Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0008285

Physical Location & Seq

Genomic Coordinates Reverse (-)

8697685 .. 8701052

Gene Structure 3368 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G24090.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2034 bp

ATGTGTGGAATCTTCGCGTATCTGAATTTTCACGCGAACAAAGAGAGACGATACATTCTCGATGTTCTCTTCAATGGTCTTCGTCGTCTTGAATACAGAGGCTACGATTCTGCTGGAATCGCCATTGATAATTCTTCTCCTTCTTCTTCTCCTCTCGTGTTTCGTCAAGCAGGAAACATTGAATCACTTGTTAATTCCGTTAACGAAGAGATTACGAATACGGATTTGAATCTAGACGAAGTTTTCTACTTTCATGCTGGAATTGCACATACGAGGTGGGCTACTCATGGTGAGCCAGCTCCAAGGAATAGTCATCCTCAATCTTCTGGTCCTGGAGATGATTTTTTGGTGGTTCATAATGGTGTTATCACTAACTATGAGGTATTGAAAGAAACGTTAGTGAGGCATGGATTTACTTTTGAATCGGACACAGATACTGAAGTAATTCCTAAGCTTGCTAAGTTTGTTTTTGACAAAGCTAATGAAGAAGGTGGACAAACTGTTACATTCTGTGAAGTTGTGTTTGAAGTGATGAGGCATCTTGAAGGAGCTTATGCTCTTATATTTAAAAGCTGGCATTATCCGAATGAGTTAATTGCGTGCAAGCTTGGTAGTCCATTGCTTTTAGGTGTTAAAGAGCTAGATCAAGGTGAGAGCAATAGTCATGTTTTCCAAGATGCTCACTTTCTATCTAAGAATGACCATCCCAAGGAGTTTTTCCTATCAAGTGATCCACATGCTCTTGTTGAGCACACAAAGAAAGTTTTGGTGATTGAAGATGGCGAAGTTGTCAATCTCAAGGATGGAGGTGTATCAATACTTAAGTTTGAAAATGAGAGGGGAAGGTGTAATGGTTTATCGAGACCTGCTTCAGTGGAACGTGCCTTATCTGTTCTAGAGATGGAGGTAGAGCAAATAAGCAAGGGAAAATATGATCATTACATGCAAAAGGAAATCCACGAGCAGCCAGAATCTTTAACTACTACAATGAGAGGCCGACTTATACGCGGTGGTTCACGTAAAACGAAAACCGTCCTCTTAGGTGGGCTGAAAGATCACCTAAAGACCATAAGACGCAGCCGGCGTATAGTTTTTATTGGATGTGGGACAAGTTACAATGCCGCTCTTGCATCAAGACCTATCCTTGAAGAACTCTCTGGTATACCAGTCAGTATGGAGATTGCTAGTGATCTATGGGACCGGCAAGGTCCAATATACAGAGAAGATACCGCGGTGTTTGTGAGTCAGTCTGGTGAAACTGCAGATACACTACTTGCTTTGGACTATGCTCGAGAAAACGGTGCATTATGTGTCGGCATAACTAACACCGTTGGGAGCTCCATAGCTAGAAAAACACACTGTGGTGTCCATATAAACGCAGGAGCTGAGATTGGTGTCGCAAGTACAAAGGCATATACAAGTCAGATTGTGGTAATGGTAATGCTAGCTTTAGCAATAGGAAGTGACACAATCTCCAGCCAAAAGAGACGGGAAGCTATAATCGATGGACTACTTGATTTGCCGTATAAGGTTAAGGAAGTACTAAAGCTAGACGATGAAATGAAAGATCTCGCGCAACTCTTGATAGACGAGCAGTCACTGCTAGTGTTTGGCAGAGGATACAACTACGCAACAGCTTTAGAAGGAGCATTAAAAGTAAAAGAAGTAGCACTTATGCACAGTGAAGGAATACTTGCAGGAGAAATGAAACATGGACCTTTAGCTTTGGTTGATGAGAATCTCCCCATAGCTGTGATTGCCACTCGTGATGCTTGTTTCAGTAAACAACAATCTGTGATTCAGCAACTTCACGCACGCAAAGGGAGACTAATAGTAATGTGCTCAAAAGGTGATGCTGCATCGGTAAGCTCGAGTGGTTCTTGTCGAGCTATCGAAGTTCCTCAAGTTGAAGATTGTTTACAACCTGTTATTAATATAGTGCCATTACAGTTGTTGGCTTATCATCTGACTGTTTTGAGAGGTCACAATGTTGATCAACCGAGGAATCTGGCAAAGAGTGTGACTACTCAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004360 GO:0006002 GO:0006040 GO:0006047 GO:0006139 GO:0006464 GO:0006486 GO:0006487 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008483 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009225 GO:0009987 GO:0016740 GO:0016769 GO:0019538 GO:0019637 GO:0034641 GO:0034645 GO:0036211 GO:0043170 GO:0043412 GO:0043413 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044281 GO:0046483 GO:0055086 GO:0070085 GO:0070548 GO:0071704 GO:1901135 GO:1901137 GO:1901360 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00250 ko00520 ko01100 ko01130 ko04931 map00250 map00520 map01100 map01130 map04931

Pfam Domains

Protein Families

GATase_6 SIS

Protein Analysis

677

Amino Acids

74.6

Weight (kDa)

5.97

Isoelectric Point (pI)

42.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GATase_6	PF13522	86 - 188	5.3e-13	Glutamine amidotransferase domain
GATase_7	PF13537	104 - 189	7.4e-08	Glutamine amidotransferase domain
SIS	PF01380	357 - 485	8.3e-36	SIS domain
SIS	PF01380	528 - 659	1.7e-20	SIS domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008285)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G24090
fragaria_vesca	FvH4_6g00360 FvH4_6g00360
malus_domestica	MD04G1173900.v1.1 MD04G1246300.v1.1 MD12G1263800.v1.1
prunus_persica	Prupe.6G362600_v2.0.a1
pyrus_communis	pycom04g21700 pycom12g24000
rosa_chinensis	RchiOBHm_Chr3g0447661 RchiOBHm_Chr4g0412421
rosa_laevigata	RLG00000025980
rosa_multiflora	Rmu_ssc0000391.1_g000002
rosa_roxburghii	Rroxscaffold_6G00425870
rosa_rugosa	Rorug02G0604100 Rorug04G0077300 Rorug07G0328400
rosa_samantha	Rh3AG004100 Rh3BG003700 Rh3CG004000 Rh3DG004000 Rh4CG183700
rosa_wichuraiana	Rw3G000310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	874
AccBSI	CCGCTC	1 cut(s)	1124
AccI	GTMKAC	1 cut(s)	1162
AccII	CGCG	5 cut(s)	17, 35, 1008, 1232, 1574
AciI	CCGC	4 cut(s)	1008, 1122, 1230, 1232
AclI	AACGTT	1 cut(s)	395
AclWI	GGATC	1 cut(s)	725
AcsI	RAATTY	1 cut(s)	25
AcuI	CTGAAG	2 cut(s)	459, 855
AdeI	CACNNNGTG	1 cut(s)	1361
AfaI	GTAC	2 cut(s)	1405, 1542
AfiI	CCNNNNNNNGG	1 cut(s)	709
AflII	CTTAAG	1 cut(s)	821
AhdI	GACNNNNNGTC	1 cut(s)	1594
AjnI	CCWGG	1 cut(s)	331
AjuI	GAANNNNNNNTTGG	2 cut(s)	701, 733
AleI	CACNNNNGTG	1 cut(s)	1362
Alw21I	GWGCWC	3 cut(s)	753, 1340, 1844
Alw26I	GTCTC	4 cut(s)	40, 856, 1480, 1819
AlwI	GGATC	1 cut(s)	725
AlwNI	CAGNNNCTG	3 cut(s)	437, 1385, 1600
Ama87I	CYCGRG	2 cut(s)	1290, 1870
AoxI	GGCC	1 cut(s)	994
ApeKI	GCWGC	3 cut(s)	964, 1077, 1856
ApoI	RAATTY	1 cut(s)	25
AseI	ATTAAT	1 cut(s)	1932
Asp700I	GAANNNNTTC	1 cut(s)	444
AspLEI	GCGC	1 cut(s)	1576
AspS9I	GGNCC	4 cut(s)	329, 1198, 1208, 1715
AsuHPI	GGTGA	6 cut(s)	302, 662, 781, 1049, 1265, 1862
AsuNHI	GCTAGC	1 cut(s)	1444
AvaI	CYCGRG	2 cut(s)	1290, 1870
AvaII	GGWCC	4 cut(s)	329, 1198, 1208, 1715
BaeI	ACNNNNGTAYC	4 cut(s)	426, 459, 1218, 1251
BanII	GRGCYC	1 cut(s)	1340
BarI	GAAGNNNNNNTAC	2 cut(s)	1902, 1934
BauI	CACGAG	3 cut(s)	155, 959, 1764
BbsI	GAAGAC	1 cut(s)	71
Bbv12I	GWGCWC	3 cut(s)	753, 1340, 1844
BbvI	GCAGC	3 cut(s)	976, 1089, 1843
BccI	CCATC	5 cut(s)	711, 773, 797, 895, 1499
BceAI	ACGGC	1 cut(s)	1507
BciT130I	CCWGG	1 cut(s)	333
BciVI	GTATCC	1 cut(s)	1613
BclI	TGATCA	2 cut(s)	934, 1993
BcoDI	GTCTC	4 cut(s)	40, 856, 1480, 1819
BfaI	CTAG	8 cut(s)	233, 641, 896, 1185, 1347, 1445, 1550, 1604
BfmI	CTRYAG	1 cut(s)	1260
BfrI	CTTAAG	1 cut(s)	821
BfuAI	ACCTGC	1 cut(s)	874
BfuI	GTATCC	1 cut(s)	1613
BglII	AGATCT	1 cut(s)	1567
BisI	GCNGC	4 cut(s)	965, 1078, 1122, 1857
BlsI	GCNGC	4 cut(s)	966, 1079, 1123, 1858
BmcAI	AGTACT	1 cut(s)	1542
Bme1390I	CCNGG	1 cut(s)	333
Bme18I	GGWCC	4 cut(s)	329, 1198, 1208, 1715
BmeRI	GACNNNNNGTC	1 cut(s)	1594
BmeT110I	CYCGRG	2 cut(s)	1290, 1870
BmgT120I	GGNCC	4 cut(s)	329, 1198, 1208, 1715
BmiI	GGNNCC	1 cut(s)	1199
BmrFI	CCNGG	1 cut(s)	333
BmsI	GCATC	6 cut(s)	547, 667, 1139, 1759, 1843, 1868
BmtI	GCTAGC	1 cut(s)	1448
BpiI	GAAGAC	1 cut(s)	71
BpmI	CTGGAG	2 cut(s)	354, 1459
Bpu10I	CCTNAGC	1 cut(s)	450
BpuEI	CTTGAG	2 cut(s)	782, 1887
Bsa29I	ATCGAT	1 cut(s)	1503
BsaAI	YACGTR	1 cut(s)	1019
BsaBI	GATNNNNATC	2 cut(s)	228, 1737
BsaI	GGTCTC	1 cut(s)	856
BsaJI	CCNNGG	4 cut(s)	302, 708, 1230, 2000
BsaXI	ACNNNNNCTCC	2 cut(s)	1457, 1487
Bsc4I	CCNNNNNNNGG	1 cut(s)	709
Bse118I	RCCGGY	2 cut(s)	1080, 1200
Bse1I	ACTGG	1 cut(s)	1166
Bse3DI	GCAATG	1 cut(s)	617
Bse8I	GATNNNNATC	2 cut(s)	228, 1737
BseBI	CCWGG	1 cut(s)	333
BseCI	ATCGAT	1 cut(s)	1503
BseDI	CCNNGG	4 cut(s)	302, 708, 1230, 2000
BseGI	GGATG	4 cut(s)	313, 703, 808, 1106
BseJI	GATNNNNATC	2 cut(s)	228, 1737
BseLI	CCNNNNNNNGG	1 cut(s)	709
BseMI	GCAATG	1 cut(s)	617
BseMII	CTCAG	1 cut(s)	1377
BseNI	ACTGG	1 cut(s)	1166
BseRI	GAGGAG	1 cut(s)	141
BseXI	GCAGC	3 cut(s)	976, 1089, 1843
Bsh1236I	CGCG	5 cut(s)	17, 35, 1008, 1232, 1574
BshFI	GGCC	1 cut(s)	996
BshVI	ATCGAT	1 cut(s)	1503
BsiHKAI	GWGCWC	3 cut(s)	753, 1340, 1844
BsiHKCI	CYCGRG	2 cut(s)	1290, 1870
BsiSI	CCGG	2 cut(s)	1081, 1201
BslFI	GGGAC	2 cut(s)	1120, 1211
BslI	CCNNNNNNNGG	1 cut(s)	709
BsmAI	GTCTC	4 cut(s)	40, 856, 1480, 1819
BsmBI	CGTCTC	2 cut(s)	40, 1480
BsmFI	GGGAC	2 cut(s)	1120, 1211
BsnI	GGCC	1 cut(s)	996
Bso31I	GGTCTC	1 cut(s)	856
BsoBI	CYCGRG	2 cut(s)	1290, 1870
Bsp1286I	GDGCHC	3 cut(s)	753, 1340, 1844
Bsp143I	GATC	7 cut(s)	643, 730, 934, 1054, 1189, 1567, 1993
BspACI	CCGC	4 cut(s)	1008, 1122, 1230, 1232
BspANI	GGCC	1 cut(s)	996
BspCNI	CTCAG	1 cut(s)	1378
BspDI	ATCGAT	1 cut(s)	1503
BspFNI	CGCG	5 cut(s)	17, 35, 1008, 1232, 1574
BspLI	GGNNCC	1 cut(s)	1199
BspMAI	CTGCAG	1 cut(s)	1264
BspMI	ACCTGC	1 cut(s)	874
BspOI	GCTAGC	1 cut(s)	1448
BspPI	GGATC	1 cut(s)	725
BspTI	CTTAAG	1 cut(s)	821
BspTNI	GGTCTC	1 cut(s)	856
BsrBI	CCGCTC	1 cut(s)	1124
BsrDI	GCAATG	1 cut(s)	617
BsrFI	RCCGGY	2 cut(s)	1080, 1200
BsrI	ACTGG	1 cut(s)	1166
BssAI	RCCGGY	2 cut(s)	1080, 1200
BssECI	CCNNGG	4 cut(s)	302, 708, 1230, 2000
BssMI	GATC	7 cut(s)	643, 730, 934, 1054, 1189, 1567, 1993
BssNAI	GTATAC	1 cut(s)	1163
BssSI	CACGAG	3 cut(s)	155, 959, 1764
BssT1I	CCWWGG	2 cut(s)	302, 708
Bst1107I	GTATAC	1 cut(s)	1163
Bst2BI	CACGAG	3 cut(s)	155, 959, 1764
Bst2UI	CCWGG	1 cut(s)	333
Bst4CI	ACNGT	8 cut(s)	502, 1033, 1301, 1330, 1361, 1682, 1950, 1972
Bst6I	CTCTTC	2 cut(s)	74, 201
BstAFI	CTTAAG	1 cut(s)	821
BstAPI	GCANNNNNTGC	1 cut(s)	1600
BstBAI	YACGTR	1 cut(s)	1019
BstC8I	GCNNGC	8 cut(s)	297, 456, 575, 601, 605, 1082, 1446, 1816
BstDEI	CTNAG	5 cut(s)	450, 459, 693, 1039, 1386
BstDSI	CCRYGG	1 cut(s)	1230
BstF5I	GGATG	4 cut(s)	313, 703, 808, 1106
BstFNI	CGCG	5 cut(s)	17, 35, 1008, 1232, 1574
BstHHI	GCGC	1 cut(s)	1576
BstKTI	GATC	7 cut(s)	646, 733, 937, 1057, 1192, 1570, 1996
BstMAI	GTCTC	4 cut(s)	40, 856, 1480, 1819
BstMBI	GATC	7 cut(s)	643, 730, 934, 1054, 1189, 1567, 1993
BstMWI	GCNNNNNNNGC	5 cut(s)	119, 263, 1127, 1600, 1757
BstNI	CCWGG	1 cut(s)	333
BstNSI	RCATGY	2 cut(s)	740, 946
BstSCI	CCNGG	1 cut(s)	331
BstSFI	CTRYAG	1 cut(s)	1260
BstUI	CGCG	5 cut(s)	17, 35, 1008, 1232, 1574
BstV1I	GCAGC	3 cut(s)	976, 1089, 1843
BstV2I	GAAGAC	1 cut(s)	71
BstX2I	RGATCY	1 cut(s)	1567
BstYI	RGATCY	1 cut(s)	1567
BstZ17I	GTATAC	1 cut(s)	1163
Bsu15I	ATCGAT	1 cut(s)	1503
BsuI	GTATCC	1 cut(s)	1613
BsuRI	GGCC	1 cut(s)	996
BsuTUI	ATCGAT	1 cut(s)	1503
BtgI	CCRYGG	1 cut(s)	1230
BtsCI	GGATG	4 cut(s)	313, 703, 808, 1106
BtsI	GCAGTG	1 cut(s)	1598
BtsIMutI	CAGTG	4 cut(s)	879, 1357, 1598, 1687
BveI	ACCTGC	1 cut(s)	874
Cac8I	GCNNGC	8 cut(s)	297, 456, 575, 601, 605, 1082, 1446, 1816
CaiI	CAGNNNCTG	3 cut(s)	437, 1385, 1600
CfoI	GCGC	1 cut(s)	1576
Cfr10I	RCCGGY	2 cut(s)	1080, 1200
Cfr13I	GGNCC	4 cut(s)	329, 1198, 1208, 1715
Cfr42I	CCGCGG	1 cut(s)	1233
ClaI	ATCGAT	1 cut(s)	1503
CseI	GACGC	1 cut(s)	1083
Csp6I	GTAC	2 cut(s)	1404, 1541
CviAII	CATG	7 cut(s)	254, 287, 407, 665, 737, 943, 1712
CviQI	GTAC	2 cut(s)	1404, 1541
DdeI	CTNAG	5 cut(s)	450, 459, 693, 1039, 1386
DpnI	GATC	7 cut(s)	645, 732, 936, 1056, 1191, 1569, 1995
DpnII	GATC	7 cut(s)	643, 730, 934, 1054, 1189, 1567, 1993
DraI	TTTAAA	1 cut(s)	568
DraIII	CACNNNGTG	1 cut(s)	1361
DriI	GACNNNNNGTC	1 cut(s)	1594
Eam1104I	CTCTTC	2 cut(s)	74, 201
Eam1105I	GACNNNNNGTC	1 cut(s)	1594
EarI	CTCTTC	2 cut(s)	74, 201
Ecl136II	GAGCTC	1 cut(s)	1338
Eco130I	CCWWGG	2 cut(s)	302, 708
Eco24I	GRGCYC	1 cut(s)	1340
Eco31I	GGTCTC	1 cut(s)	856
Eco47I	GGWCC	4 cut(s)	329, 1198, 1208, 1715
Eco53kI	GAGCTC	1 cut(s)	1338
Eco57I	CTGAAG	2 cut(s)	459, 855
Eco88I	CYCGRG	2 cut(s)	1290, 1870
EcoICRI	GAGCTC	1 cut(s)	1338
EcoRII	CCWGG	1 cut(s)	331
EcoT14I	CCWWGG	2 cut(s)	302, 708
EcoT38I	GRGCYC	1 cut(s)	1340
ErhI	CCWWGG	2 cut(s)	302, 708
Esp3I	CGTCTC	2 cut(s)	40, 1480
FaeI	CATG	7 cut(s)	257, 290, 410, 668, 740, 946, 1715
FalI	AAGNNNNNCTT	4 cut(s)	1656, 1688, 1677, 1709
FaqI	GGGAC	2 cut(s)	1120, 1211
FatI	CATG	7 cut(s)	253, 286, 406, 664, 736, 942, 1711
FbaI	TGATCA	2 cut(s)	934, 1993
FblI	GTMKAC	1 cut(s)	1162
Fnu4HI	GCNGC	4 cut(s)	965, 1078, 1122, 1857
FokI	GGATG	4 cut(s)	300, 690, 815, 1113
FriOI	GRGCYC	1 cut(s)	1340
Fsp4HI	GCNGC	4 cut(s)	965, 1078, 1122, 1857
FspBI	CTAG	8 cut(s)	233, 641, 896, 1185, 1347, 1445, 1550, 1604
GlaI	GCGC	1 cut(s)	1575
GluI	GCNGC	4 cut(s)	965, 1078, 1122, 1857
GsuI	CTGGAG	2 cut(s)	354, 1459
HaeIII	GGCC	1 cut(s)	996
HapII	CCGG	2 cut(s)	1081, 1201
HgaI	GACGC	1 cut(s)	1083
HhaI	GCGC	1 cut(s)	1576
Hin1II	CATG	7 cut(s)	257, 290, 410, 668, 740, 946, 1715
Hin6I	GCGC	1 cut(s)	1574
HinP1I	GCGC	1 cut(s)	1574
HincII	GTYRAC	1 cut(s)	202
HindII	GTYRAC	1 cut(s)	202
HindIII	AAGCTT	2 cut(s)	452, 605
HpaI	GTTAAC	1 cut(s)	202
HpaII	CCGG	2 cut(s)	1081, 1201
HphI	GGTGA	6 cut(s)	302, 662, 781, 1049, 1265, 1862
Hpy166II	GTNNAC	6 cut(s)	202, 494, 1016, 1163, 1784, 1919
Hpy188I	TCNGA	5 cut(s)	24, 427, 585, 1425, 1968
Hpy8I	GTNNAC	6 cut(s)	202, 494, 1016, 1163, 1784, 1919
Hpy99I	CGWCG	1 cut(s)	87
HpyAV	CCTTC	6 cut(s)	150, 482, 539, 837, 1637, 1679
HpyCH4III	ACNGT	8 cut(s)	502, 1033, 1301, 1330, 1361, 1682, 1950, 1972
HpyCH4IV	ACGT	3 cut(s)	395, 880, 1018
HpyCH4V	TGCA	9 cut(s)	266, 603, 946, 1130, 1262, 1304, 1678, 1697, 1859
HpyF10VI	GCNNNNNNNGC	5 cut(s)	119, 263, 1127, 1600, 1757
HpyF3I	CTNAG	5 cut(s)	450, 459, 693, 1039, 1386
HpySE526I	ACGT	3 cut(s)	395, 880, 1018
Hsp92II	CATG	7 cut(s)	257, 290, 410, 668, 740, 946, 1715
HspAI	GCGC	1 cut(s)	1574
KroI	GCCGGC	1 cut(s)	1080
KroNI	GCCGGC	1 cut(s)	1082
Ksp22I	TGATCA	2 cut(s)	934, 1993
KspAI	GTTAAC	1 cut(s)	202
KspI	CCGCGG	1 cut(s)	1233
Kzo9I	GATC	7 cut(s)	643, 730, 934, 1054, 1189, 1567, 1993
LmnI	GCTCC	6 cut(s)	304, 548, 1335, 1343, 1382, 1646
Lsp1109I	GCAGC	3 cut(s)	976, 1089, 1843
LweI	GCATC	6 cut(s)	547, 667, 1139, 1759, 1843, 1868
MaeI	CTAG	8 cut(s)	233, 641, 896, 1185, 1347, 1445, 1550, 1604
MaeII	ACGT	3 cut(s)	395, 880, 1018
MaeIII	GTNAC	6 cut(s)	502, 1112, 1463, 1596, 1982, 2020
MalI	GATC	7 cut(s)	645, 732, 936, 1056, 1191, 1569, 1995
MbiI	CCGCTC	1 cut(s)	1124
MboI	GATC	7 cut(s)	643, 730, 934, 1054, 1189, 1567, 1993
MflI	RGATCY	1 cut(s)	1567
MhlI	GDGCHC	3 cut(s)	753, 1340, 1844
MluCI	AATT	6 cut(s)	25, 130, 193, 261, 444, 594
MlyI	GAGTC	1 cut(s)	1252
MroNI	GCCGGC	1 cut(s)	1080
MroXI	GAANNNNTTC	1 cut(s)	444
MslI	CAYNNNNRTG	3 cut(s)	360, 1362, 1751
MspA1I	CMGCKG	1 cut(s)	1232
MspCI	CTTAAG	1 cut(s)	821
MspI	CCGG	2 cut(s)	1081, 1201
MspR9I	CCNGG	1 cut(s)	333
MvaI	CCWGG	1 cut(s)	333
MvnI	CGCG	5 cut(s)	17, 35, 1008, 1232, 1574
MwoI	GCNNNNNNNGC	5 cut(s)	119, 263, 1127, 1600, 1757
NaeI	GCCGGC	1 cut(s)	1082
NdeII	GATC	7 cut(s)	643, 730, 934, 1054, 1189, 1567, 1993
NgoMIV	GCCGGC	1 cut(s)	1080
NheI	GCTAGC	1 cut(s)	1444
NlaIII	CATG	7 cut(s)	257, 290, 410, 668, 740, 946, 1715
NlaIV	GGNNCC	1 cut(s)	1199
NmuCI	GTSAC	4 cut(s)	1463, 1596, 1982, 2020
NspI	RCATGY	2 cut(s)	740, 946
OliI	CACNNNNGTG	1 cut(s)	1362
PaeR7I	CTCGAG	2 cut(s)	1290, 1870
PcsI	WCGNNNNNNNCGW	2 cut(s)	1081, 1868
PdiI	GCCGGC	1 cut(s)	1082
PdmI	GAANNNNTTC	1 cut(s)	444
PfoI	TCCNGGA	1 cut(s)	331
PkrI	GCNGC	4 cut(s)	966, 1079, 1123, 1858
PleI	GAGTC	1 cut(s)	1251
PpsI	GAGTC	1 cut(s)	1251
Ppu21I	YACGTR	1 cut(s)	1019
PshBI	ATTAAT	1 cut(s)	1932
Psp124BI	GAGCTC	1 cut(s)	1340
Psp1406I	AACGTT	1 cut(s)	395
Psp6I	CCWGG	1 cut(s)	331
PspGI	CCWGG	1 cut(s)	331
PspN4I	GGNNCC	1 cut(s)	1199
PspPI	GGNCC	4 cut(s)	329, 1198, 1208, 1715
PspXI	VCTCGAGB	1 cut(s)	1870
PstI	CTGCAG	1 cut(s)	1264
PstNI	CAGNNNCTG	3 cut(s)	437, 1385, 1600
PsuI	RGATCY	1 cut(s)	1567
RsaI	GTAC	2 cut(s)	1405, 1542
RsaNI	GTAC	2 cut(s)	1404, 1541
RseI	CAYNNNNRTG	3 cut(s)	360, 1362, 1751
SacI	GAGCTC	1 cut(s)	1340
SacII	CCGCGG	1 cut(s)	1233
SatI	GCNGC	4 cut(s)	965, 1078, 1122, 1857
Sau3AI	GATC	7 cut(s)	643, 730, 934, 1054, 1189, 1567, 1993
Sau96I	GGNCC	4 cut(s)	329, 1198, 1208, 1715
ScaI	AGTACT	1 cut(s)	1542
SchI	GAGTC	1 cut(s)	1252
ScrFI	CCNGG	1 cut(s)	333
SduI	GDGCHC	3 cut(s)	753, 1340, 1844
SfaNI	GCATC	6 cut(s)	547, 667, 1139, 1759, 1843, 1868
SfcI	CTRYAG	1 cut(s)	1260
Sfr274I	CTCGAG	2 cut(s)	1290, 1870
Sfr303I	CCGCGG	1 cut(s)	1233
SgrBI	CCGCGG	1 cut(s)	1233
SinI	GGWCC	4 cut(s)	329, 1198, 1208, 1715
SlaI	CTCGAG	2 cut(s)	1290, 1870
SmiMI	CAYNNNNRTG	3 cut(s)	360, 1362, 1751
SmlI	CTYRAG	5 cut(s)	797, 821, 1290, 1870, 1902
SmoI	CTYRAG	5 cut(s)	797, 821, 1290, 1870, 1902
Sse9I	AATT	6 cut(s)	25, 130, 193, 261, 444, 594
SsiI	CCGC	4 cut(s)	1008, 1122, 1230, 1232
SspMI	CTAG	8 cut(s)	233, 641, 896, 1185, 1347, 1445, 1550, 1604
SstI	GAGCTC	1 cut(s)	1340
StyD4I	CCNGG	1 cut(s)	331
StyI	CCWWGG	2 cut(s)	302, 708
TaaI	ACNGT	8 cut(s)	502, 1033, 1301, 1330, 1361, 1682, 1950, 1972
TaiI	ACGT	3 cut(s)	398, 883, 1021
TaqI	TCGA	7 cut(s)	60, 860, 1291, 1503, 1871, 1885, 1893
TasI	AATT	6 cut(s)	25, 130, 193, 261, 444, 594
TatI	WGTACW	2 cut(s)	1403, 1540
TauI	GCSGC	1 cut(s)	1124
TscAI	CASTG	4 cut(s)	879, 1364, 1605, 1687
TseFI	GTSAC	4 cut(s)	1463, 1596, 1982, 2020
TseI	GCWGC	3 cut(s)	964, 1077, 1856
Tsp45I	GTSAC	4 cut(s)	1463, 1596, 1982, 2020
TspDTI	ATGAA	6 cut(s)	242, 344, 498, 1572, 1577, 1721
TspGWI	ACGGA	2 cut(s)	187, 236
TspRI	CASTG	4 cut(s)	879, 1364, 1605, 1687
Vha464I	CTTAAG	1 cut(s)	821
VpaK11BI	GGWCC	4 cut(s)	329, 1198, 1208, 1715
VspI	ATTAAT	1 cut(s)	1932
XapI	RAATTY	1 cut(s)	25
XbaI	TCTAGA	2 cut(s)	232, 895
XceI	RCATGY	2 cut(s)	740, 946
XhoI	CTCGAG	2 cut(s)	1290, 1870
XmiI	GTMKAC	1 cut(s)	1162
XmnI	GAANNNNTTC	1 cut(s)	444
XspI	CTAG	8 cut(s)	233, 641, 896, 1185, 1347, 1445, 1550, 1604
ZrmI	AGTACT	1 cut(s)	1542

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.