Autophagy-related protein C terminal domain
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G19190 AT3G19190 AT3G19190 |
| fragaria_vesca | FvH4_2g06220 |
| malus_domestica | MD05G1079500.v1.1 MD10G1093800.v1.1 |
| prunus_persica | Prupe.8G123400_v2.0.a1 Prupe.8G123400_v2.0.a1 |
| pyrus_communis | pycom05g07260 pycom10g07720 |
| rosa_chinensis | RchiOBHm_Chr6g0256971 |
| rosa_laevigata | RLG00000014666 |
| rosa_multiflora | Rmu_co8396705.1_g000001 Rmu_sc0000659.1_g000038 |
| rosa_roxburghii | Rroxscaffold_7G00208380 |
| rosa_rugosa | Rorug05G0576000 Rorug05G0576100 |
| rosa_samantha | Rh6AG094700 Rh6BG085900 Rh6CG082000 Rh6DG077700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 331 |
| Acc36I | ACCTGC | 2 cut(s) | 1579, 4073 |
| Acc65I | GGTACC | 1 cut(s) | 1216 |
| AccB1I | GGYRCC | 4 cut(s) | 152, 818, 1216, 3008 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1124 |
| AccI | GTMKAC | 1 cut(s) | 2707 |
| AccII | CGCG | 7 cut(s) | 20, 46, 176, 2687, 3120, 3354, 4887 |
| AccIII | TCCGGA | 2 cut(s) | 1403, 4649 |
| AclI | AACGTT | 1 cut(s) | 5598 |
| AcoI | YGGCCR | 1 cut(s) | 5502 |
| AcuI | CTGAAG | 7 cut(s) | 648, 1833, 2601, 3423, 4206, 4440, 5815 |
| AcyI | GRCGYC | 1 cut(s) | 120 |
| AdeI | CACNNNGTG | 2 cut(s) | 818, 4160 |
| AflII | CTTAAG | 3 cut(s) | 4523, 5219, 5426 |
| AflIII | ACRYGT | 7 cut(s) | 617, 1358, 2333, 2698, 3490, 4513, 4885 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 3790 |
| AjiI | CACGTC | 1 cut(s) | 4514 |
| AjuI | GAANNNNNNNTTGG | 8 cut(s) | 74, 106, 228, 260, 1251, 1283, 4920, 4952 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 23, 55 |
| Alw21I | GWGCWC | 6 cut(s) | 2684, 2792, 3349, 4165, 4967, 5814 |
| Alw26I | GTCTC | 3 cut(s) | 1563, 2989, 5261 |
| Alw44I | GTGCAC | 3 cut(s) | 3345, 4161, 5810 |
| AlwNI | CAGNNNCTG | 5 cut(s) | 1046, 1175, 3446, 4184, 5768 |
| Ama87I | CYCGRG | 1 cut(s) | 5757 |
| Aor13HI | TCCGGA | 2 cut(s) | 1403, 4649 |
| ApaLI | GTGCAC | 3 cut(s) | 3345, 4161, 5810 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 745, 777 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 795, 2092, 4552, 4820, 5467 |
| Asp718I | GGTACC | 1 cut(s) | 1216 |
| AspA2I | CCTAGG | 1 cut(s) | 1552 |
| AspLEI | GCGC | 5 cut(s) | 178, 332, 1274, 5566, 5819 |
| AspS9I | GGNCC | 7 cut(s) | 51, 2285, 2476, 2525, 3028, 4792, 5735 |
| AsuC2I | CCSGG | 3 cut(s) | 816, 4986, 5509 |
| AsuII | TTCGAA | 2 cut(s) | 592, 4814 |
| AsuNHI | GCTAGC | 1 cut(s) | 3157 |
| AvaI | CYCGRG | 1 cut(s) | 5757 |
| AvaII | GGWCC | 2 cut(s) | 4792, 5735 |
| AvrII | CCTAGG | 1 cut(s) | 1552 |
| AxyI | CCTNAGG | 1 cut(s) | 3618 |
| BaeGI | GKGCMC | 4 cut(s) | 155, 3349, 4165, 5814 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1779, 1812 |
| BamHI | GGATCC | 1 cut(s) | 3187 |
| BanI | GGYRCC | 4 cut(s) | 152, 818, 1216, 3008 |
| BanII | GRGCYC | 6 cut(s) | 2684, 2792, 3137, 3405, 3453, 4967 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 4606, 4638 |
| BauI | CACGAG | 1 cut(s) | 493 |
| BbsI | GAAGAC | 3 cut(s) | 2109, 4461, 5324 |
| Bbv12I | GWGCWC | 6 cut(s) | 2684, 2792, 3349, 4165, 4967, 5814 |
| BceAI | ACGGC | 5 cut(s) | 38, 792, 2463, 4289, 5121 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 201, 235, 4029, 4063 |
| BclI | TGATCA | 3 cut(s) | 3073, 4099, 4975 |
| BcnI | CCSGG | 3 cut(s) | 816, 4986, 5509 |
| BcoDI | GTCTC | 3 cut(s) | 1563, 2989, 5261 |
| BfmI | CTRYAG | 4 cut(s) | 5125, 5213, 5616, 5769 |
| BfrI | CTTAAG | 3 cut(s) | 4523, 5219, 5426 |
| BfuAI | ACCTGC | 2 cut(s) | 1579, 4073 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 3686, 5510 |
| BglII | AGATCT | 3 cut(s) | 2090, 2635, 3583 |
| BlnI | CCTAGG | 1 cut(s) | 1552 |
| BlpI | GCTNAGC | 1 cut(s) | 2554 |
| BmcAI | AGTACT | 1 cut(s) | 1888 |
| Bme18I | GGWCC | 2 cut(s) | 4792, 5735 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 3790 |
| BmeT110I | CYCGRG | 1 cut(s) | 5757 |
| BmgBI | CACGTC | 1 cut(s) | 4514 |
| BmgT120I | GGNCC | 7 cut(s) | 51, 2285, 2476, 2525, 3028, 4792, 5735 |
| BmiI | GGNNCC | 8 cut(s) | 154, 250, 820, 1218, 1803, 3010, 3189, 4755 |
| BmrI | ACTGGG | 1 cut(s) | 3447 |
| BmtI | GCTAGC | 1 cut(s) | 3161 |
| BmuI | ACTGGG | 1 cut(s) | 3447 |
| BoxI | GACNNNNGTC | 1 cut(s) | 5127 |
| BpiI | GAAGAC | 3 cut(s) | 2109, 4461, 5324 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 326, 358, 3985, 4017 |
| BpmI | CTGGAG | 3 cut(s) | 329, 3136, 4259 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1425 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2554 |
| Bpu14I | TTCGAA | 2 cut(s) | 592, 4814 |
| BpuEI | CTTGAG | 6 cut(s) | 740, 1636, 2258, 2698, 2806, 3395 |
| BpuMI | CCSGG | 3 cut(s) | 816, 4986, 5509 |
| BsaAI | YACGTR | 1 cut(s) | 505 |
| BsaBI | GATNNNNATC | 2 cut(s) | 4056, 4728 |
| BsaHI | GRCGYC | 1 cut(s) | 120 |
| BsaWI | WCCGGW | 2 cut(s) | 1403, 4649 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 23, 53, 302, 332, 4649, 4679 |
| Bse21I | CCTNAGG | 1 cut(s) | 3618 |
| Bse3DI | GCAATG | 3 cut(s) | 1835, 4131, 4495 |
| Bse8I | GATNNNNATC | 2 cut(s) | 4056, 4728 |
| BseAI | TCCGGA | 2 cut(s) | 1403, 4649 |
| BseJI | GATNNNNATC | 2 cut(s) | 4056, 4728 |
| BseMI | GCAATG | 3 cut(s) | 1835, 4131, 4495 |
| BseRI | GAGGAG | 4 cut(s) | 3587, 4377, 4854, 5078 |
| BseSI | GKGCMC | 4 cut(s) | 155, 3349, 4165, 5814 |
| BseYI | CCCAGC | 4 cut(s) | 962, 1466, 2402, 5132 |
| BsgI | GTGCAG | 6 cut(s) | 231, 1578, 3118, 3663, 4002, 5751 |
| Bsh1236I | CGCG | 7 cut(s) | 20, 46, 176, 2687, 3120, 3354, 4887 |
| Bsh1285I | CGRYCG | 1 cut(s) | 5348 |
| BshNI | GGYRCC | 4 cut(s) | 152, 818, 1216, 3008 |
| BsiEI | CGRYCG | 1 cut(s) | 5348 |
| BsiHKAI | GWGCWC | 6 cut(s) | 2684, 2792, 3349, 4165, 4967, 5814 |
| BsiHKCI | CYCGRG | 1 cut(s) | 5757 |
| BsiSI | CCGG | 6 cut(s) | 815, 1404, 4650, 4985, 5508, 5786 |
| BslFI | GGGAC | 3 cut(s) | 406, 4909, 5115 |
| BsmAI | GTCTC | 3 cut(s) | 1563, 2989, 5261 |
| BsmFI | GGGAC | 3 cut(s) | 406, 4909, 5115 |
| BsmI | GAATGC | 5 cut(s) | 1568, 4554, 4820, 5439, 5553 |
| BsoBI | CYCGRG | 1 cut(s) | 5757 |
| Bsp119I | TTCGAA | 2 cut(s) | 592, 4814 |
| Bsp13I | TCCGGA | 2 cut(s) | 1403, 4649 |
| Bsp1407I | TGTACA | 1 cut(s) | 3175 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2554 |
| Bsp19I | CCATGG | 3 cut(s) | 3031, 5195, 5567 |
| Bsp68I | TCGCGA | 1 cut(s) | 20 |
| BspEI | TCCGGA | 2 cut(s) | 1403, 4649 |
| BspFNI | CGCG | 7 cut(s) | 20, 46, 176, 2687, 3120, 3354, 4887 |
| BspHI | TCATGA | 3 cut(s) | 2179, 2605, 3916 |
| BspLI | GGNNCC | 8 cut(s) | 154, 250, 820, 1218, 1803, 3010, 3189, 4755 |
| BspMAI | CTGCAG | 1 cut(s) | 5773 |
| BspMI | ACCTGC | 2 cut(s) | 1579, 4073 |
| BspOI | GCTAGC | 1 cut(s) | 3161 |
| BspQI | GCTCTTC | 2 cut(s) | 4972, 5826 |
| BspT104I | TTCGAA | 2 cut(s) | 592, 4814 |
| BspT107I | GGYRCC | 4 cut(s) | 152, 818, 1216, 3008 |
| BspTI | CTTAAG | 3 cut(s) | 4523, 5219, 5426 |
| BsrDI | GCAATG | 3 cut(s) | 1835, 4131, 4495 |
| BsrGI | TGTACA | 1 cut(s) | 3175 |
| BssNI | GRCGYC | 1 cut(s) | 120 |
| BssSI | CACGAG | 1 cut(s) | 493 |
| Bst2BI | CACGAG | 1 cut(s) | 493 |
| Bst6I | CTCTTC | 9 cut(s) | 53, 2044, 2218, 3468, 4866, 4972, 5055, 5286, 5826 |
| BstACI | GRCGYC | 1 cut(s) | 120 |
| BstAFI | CTTAAG | 3 cut(s) | 4523, 5219, 5426 |
| BstAPI | GCANNNNNTGC | 6 cut(s) | 419, 431, 765, 5363, 5753, 5768 |
| BstAUI | TGTACA | 1 cut(s) | 3175 |
| BstBAI | YACGTR | 1 cut(s) | 505 |
| BstBI | TTCGAA | 2 cut(s) | 592, 4814 |
| BstC8I | GCNNGC | 6 cut(s) | 1038, 2464, 3027, 3097, 3159, 4641 |
| BstDSI | CCRYGG | 5 cut(s) | 8, 2281, 3031, 5195, 5567 |
| BstEII | GGTNACC | 1 cut(s) | 5841 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 374, 4112 |
| BstFNI | CGCG | 7 cut(s) | 20, 46, 176, 2687, 3120, 3354, 4887 |
| BstHHI | GCGC | 5 cut(s) | 178, 332, 1274, 5566, 5819 |
| BstMAI | GTCTC | 3 cut(s) | 1563, 2989, 5261 |
| BstMCI | CGRYCG | 1 cut(s) | 5348 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 5127 |
| BstPI | GGTNACC | 1 cut(s) | 5841 |
| BstSFI | CTRYAG | 4 cut(s) | 5125, 5213, 5616, 5769 |
| BstSLI | GKGCMC | 4 cut(s) | 155, 3349, 4165, 5814 |
| BstUI | CGCG | 7 cut(s) | 20, 46, 176, 2687, 3120, 3354, 4887 |
| BstV2I | GAAGAC | 3 cut(s) | 2109, 4461, 5324 |
| BstX2I | RGATCY | 9 cut(s) | 239, 1406, 2080, 2090, 2635, 3187, 3356, 3583, 4852 |
| BstYI | RGATCY | 9 cut(s) | 239, 1406, 2080, 2090, 2635, 3187, 3356, 3583, 4852 |
| Bsu36I | CCTNAGG | 1 cut(s) | 3618 |
| BtgI | CCRYGG | 5 cut(s) | 8, 2281, 3031, 5195, 5567 |
| BtgZI | GCGATG | 2 cut(s) | 50, 699 |
| BtrI | CACGTC | 1 cut(s) | 4514 |
| BtsI | GCAGTG | 5 cut(s) | 1371, 1763, 3972, 5263, 5812 |
| BtuMI | TCGCGA | 1 cut(s) | 20 |
| BveI | ACCTGC | 2 cut(s) | 1579, 4073 |
| Cac8I | GCNNGC | 6 cut(s) | 1038, 2464, 3027, 3097, 3159, 4641 |
| CaiI | CAGNNNCTG | 5 cut(s) | 1046, 1175, 3446, 4184, 5768 |
| CciI | TCATGA | 3 cut(s) | 2179, 2605, 3916 |
| CfoI | GCGC | 5 cut(s) | 178, 332, 1274, 5566, 5819 |
| Cfr13I | GGNCC | 7 cut(s) | 51, 2285, 2476, 2525, 3028, 4792, 5735 |
| CseI | GACGC | 2 cut(s) | 128, 1516 |
| CsiI | ACCWGGT | 1 cut(s) | 3539 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 3223, 3258 |
| DraIII | CACNNNGTG | 2 cut(s) | 818, 4160 |
| DriI | GACNNNNNGTC | 1 cut(s) | 3790 |
| EaeI | YGGCCR | 1 cut(s) | 5502 |
| Eam1104I | CTCTTC | 9 cut(s) | 53, 2044, 2218, 3468, 4866, 4972, 5055, 5286, 5826 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 3790 |
| EarI | CTCTTC | 9 cut(s) | 53, 2044, 2218, 3468, 4866, 4972, 5055, 5286, 5826 |
| EciI | GGCGGA | 3 cut(s) | 44, 1410, 2449 |
| Ecl136II | GAGCTC | 3 cut(s) | 2682, 2790, 4965 |
| Eco24I | GRGCYC | 6 cut(s) | 2684, 2792, 3137, 3405, 3453, 4967 |
| Eco47I | GGWCC | 2 cut(s) | 4792, 5735 |
| Eco53kI | GAGCTC | 3 cut(s) | 2682, 2790, 4965 |
| Eco57I | CTGAAG | 7 cut(s) | 648, 1833, 2601, 3423, 4206, 4440, 5815 |
| Eco81I | CCTNAGG | 1 cut(s) | 3618 |
| Eco88I | CYCGRG | 1 cut(s) | 5757 |
| Eco91I | GGTNACC | 1 cut(s) | 5841 |
| EcoICRI | GAGCTC | 3 cut(s) | 2682, 2790, 4965 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 374, 4112 |
| EcoO65I | GGTNACC | 1 cut(s) | 5841 |
| EcoRI | GAATTC | 2 cut(s) | 2650, 5634 |
| EcoT22I | ATGCAT | 2 cut(s) | 3145, 4042 |
| EcoT38I | GRGCYC | 6 cut(s) | 2684, 2792, 3137, 3405, 3453, 4967 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 868, 900, 4446, 4478, 4817, 4849 |
| FaqI | GGGAC | 3 cut(s) | 406, 4909, 5115 |
| FauI | CCCGC | 1 cut(s) | 5156 |
| FauNDI | CATATG | 2 cut(s) | 3463, 5515 |
| FbaI | TGATCA | 3 cut(s) | 3073, 4099, 4975 |
| FblI | GTMKAC | 1 cut(s) | 2707 |
| FriOI | GRGCYC | 6 cut(s) | 2684, 2792, 3137, 3405, 3453, 4967 |
| FspI | TGCGCA | 1 cut(s) | 331 |
| GlaI | GCGC | 5 cut(s) | 177, 331, 1273, 5565, 5818 |
| GsaI | CCCAGC | 4 cut(s) | 966, 1470, 2406, 5136 |
| GsuI | CTGGAG | 3 cut(s) | 329, 3136, 4259 |
| HapII | CCGG | 6 cut(s) | 815, 1404, 4650, 4985, 5508, 5786 |
| HgaI | GACGC | 2 cut(s) | 128, 1516 |
| HhaI | GCGC | 5 cut(s) | 178, 332, 1274, 5566, 5819 |
| Hin1I | GRCGYC | 1 cut(s) | 120 |
| Hin6I | GCGC | 5 cut(s) | 176, 330, 1272, 5564, 5817 |
| HinP1I | GCGC | 5 cut(s) | 176, 330, 1272, 5564, 5817 |
| HincII | GTYRAC | 1 cut(s) | 5122 |
| HindII | GTYRAC | 1 cut(s) | 5122 |
| HindIII | AAGCTT | 1 cut(s) | 3435 |
| HpaII | CCGG | 6 cut(s) | 815, 1404, 4650, 4985, 5508, 5786 |
| Hpy99I | CGWCG | 2 cut(s) | 122, 188 |
| HpyCH4IV | ACGT | 8 cut(s) | 183, 395, 504, 2335, 3212, 3805, 4513, 5598 |
| HpySE526I | ACGT | 8 cut(s) | 183, 395, 504, 2335, 3212, 3805, 4513, 5598 |
| Hsp92I | GRCGYC | 1 cut(s) | 120 |
| HspAI | GCGC | 5 cut(s) | 176, 330, 1272, 5564, 5817 |
| Kpn2I | TCCGGA | 2 cut(s) | 1403, 4649 |
| KpnI | GGTACC | 1 cut(s) | 1220 |
| Ksp22I | TGATCA | 3 cut(s) | 3073, 4099, 4975 |
| LguI | GCTCTTC | 2 cut(s) | 4972, 5826 |
| LmnI | GCTCC | 9 cut(s) | 254, 310, 710, 2577, 2687, 4743, 4759, 5532, 5723 |
| MabI | ACCWGGT | 1 cut(s) | 3539 |
| MaeII | ACGT | 8 cut(s) | 183, 395, 504, 2335, 3212, 3805, 4513, 5598 |
| MfeI | CAATTG | 6 cut(s) | 465, 683, 3237, 3965, 5394, 5448 |
| MflI | RGATCY | 9 cut(s) | 239, 1406, 2080, 2090, 2635, 3187, 3356, 3583, 4852 |
| MluI | ACGCGT | 1 cut(s) | 4885 |
| MlyI | GAGTC | 3 cut(s) | 2054, 4085, 5692 |
| MmeI | TCCRAC | 5 cut(s) | 1160, 4176, 4339, 5360, 5464 |
| Mph1103I | ATGCAT | 2 cut(s) | 3145, 4042 |
| MroI | TCCGGA | 2 cut(s) | 1403, 4649 |
| MroXI | GAANNNNTTC | 5 cut(s) | 795, 2092, 4552, 4820, 5467 |
| MslI | CAYNNNNRTG | 8 cut(s) | 453, 568, 1515, 2349, 3765, 3767, 4998, 5229 |
| MspA1I | CMGCKG | 3 cut(s) | 1385, 2947, 5774 |
| MspCI | CTTAAG | 3 cut(s) | 4523, 5219, 5426 |
| MspI | CCGG | 6 cut(s) | 815, 1404, 4650, 4985, 5508, 5786 |
| MunI | CAATTG | 6 cut(s) | 465, 683, 3237, 3965, 5394, 5448 |
| Mva1269I | GAATGC | 5 cut(s) | 1568, 4554, 4820, 5439, 5553 |
| MvnI | CGCG | 7 cut(s) | 20, 46, 176, 2687, 3120, 3354, 4887 |
| NciI | CCSGG | 3 cut(s) | 816, 4986, 5509 |
| NcoI | CCATGG | 3 cut(s) | 3031, 5195, 5567 |
| NdeI | CATATG | 2 cut(s) | 3463, 5515 |
| NheI | GCTAGC | 1 cut(s) | 3157 |
| NlaIV | GGNNCC | 8 cut(s) | 154, 250, 820, 1218, 1803, 3010, 3189, 4755 |
| NmeAIII | GCCGAG | 1 cut(s) | 1592 |
| NmuCI | GTSAC | 4 cut(s) | 404, 1194, 2518, 5841 |
| NruI | TCGCGA | 1 cut(s) | 20 |
| NsbI | TGCGCA | 1 cut(s) | 331 |
| NsiI | ATGCAT | 2 cut(s) | 3145, 4042 |
| NspV | TTCGAA | 2 cut(s) | 592, 4814 |
| PagI | TCATGA | 3 cut(s) | 2179, 2605, 3916 |
| PasI | CCCWGGG | 1 cut(s) | 389 |
| PciI | ACATGT | 4 cut(s) | 617, 1358, 2698, 3490 |
| PciSI | GCTCTTC | 2 cut(s) | 4972, 5826 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 32, 180 |
| PctI | GAATGC | 5 cut(s) | 1568, 4554, 4820, 5439, 5553 |
| PdmI | GAANNNNTTC | 5 cut(s) | 795, 2092, 4552, 4820, 5467 |
| PflFI | GACNNNGTC | 1 cut(s) | 2113 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1124 |
| PleI | GAGTC | 3 cut(s) | 2053, 4084, 5692 |
| PpsI | GAGTC | 3 cut(s) | 2053, 4084, 5692 |
| Ppu21I | YACGTR | 1 cut(s) | 505 |
| PscI | ACATGT | 4 cut(s) | 617, 1358, 2698, 3490 |
| PshAI | GACNNNNGTC | 1 cut(s) | 5127 |
| Psp124BI | GAGCTC | 3 cut(s) | 2684, 2792, 4967 |
| Psp1406I | AACGTT | 1 cut(s) | 5598 |
| PspEI | GGTNACC | 1 cut(s) | 5841 |
| PspFI | CCCAGC | 4 cut(s) | 962, 1466, 2402, 5132 |
| PspN4I | GGNNCC | 8 cut(s) | 154, 250, 820, 1218, 1803, 3010, 3189, 4755 |
| PspPI | GGNCC | 7 cut(s) | 51, 2285, 2476, 2525, 3028, 4792, 5735 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 5175, 5207 |
| PstI | CTGCAG | 1 cut(s) | 5773 |
| PstNI | CAGNNNCTG | 5 cut(s) | 1046, 1175, 3446, 4184, 5768 |
| PsuI | RGATCY | 9 cut(s) | 239, 1406, 2080, 2090, 2635, 3187, 3356, 3583, 4852 |
| PsyI | GACNNNGTC | 1 cut(s) | 2113 |
| PvuII | CAGCTG | 3 cut(s) | 1385, 2947, 5774 |
| RruI | TCGCGA | 1 cut(s) | 20 |
| RseI | CAYNNNNRTG | 8 cut(s) | 453, 568, 1515, 2349, 3765, 3767, 4998, 5229 |
| SacI | GAGCTC | 3 cut(s) | 2684, 2792, 4967 |
| SapI | GCTCTTC | 2 cut(s) | 4972, 5826 |
| Sau96I | GGNCC | 7 cut(s) | 51, 2285, 2476, 2525, 3028, 4792, 5735 |
| ScaI | AGTACT | 1 cut(s) | 1888 |
| SchI | GAGTC | 3 cut(s) | 2054, 4085, 5692 |
| SexAI | ACCWGGT | 1 cut(s) | 3539 |
| SfcI | CTRYAG | 4 cut(s) | 5125, 5213, 5616, 5769 |
| SfuI | TTCGAA | 2 cut(s) | 592, 4814 |
| SinI | GGWCC | 2 cut(s) | 4792, 5735 |
| SmiMI | CAYNNNNRTG | 8 cut(s) | 453, 568, 1515, 2349, 3765, 3767, 4998, 5229 |
| SmlI | CTYRAG | 9 cut(s) | 719, 1651, 2237, 2677, 2785, 3410, 4523, 5219, 5426 |
| SmoI | CTYRAG | 9 cut(s) | 719, 1651, 2237, 2677, 2785, 3410, 4523, 5219, 5426 |
| SspI | AATATT | 5 cut(s) | 834, 1705, 2992, 5322, 5540 |
| SstI | GAGCTC | 3 cut(s) | 2684, 2792, 4967 |
| TaiI | ACGT | 8 cut(s) | 186, 398, 507, 2338, 3215, 3808, 4516, 5601 |
| TaqII | GACCGA | 2 cut(s) | 4809, 5334 |
| TatI | WGTACW | 5 cut(s) | 1886, 3175, 3646, 4516, 5494 |
| TauI | GCSGC | 3 cut(s) | 3633, 4958, 5507 |
| TseFI | GTSAC | 4 cut(s) | 404, 1194, 2518, 5841 |
| Tsp45I | GTSAC | 4 cut(s) | 404, 1194, 2518, 5841 |
| TspGWI | ACGGA | 3 cut(s) | 753, 3590, 5710 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2113 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1124 |
| Vha464I | CTTAAG | 3 cut(s) | 4523, 5219, 5426 |
| VneI | GTGCAC | 3 cut(s) | 3345, 4161, 5810 |
| VpaK11BI | GGWCC | 2 cut(s) | 4792, 5735 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 374, 4112 |
| XbaI | TCTAGA | 1 cut(s) | 4577 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 832, 3688, 5723 |
| XmaJI | CCTAGG | 1 cut(s) | 1552 |
| XmiI | GTMKAC | 1 cut(s) | 2707 |
| XmnI | GAANNNNTTC | 5 cut(s) | 795, 2092, 4552, 4820, 5467 |
| ZrmI | AGTACT | 1 cut(s) | 1888 |
| Zsp2I | ATGCAT | 2 cut(s) | 3145, 4042 |