAGATTATTTTGAGCTCTGCATTTTTCCTACATGTTTGTCTACCTGCTGTTACAATAAAGTTAGACAATCCTCAATATAAAGAGTTGTGTCATCTTTTGGATCAAGTGATGAATGACATATCTGGTGTGGATCTCGATTCTATCAATGATAAGGAAGAATCTTCCATGCCTCAGACATCTATCCTTGTGGACTGTGATTCTGTTGAAATATTGATTAACTTGGATGTGAAGGAGACTGTCCCAGGCTCAATGCAGAGTGAACTTCCTGGGACGTGGAATCGTCTAAGACTGAAAGTTCAGAAGCTTGAAATGCTATCTGTTTCGAATATTGGAGGTATTCCAGGTGCCACTTTTTTCTGGCTGGCACACGGTGAAGGCAAATTGTGGGGTTCTATCACTAGTATTCCTGATCAGGAGTTTCTTCTGATCACATGTAGCAACTCGACAATGAAACGTGGCGATGGAGGAGGTTCAAATGCATTATCATCGATATTTGCTGGTTCTGATATTGTACATCTGTGGGGTCCTACAGGTTTTCATGGTTCTACATCTATAACGGTCAGATGTGCCACAATTGTTGCTGTTGGGGGTCGCTTGGATTGGCCGGATGCACTATGCTCCTTTTTCATTTTTCCTTCTGAAATTGAACAAGCAGAGGACAAGTGTAATCAAAAGGACGATGCACCTCGTGGATCTTCTTTTGTGCTTAACTTGGTTGATATTGGATTAAGCTATGAACCTTACCAAAAGAATATGGTGGTCAGGAGTGAAGACTCAGGGTCCAGTTGTTCGTCTGTCAAAGAGACATGTGAAGAATATGTTTCTTGTCTTTTGGCTGCATCTTCCTTGAATCTTTCAACTTCAACCGTGGGAGATTCCACAGAAATGAATTACAAAATTAGAGTGCGAGATCTTGGGCTTCTTCTCCGTGTAATGTTAAAGCCTGAGGATATTGGTGGCACTTACAGTGCAGAGCATCTTCACAAGATTGGGTATGTTAAAGTTGCAAGGGAGGCACTCGTTGAAGCAAATTTGAGAACTAATTGTAAAAATGGTCTTCTCTGGGAGGTAGAATGTTCAAAGTCCCACATTTTTGTGGAAACATGCCATGACACAATGTCTAGTCTGATTCGTTTGGCTGCTCAAATCCAACAGCTATTTGCTCCTGACCTGGAGGAATCAATTGTGCATTTGCAGACAAGGTGGAATAAATTTCAGCAGGAACAAGAGAGGAGAGGTTTGGCTGATGAAATCAGGATATTCGATAGTGAGTCTCCAACTGCTCAATTACACACGTCTGGTCTAGTTAGAGAGAGAGAGCCTCAGGTGGTTGGGTTAATGGATGAGATATCAGAAGATGCATTTCGAGATAATAATCACACCTACCAATATGACTCTTCTGAGTCACAAATTGGTATATCATCTGATGAGGACCTTGGAGAGGCGTGTTACTCACGTATTGGAACTCCTGATATTTTCTTGCCTGGTACATCTTATGATGGGTCAGTGCCATTGGTTGAATCAGAAAGTTGTCAAACTTCATTCCTACAAGAAGGTAATGTTTTGGAGTTAATAGAAGGGTATTGTTTATCTGAGTTACGACGACCTCTCTCGGAATTGTCTGTTGGCAGGCAATCATCTCAGGAGATTGTGAAATCCCAGTCCAAGAATGCTAGATTTGGAGATGGGTCAAGAGAAAATCATGGATGGTATGGCACCTCCGTAAAAATTTTAGAAAATCATATTCCAGAAACGAGTGAAAGTAGTAAGGAACAATTTGTCGAAGACAAGCTTCCTTCTACTGGCAGTACAAATTGCAATGATCTAGGGAAAGCAATTGGACGTGTACTCCTTAAGAACATTGATGTTAGATGGAGAATGCTTGCTGGCTCTGACTGGCATGATTCTAGAGCAACTGGTCAGCGGTCGGGGGATTTTACTGGAAGGGATGCTGCCGTATGCCTGGAGTTCTCACTATGTGGGATGGAATTTCAATATGACGTTTTCCCAGTTGGTGGAATATGTGTATCCAAGCTCTCTCTTTCGGTTCAAGACTTTTATCTATATGATAAGAGCAAAGATGCTCCTTGGAAACTGGTGCTAGGACATTATCATTCAAAGGATCATCCTCGGAAATCATCTTCAAAAGGATTCAAGCTGGACTTAGAAGCGGTCAGACCAGATCCTCTGACACCTCTCGAAGAATATAGGTTGCGAGTCGCATTCCTTCCCATGTTGTTACATCTTCACCAGTGCCAGCTTGATTTTCTCATTGGCTTCTTTGGGGCAAAGAGCTCTTCAGTTGATCAGTCTTCAGGTTGTTATCAAGATCCGGATGGTTCAAAAGTGTTGCCAACAAAGAGTAATAATCTTGCAGGGCATGCCATTGCAGAGGAGGCATTTCTTCCTTACTTTCAGAAGTTCGATATATGGCCTATTCTTGTTAGGGTGGACTACAGTCCCAGTCGTGTCGATCTGGCAGCATTAAGAGGCGGGAAGTATGTAGAACTTGTAAATATTGTCCCATGGAAGGGGGTCGAGCTACAGCTTAAACGTGTTCATGCCGTTGGTATTTATGGCTGGGGTAGTGTATGTGAAACAATTATAGGGGAGTGGTTAGAAGACATCTCTCAAAATCAGATTCATAAAATATTGAAAGGTCTTCCTACCATTCGATCATTTGTTGCTGTTGGTGCCGGTGCAGCGAAGCTGGTTTCTTTGCCAGTTGAGCACTATAGGAAGGACAAGAGGGTGGTCAAGGGAATGCAAAGAGGTACAATTGCATTTCTTAGAAGTATTTCTCTAGAAGCTGTTGGGCTTGGAGTACATTTAGCAGCTGGGGCTCATGATATTTTACTCCAAGCTGAATATTTGCTTACAAGCATTCCTCCTTCTGTACCCTGGTCAACACCACATAGAGTAAAATCCAGTGCTAGATCCAATCAACCTAAAGATGCCCAACAAGGAATTCATCAGGCCTATGAAAGTCTCAGTGATGGCTTGGGGAAATCTGCTTCTGCCTTGGTTCGGACGCCCCTGAAAAAATATCAGCGTGGAGCTGGTGCTGGGTCAGCTCTGGCATCTGCTGTTCGGGCAGTCCCTGCAGCTGCTATAGCTCCAGCCTCTGCTTGTGCAAGTGCTGTACATTGTGCTCTTCTTGGCTTCAGAAATAGCCTTGATCCTGAGCGTAAGAAAGAGTCTATGGAGAAATATCTAGGTCCCCCTCAGCCATGGGAACAAAACTGA

Protein Analysis

1980

Amino Acids

217.28

Weight (kDa)

5.54

Isoelectric Point (pI)

44.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ATG2_CAD PF13329 17 - 1538 2.7e-50 Autophagy-related protein 2
ATG2_CAD PF13329 1548 - 1970 1.6e-128 Autophagy-related protein 2
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 113
AatII GACGTC 1 cut(s) 808
Acc36I ACCTGC 1 cut(s) 2749
Acc65I GGTACC 2 cut(s) 1213, 1673
AccB1I GGYRCC 6 cut(s) 146, 1213, 1673, 3041, 4412, 5390
AccB7I CCANNNNNTGG 3 cut(s) 972, 1249, 4712
AccI GTMKAC 2 cut(s) 117, 2737
AccII CGCG 2 cut(s) 14, 40
AccIII TCCGGA 1 cut(s) 5029
AciI CCGC 9 cut(s) 23, 40, 55, 357, 1143, 1964, 4621, 4868, 5190
AcoI YGGCCR 1 cut(s) 3299
AcsI RAATTY 8 cut(s) 334, 2267, 2618, 3727, 3908, 4425, 4685, 5664
AcuI CTGAAG 6 cut(s) 645, 1839, 1860, 4980, 4995, 5845
AcvI CACGTG 1 cut(s) 1196
AcyI GRCGYC 3 cut(s) 805, 1112, 5729
AdeI CACNNNGTG 3 cut(s) 3068, 3386, 4676
AflII CTTAAG 2 cut(s) 2669, 4550
AflIII ACRYGT 9 cut(s) 1195, 1355, 2363, 2728, 3128, 3503, 3990, 4540, 5251
AhdI GACNNNNNGTC 2 cut(s) 3475, 3814
AhlI ACTAGT 1 cut(s) 3095
AjiI CACGTC 3 cut(s) 2970, 3993, 4541
AloI GAACNNNNNNTCC 2 cut(s) 17, 49
Alw21I GWGCWC 4 cut(s) 2714, 4994, 5430, 5851
Alw26I GTCTC 4 cut(s) 2924, 3494, 3975, 5690
AlwNI CAGNNNCTG 2 cut(s) 5798, 5822
Ama87I CYCGRG 2 cut(s) 386, 1187
Aor13HI TCCGGA 1 cut(s) 5029
AoxI GGCC 8 cut(s) 45, 88, 1937, 2055, 2073, 3299, 5129, 5673
ApoI RAATTY 8 cut(s) 334, 2267, 2618, 3727, 3908, 4425, 4685, 5664
ArsI GACNNNNNNTTYG 4 cut(s) 119, 151, 1271, 1303
Asp700I GAANNNNTTC 4 cut(s) 723, 1824, 2119, 5494
Asp718I GGTACC 2 cut(s) 1213, 1673
AsuC2I CCSGG 4 cut(s) 387, 388, 1188, 1189
AsuII TTCGAA 2 cut(s) 589, 3020
AsuNHI GCTAGC 1 cut(s) 313
AvaI CYCGRG 2 cut(s) 386, 1187
AvaII GGWCC 7 cut(s) 1279, 2315, 2555, 3221, 3477, 4129, 5915
AxyI CCTNAGG 2 cut(s) 3642, 4020
BaeI ACNNNNGTAYC 2 cut(s) 1368, 1401
BanI GGYRCC 6 cut(s) 146, 1213, 1673, 3041, 4412, 5390
BanII GRGCYC 3 cut(s) 2714, 4994, 5542
BauI CACGAG 2 cut(s) 2636, 3384
BbrPI CACGTG 1 cut(s) 1196
BbsI GAAGAC 8 cut(s) 1593, 2136, 3474, 3746, 4488, 5001, 5325, 5351
Bbv12I GWGCWC 4 cut(s) 2714, 4994, 5430, 5851
BbvCI CCTCAGC 1 cut(s) 5922
BceAI ACGGC 4 cut(s) 32, 160, 4637, 5246
BcgI CGANNNNNNTGC 2 cut(s) 3165, 3199
BciVI GTATCC 2 cut(s) 1396, 4735
BclI TGATCA 3 cut(s) 3106, 3123, 5002
BcnI CCSGG 4 cut(s) 387, 388, 1188, 1189
BcoDI GTCTC 4 cut(s) 2924, 3494, 3975, 5690
BcuI ACTAGT 1 cut(s) 3095
BfmI CTRYAG 8 cut(s) 345, 939, 3225, 5152, 5240, 5431, 5799, 5808
BfrI CTTAAG 2 cut(s) 2669, 4550
BfuAI ACCTGC 1 cut(s) 2749
BfuI GTATCC 2 cut(s) 1396, 4735
BglII AGATCT 3 cut(s) 2441, 2665, 3607
BlpI GCTNAGC 1 cut(s) 158
BmcAI AGTACT 1 cut(s) 714
Bme18I GGWCC 7 cut(s) 1279, 2315, 2555, 3221, 3477, 4129, 5915
BmeRI GACNNNNNGTC 2 cut(s) 3475, 3814
BmeT110I CYCGRG 2 cut(s) 386, 1187
BmgBI CACGTC 3 cut(s) 2970, 3993, 4541
BmiI GGNNCC 9 cut(s) 148, 1215, 1675, 3043, 3222, 3478, 4414, 5392, 5917
BmrI ACTGGG 5 cut(s) 1312, 1944, 4351, 4700, 5154
BmtI GCTAGC 1 cut(s) 317
BmuI ACTGGG 5 cut(s) 1312, 1944, 4351, 4700, 5154
BoxI GACNNNNGTC 2 cut(s) 2313, 5154
BpiI GAAGAC 8 cut(s) 1593, 2136, 3474, 3746, 4488, 5001, 5325, 5351
BplI GAGNNNNNCTC 2 cut(s) 4003, 4035
BpmI CTGGAG 5 cut(s) 324, 795, 3890, 4682, 5799
Bpu10I CCTNAGC 2 cut(s) 5880, 5922
Bpu1102I GCTNAGC 1 cut(s) 158
Bpu14I TTCGAA 2 cut(s) 589, 3020
BpuEI CTTGAG 2 cut(s) 323, 1642
BpuMI CCSGG 4 cut(s) 387, 388, 1188, 1189
Bsa29I ATCGAT 2 cut(s) 111, 3185
BsaAI YACGTR 3 cut(s) 502, 1196, 4154
BsaBI GATNNNNATC 2 cut(s) 633, 4071
BsaHI GRCGYC 3 cut(s) 805, 1112, 5729
BsaWI WCCGGW 1 cut(s) 5029
BsaXI ACNNNNNCTCC 4 cut(s) 17, 47, 4530, 4560
Bse118I RCCGGY 1 cut(s) 5393
Bse21I CCTNAGG 2 cut(s) 3642, 4020
Bse3DI GCAATG 4 cut(s) 462, 1862, 4522, 5082
Bse8I GATNNNNATC 2 cut(s) 633, 4071
BseAI TCCGGA 1 cut(s) 5029
BseCI ATCGAT 2 cut(s) 111, 3185
BseJI GATNNNNATC 2 cut(s) 633, 4071
BseMI GCAATG 4 cut(s) 462, 1862, 4522, 5082
BseRI GAGGAG 4 cut(s) 2230, 3177, 3943, 5105
BseYI CCCAGC 5 cut(s) 85, 1463, 5277, 5534, 5762
BsgI GTGCAG 4 cut(s) 225, 2457, 3687, 5418
Bsh1236I CGCG 2 cut(s) 14, 40
Bsh1285I CGRYCG 1 cut(s) 4625
BshFI GGCC 8 cut(s) 47, 90, 1939, 2057, 2075, 3301, 5131, 5675
BshNI GGYRCC 6 cut(s) 146, 1213, 1673, 3041, 4412, 5390
BshVI ATCGAT 2 cut(s) 111, 3185
BsiEI CGRYCG 1 cut(s) 4625
BsiHKAI GWGCWC 4 cut(s) 2714, 4994, 5430, 5851
BsiHKCI CYCGRG 2 cut(s) 386, 1187
BsiSI CCGG 6 cut(s) 387, 410, 1188, 3302, 5030, 5394
BslFI GGGAC 8 cut(s) 816, 2921, 2980, 3766, 5142, 5204, 5780, 5901
BsmAI GTCTC 4 cut(s) 2924, 3494, 3975, 5690
BsmFI GGGAC 8 cut(s) 816, 2921, 2980, 3766, 5142, 5204, 5780, 5901
BsmI GAATGC 7 cut(s) 1298, 1574, 4372, 4581, 4919, 5466, 5580
BsnI GGCC 8 cut(s) 47, 90, 1939, 2057, 2075, 3301, 5131, 5675
BsoBI CYCGRG 2 cut(s) 386, 1187
Bsp119I TTCGAA 2 cut(s) 589, 3020
Bsp1286I GDGCHC 5 cut(s) 2714, 4994, 5430, 5542, 5851
Bsp13I TCCGGA 1 cut(s) 5029
Bsp1407I TGTACA 3 cut(s) 323, 3208, 5839
Bsp1720I GCTNAGC 1 cut(s) 158
Bsp19I CCATGG 5 cut(s) 1243, 2089, 2311, 5222, 5927
Bsp68I TCGCGA 1 cut(s) 14
BspACI CCGC 9 cut(s) 23, 40, 55, 357, 1143, 1964, 4621, 4868, 5190
BspANI GGCC 8 cut(s) 47, 90, 1939, 2057, 2075, 3301, 5131, 5675
BspDI ATCGAT 2 cut(s) 111, 3185
BspEI TCCGGA 1 cut(s) 5029
BspFNI CGCG 2 cut(s) 14, 40
BspHI TCATGA 2 cut(s) 831, 5542
BspLI GGNNCC 9 cut(s) 148, 1215, 1675, 3043, 3222, 3478, 4414, 5392, 5917
BspMAI CTGCAG 1 cut(s) 5803
BspMI ACCTGC 1 cut(s) 2749
BspOI GCTAGC 1 cut(s) 317
BspQI GCTCTTC 3 cut(s) 2110, 4999, 5856
BspT104I TTCGAA 2 cut(s) 589, 3020
BspT107I GGYRCC 6 cut(s) 146, 1213, 1673, 3041, 4412, 5390
BspTI CTTAAG 2 cut(s) 2669, 4550
BsrDI GCAATG 4 cut(s) 462, 1862, 4522, 5082
BsrFI RCCGGY 1 cut(s) 5393
BsrGI TGTACA 3 cut(s) 323, 3208, 5839
BssAI RCCGGY 1 cut(s) 5393
BssNI GRCGYC 3 cut(s) 805, 1112, 5729
BssSI CACGAG 2 cut(s) 2636, 3384
Bst2BI CACGAG 2 cut(s) 2636, 3384
Bst6I CTCTTC 4 cut(s) 2110, 4099, 4999, 5856
BstACI GRCGYC 3 cut(s) 805, 1112, 5729
BstAFI CTTAAG 2 cut(s) 2669, 4550
BstAPI GCANNNNNTGC 2 cut(s) 5078, 5798
BstAUI TGTACA 3 cut(s) 323, 3208, 5839
BstBAI YACGTR 3 cut(s) 502, 1196, 4154
BstBI TTCGAA 2 cut(s) 589, 3020
BstC8I GCNNGC 8 cut(s) 315, 1776, 3060, 4328, 4581, 4585, 4955, 5079
BstDSI CCRYGG 6 cut(s) 1243, 2089, 2311, 3564, 5222, 5927
BstEII GGTNACC 1 cut(s) 359
BstENI CCTNNNNNAGG 1 cut(s) 4136
BstFNI CGCG 2 cut(s) 14, 40
BstMAI GTCTC 4 cut(s) 2924, 3494, 3975, 5690
BstMCI CGRYCG 1 cut(s) 4625
BstNSI RCATGY 8 cut(s) 1359, 1415, 1778, 2732, 3132, 3507, 3804, 5081
BstPAI GACNNNNGTC 2 cut(s) 2313, 5154
BstPI GGTNACC 1 cut(s) 359
BstSFI CTRYAG 8 cut(s) 345, 939, 3225, 5152, 5240, 5431, 5799, 5808
BstUI CGCG 2 cut(s) 14, 40
BstV2I GAAGAC 8 cut(s) 1593, 2136, 3474, 3746, 4488, 5001, 5325, 5351
BstXI CCANNNNNNTGG 2 cut(s) 200, 2623
Bsu15I ATCGAT 2 cut(s) 111, 3185
Bsu36I CCTNAGG 2 cut(s) 3642, 4020
BsuI GTATCC 2 cut(s) 1396, 4735
BsuRI GGCC 8 cut(s) 47, 90, 1939, 2057, 2075, 3301, 5131, 5675
BsuTUI ATCGAT 2 cut(s) 111, 3185
BtgI CCRYGG 6 cut(s) 1243, 2089, 2311, 3564, 5222, 5927
BtgZI GCGATG 2 cut(s) 44, 3171
BtrI CACGTC 3 cut(s) 2970, 3993, 4541
BtsIMutI CAGTG 7 cut(s) 1375, 1952, 3670, 4209, 4955, 5632, 5695
BtuMI TCGCGA 1 cut(s) 14
BveI ACCTGC 1 cut(s) 2749
Cac8I GCNNGC 8 cut(s) 315, 1776, 3060, 4328, 4581, 4585, 4955, 5079
CaiI CAGNNNCTG 2 cut(s) 5798, 5822
CciI TCATGA 2 cut(s) 831, 5542
Cfr10I RCCGGY 1 cut(s) 5393
Cfr9I CCCGGG 2 cut(s) 386, 1187
ClaI ATCGAT 2 cut(s) 111, 3185
CseI GACGC 2 cut(s) 1120, 5737
CspCI CAANNNNNGTGG 2 cut(s) 3256, 3291
DraIII CACNNNGTG 3 cut(s) 3068, 3386, 4676
DrdI GACNNNNNNGTC 1 cut(s) 113
DriI GACNNNNNGTC 2 cut(s) 3475, 3814
DseDI GACNNNNNNGTC 1 cut(s) 113
EaeI YGGCCR 1 cut(s) 3299
Eam1104I CTCTTC 4 cut(s) 2110, 4099, 4999, 5856
Eam1105I GACNNNNNGTC 2 cut(s) 3475, 3814
EarI CTCTTC 4 cut(s) 2110, 4099, 4999, 5856
EciI GGCGGA 1 cut(s) 38
Ecl136II GAGCTC 2 cut(s) 2712, 4992
Eco147I AGGCCT 2 cut(s) 2075, 5675
Eco24I GRGCYC 3 cut(s) 2714, 4994, 5542
Eco32I GATATC 2 cut(s) 1579, 4047
Eco47I GGWCC 7 cut(s) 1279, 2315, 2555, 3221, 3477, 4129, 5915
Eco53kI GAGCTC 2 cut(s) 2712, 4992
Eco57I CTGAAG 6 cut(s) 645, 1839, 1860, 4980, 4995, 5845
Eco72I CACGTG 1 cut(s) 1196
Eco81I CCTNAGG 2 cut(s) 3642, 4020
Eco88I CYCGRG 2 cut(s) 386, 1187
Eco91I GGTNACC 1 cut(s) 359
EcoICRI GAGCTC 2 cut(s) 2712, 4992
EcoNI CCTNNNNNAGG 1 cut(s) 4136
EcoO109I RGGNCCY 3 cut(s) 3221, 4129, 5915
EcoO65I GGTNACC 1 cut(s) 359
EcoRI GAATTC 2 cut(s) 334, 5664
EcoRV GATATC 2 cut(s) 1579, 4047
EcoT22I ATGCAT 2 cut(s) 3178, 4060
EcoT38I GRGCYC 3 cut(s) 2714, 4994, 5542
FaqI GGGAC 8 cut(s) 816, 2921, 2980, 3766, 5142, 5204, 5780, 5901
FauI CCCGC 2 cut(s) 48, 5183
FauNDI CATATG 2 cut(s) 1029, 1611
FbaI TGATCA 3 cut(s) 3106, 3123, 5002
FblI GTMKAC 2 cut(s) 117, 2737
FriOI GRGCYC 3 cut(s) 2714, 4994, 5542
GsaI CCCAGC 5 cut(s) 89, 1467, 5281, 5538, 5766
GsuI CTGGAG 5 cut(s) 324, 795, 3890, 4682, 5799
HaeIII GGCC 8 cut(s) 47, 90, 1939, 2057, 2075, 3301, 5131, 5675
HapII CCGG 6 cut(s) 387, 410, 1188, 3302, 5030, 5394
HgaI GACGC 2 cut(s) 1120, 5737
Hin1I GRCGYC 3 cut(s) 805, 1112, 5729
HincII GTYRAC 3 cut(s) 118, 680, 5604
HindII GTYRAC 3 cut(s) 118, 680, 5604
HindIII AAGCTT 3 cut(s) 2233, 2999, 4487
HpaII CCGG 6 cut(s) 387, 410, 1188, 3302, 5030, 5394
Hpy99I CGWCG 4 cut(s) 131, 146, 182, 4302
Hsp92I GRCGYC 3 cut(s) 805, 1112, 5729
Kpn2I TCCGGA 1 cut(s) 5029
KpnI GGTACC 2 cut(s) 1217, 1677
Ksp22I TGATCA 3 cut(s) 3106, 3123, 5002
LguI GCTCTTC 3 cut(s) 2110, 4999, 5856
LmnI GCTCC 8 cut(s) 322, 707, 2687, 3320, 3865, 4786, 5753, 5818
MfeI CAATTG 4 cut(s) 3270, 3879, 4533, 5475
MhlI GDGCHC 5 cut(s) 2714, 4994, 5430, 5542, 5851
MlyI GAGTC 7 cut(s) 1148, 3464, 3977, 4085, 4109, 4923, 5903
MmeI TCCRAC 2 cut(s) 3871, 3998
Mph1103I ATGCAT 2 cut(s) 3178, 4060
MroI TCCGGA 1 cut(s) 5029
MroXI GAANNNNTTC 4 cut(s) 723, 1824, 2119, 5494
MslI CAYNNNNRTG 6 cut(s) 450, 565, 1512, 2525, 3581, 3791
MspA1I CMGCKG 5 cut(s) 350, 1382, 4621, 5534, 5804
MspCI CTTAAG 2 cut(s) 2669, 4550
MspI CCGG 6 cut(s) 387, 410, 1188, 3302, 5030, 5394
MunI CAATTG 4 cut(s) 3270, 3879, 4533, 5475
Mva1269I GAATGC 7 cut(s) 1298, 1574, 4372, 4581, 4919, 5466, 5580
MvnI CGCG 2 cut(s) 14, 40
NciI CCSGG 4 cut(s) 387, 388, 1188, 1189
NcoI CCATGG 5 cut(s) 1243, 2089, 2311, 5222, 5927
NdeI CATATG 2 cut(s) 1029, 1611
NheI GCTAGC 1 cut(s) 313
NlaIV GGNNCC 9 cut(s) 148, 1215, 1675, 3043, 3222, 3478, 4414, 5392, 5917
NmeAIII GCCGAG 4 cut(s) 81, 1585, 1598, 2083
NmuCI GTSAC 8 cut(s) 766, 1108, 1191, 1882, 2288, 2359, 2548, 4101
NruI TCGCGA 1 cut(s) 14
NsiI ATGCAT 2 cut(s) 3178, 4060
NspI RCATGY 8 cut(s) 1359, 1415, 1778, 2732, 3132, 3507, 3804, 5081
NspV TTCGAA 2 cut(s) 589, 3020
PaeI GCATGC 2 cut(s) 1778, 5081
PagI TCATGA 2 cut(s) 831, 5542
PceI AGGCCT 2 cut(s) 2075, 5675
PciI ACATGT 4 cut(s) 1355, 2728, 3128, 3503
PciSI GCTCTTC 3 cut(s) 2110, 4999, 5856
PcsI WCGNNNNNNNCGW 4 cut(s) 26, 108, 123, 174
PctI GAATGC 7 cut(s) 1298, 1574, 4372, 4581, 4919, 5466, 5580
PdmI GAANNNNTTC 4 cut(s) 723, 1824, 2119, 5494
PflMI CCANNNNNTGG 3 cut(s) 972, 1249, 4712
PleI GAGTC 7 cut(s) 1147, 3464, 3976, 4085, 4108, 4922, 5902
PmaCI CACGTG 1 cut(s) 1196
PmlI CACGTG 1 cut(s) 1196
PpsI GAGTC 7 cut(s) 1147, 3464, 3976, 4085, 4108, 4922, 5902
Ppu21I YACGTR 3 cut(s) 502, 1196, 4154
PpuMI RGGWCCY 3 cut(s) 3221, 4129, 5915
PscI ACATGT 4 cut(s) 1355, 2728, 3128, 3503
PshAI GACNNNNGTC 2 cut(s) 2313, 5154
Psp124BI GAGCTC 2 cut(s) 2714, 4994
Psp5II RGGWCCY 3 cut(s) 3221, 4129, 5915
PspCI CACGTG 1 cut(s) 1196
PspEI GGTNACC 1 cut(s) 359
PspFI CCCAGC 5 cut(s) 85, 1463, 5277, 5534, 5762
PspN4I GGNNCC 9 cut(s) 148, 1215, 1675, 3043, 3222, 3478, 4414, 5392, 5917
PspPPI RGGWCCY 3 cut(s) 3221, 4129, 5915
PsrI GAACNNNNNNTAC 2 cut(s) 1891, 1923
PstI CTGCAG 1 cut(s) 5803
PstNI CAGNNNCTG 2 cut(s) 5798, 5822
PvuII CAGCTG 4 cut(s) 350, 1382, 5534, 5804
RruI TCGCGA 1 cut(s) 14
RseI CAYNNNNRTG 6 cut(s) 450, 565, 1512, 2525, 3581, 3791
SacI GAGCTC 2 cut(s) 2714, 4994
SalI GTCGAC 1 cut(s) 116
SapI GCTCTTC 3 cut(s) 2110, 4999, 5856
ScaI AGTACT 1 cut(s) 714
SchI GAGTC 7 cut(s) 1148, 3464, 3977, 4085, 4109, 4923, 5903
SduI GDGCHC 5 cut(s) 2714, 4994, 5430, 5542, 5851
SfcI CTRYAG 8 cut(s) 345, 939, 3225, 5152, 5240, 5431, 5799, 5808
SfuI TTCGAA 2 cut(s) 589, 3020
SinI GGWCC 7 cut(s) 1279, 2315, 2555, 3221, 3477, 4129, 5915
SmaI CCCGGG 2 cut(s) 388, 1189
SmiMI CAYNNNNRTG 6 cut(s) 450, 565, 1512, 2525, 3581, 3791
SmlI CTYRAG 4 cut(s) 302, 1657, 2669, 4550
SmoI CTYRAG 4 cut(s) 302, 1657, 2669, 4550
SpeI ACTAGT 1 cut(s) 3095
SphI GCATGC 2 cut(s) 1778, 5081
SseBI AGGCCT 2 cut(s) 2075, 5675
SsiI CCGC 9 cut(s) 23, 40, 55, 357, 1143, 1964, 4621, 4868, 5190
SspI AATATT 6 cut(s) 2002, 2907, 3025, 5215, 5349, 5567
SstI GAGCTC 2 cut(s) 2714, 4994
StuI AGGCCT 2 cut(s) 2075, 5675
TatI WGTACW 7 cut(s) 323, 712, 3208, 4505, 4543, 5521, 5839
TauI GCSGC 1 cut(s) 1966
TscAI CASTG 7 cut(s) 1375, 1959, 3670, 4209, 4955, 5632, 5695
TseFI GTSAC 8 cut(s) 766, 1108, 1191, 1882, 2288, 2359, 2548, 4101
Tsp45I GTSAC 8 cut(s) 766, 1108, 1191, 1882, 2288, 2359, 2548, 4101
TspGWI ACGGA 4 cut(s) 567, 2203, 3614, 4408
TspMI CCCGGG 2 cut(s) 386, 1187
TspRI CASTG 7 cut(s) 1375, 1959, 3670, 4209, 4955, 5632, 5695
Van91I CCANNNNNTGG 3 cut(s) 972, 1249, 4712
Vha464I CTTAAG 2 cut(s) 2669, 4550
VpaK11BI GGWCC 7 cut(s) 1279, 2315, 2555, 3221, 3477, 4129, 5915
XagI CCTNNNNNAGG 1 cut(s) 4136
XapI RAATTY 8 cut(s) 334, 2267, 2618, 3727, 3908, 4425, 4685, 5664
XbaI TCTAGA 3 cut(s) 898, 4604, 5500
XceI RCATGY 8 cut(s) 1359, 1415, 1778, 2732, 3132, 3507, 3804, 5081
XcmI CCANNNNNNNNNTGG 1 cut(s) 469
XmaI CCCGGG 2 cut(s) 386, 1187
XmiI GTMKAC 2 cut(s) 117, 2737
XmnI GAANNNNTTC 4 cut(s) 723, 1824, 2119, 5494
ZraI GACGTC 1 cut(s) 806
ZrmI AGTACT 1 cut(s) 714
Zsp2I ATGCAT 2 cut(s) 3178, 4060
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.