Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0006485

Physical Location & Seq

Genomic Coordinates Reverse (-)

35921107 .. 35936964

Gene Structure 15858 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0328400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2583 bp

ATGAAAATGGGGAATGAGGATCACCATGAATCTCCAACCCCAACAAATGAAGGTGAGAGTTCTAAAGAACATATTATCCTGCATGGTGAGCTAGATTTATGGATTATAGAAGCTAAATCTCTTCCAAATATGGATTTACCTTCAGAAAGAATGAGAAAGTGTTTTACCATGTTTGGAACTTGCTCTGCTCCTTTTGGAAATCGGTCTACTACTAAAGCTCTTTCTGGAAAACGGCCTGCAACTATTACAAGTGACCCTTATGTTTCTGTTTGCCTAGCAGGAGCTACTGTAGCTCAGACTAGAGTAATTTCAAATAGTGAAAATCCTTCATGGGAAGAACATTTTTGTGTGCCTGTTGCTCACCCTATTATGAAGGTGGAGTTTCATGTTAAGGATAATGATGTTCTCGGAGCTGAACTTATTGGAGTAGTTGAGATATCTGTTGATAAAATCATTTCGGGAAATACAATTAATGATTGGTTTCCCATCATTGGTAATCCTGGAAATTGCTTGAAACCTTTTCCTGAATTGCATGTTTCTGTTCAGTTTAAGCCAGTTGAAAACAACCCTCTATATAAGAATGGTGTTGGTGTCGGGCCAGAATATAAAGGAGTTCCTAATACATATTTTCCACTTCGCAAAGGAGGGAGTGTCACTTTATATCAAGATGCTCATGTACCTAATGATATGTTACCTGAAATTTTACTAGATGGTGGTACAGTTTTTCAGCAAAGAAAATGTTGGGAAGAAATATGTCACGCTATTTTGGAAGCTCAACATCTTATATATATTATAGGGTGGTCTGTATACCATCGTGTCAAGCTTGTAAGGGAACCAACAAAGCCACTACCCTCTGGAGGAGAAATGGAACTCGGAGAGTTGCTAAAATATAAGTCGCAAGAAGGGATCCGCGTTGTTTTGTTAATTTGGGATGATAAAACTTCGCACGACAAGTTTCTATTAAAAACAGAAGGTGTCATGGCAACACATGATGAGGAAACAAAAAAGTTTTTCAAACATTCTAGTGTTCATTGTGTGCTTTCTCCTCGTTATGCAAGCAATAAGCTTAGCATTTTCAAGCAACAGGTTGTGGGAACTCTTTTTACGCATCATCAGAAGTGTGTGATTCTTGACACAGCTTCTGGGAGTAACAGGAAAATAACTGCTTTCATTGGTGGTCTTGATTTATGTGATGGCCGATATGATACTCCTGAGCATAGACTATTTCGTGAACTTGACACAGTCTTTGAAAATGATATTCATAACCCTACATTTCCTACGAACACTTATGGCCCAAGAGAACCTTGGCACGATTTACACTGTAAAGTTGAGGGTCCTGCTGCATATGATATATTAACAAATTTTGAGCAAAGATGGAGAAAAGCGAAAAAACGTGACTTCAAACTGAAAAAAGTCACTAATAAGCATGATGATGCCTTGATAAGGTTAGATCGCGTCTCATGGATAGTCACTCCAACTTCTGATCATAATGGTGATGAAAAAGTGCGTGTTAGCAATGAAGAAGATCGTGAAAACTGGCATGTACAGGTATTCAGGTCAATAGATTCAGGCTCTGTGAAGGGGTTTCCAAAAGGTGTCCAAGATGCTGAGGTTCAGAATCTTATTTGCGGAAAGAATTTAAAAATTGACAAGAGTATCCATGTTGCATATATCAAGGCCATAAGATCAGCTCAACACTTTATATACATTGAAAATCAGTATTTTGTTGGATCTTCGTATTATTGGCCTACATACAAAAATGCAGGTGCAGATAACTTGGTCCCAATGGAATTAGCTCTGAAAATAGCTAGCAAAATCAAGGCAAATGAACGTTTCTCAGTGTATATAGTAATACCTATGTGGCCAGAAGGTGTTCCAACTACCTCATCTGTTCAAGAAATTTTATACTGGCAGGCACAAACAATGGGTATGATGTACAAGATTGTTACAAATGCCCTTAAAGAGGCAGGCCTTTCTGATCAGTATCATCCACAGGATTATTTGAACTTTTACTGTCTTGGTAAGCGTGAACCTCCATCTTCGAAAGGTACATCTGAAGCTAATCAGTCATTTGACAATCGTACCTTGGCATCAGCCCAAAAGTTCCGTCGGTTTATGATCTATGTTCATGCCAAAGGAATGATTGTTGATGATGAGTTTGTAATCATGGGTTCTGCAAATATTAACCAAAGATCAATGGATGGTTCAAGGGACACAGAAATTGCTATGGGTGCTTACCAACCACACCATACATGGGCAACTCTAAAAAATCTTCATCCACATGGCCAGGTATATGGTTACCGAATGTCTCTTTGGGCTGAGCACCTCGGTGGACTTGAGGATACTTTTAAAGACCCTCAAAGCCTTGAATGCACTAAGCGTGTTTGTGAGATTGCCAAACAAAACTGGAATCAATTTGTAGCCCAAGAGCATCGGGAGTTGAAGGGACACTTGATGCAATACCCAATTCAAATTGGTAGAGATGGAAATGTGTCTTCCATACCAGGAATTGAATCATTTCCTGATGTTGGTGGTAAAATTCTCGGGGCACCCACCAATCTTCCTGATGTTCTGACAACATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004553 GO:0004805 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006793 GO:0006796 GO:0006950 GO:0006970 GO:0006979 GO:0008150 GO:0008152 GO:0009507 GO:0009536 GO:0009628 GO:0009651 GO:0009987 GO:0015927 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0016798 GO:0019203 GO:0042578 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044424 GO:0044444 GO:0044464 GO:0050896

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 map00500 map01100

Pfam Domains

Protein Families

Trehalose_PPase

Protein Analysis

860

Amino Acids

97.28

Weight (kDa)

6.61

Isoelectric Point (pI)

32.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
C2	PF00168	30 - 162	1.8e-16	C2 domain
PLDc_2	PF13091	613 - 743	2.7e-08	PLD-like domain
PLDc	PF00614	707 - 732	4.2e-06	Phospholipase D Active site motif
PLD_C	PF12357	780 - 850	1.6e-27	Phospholipase D C terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006485)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G35910
fragaria_vesca	FvH4_3g04100 FvH4_3g04100 FvH4_3g04100 FvH4_3g04100 FvH4_5g37780 FvH4_5g37780 FvH4_5g37780 FvH4_5g37780
malus_domestica	MD08G1180400.v1.1 MD15G1365900.v1.1
prunus_persica	Prupe.1G513800_v2.0.a1
pyrus_communis	pycom08g15440 pycom15g32820
rosa_chinensis	RchiOBHm_Chr7g0239531
rosa_laevigata	RLG00000000747
rosa_multiflora	Rmu_sc0003379.1_g000024
rosa_roxburghii	Rroxscaffold_3G00220860
rosa_rugosa	Rorug07G0328400 Rorug07G0328400
rosa_samantha	Rh7AG482300 Rh7BG286700 Rh7BG455100 Rh7CG500000 Rh7DG468200
rosa_wichuraiana	Rw7G040390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1754
Acc36I	ACCTGC	1 cut(s)	1754
AccB1I	GGYRCC	1 cut(s)	2548
AccI	GTMKAC	2 cut(s)	206, 807
AccII	CGCG	2 cut(s)	912, 1455
AciI	CCGC	2 cut(s)	910, 1629
AclI	AACGTT	1 cut(s)	1831
AclWI	GGATC	4 cut(s)	27, 901, 914, 1738
AcoI	YGGCCR	3 cut(s)	1195, 1862, 2284
AcsI	RAATTY	5 cut(s)	699, 1360, 1636, 1899, 2538
AcuI	CTGAAG	2 cut(s)	126, 2076
AfaI	GTAC	6 cut(s)	678, 718, 1545, 1937, 2050, 2083
AfiI	CCNNNNNNNGG	6 cut(s)	491, 857, 1443, 1963, 2254, 2528
AjnI	CCWGG	3 cut(s)	499, 2286, 2503
AjuI	GAANNNNNNNTTGG	2 cut(s)	2296, 2328
AleI	CACNNNNGTG	1 cut(s)	2328
AloI	GAACNNNNNNTCC	2 cut(s)	60, 92
Alw21I	GWGCWC	1 cut(s)	2325
Alw26I	GTCTC	2 cut(s)	1462, 2313
AlwI	GGATC	4 cut(s)	27, 901, 914, 1738
AlwNI	CAGNNNCTG	2 cut(s)	1142, 1574
Ama87I	CYCGRG	1 cut(s)	2543
AoxI	GGCC	9 cut(s)	233, 596, 1195, 1291, 1677, 1745, 1862, 1969, 2284
ApeKI	GCWGC	1 cut(s)	1340
ApoI	RAATTY	5 cut(s)	699, 1360, 1636, 1899, 2538
ArsI	GACNNNNNNTTYG	4 cut(s)	1229, 1261, 2092, 2124
AseI	ATTAAT	1 cut(s)	471
Asp700I	GAANNNNTTC	2 cut(s)	1872, 2517
AspS9I	GGNCC	4 cut(s)	596, 1292, 1334, 1780
AsuHPI	GGTGA	5 cut(s)	14, 65, 98, 353, 1505
AsuII	TTCGAA	1 cut(s)	2042
AsuNHI	GCTAGC	1 cut(s)	1808
AvaI	CYCGRG	1 cut(s)	2543
AvaII	GGWCC	2 cut(s)	1334, 1780
BaeGI	GKGCMC	1 cut(s)	2551
BaeI	ACNNNNGTAYC	4 cut(s)	1639, 1672, 2065, 2098
BalI	TGGCCA	2 cut(s)	1864, 2286
BamHI	GGATCC	1 cut(s)	906
BanI	GGYRCC	1 cut(s)	2548
BbsI	GAAGAC	1 cut(s)	2487
Bbv12I	GWGCWC	1 cut(s)	2325
BbvCI	CCTCAGC	1 cut(s)	1608
BbvI	GCAGC	1 cut(s)	1327
BccI	CCATC	8 cut(s)	494, 704, 819, 1187, 1368, 2044, 2195, 2477
BceAI	ACGGC	1 cut(s)	248
BciT130I	CCWGG	3 cut(s)	501, 2288, 2505
BciVI	GTATCC	2 cut(s)	1667, 2335
BclI	TGATCA	2 cut(s)	1483, 1978
BcoDI	GTCTC	2 cut(s)	1462, 2313
BfaI	CTAG	6 cut(s)	92, 275, 300, 707, 1023, 1809
BfmI	CTRYAG	1 cut(s)	288
BfuAI	ACCTGC	1 cut(s)	1754
BfuI	GTATCC	2 cut(s)	1667, 2335
BisI	GCNGC	1 cut(s)	1341
BlpI	GCTNAGC	2 cut(s)	1067, 2319
BlsI	GCNGC	1 cut(s)	1342
Bme1390I	CCNGG	3 cut(s)	501, 2288, 2505
Bme18I	GGWCC	2 cut(s)	1334, 1780
BmeT110I	CYCGRG	1 cut(s)	2543
BmgT120I	GGNCC	4 cut(s)	596, 1292, 1334, 1780
BmiI	GGNNCC	5 cut(s)	834, 908, 1335, 1782, 2550
BmrFI	CCNGG	3 cut(s)	501, 2288, 2505
BmsI	GCATC	7 cut(s)	658, 1117, 1423, 1594, 2099, 2440, 2445
BmtI	GCTAGC	1 cut(s)	1812
BpiI	GAAGAC	1 cut(s)	2487
BpmI	CTGGAG	1 cut(s)	876
Bpu10I	CCTNAGC	2 cut(s)	1212, 1608
Bpu1102I	GCTNAGC	2 cut(s)	1067, 2319
Bpu14I	TTCGAA	1 cut(s)	2042
BpuEI	CTTGAG	1 cut(s)	2357
BsaBI	GATNNNNATC	1 cut(s)	1983
BsaJI	CCNNGG	3 cut(s)	1304, 2085, 2326
BsaXI	ACNNNNNCTCC	4 cut(s)	273, 303, 636, 666
Bsc4I	CCNNNNNNNGG	6 cut(s)	491, 857, 1443, 1963, 2254, 2528
Bse1I	ACTGG	4 cut(s)	554, 1541, 1913, 2411
Bse3DI	GCAATG	1 cut(s)	1522
Bse8I	GATNNNNATC	1 cut(s)	1983
BseBI	CCWGG	3 cut(s)	501, 2288, 2505
BseDI	CCNNGG	3 cut(s)	1304, 2085, 2326
BseGI	GGATG	4 cut(s)	937, 1987, 2206, 2275
BseJI	GATNNNNATC	1 cut(s)	1983
BseLI	CCNNNNNNNGG	6 cut(s)	491, 857, 1443, 1963, 2254, 2528
BseMI	GCAATG	1 cut(s)	1522
BseMII	CTCAG	5 cut(s)	308, 1203, 1599, 1851, 2310
BseNI	ACTGG	4 cut(s)	554, 1541, 1913, 2411
BseRI	GAGGAG	2 cut(s)	873, 1035
BseSI	GKGCMC	1 cut(s)	2551
BseXI	GCAGC	1 cut(s)	1327
BsgI	GTGCAG	1 cut(s)	1788
Bsh1236I	CGCG	2 cut(s)	912, 1455
BshFI	GGCC	9 cut(s)	235, 598, 1197, 1293, 1679, 1747, 1864, 1971, 2286
BshNI	GGYRCC	1 cut(s)	2548
BsiHKAI	GWGCWC	1 cut(s)	2325
BsiHKCI	CYCGRG	1 cut(s)	2543
BslFI	GGGAC	3 cut(s)	1766, 2225, 2460
BslI	CCNNNNNNNGG	6 cut(s)	491, 857, 1443, 1963, 2254, 2528
BsmAI	GTCTC	2 cut(s)	1462, 2313
BsmBI	CGTCTC	1 cut(s)	1462
BsmFI	GGGAC	3 cut(s)	1766, 2225, 2460
BsmI	GAATGC	1 cut(s)	2375
BsnI	GGCC	9 cut(s)	235, 598, 1197, 1293, 1679, 1747, 1864, 1971, 2286
BsoBI	CYCGRG	1 cut(s)	2543
Bsp119I	TTCGAA	1 cut(s)	2042
Bsp1286I	GDGCHC	2 cut(s)	2325, 2551
Bsp1407I	TGTACA	2 cut(s)	1543, 1935
Bsp1720I	GCTNAGC	2 cut(s)	1067, 2319
BspACI	CCGC	2 cut(s)	910, 1629
BspANI	GGCC	9 cut(s)	235, 598, 1197, 1293, 1679, 1747, 1864, 1971, 2286
BspCNI	CTCAG	5 cut(s)	307, 1204, 1600, 1850, 2311
BspFNI	CGCG	2 cut(s)	912, 1455
BspLI	GGNNCC	5 cut(s)	834, 908, 1335, 1782, 2550
BspMI	ACCTGC	1 cut(s)	1754
BspOI	GCTAGC	1 cut(s)	1812
BspPI	GGATC	4 cut(s)	27, 901, 914, 1738
BspT104I	TTCGAA	1 cut(s)	2042
BspT107I	GGYRCC	1 cut(s)	2548
BsrDI	GCAATG	1 cut(s)	1522
BsrGI	TGTACA	2 cut(s)	1543, 1935
BsrI	ACTGG	4 cut(s)	554, 1541, 1913, 2411
BssECI	CCNNGG	3 cut(s)	1304, 2085, 2326
BssNAI	GTATAC	1 cut(s)	808
BssT1I	CCWWGG	2 cut(s)	1304, 2085
Bst1107I	GTATAC	1 cut(s)	808
Bst2UI	CCWGG	3 cut(s)	501, 2288, 2505
Bst4CI	ACNGT	5 cut(s)	289, 721, 1243, 1322, 2015
Bst6I	CTCTTC	1 cut(s)	126
BstAUI	TGTACA	2 cut(s)	1543, 1935
BstBI	TTCGAA	1 cut(s)	2042
BstC8I	GCNNGC	5 cut(s)	237, 1057, 1810, 1914, 1969
BstDEI	CTNAG	7 cut(s)	294, 1067, 1212, 1608, 1837, 2319, 2376
BstEII	GGTNACC	1 cut(s)	2297
BstENI	CCTNNNNNAGG	2 cut(s)	1441, 1961
BstF5I	GGATG	4 cut(s)	937, 1987, 2206, 2275
BstFNI	CGCG	2 cut(s)	912, 1455
BstMAI	GTCTC	2 cut(s)	1462, 2313
BstMWI	GCNNNNNNNGC	4 cut(s)	88, 290, 2231, 2370
BstNI	CCWGG	3 cut(s)	501, 2288, 2505
BstNSI	RCATGY	2 cut(s)	536, 1544
BstPI	GGTNACC	1 cut(s)	2297
BstSCI	CCNGG	3 cut(s)	499, 2286, 2503
BstSFI	CTRYAG	1 cut(s)	288
BstSLI	GKGCMC	1 cut(s)	2551
BstUI	CGCG	2 cut(s)	912, 1455
BstV1I	GCAGC	1 cut(s)	1327
BstV2I	GAAGAC	1 cut(s)	2487
BstX2I	RGATCY	2 cut(s)	906, 1730
BstXI	CCANNNNNNTGG	1 cut(s)	2294
BstYI	RGATCY	2 cut(s)	906, 1730
BstZ17I	GTATAC	1 cut(s)	808
BsuI	GTATCC	2 cut(s)	1667, 2335
BsuRI	GGCC	9 cut(s)	235, 598, 1197, 1293, 1679, 1747, 1864, 1971, 2286
BtsCI	GGATG	4 cut(s)	937, 1987, 2206, 2275
BtsIMutI	CAGTG	2 cut(s)	1318, 1845
BveI	ACCTGC	1 cut(s)	1754
Cac8I	GCNNGC	5 cut(s)	237, 1057, 1810, 1914, 1969
CaiI	CAGNNNCTG	2 cut(s)	1142, 1574
Cfr13I	GGNCC	4 cut(s)	596, 1292, 1334, 1780
CseI	GACGC	1 cut(s)	1444
Csp6I	GTAC	6 cut(s)	677, 717, 1544, 1936, 2049, 2082
CviQI	GTAC	6 cut(s)	677, 717, 1544, 1936, 2049, 2082
DdeI	CTNAG	7 cut(s)	294, 1067, 1212, 1608, 1837, 2319, 2376
DraI	TTTAAA	2 cut(s)	1641, 2350
EaeI	YGGCCR	3 cut(s)	1195, 1862, 2284
Eam1104I	CTCTTC	1 cut(s)	126
EarI	CTCTTC	1 cut(s)	126
Eco130I	CCWWGG	2 cut(s)	1304, 2085
Eco147I	AGGCCT	1 cut(s)	1971
Eco32I	GATATC	1 cut(s)	438
Eco47I	GGWCC	2 cut(s)	1334, 1780
Eco57I	CTGAAG	2 cut(s)	126, 2076
Eco88I	CYCGRG	1 cut(s)	2543
Eco91I	GGTNACC	1 cut(s)	2297
EcoNI	CCTNNNNNAGG	2 cut(s)	1441, 1961
EcoO109I	RGGNCCY	1 cut(s)	1334
EcoO65I	GGTNACC	1 cut(s)	2297
EcoRII	CCWGG	3 cut(s)	499, 2286, 2503
EcoRV	GATATC	1 cut(s)	438
EcoT14I	CCWWGG	2 cut(s)	1304, 2085
ErhI	CCWWGG	2 cut(s)	1304, 2085
Esp3I	CGTCTC	1 cut(s)	1462
FalI	AAGNNNNNCTT	6 cut(s)	241, 273, 1288, 1320, 2435, 2467
FaqI	GGGAC	3 cut(s)	1766, 2225, 2460
FauNDI	CATATG	1 cut(s)	1345
FbaI	TGATCA	2 cut(s)	1483, 1978
FblI	GTMKAC	2 cut(s)	206, 807
Fnu4HI	GCNGC	1 cut(s)	1341
FokI	GGATG	4 cut(s)	944, 1974, 2213, 2262
Fsp4HI	GCNGC	1 cut(s)	1341
FspBI	CTAG	6 cut(s)	92, 275, 300, 707, 1023, 1809
GluI	GCNGC	1 cut(s)	1341
GsuI	CTGGAG	1 cut(s)	876
HaeIII	GGCC	9 cut(s)	235, 598, 1197, 1293, 1679, 1747, 1864, 1971, 2286
HgaI	GACGC	1 cut(s)	1444
HindIII	AAGCTT	2 cut(s)	821, 1064
HinfI	GANTC	6 cut(s)	29, 1126, 1565, 1618, 2410, 2513
HphI	GGTGA	5 cut(s)	14, 65, 98, 353, 1505
Hpy166II	GTNNAC	5 cut(s)	207, 808, 1232, 2030, 2333
Hpy8I	GTNNAC	5 cut(s)	207, 808, 1232, 2030, 2333
Hpy99I	CGWCG	1 cut(s)	2112
HpyAV	CCTTC	9 cut(s)	44, 150, 336, 367, 896, 965, 1573, 1862, 2437
HpyCH4III	ACNGT	5 cut(s)	289, 721, 1243, 1322, 2015
HpyCH4IV	ACGT	2 cut(s)	1393, 1831
HpyF10VI	GCNNNNNNNGC	4 cut(s)	88, 290, 2231, 2370
HpyF3I	CTNAG	7 cut(s)	294, 1067, 1212, 1608, 1837, 2319, 2376
HpySE526I	ACGT	2 cut(s)	1393, 1831
Ksp22I	TGATCA	2 cut(s)	1483, 1978
LmnI	GCTCC	3 cut(s)	193, 281, 410
Lsp1109I	GCAGC	1 cut(s)	1327
LweI	GCATC	7 cut(s)	658, 1117, 1423, 1594, 2099, 2440, 2445
MaeI	CTAG	6 cut(s)	92, 275, 300, 707, 1023, 1809
MaeII	ACGT	2 cut(s)	1393, 1831
MflI	RGATCY	2 cut(s)	906, 1730
MhlI	GDGCHC	2 cut(s)	2325, 2551
MlsI	TGGCCA	2 cut(s)	1864, 2286
MluNI	TGGCCA	2 cut(s)	1864, 2286
MmeI	TCCRAC	4 cut(s)	59, 1499, 1708, 1901
Mox20I	TGGCCA	2 cut(s)	1864, 2286
MroXI	GAANNNNTTC	2 cut(s)	1872, 2517
MscI	TGGCCA	2 cut(s)	1864, 2286
MslI	CAYNNNNRTG	6 cut(s)	345, 1023, 1431, 1491, 2280, 2328
Msp20I	TGGCCA	2 cut(s)	1864, 2286
MspR9I	CCNGG	3 cut(s)	501, 2288, 2505
Mva1269I	GAATGC	1 cut(s)	2375
MvaI	CCWGG	3 cut(s)	501, 2288, 2505
MvnI	CGCG	2 cut(s)	912, 1455
MwoI	GCNNNNNNNGC	4 cut(s)	88, 290, 2231, 2370
NdeI	CATATG	1 cut(s)	1345
NheI	GCTAGC	1 cut(s)	1808
NlaIV	GGNNCC	5 cut(s)	834, 908, 1335, 1782, 2550
NmuCI	GTSAC	6 cut(s)	251, 652, 755, 1394, 1414, 1468
NspI	RCATGY	2 cut(s)	536, 1544
NspV	TTCGAA	1 cut(s)	2042
OliI	CACNNNNGTG	1 cut(s)	2328
PaqCI	CACCTGC	1 cut(s)	1754
PceI	AGGCCT	1 cut(s)	1971
PctI	GAATGC	1 cut(s)	2375
PdmI	GAANNNNTTC	2 cut(s)	1872, 2517
PfeI	GAWTC	6 cut(s)	29, 1126, 1565, 1618, 2410, 2513
PflFI	GACNNNGTC	1 cut(s)	1241
PfoI	TCCNGGA	1 cut(s)	499
PkrI	GCNGC	1 cut(s)	1342
PpuMI	RGGWCCY	1 cut(s)	1334
PshBI	ATTAAT	1 cut(s)	471
Psp1406I	AACGTT	1 cut(s)	1831
Psp5II	RGGWCCY	1 cut(s)	1334
Psp6I	CCWGG	3 cut(s)	499, 2286, 2503
PspEI	GGTNACC	1 cut(s)	2297
PspGI	CCWGG	3 cut(s)	499, 2286, 2503
PspN4I	GGNNCC	5 cut(s)	834, 908, 1335, 1782, 2550
PspPI	GGNCC	4 cut(s)	596, 1292, 1334, 1780
PspPPI	RGGWCCY	1 cut(s)	1334
PsrI	GAACNNNNNNTAC	2 cut(s)	1087, 1119
PstNI	CAGNNNCTG	2 cut(s)	1142, 1574
PsuI	RGATCY	2 cut(s)	906, 1730
PsyI	GACNNNGTC	1 cut(s)	1241
RsaI	GTAC	6 cut(s)	678, 718, 1545, 1937, 2050, 2083
RsaNI	GTAC	6 cut(s)	677, 717, 1544, 1936, 2049, 2082
RseI	CAYNNNNRTG	6 cut(s)	345, 1023, 1431, 1491, 2280, 2328
SatI	GCNGC	1 cut(s)	1341
Sau96I	GGNCC	4 cut(s)	596, 1292, 1334, 1780
ScrFI	CCNGG	3 cut(s)	501, 2288, 2505
SduI	GDGCHC	2 cut(s)	2325, 2551
SfaNI	GCATC	7 cut(s)	658, 1117, 1423, 1594, 2099, 2440, 2445
SfcI	CTRYAG	1 cut(s)	288
SfuI	TTCGAA	1 cut(s)	2042
SinI	GGWCC	2 cut(s)	1334, 1780
SmiMI	CAYNNNNRTG	6 cut(s)	345, 1023, 1431, 1491, 2280, 2328
SmlI	CTYRAG	1 cut(s)	2336
SmoI	CTYRAG	1 cut(s)	2336
SseBI	AGGCCT	1 cut(s)	1971
SsiI	CCGC	2 cut(s)	910, 1629
SspI	AATATT	1 cut(s)	2182
SspMI	CTAG	6 cut(s)	92, 275, 300, 707, 1023, 1809
StuI	AGGCCT	1 cut(s)	1971
StyD4I	CCNGG	3 cut(s)	499, 2286, 2503
StyI	CCWWGG	2 cut(s)	1304, 2085
TaaI	ACNGT	5 cut(s)	289, 721, 1243, 1322, 2015
TaiI	ACGT	2 cut(s)	1396, 1834
TaqI	TCGA	1 cut(s)	2042
TaqII	GACCGA	1 cut(s)	192
TatI	WGTACW	2 cut(s)	1543, 1935
TfiI	GAWTC	6 cut(s)	29, 1126, 1565, 1618, 2410, 2513
TscAI	CASTG	2 cut(s)	1325, 1845
TseFI	GTSAC	6 cut(s)	251, 652, 755, 1394, 1414, 1468
TseI	GCWGC	1 cut(s)	1340
Tsp45I	GTSAC	6 cut(s)	251, 652, 755, 1394, 1414, 1468
TspGWI	ACGGA	1 cut(s)	2096
TspRI	CASTG	2 cut(s)	1325, 1845
Tth111I	GACNNNGTC	1 cut(s)	1241
VpaK11BI	GGWCC	2 cut(s)	1334, 1780
VspI	ATTAAT	1 cut(s)	471
XagI	CCTNNNNNAGG	2 cut(s)	1441, 1961
XapI	RAATTY	5 cut(s)	699, 1360, 1636, 1899, 2538
XceI	RCATGY	2 cut(s)	536, 1544
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1302, 2250
XmiI	GTMKAC	2 cut(s)	206, 807
XmnI	GAANNNNTTC	2 cut(s)	1872, 2517
XspI	CTAG	6 cut(s)	92, 275, 300, 707, 1023, 1809

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.