AT3G26935

Belongs to the DHHC palmitoyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0008943
Physical Location & Seq
Reverse (-)
9932526 .. 9935499
2974 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G26935.1

Sequence Viewer

Length: 1332 bp
ATGTATGTAGTGCCTCCGCCTCAGCGATCTGATTCTGGATCCAATGGTGATTTAAGGGTTTACCAAACTTGGAAAGGCAGCAATATATTCTTTCTTCAGGGAAGGTTTGTATTTGGGCCAGATGTTAGATCACTGGCGCTGACCATTTGTCTCATTGCTGTCCCTGTTACAATTTTCTGCATCTTTGTCGCAAGGAAGCTAATTGATGACTTCTCCGATAGCTGGGGAGTCTCAATAGTAGCTGTCGCCGTCGTGTTCACCATTTATGATTTAATTCTTCTGCTGCTTACATCCGGAAGAGATCCAGGTATTATCCCAAGAAATGCTCATCCTCCAGAGCCTGAAACCCTTGATGGAAACATGGATGCAGGGGCTGGCCAGACTCCGCAGCTGCGATTGCCTCGCATTAAGGAAGTACAGCTTAATGGAATCACATTTAAGGTCAAGTACTGTGACACTTGCATGCTCTATAGGCCGCCTCGCTGCTCGCATTGCTCAATTTGCAACAACTGCGTAGAAAGGTTTGACCATCACTGCCCTTGGGTCGGCCAATGTATTGGGATGAGGAACTACCGATTCTTCTTCATGTTCGTCTTCTCCACGACCCTTCTATGTATATATGTGTTTGCCTTCTGCTGGGTCTATATAAGAAAGATTATGGAATCAGAGCACACAACCACTTGGAAGGCAATGCTTAAAACTCCTGCCTCCATTGTTCTAATAATATACACATTCATATCAATGTGGTTTGTTGGTGGCTTAACAGTTTTCCATTTATATCTCATCAGCACGAACCAGACTACATACGAGAATTTCCGATACAGATATGATCGGCGAAGCAACCCACATAACAAGGGAGTGGTTAATAACTTCAAAGAAACATTTTTTTCCACAATCCCTCCTTCAAAGAACGACTTTAGAGCTATGGTCCAGCGTGAACCTCCATTACCTCCTAGATCTGTAGCAGGTGGTTTTATGAGTCCAAACATGGGTAAAGCCAATGATGAGATTGAAATGGGAAGGAAGGCTGTTTGGGCAGACATGGGTCCAGCAATGTCAGATCATGGTGACGGTAAACATGGTAACAATGAGCGGTTACATGTTAAGGACGGTGAGTTAGGCGAGCTATCTCCAGACATTAGGGCAACAGTTGATGAACAGAGTGATAGGCCAAGTATGCACCCGAGACGCTCAAGCTGGGGAAGGAAAAGCGGAAGCTGGGACATGTCACCAGAAGTTATGGCCTTAGCAGCCAGAGTAGGAGAACAAAACCAGAACGGCGGAGGTAGCAGCAGCGGAAGCGGTTTAGTGACGGAGAACCGGCCTACATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
ko04391 map04391
Pfam Domains
Protein Families
DHHC

Protein Analysis

443

Amino Acids

49.92

Weight (kDa)

8.66

Isoelectric Point (pI)

37.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DHHC PF01529 147 - 273 8e-41 DHHC palmitoyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 956
Acc36I ACCTGC 1 cut(s) 956
AccBSI CCGCTC 1 cut(s) 1093
AccIII TCCGGA 1 cut(s) 293
AciI CCGC 8 cut(s) 17, 386, 476, 1093, 1212, 1281, 1296, 1302
AclWI GGATC 3 cut(s) 33, 46, 296
AcoI YGGCCR 2 cut(s) 376, 547
AcsI RAATTY 1 cut(s) 811
AcuI CTGAAG 1 cut(s) 80
AfaI GTAC 2 cut(s) 417, 449
AfiI CCNNNNNNNGG 4 cut(s) 222, 545, 636, 989
AflIII ACRYGT 2 cut(s) 1099, 1224
AgsI TTSAA 3 cut(s) 874, 906, 1013
AhdI GACNNNNNGTC 1 cut(s) 147
AjnI CCWGG 1 cut(s) 304
AluBI AGCT 9 cut(s) 199, 222, 242, 391, 421, 923, 1126, 1197, 1218
AluI AGCT 9 cut(s) 199, 222, 242, 391, 421, 923, 1126, 1197, 1218
Alw21I GWGCWC 1 cut(s) 672
Alw26I GTCTC 3 cut(s) 155, 235, 1180
AlwI GGATC 3 cut(s) 33, 46, 296
AlwNI CAGNNNCTG 2 cut(s) 341, 374
Ama87I CYCGRG 1 cut(s) 1183
Aor13HI TCCGGA 1 cut(s) 293
AoxI GGCC 7 cut(s) 116, 376, 473, 547, 1169, 1242, 1322
ApeKI GCWGC 8 cut(s) 78, 283, 388, 391, 483, 1250, 1290, 1293
ApoI RAATTY 1 cut(s) 811
AspLEI GCGC 1 cut(s) 139
AspS9I GGNCC 3 cut(s) 116, 928, 1046
AsuHPI GGTGA 5 cut(s) 59, 250, 1079, 1124, 1221
AvaI CYCGRG 1 cut(s) 1183
AvaII GGWCC 2 cut(s) 928, 1046
BalI TGGCCA 1 cut(s) 378
BamHI GGATCC 1 cut(s) 38
BbsI GAAGAC 1 cut(s) 586
Bbv12I GWGCWC 1 cut(s) 672
BbvCI CCTCAGC 1 cut(s) 21
BbvI GCAGC 8 cut(s) 90, 270, 378, 400, 470, 1262, 1302, 1305
BccI CCATC 2 cut(s) 347, 537
BceAI ACGGC 2 cut(s) 233, 1294
BcgI CGANNNNNNTGC 2 cut(s) 169, 203
BciT130I CCWGG 1 cut(s) 306
BcoDI GTCTC 3 cut(s) 155, 235, 1180
BfaI CTAG 1 cut(s) 954
BfmI CTRYAG 2 cut(s) 469, 960
BfoI RGCGCY 1 cut(s) 140
BfuAI ACCTGC 1 cut(s) 956
BglII AGATCT 1 cut(s) 956
BisI GCNGC 9 cut(s) 79, 284, 389, 392, 476, 484, 1251, 1291, 1294
BlsI GCNGC 9 cut(s) 80, 285, 390, 393, 477, 485, 1252, 1292, 1295
BmcAI AGTACT 1 cut(s) 449
Bme1390I CCNGG 1 cut(s) 306
Bme18I GGWCC 2 cut(s) 928, 1046
BmeRI GACNNNNNGTC 1 cut(s) 147
BmeT110I CYCGRG 1 cut(s) 1183
BmgT120I GGNCC 3 cut(s) 116, 928, 1046
BmiI GGNNCC 2 cut(s) 40, 1047
BmrFI CCNGG 1 cut(s) 306
BmsI GCATC 2 cut(s) 189, 355
BoxI GACNNNNGTC 1 cut(s) 1044
BpiI GAAGAC 1 cut(s) 586
BpmI CTGGAG 2 cut(s) 318, 1116
Bpu10I CCTNAGC 2 cut(s) 21, 1246
BpuEI CTTGAG 1 cut(s) 1177
BsaJI CCNNGG 1 cut(s) 539
BsaWI WCCGGW 1 cut(s) 293
BsaXI ACNNNNNCTCC 2 cut(s) 883, 913
Bsc4I CCNNNNNNNGG 4 cut(s) 222, 545, 636, 989
Bse118I RCCGGY 1 cut(s) 1320
Bse1I ACTGG 1 cut(s) 138
Bse3DI GCAATG 4 cut(s) 153, 490, 696, 1059
BseAI TCCGGA 1 cut(s) 293
BseBI CCWGG 1 cut(s) 306
BseDI CCNNGG 1 cut(s) 539
BseGI GGATG 4 cut(s) 290, 328, 370, 567
BseLI CCNNNNNNNGG 4 cut(s) 222, 545, 636, 989
BseMI GCAATG 4 cut(s) 153, 490, 696, 1059
BseMII CTCAG 1 cut(s) 35
BseNI ACTGG 1 cut(s) 138
BseXI GCAGC 8 cut(s) 90, 270, 378, 400, 470, 1262, 1302, 1305
BseYI CCCAGC 4 cut(s) 222, 636, 1197, 1218
BshFI GGCC 7 cut(s) 118, 378, 475, 549, 1171, 1244, 1324
BsiHKAI GWGCWC 1 cut(s) 672
BsiHKCI CYCGRG 1 cut(s) 1183
BsiSI CCGG 2 cut(s) 294, 1321
BslFI GGGAC 2 cut(s) 146, 1235
BslI CCNNNNNNNGG 4 cut(s) 222, 545, 636, 989
BsmAI GTCTC 3 cut(s) 155, 235, 1180
BsmBI CGTCTC 1 cut(s) 1180
BsmFI GGGAC 2 cut(s) 146, 1235
BsnI GGCC 7 cut(s) 118, 378, 475, 549, 1171, 1244, 1324
BsoBI CYCGRG 1 cut(s) 1183
Bsp1286I GDGCHC 1 cut(s) 672
Bsp13I TCCGGA 1 cut(s) 293
Bsp143I GATC 7 cut(s) 26, 38, 128, 301, 829, 956, 1060
BspACI CCGC 8 cut(s) 17, 386, 476, 1093, 1212, 1281, 1296, 1302
BspANI GGCC 7 cut(s) 118, 378, 475, 549, 1171, 1244, 1324
BspCNI CTCAG 1 cut(s) 34
BspEI TCCGGA 1 cut(s) 293
BspLI GGNNCC 2 cut(s) 40, 1047
BspMI ACCTGC 1 cut(s) 956
BspPI GGATC 3 cut(s) 33, 46, 296
BsrBI CCGCTC 1 cut(s) 1093
BsrDI GCAATG 4 cut(s) 153, 490, 696, 1059
BsrFI RCCGGY 1 cut(s) 1320
BsrI ACTGG 1 cut(s) 138
BssAI RCCGGY 1 cut(s) 1320
BssECI CCNNGG 1 cut(s) 539
BssMI GATC 7 cut(s) 26, 38, 128, 301, 829, 956, 1060
BssT1I CCWWGG 1 cut(s) 539
Bst2UI CCWGG 1 cut(s) 306
Bst4CI ACNGT 5 cut(s) 452, 766, 1073, 1112, 1150
Bst6I CTCTTC 1 cut(s) 292
BstAPI GCANNNNNTGC 1 cut(s) 510
BstC8I GCNNGC 4 cut(s) 376, 464, 488, 1124
BstDEI CTNAG 2 cut(s) 21, 1246
BstF5I GGATG 4 cut(s) 290, 328, 370, 567
BstH2I RGCGCY 1 cut(s) 140
BstHHI GCGC 1 cut(s) 139
BstKTI GATC 7 cut(s) 29, 41, 131, 304, 832, 959, 1063
BstMAI GTCTC 3 cut(s) 155, 235, 1180
BstMBI GATC 7 cut(s) 26, 38, 128, 301, 829, 956, 1060
BstNI CCWGG 1 cut(s) 306
BstNSI RCATGY 3 cut(s) 466, 1103, 1228
BstPAI GACNNNNGTC 1 cut(s) 1044
BstSCI CCNGG 1 cut(s) 304
BstSFI CTRYAG 2 cut(s) 469, 960
BstV1I GCAGC 8 cut(s) 90, 270, 378, 400, 470, 1262, 1302, 1305
BstV2I GAAGAC 1 cut(s) 586
BstX2I RGATCY 3 cut(s) 38, 301, 956
BstXI CCANNNNNNTGG 1 cut(s) 557
BstYI RGATCY 3 cut(s) 38, 301, 956
BsuRI GGCC 7 cut(s) 118, 378, 475, 549, 1171, 1244, 1324
BtsCI GGATG 4 cut(s) 290, 328, 370, 567
BtsI GCAGTG 1 cut(s) 532
BtsIMutI CAGTG 2 cut(s) 131, 532
BveI ACCTGC 1 cut(s) 956
Cac8I GCNNGC 4 cut(s) 376, 464, 488, 1124
CaiI CAGNNNCTG 2 cut(s) 341, 374
CfoI GCGC 1 cut(s) 139
Cfr10I RCCGGY 1 cut(s) 1320
Cfr13I GGNCC 3 cut(s) 116, 928, 1046
CseI GACGC 1 cut(s) 1197
Csp6I GTAC 2 cut(s) 416, 448
CviAII CATG 9 cut(s) 361, 463, 586, 988, 1042, 1064, 1079, 1100, 1225
CviQI GTAC 2 cut(s) 416, 448
DdeI CTNAG 2 cut(s) 21, 1246
DpnI GATC 7 cut(s) 28, 40, 130, 303, 831, 958, 1062
DpnII GATC 7 cut(s) 26, 38, 128, 301, 829, 956, 1060
DriI GACNNNNNGTC 1 cut(s) 147
EaeI YGGCCR 2 cut(s) 376, 547
Eam1104I CTCTTC 1 cut(s) 292
Eam1105I GACNNNNNGTC 1 cut(s) 147
EarI CTCTTC 1 cut(s) 292
EciI GGCGGA 2 cut(s) 6, 1296
Eco130I CCWWGG 1 cut(s) 539
Eco47I GGWCC 2 cut(s) 928, 1046
Eco57I CTGAAG 1 cut(s) 80
Eco88I CYCGRG 1 cut(s) 1183
EcoRII CCWGG 1 cut(s) 304
EcoT14I CCWWGG 1 cut(s) 539
ErhI CCWWGG 1 cut(s) 539
Esp3I CGTCTC 1 cut(s) 1180
FaeI CATG 9 cut(s) 364, 466, 589, 991, 1045, 1067, 1082, 1103, 1228
FalI AAGNNNNNCTT 4 cut(s) 405, 437, 899, 931
FaqI GGGAC 2 cut(s) 146, 1235
FatI CATG 9 cut(s) 360, 462, 585, 987, 1041, 1063, 1078, 1099, 1224
Fnu4HI GCNGC 9 cut(s) 79, 284, 389, 392, 476, 484, 1251, 1291, 1294
FokI GGATG 4 cut(s) 277, 315, 377, 574
Fsp4HI GCNGC 9 cut(s) 79, 284, 389, 392, 476, 484, 1251, 1291, 1294
FspBI CTAG 1 cut(s) 954
GlaI GCGC 1 cut(s) 138
GluI GCNGC 9 cut(s) 79, 284, 389, 392, 476, 484, 1251, 1291, 1294
GsaI CCCAGC 4 cut(s) 226, 640, 1201, 1222
GsuI CTGGAG 2 cut(s) 318, 1116
HaeII RGCGCY 1 cut(s) 140
HaeIII GGCC 7 cut(s) 118, 378, 475, 549, 1171, 1244, 1324
HapII CCGG 2 cut(s) 294, 1321
HgaI GACGC 1 cut(s) 1197
HhaI GCGC 1 cut(s) 139
Hin1II CATG 9 cut(s) 364, 466, 589, 991, 1045, 1067, 1082, 1103, 1228
Hin6I GCGC 1 cut(s) 137
HinP1I GCGC 1 cut(s) 137
HinfI GANTC 7 cut(s) 32, 228, 382, 429, 576, 662, 979
HpaII CCGG 2 cut(s) 294, 1321
HphI GGTGA 5 cut(s) 59, 250, 1079, 1124, 1221
Hpy166II GTNNAC 4 cut(s) 61, 258, 938, 1076
Hpy188I TCNGA 5 cut(s) 31, 217, 667, 818, 1060
Hpy188III TCNNGA 4 cut(s) 36, 294, 335, 1133
Hpy8I GTNNAC 4 cut(s) 61, 258, 938, 1076
Hpy99I CGWCG 1 cut(s) 254
HpyAV CCTTC 8 cut(s) 96, 617, 640, 679, 912, 1014, 1018, 1197
HpyCH4III ACNGT 5 cut(s) 452, 766, 1073, 1112, 1150
HpyCH4V TGCA 5 cut(s) 180, 368, 462, 504, 1180
HpyF3I CTNAG 2 cut(s) 21, 1246
Hsp92II CATG 9 cut(s) 364, 466, 589, 991, 1045, 1067, 1082, 1103, 1228
HspAI GCGC 1 cut(s) 137
Kpn2I TCCGGA 1 cut(s) 293
Kzo9I GATC 7 cut(s) 26, 38, 128, 301, 829, 956, 1060
Lsp1109I GCAGC 8 cut(s) 90, 270, 378, 400, 470, 1262, 1302, 1305
LweI GCATC 2 cut(s) 189, 355
MaeI CTAG 1 cut(s) 954
MaeIII GTNAC 7 cut(s) 166, 452, 1067, 1082, 1095, 1227, 1309
MalI GATC 7 cut(s) 28, 40, 130, 303, 831, 958, 1062
MbiI CCGCTC 1 cut(s) 1093
MboI GATC 7 cut(s) 26, 38, 128, 301, 829, 956, 1060
MboII GAAGA 6 cut(s) 86, 269, 309, 571, 574, 586
MflI RGATCY 3 cut(s) 38, 301, 956
MhlI GDGCHC 1 cut(s) 672
MlsI TGGCCA 1 cut(s) 378
MluCI AATT 5 cut(s) 171, 201, 273, 498, 811
MluNI TGGCCA 1 cut(s) 378
MlyI GAGTC 3 cut(s) 237, 376, 988
Mox20I TGGCCA 1 cut(s) 378
MroI TCCGGA 1 cut(s) 293
MscI TGGCCA 1 cut(s) 378
MseI TTAA 9 cut(s) 53, 272, 408, 423, 438, 696, 761, 864, 1104
MslI CAYNNNNRTG 2 cut(s) 461, 740
Msp20I TGGCCA 1 cut(s) 378
MspA1I CMGCKG 2 cut(s) 391, 1296
MspI CCGG 2 cut(s) 294, 1321
MspR9I CCNGG 1 cut(s) 306
MvaI CCWGG 1 cut(s) 306
NdeII GATC 7 cut(s) 26, 38, 128, 301, 829, 956, 1060
NlaIII CATG 9 cut(s) 364, 466, 589, 991, 1045, 1067, 1082, 1103, 1228
NlaIV GGNNCC 2 cut(s) 40, 1047
NmuCI GTSAC 4 cut(s) 452, 1067, 1227, 1309
NspI RCATGY 3 cut(s) 466, 1103, 1228
PaeI GCATGC 1 cut(s) 466
PaqCI CACCTGC 1 cut(s) 956
PciI ACATGT 2 cut(s) 1099, 1224
PfeI GAWTC 4 cut(s) 32, 429, 576, 662
PkrI GCNGC 9 cut(s) 80, 285, 390, 393, 477, 485, 1252, 1292, 1295
PleI GAGTC 3 cut(s) 236, 376, 987
PpsI GAGTC 3 cut(s) 236, 376, 987
PscI ACATGT 2 cut(s) 1099, 1224
PshAI GACNNNNGTC 1 cut(s) 1044
Psp6I CCWGG 1 cut(s) 304
PspFI CCCAGC 4 cut(s) 222, 636, 1197, 1218
PspGI CCWGG 1 cut(s) 304
PspN4I GGNNCC 2 cut(s) 40, 1047
PspPI GGNCC 3 cut(s) 116, 928, 1046
PsrI GAACNNNNNNTAC 2 cut(s) 930, 962
PstNI CAGNNNCTG 2 cut(s) 341, 374
PsuI RGATCY 3 cut(s) 38, 301, 956
PvuII CAGCTG 1 cut(s) 391
RsaI GTAC 2 cut(s) 417, 449
RsaNI GTAC 2 cut(s) 416, 448
RseI CAYNNNNRTG 2 cut(s) 461, 740
SaqAI TTAA 9 cut(s) 53, 272, 408, 423, 438, 696, 761, 864, 1104
SatI GCNGC 9 cut(s) 79, 284, 389, 392, 476, 484, 1251, 1291, 1294
Sau3AI GATC 7 cut(s) 26, 38, 128, 301, 829, 956, 1060
Sau96I GGNCC 3 cut(s) 116, 928, 1046
ScaI AGTACT 1 cut(s) 449
SchI GAGTC 3 cut(s) 237, 376, 988
ScrFI CCNGG 1 cut(s) 306
SduI GDGCHC 1 cut(s) 672
SfaNI GCATC 2 cut(s) 189, 355
SfcI CTRYAG 2 cut(s) 469, 960
SinI GGWCC 2 cut(s) 928, 1046
SmiMI CAYNNNNRTG 2 cut(s) 461, 740
SmlI CTYRAG 1 cut(s) 1192
SmoI CTYRAG 1 cut(s) 1192
SphI GCATGC 1 cut(s) 466
Sse9I AATT 5 cut(s) 171, 201, 273, 498, 811
SsiI CCGC 8 cut(s) 17, 386, 476, 1093, 1212, 1281, 1296, 1302
SspMI CTAG 1 cut(s) 954
StyD4I CCNGG 1 cut(s) 304
StyI CCWWGG 1 cut(s) 539
TaaI ACNGT 5 cut(s) 452, 766, 1073, 1112, 1150
TasI AATT 5 cut(s) 171, 201, 273, 498, 811
TatI WGTACW 2 cut(s) 415, 447
TauI GCSGC 1 cut(s) 478
TfiI GAWTC 4 cut(s) 32, 429, 576, 662
Tru1I TTAA 9 cut(s) 53, 272, 408, 423, 438, 696, 761, 864, 1104
Tru9I TTAA 9 cut(s) 53, 272, 408, 423, 438, 696, 761, 864, 1104
TscAI CASTG 2 cut(s) 138, 539
TseFI GTSAC 4 cut(s) 452, 1067, 1227, 1309
TseI GCWGC 8 cut(s) 78, 283, 388, 391, 483, 1250, 1290, 1293
Tsp45I GTSAC 4 cut(s) 452, 1067, 1227, 1309
TspDTI ATGAA 3 cut(s) 574, 724, 1170
TspGWI ACGGA 1 cut(s) 1328
TspRI CASTG 2 cut(s) 138, 539
VpaK11BI GGWCC 2 cut(s) 928, 1046
XapI RAATTY 1 cut(s) 811
XceI RCATGY 3 cut(s) 466, 1103, 1228
XspI CTAG 1 cut(s) 954
ZrmI AGTACT 1 cut(s) 449
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.