Autophagy-related protein C terminal domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G19190 AT3G19190 AT3G19190 |
| fragaria_vesca | FvH4_2g06220 |
| malus_domestica | MD05G1079500.v1.1 MD10G1093800.v1.1 |
| prunus_persica | Prupe.8G123400_v2.0.a1 Prupe.8G123400_v2.0.a1 |
| pyrus_communis | pycom05g07260 pycom10g07720 |
| rosa_chinensis | RchiOBHm_Chr6g0256971 |
| rosa_laevigata | RLG00000014666 |
| rosa_multiflora | Rmu_co8396705.1_g000001 Rmu_sc0000659.1_g000038 |
| rosa_roxburghii | Rroxscaffold_7G00208380 |
| rosa_rugosa | Rorug05G0576000 Rorug05G0576100 |
| rosa_samantha | Rh6AG094700 Rh6BG085900 Rh6CG082000 Rh6DG077700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 2046, 3558 |
| AarI | CACCTGC | 1 cut(s) | 1582 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 113, 562 |
| AatII | GACGTC | 1 cut(s) | 132 |
| Acc16I | TGCGCA | 1 cut(s) | 3852 |
| Acc36I | ACCTGC | 2 cut(s) | 1582, 2716 |
| Acc65I | GGTACC | 1 cut(s) | 1210 |
| AccB1I | GGYRCC | 3 cut(s) | 146, 1210, 3008 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 969, 1118 |
| AccI | GTMKAC | 2 cut(s) | 117, 2704 |
| AccII | CGCG | 2 cut(s) | 14, 40 |
| AciI | CCGC | 9 cut(s) | 23, 40, 206, 606, 846, 1140, 4464, 4582, 4829 |
| AcoI | YGGCCR | 3 cut(s) | 88, 3266, 3906 |
| AcuI | CTGAAG | 7 cut(s) | 615, 642, 1806, 1827, 2286, 4161, 4941 |
| AcvI | CACGTG | 1 cut(s) | 1193 |
| AcyI | GRCGYC | 3 cut(s) | 129, 1109, 3009 |
| AdeI | CACNNNGTG | 3 cut(s) | 3035, 3353, 4637 |
| AfaI | GTAC | 8 cut(s) | 325, 711, 1212, 1246, 1867, 3177, 4468, 4506 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 269, 969, 1118, 1561, 1639, 4460, 4777 |
| AflII | CTTAAG | 2 cut(s) | 2636, 4511 |
| AflIII | ACRYGT | 7 cut(s) | 1192, 1352, 2330, 3095, 3470, 3957, 4501 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 3442, 3781 |
| AhlI | ACTAGT | 1 cut(s) | 3062 |
| AjiI | CACGTC | 2 cut(s) | 3960, 4502 |
| AjnI | CCWGG | 8 cut(s) | 431, 808, 2210, 2370, 2929, 3004, 4147, 4620 |
| AjuI | GAANNNNNNNTTGG | 8 cut(s) | 222, 254, 1245, 1277, 1900, 1932, 4269, 4301 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 17, 49 |
| Alw21I | GWGCWC | 6 cut(s) | 303, 309, 962, 2681, 3637, 4955 |
| Alw26I | GTCTC | 5 cut(s) | 570, 2891, 3753, 3942, 4690 |
| Alw44I | GTGCAC | 1 cut(s) | 3633 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1169, 2428 |
| Ama87I | CYCGRG | 2 cut(s) | 302, 1569 |
| AoxI | GGCC | 6 cut(s) | 45, 88, 799, 1904, 3266, 3906 |
| ApaLI | GTGCAC | 1 cut(s) | 3633 |
| ApeKI | GCWGC | 5 cut(s) | 209, 1426, 3500, 3803, 4579 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 119, 151, 1268, 1300 |
| AseI | ATTAAT | 1 cut(s) | 4235 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 720, 1791, 2086, 3084, 5058 |
| Asp718I | GGTACC | 1 cut(s) | 1210 |
| AspLEI | GCGC | 2 cut(s) | 3011, 3853 |
| AspS9I | GGNCC | 8 cut(s) | 45, 547, 799, 1276, 1630, 1904, 2282, 2522 |
| AsuC2I | CCSGG | 3 cut(s) | 388, 562, 1185 |
| AsuNHI | GCTAGC | 1 cut(s) | 313 |
| AvaI | CYCGRG | 2 cut(s) | 302, 1569 |
| AvaII | GGWCC | 5 cut(s) | 547, 1276, 1630, 2282, 2522 |
| AxyI | CCTNAGG | 2 cut(s) | 3609, 3987 |
| BaeGI | GKGCMC | 2 cut(s) | 149, 3637 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1365, 1398 |
| BalI | TGGCCA | 1 cut(s) | 3268 |
| BamHI | GGATCC | 1 cut(s) | 3187 |
| BanI | GGYRCC | 3 cut(s) | 146, 1210, 3008 |
| BanII | GRGCYC | 4 cut(s) | 303, 309, 2681, 4955 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 1228, 1260, 4594, 4626 |
| BauI | CACGAG | 2 cut(s) | 308, 3351 |
| BbrPI | CACGTG | 1 cut(s) | 1193 |
| BbsI | GAAGAC | 7 cut(s) | 560, 2103, 3441, 3713, 4449, 4716, 4962 |
| Bbv12I | GWGCWC | 6 cut(s) | 303, 309, 962, 2681, 3637, 4955 |
| BbvCI | CCTCAGC | 1 cut(s) | 1170 |
| BbvI | GCAGC | 5 cut(s) | 221, 1438, 3487, 3790, 4591 |
| BceAI | ACGGC | 3 cut(s) | 32, 247, 786 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 3264, 3298 |
| BciT130I | CCWGG | 8 cut(s) | 433, 810, 2212, 2372, 2931, 3006, 4149, 4622 |
| BciVI | GTATCC | 1 cut(s) | 1393 |
| BclI | TGATCA | 3 cut(s) | 3073, 3090, 4963 |
| BcnI | CCSGG | 3 cut(s) | 388, 562, 1185 |
| BcoDI | GTCTC | 5 cut(s) | 570, 2891, 3753, 3942, 4690 |
| BcuI | ACTAGT | 1 cut(s) | 3062 |
| BfmI | CTRYAG | 2 cut(s) | 345, 936 |
| BfoI | RGCGCY | 1 cut(s) | 3012 |
| BfrI | CTTAAG | 2 cut(s) | 2636, 4511 |
| BfuAI | ACCTGC | 2 cut(s) | 1582, 2716 |
| BfuI | GTATCC | 1 cut(s) | 1393 |
| BglII | AGATCT | 3 cut(s) | 2408, 2632, 3574 |
| BisI | GCNGC | 6 cut(s) | 207, 210, 1427, 3501, 3804, 4580 |
| BlpI | GCTNAGC | 1 cut(s) | 158 |
| BlsI | GCNGC | 6 cut(s) | 208, 211, 1428, 3502, 3805, 4581 |
| BmcAI | AGTACT | 1 cut(s) | 711 |
| Bme18I | GGWCC | 5 cut(s) | 547, 1276, 1630, 2282, 2522 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 3442, 3781 |
| BmeT110I | CYCGRG | 2 cut(s) | 302, 1569 |
| BmgBI | CACGTC | 2 cut(s) | 3960, 4502 |
| BmgT120I | GGNCC | 8 cut(s) | 45, 547, 799, 1276, 1630, 1904, 2282, 2522 |
| BmiI | GGNNCC | 7 cut(s) | 148, 800, 1212, 2523, 3010, 3189, 3541 |
| BmrI | ACTGGG | 5 cut(s) | 843, 1309, 1911, 4584, 4661 |
| BmtI | GCTAGC | 1 cut(s) | 317 |
| BmuI | ACTGGG | 5 cut(s) | 843, 1309, 1911, 4584, 4661 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2280 |
| BpiI | GAAGAC | 7 cut(s) | 560, 2103, 3441, 3713, 4449, 4716, 4962 |
| BpmI | CTGGAG | 3 cut(s) | 324, 792, 4643 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1170 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 158 |
| BpuEI | CTTGAG | 2 cut(s) | 1639, 5131 |
| BpuMI | CCSGG | 3 cut(s) | 388, 562, 1185 |
| Bsa29I | ATCGAT | 1 cut(s) | 111 |
| BsaAI | YACGTR | 2 cut(s) | 499, 1193 |
| BsaBI | GATNNNNATC | 3 cut(s) | 630, 1494, 4038 |
| BsaHI | GRCGYC | 3 cut(s) | 129, 1109, 3009 |
| BsaI | GGTCTC | 1 cut(s) | 570 |
| BsaWI | WCCGGW | 1 cut(s) | 549 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 17, 47 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 269, 969, 1118, 1561, 1639, 4460, 4777 |
| Bse21I | CCTNAGG | 2 cut(s) | 3609, 3987 |
| Bse3DI | GCAATG | 5 cut(s) | 459, 1246, 1829, 3603, 5043 |
| Bse8I | GATNNNNATC | 3 cut(s) | 630, 1494, 4038 |
| BseBI | CCWGG | 8 cut(s) | 433, 810, 2212, 2372, 2931, 3006, 4149, 4622 |
| BseCI | ATCGAT | 1 cut(s) | 111 |
| BseJI | GATNNNNATC | 3 cut(s) | 630, 1494, 4038 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 269, 969, 1118, 1561, 1639, 4460, 4777 |
| BseMI | GCAATG | 5 cut(s) | 459, 1246, 1829, 3603, 5043 |
| BseMII | CTCAG | 8 cut(s) | 172, 1161, 2849, 3453, 3600, 4056, 4248, 4316 |
| BseRI | GAGGAG | 3 cut(s) | 3144, 3335, 4109 |
| BseSI | GKGCMC | 2 cut(s) | 149, 3637 |
| BseXI | GCAGC | 5 cut(s) | 221, 1438, 3487, 3790, 4591 |
| BseYI | CCCAGC | 1 cut(s) | 1460 |
| Bsh1236I | CGCG | 2 cut(s) | 14, 40 |
| Bsh1285I | CGRYCG | 1 cut(s) | 4586 |
| BshFI | GGCC | 6 cut(s) | 47, 90, 801, 1906, 3268, 3908 |
| BshNI | GGYRCC | 3 cut(s) | 146, 1210, 3008 |
| BshVI | ATCGAT | 1 cut(s) | 111 |
| BsiEI | CGRYCG | 1 cut(s) | 4586 |
| BsiHKAI | GWGCWC | 6 cut(s) | 303, 309, 962, 2681, 3637, 4955 |
| BsiHKCI | CYCGRG | 2 cut(s) | 302, 1569 |
| BsiSI | CCGG | 4 cut(s) | 387, 550, 561, 1185 |
| BslFI | GGGAC | 1 cut(s) | 3481 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 269, 969, 1118, 1561, 1639, 4460, 4777 |
| BsmAI | GTCTC | 5 cut(s) | 570, 2891, 3753, 3942, 4690 |
| BsmFI | GGGAC | 1 cut(s) | 3481 |
| BsmI | GAATGC | 5 cut(s) | 608, 1295, 2155, 2299, 4880 |
| BsnI | GGCC | 6 cut(s) | 47, 90, 801, 1906, 3268, 3908 |
| Bso31I | GGTCTC | 1 cut(s) | 570 |
| BsoBI | CYCGRG | 2 cut(s) | 302, 1569 |
| Bsp1286I | GDGCHC | 7 cut(s) | 149, 303, 309, 962, 2681, 3637, 4955 |
| Bsp1407I | TGTACA | 2 cut(s) | 1865, 3175 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 158 |
| Bsp19I | CCATGG | 1 cut(s) | 2278 |
| Bsp68I | TCGCGA | 1 cut(s) | 14 |
| BspACI | CCGC | 9 cut(s) | 23, 40, 206, 606, 846, 1140, 4464, 4582, 4829 |
| BspANI | GGCC | 6 cut(s) | 47, 90, 801, 1906, 3268, 3908 |
| BspCNI | CTCAG | 8 cut(s) | 171, 1162, 2848, 3452, 3601, 4057, 4249, 4315 |
| BspDI | ATCGAT | 1 cut(s) | 111 |
| BspFNI | CGCG | 2 cut(s) | 14, 40 |
| BspHI | TCATGA | 1 cut(s) | 2602 |
| BspLI | GGNNCC | 7 cut(s) | 148, 800, 1212, 2523, 3010, 3189, 3541 |
| BspMI | ACCTGC | 2 cut(s) | 1582, 2716 |
| BspOI | GCTAGC | 1 cut(s) | 317 |
| BspQI | GCTCTTC | 2 cut(s) | 2077, 4960 |
| BspT107I | GGYRCC | 3 cut(s) | 146, 1210, 3008 |
| BspTI | CTTAAG | 2 cut(s) | 2636, 4511 |
| BspTNI | GGTCTC | 1 cut(s) | 570 |
| BsrDI | GCAATG | 5 cut(s) | 459, 1246, 1829, 3603, 5043 |
| BsrGI | TGTACA | 2 cut(s) | 1865, 3175 |
| BssNI | GRCGYC | 3 cut(s) | 129, 1109, 3009 |
| BssSI | CACGAG | 2 cut(s) | 308, 3351 |
| BssT1I | CCWWGG | 7 cut(s) | 576, 878, 2278, 2525, 2905, 3463, 4745 |
| Bst2BI | CACGAG | 2 cut(s) | 308, 3351 |
| Bst2UI | CCWGG | 8 cut(s) | 433, 810, 2212, 2372, 2931, 3006, 4149, 4622 |
| Bst6I | CTCTTC | 5 cut(s) | 835, 2077, 2212, 4854, 4960 |
| BstACI | GRCGYC | 3 cut(s) | 129, 1109, 3009 |
| BstAFI | CTTAAG | 2 cut(s) | 2636, 4511 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1082, 5039 |
| BstAUI | TGTACA | 2 cut(s) | 1865, 3175 |
| BstBAI | YACGTR | 2 cut(s) | 499, 1193 |
| BstC8I | GCNNGC | 6 cut(s) | 315, 1743, 3027, 4546, 4916, 5040 |
| BstDSI | CCRYGG | 3 cut(s) | 263, 2056, 2278 |
| BstEII | GGTNACC | 1 cut(s) | 359 |
| BstFNI | CGCG | 2 cut(s) | 14, 40 |
| BstH2I | RGCGCY | 1 cut(s) | 3012 |
| BstHHI | GCGC | 2 cut(s) | 3011, 3853 |
| BstMAI | GTCTC | 5 cut(s) | 570, 2891, 3753, 3942, 4690 |
| BstMCI | CGRYCG | 1 cut(s) | 4586 |
| BstNI | CCWGG | 8 cut(s) | 433, 810, 2212, 2372, 2931, 3006, 4149, 4622 |
| BstNSI | RCATGY | 6 cut(s) | 1356, 1745, 3099, 3474, 3771, 5042 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2280 |
| BstPI | GGTNACC | 1 cut(s) | 359 |
| BstSFI | CTRYAG | 2 cut(s) | 345, 936 |
| BstSLI | GKGCMC | 2 cut(s) | 149, 3637 |
| BstUI | CGCG | 2 cut(s) | 14, 40 |
| BstV1I | GCAGC | 5 cut(s) | 221, 1438, 3487, 3790, 4591 |
| BstV2I | GAAGAC | 7 cut(s) | 560, 2103, 3441, 3713, 4449, 4716, 4962 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 200 |
| Bsu15I | ATCGAT | 1 cut(s) | 111 |
| Bsu36I | CCTNAGG | 2 cut(s) | 3609, 3987 |
| BsuI | GTATCC | 1 cut(s) | 1393 |
| BsuRI | GGCC | 6 cut(s) | 47, 90, 801, 1906, 3268, 3908 |
| BsuTUI | ATCGAT | 1 cut(s) | 111 |
| BtgI | CCRYGG | 3 cut(s) | 263, 2056, 2278 |
| BtgZI | GCGATG | 1 cut(s) | 44 |
| BtrI | CACGTC | 2 cut(s) | 3960, 4502 |
| BtsIMutI | CAGTG | 8 cut(s) | 421, 639, 1372, 1875, 1919, 3637, 4176, 4916 |
| BtuMI | TCGCGA | 1 cut(s) | 14 |
| BveI | ACCTGC | 2 cut(s) | 1582, 2716 |
| Cac8I | GCNNGC | 6 cut(s) | 315, 1743, 3027, 4546, 4916, 5040 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1169, 2428 |
| CciI | TCATGA | 1 cut(s) | 2602 |
| CfoI | GCGC | 2 cut(s) | 3011, 3853 |
| Cfr13I | GGNCC | 8 cut(s) | 45, 547, 799, 1276, 1630, 1904, 2282, 2522 |
| ClaI | ATCGAT | 1 cut(s) | 111 |
| CseI | GACGC | 1 cut(s) | 1117 |
| Csp6I | GTAC | 8 cut(s) | 324, 710, 1211, 1245, 1866, 3176, 4467, 4505 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 3223, 3258 |
| CviQI | GTAC | 8 cut(s) | 324, 710, 1211, 1245, 1866, 3176, 4467, 4505 |
| DinI | GGCGCC | 1 cut(s) | 3010 |
| DraIII | CACNNNGTG | 3 cut(s) | 3035, 3353, 4637 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 113, 562 |
| DriI | GACNNNNNGTC | 2 cut(s) | 3442, 3781 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 113, 562 |
| EaeI | YGGCCR | 3 cut(s) | 88, 3266, 3906 |
| Eam1104I | CTCTTC | 5 cut(s) | 835, 2077, 2212, 4854, 4960 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 3442, 3781 |
| EarI | CTCTTC | 5 cut(s) | 835, 2077, 2212, 4854, 4960 |
| EciI | GGCGGA | 2 cut(s) | 38, 861 |
| Ecl136II | GAGCTC | 4 cut(s) | 301, 307, 2679, 4953 |
| Eco130I | CCWWGG | 7 cut(s) | 576, 878, 2278, 2525, 2905, 3463, 4745 |
| Eco24I | GRGCYC | 4 cut(s) | 303, 309, 2681, 4955 |
| Eco31I | GGTCTC | 1 cut(s) | 570 |
| Eco32I | GATATC | 2 cut(s) | 1576, 4014 |
| Eco47I | GGWCC | 5 cut(s) | 547, 1276, 1630, 2282, 2522 |
| Eco53kI | GAGCTC | 4 cut(s) | 301, 307, 2679, 4953 |
| Eco57I | CTGAAG | 7 cut(s) | 615, 642, 1806, 1827, 2286, 4161, 4941 |
| Eco72I | CACGTG | 1 cut(s) | 1193 |
| Eco81I | CCTNAGG | 2 cut(s) | 3609, 3987 |
| Eco88I | CYCGRG | 2 cut(s) | 302, 1569 |
| Eco91I | GGTNACC | 1 cut(s) | 359 |
| EcoICRI | GAGCTC | 4 cut(s) | 301, 307, 2679, 4953 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2522 |
| EcoO65I | GGTNACC | 1 cut(s) | 359 |
| EcoRI | GAATTC | 1 cut(s) | 334 |
| EcoRII | CCWGG | 8 cut(s) | 431, 808, 2210, 2370, 2929, 3004, 4147, 4620 |
| EcoRV | GATATC | 2 cut(s) | 1576, 4014 |
| EcoT14I | CCWWGG | 7 cut(s) | 576, 878, 2278, 2525, 2905, 3463, 4745 |
| EcoT22I | ATGCAT | 2 cut(s) | 3145, 4027 |
| EcoT38I | GRGCYC | 4 cut(s) | 303, 309, 2681, 4955 |
| EgeI | GGCGCC | 1 cut(s) | 3010 |
| EheI | GGCGCC | 1 cut(s) | 3010 |
| ErhI | CCWWGG | 7 cut(s) | 576, 878, 2278, 2525, 2905, 3463, 4745 |
| FaqI | GGGAC | 1 cut(s) | 3481 |
| FauNDI | CATATG | 1 cut(s) | 1608 |
| FbaI | TGATCA | 3 cut(s) | 3073, 3090, 4963 |
| FblI | GTMKAC | 2 cut(s) | 117, 2704 |
| Fnu4HI | GCNGC | 6 cut(s) | 207, 210, 1427, 3501, 3804, 4580 |
| FriOI | GRGCYC | 4 cut(s) | 303, 309, 2681, 4955 |
| Fsp4HI | GCNGC | 6 cut(s) | 207, 210, 1427, 3501, 3804, 4580 |
| FspI | TGCGCA | 1 cut(s) | 3852 |
| GlaI | GCGC | 2 cut(s) | 3010, 3852 |
| GluI | GCNGC | 6 cut(s) | 207, 210, 1427, 3501, 3804, 4580 |
| GsaI | CCCAGC | 1 cut(s) | 1464 |
| GsuI | CTGGAG | 3 cut(s) | 324, 792, 4643 |
| HaeII | RGCGCY | 1 cut(s) | 3012 |
| HaeIII | GGCC | 6 cut(s) | 47, 90, 801, 1906, 3268, 3908 |
| HapII | CCGG | 4 cut(s) | 387, 550, 561, 1185 |
| HgaI | GACGC | 1 cut(s) | 1117 |
| HhaI | GCGC | 2 cut(s) | 3011, 3853 |
| Hin1I | GRCGYC | 3 cut(s) | 129, 1109, 3009 |
| Hin6I | GCGC | 2 cut(s) | 3009, 3851 |
| HinP1I | GCGC | 2 cut(s) | 3009, 3851 |
| HincII | GTYRAC | 2 cut(s) | 118, 677 |
| HindII | GTYRAC | 2 cut(s) | 118, 677 |
| HindIII | AAGCTT | 3 cut(s) | 2200, 2966, 4448 |
| HpaII | CCGG | 4 cut(s) | 387, 550, 561, 1185 |
| Hpy99I | CGWCG | 1 cut(s) | 131 |
| HpyCH4IV | ACGT | 9 cut(s) | 129, 498, 1192, 2173, 2332, 3118, 3959, 4501, 4659 |
| HpySE526I | ACGT | 9 cut(s) | 129, 498, 1192, 2173, 2332, 3118, 3959, 4501, 4659 |
| Hsp92I | GRCGYC | 3 cut(s) | 129, 1109, 3009 |
| HspAI | GCGC | 2 cut(s) | 3009, 3851 |
| KasI | GGCGCC | 1 cut(s) | 3008 |
| KpnI | GGTACC | 1 cut(s) | 1214 |
| Ksp22I | TGATCA | 3 cut(s) | 3073, 3090, 4963 |
| LguI | GCTCTTC | 2 cut(s) | 2077, 4960 |
| LmnI | GCTCC | 7 cut(s) | 322, 704, 2574, 2654, 3832, 4096, 4747 |
| Lsp1109I | GCAGC | 5 cut(s) | 221, 1438, 3487, 3790, 4591 |
| MaeII | ACGT | 9 cut(s) | 129, 498, 1192, 2173, 2332, 3118, 3959, 4501, 4659 |
| MfeI | CAATTG | 3 cut(s) | 3237, 3846, 3950 |
| MhlI | GDGCHC | 7 cut(s) | 149, 303, 309, 962, 2681, 3637, 4955 |
| MlsI | TGGCCA | 1 cut(s) | 3268 |
| MluNI | TGGCCA | 1 cut(s) | 3268 |
| Mly113I | GGCGCC | 1 cut(s) | 3009 |
| MlyI | GAGTC | 6 cut(s) | 66, 3431, 3452, 3944, 4076, 4884 |
| MmeI | TCCRAC | 2 cut(s) | 3838, 3965 |
| Mox20I | TGGCCA | 1 cut(s) | 3268 |
| Mph1103I | ATGCAT | 2 cut(s) | 3145, 4027 |
| MroXI | GAANNNNTTC | 5 cut(s) | 720, 1791, 2086, 3084, 5058 |
| MscI | TGGCCA | 1 cut(s) | 3268 |
| MslI | CAYNNNNRTG | 3 cut(s) | 447, 2492, 3758 |
| Msp20I | TGGCCA | 1 cut(s) | 3268 |
| MspA1I | CMGCKG | 3 cut(s) | 350, 1379, 4582 |
| MspCI | CTTAAG | 2 cut(s) | 2636, 4511 |
| MspI | CCGG | 4 cut(s) | 387, 550, 561, 1185 |
| MunI | CAATTG | 3 cut(s) | 3237, 3846, 3950 |
| Mva1269I | GAATGC | 5 cut(s) | 608, 1295, 2155, 2299, 4880 |
| MvaI | CCWGG | 8 cut(s) | 433, 810, 2212, 2372, 2931, 3006, 4149, 4622 |
| MvnI | CGCG | 2 cut(s) | 14, 40 |
| NarI | GGCGCC | 1 cut(s) | 3009 |
| NciI | CCSGG | 3 cut(s) | 388, 562, 1185 |
| NcoI | CCATGG | 1 cut(s) | 2278 |
| NdeI | CATATG | 1 cut(s) | 1608 |
| NheI | GCTAGC | 1 cut(s) | 313 |
| NlaIV | GGNNCC | 7 cut(s) | 148, 800, 1212, 2523, 3010, 3189, 3541 |
| NmeAIII | GCCGAG | 4 cut(s) | 66, 81, 166, 1582 |
| NruI | TCGCGA | 1 cut(s) | 14 |
| NsbI | TGCGCA | 1 cut(s) | 3852 |
| NsiI | ATGCAT | 2 cut(s) | 3145, 4027 |
| NspI | RCATGY | 6 cut(s) | 1356, 1745, 3099, 3474, 3771, 5042 |
| PaeI | GCATGC | 2 cut(s) | 1745, 5042 |
| PaeR7I | CTCGAG | 1 cut(s) | 302 |
| PagI | TCATGA | 1 cut(s) | 2602 |
| PaqCI | CACCTGC | 1 cut(s) | 1582 |
| PciI | ACATGT | 3 cut(s) | 1352, 3095, 3470 |
| PciSI | GCTCTTC | 2 cut(s) | 2077, 4960 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 26, 108, 123 |
| PctI | GAATGC | 5 cut(s) | 608, 1295, 2155, 2299, 4880 |
| PdmI | GAANNNNTTC | 5 cut(s) | 720, 1791, 2086, 3084, 5058 |
| PflFI | GACNNNGTC | 1 cut(s) | 4318 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 969, 1118 |
| PkrI | GCNGC | 6 cut(s) | 208, 211, 1428, 3502, 3805, 4581 |
| PleI | GAGTC | 6 cut(s) | 65, 3431, 3451, 3943, 4075, 4883 |
| PluTI | GGCGCC | 1 cut(s) | 3012 |
| PmaCI | CACGTG | 1 cut(s) | 1193 |
| PmlI | CACGTG | 1 cut(s) | 1193 |
| PpsI | GAGTC | 6 cut(s) | 65, 3431, 3451, 3943, 4075, 4883 |
| Ppu21I | YACGTR | 2 cut(s) | 499, 1193 |
| PpuMI | RGGWCCY | 1 cut(s) | 2522 |
| PscI | ACATGT | 3 cut(s) | 1352, 3095, 3470 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2280 |
| PshBI | ATTAAT | 1 cut(s) | 4235 |
| PsiI | TTATAA | 2 cut(s) | 2046, 3558 |
| Psp124BI | GAGCTC | 4 cut(s) | 303, 309, 2681, 4955 |
| Psp5II | RGGWCCY | 1 cut(s) | 2522 |
| Psp6I | CCWGG | 8 cut(s) | 431, 808, 2210, 2370, 2929, 3004, 4147, 4620 |
| PspCI | CACGTG | 1 cut(s) | 1193 |
| PspEI | GGTNACC | 1 cut(s) | 359 |
| PspFI | CCCAGC | 1 cut(s) | 1460 |
| PspGI | CCWGG | 8 cut(s) | 431, 808, 2210, 2370, 2929, 3004, 4147, 4620 |
| PspN4I | GGNNCC | 7 cut(s) | 148, 800, 1212, 2523, 3010, 3189, 3541 |
| PspPI | GGNCC | 8 cut(s) | 45, 547, 799, 1276, 1630, 1904, 2282, 2522 |
| PspPPI | RGGWCCY | 1 cut(s) | 2522 |
| PspXI | VCTCGAGB | 1 cut(s) | 302 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1858, 1890 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1169, 2428 |
| PsyI | GACNNNGTC | 1 cut(s) | 4318 |
| PvuII | CAGCTG | 2 cut(s) | 350, 1379 |
| RruI | TCGCGA | 1 cut(s) | 14 |
| RsaI | GTAC | 8 cut(s) | 325, 711, 1212, 1246, 1867, 3177, 4468, 4506 |
| RsaNI | GTAC | 8 cut(s) | 324, 710, 1211, 1245, 1866, 3176, 4467, 4505 |
| RseI | CAYNNNNRTG | 3 cut(s) | 447, 2492, 3758 |
| SacI | GAGCTC | 4 cut(s) | 303, 309, 2681, 4955 |
| SalI | GTCGAC | 1 cut(s) | 116 |
| SapI | GCTCTTC | 2 cut(s) | 2077, 4960 |
| SatI | GCNGC | 6 cut(s) | 207, 210, 1427, 3501, 3804, 4580 |
| Sau96I | GGNCC | 8 cut(s) | 45, 547, 799, 1276, 1630, 1904, 2282, 2522 |
| ScaI | AGTACT | 1 cut(s) | 711 |
| SchI | GAGTC | 6 cut(s) | 66, 3431, 3452, 3944, 4076, 4884 |
| SduI | GDGCHC | 7 cut(s) | 149, 303, 309, 962, 2681, 3637, 4955 |
| SfcI | CTRYAG | 2 cut(s) | 345, 936 |
| SfoI | GGCGCC | 1 cut(s) | 3010 |
| Sfr274I | CTCGAG | 1 cut(s) | 302 |
| SinI | GGWCC | 5 cut(s) | 547, 1276, 1630, 2282, 2522 |
| SlaI | CTCGAG | 1 cut(s) | 302 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 447, 2492, 3758 |
| SmlI | CTYRAG | 5 cut(s) | 302, 1654, 2636, 4511, 5110 |
| SmoI | CTYRAG | 5 cut(s) | 302, 1654, 2636, 4511, 5110 |
| SpeI | ACTAGT | 1 cut(s) | 3062 |
| SphI | GCATGC | 2 cut(s) | 1745, 5042 |
| SsiI | CCGC | 9 cut(s) | 23, 40, 206, 606, 846, 1140, 4464, 4582, 4829 |
| SspDI | GGCGCC | 1 cut(s) | 3008 |
| SspI | AATATT | 2 cut(s) | 2874, 4387 |
| SstI | GAGCTC | 4 cut(s) | 303, 309, 2681, 4955 |
| StyI | CCWWGG | 7 cut(s) | 576, 878, 2278, 2525, 2905, 3463, 4745 |
| TaiI | ACGT | 9 cut(s) | 132, 501, 1195, 2176, 2335, 3121, 3962, 4504, 4662 |
| TatI | WGTACW | 4 cut(s) | 709, 1865, 3175, 4504 |
| TauI | GCSGC | 1 cut(s) | 209 |
| TscAI | CASTG | 8 cut(s) | 421, 646, 1372, 1875, 1926, 3637, 4176, 4916 |
| TseI | GCWGC | 5 cut(s) | 209, 1426, 3500, 3803, 4579 |
| TspGWI | ACGGA | 1 cut(s) | 341 |
| TspRI | CASTG | 8 cut(s) | 421, 646, 1372, 1875, 1926, 3637, 4176, 4916 |
| Tth111I | GACNNNGTC | 1 cut(s) | 4318 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 969, 1118 |
| Vha464I | CTTAAG | 2 cut(s) | 2636, 4511 |
| VneI | GTGCAC | 1 cut(s) | 3633 |
| VpaK11BI | GGWCC | 5 cut(s) | 547, 1276, 1630, 2282, 2522 |
| VspI | ATTAAT | 1 cut(s) | 4235 |
| XbaI | TCTAGA | 1 cut(s) | 4565 |
| XceI | RCATGY | 6 cut(s) | 1356, 1745, 3099, 3474, 3771, 5042 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 466, 4387 |
| XhoI | CTCGAG | 1 cut(s) | 302 |
| XmiI | GTMKAC | 2 cut(s) | 117, 2704 |
| XmnI | GAANNNNTTC | 5 cut(s) | 720, 1791, 2086, 3084, 5058 |
| ZraI | GACGTC | 1 cut(s) | 130 |
| ZrmI | AGTACT | 1 cut(s) | 711 |
| Zsp2I | ATGCAT | 2 cut(s) | 3145, 4027 |