Rh2AG669600

Belongs to the DHHC palmitoyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0008943
Physical Location & Seq
Forward (+)
88373492 .. 88377318
3827 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG669600.1

Sequence Viewer

Length: 1332 bp
ATGTACGTGGTGCCTCCGCCTCAGCGATCGGATCCGGCTCCCGGATCCGGCTCCACTGATTCCCGGGTCTACCAAATTTGGAAAGGCAGCAATATATTTTTTCTCCAGGGGAGATTTATCTTTGGACCAGATGTAAGATCCTTGGGCCTCACCATACTTCTAATTCTTGCTCCTGTCACTATTTTCTGCGTCTTTGTTGCCAGAAGGTTGATGGATCATTATTCCTATCACTTGGGAATATTGATTATGGCTGTCGCTGTTGTATTCACAGTCTATGATTTAGTGCTCCTCCTGCTAACCTCTGGAAGAGATCCTGGTATAATCCCCCGTAACACACACCCCCCTGAGCCAGAAGGCTTTGATGGGAGTACAGAAAGTGGGGCAGGACAAACTCCACAGTTGCGCTTGCCTCGCGTCAAAGAAGTAGAGGTGAATGGTATCTCTGTTAAGATCAAATACTGTGATACTTGTATGCTTTATAGACCCCCTCGCTGCTCCCACTGTTCAATATGCAACAACTGTGTGGAACGATTCGACCACCACTGTCCCTGGGTTGGACAGTGTATTGGGCTGAGAAATTATCGATTCTTCTTCATGTTTGTCTTCTCCACAACCCTTCTTTGTATATACGTGTTTGCATTCTGCTGGGTATATGTTAGGAGGATCATGGGAAGCGATGACACAACAATTTGGAAAGCAATGATAAAAACTCCAGCCTCTATTGTTCTAATAGTTTACACTTTTATATCGATGTGGTTTGTTGGCGGCCTTACTGCCTTCCATTTATATCTCATCAGTACAAATCAGACTACATATGAGAATTTTCGATATCGATATGATAGGCGAGCCAATCCATATAACAAAGGAGTTGTTAACAATTTCAAGGAGATATTTTGCACCAGCATTCCTGAGTCTAAGAATGACTTCAGGGAAAAGGTGCCAAGGGAACCTGTGTTACCTCCTCGACCAGGCGGTGGCGGTTTTATGAGCCCAAATATGGGAAAAGCCGTGGACGACATAGAAATGGGAAGAAAAACTGTGTGGGGAGACATGGGTGCCGGGGGTGATCATTTTGAAGGGCAACTTAACAGCAATGATCGCCAGAATGTAAAGGATGGGGAACTAGGTGAAGTTTCCCCAGACATGAGGACTACAGTAGACGAGACTGTGGATCGTGCTGGAATACATCCCAGGCGATCCAGCTGGGGAAGGAAAAGTGGAAGTTGGGAAATGTCACCTGAAGTTCTTGCTTTGGCAGCTAGAGTTGGGGAACCAAACCACATGGGTGGGAGTAGTAGCAGTGGCTTGACAAATGAAAACCGACAGACATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
ko04391 map04391
Pfam Domains
Protein Families
DHHC

Protein Analysis

443

Amino Acids

49.82

Weight (kDa)

8.53

Isoelectric Point (pI)

39.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DHHC PF01529 150 - 276 2.6e-40 DHHC palmitoyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 10, 937, 1055
AccB7I CCANNNNNTGG 1 cut(s) 974
AccI GTMKAC 2 cut(s) 69, 1158
AccII CGCG 1 cut(s) 414
AciI CCGC 4 cut(s) 17, 765, 972, 978
AcsI RAATTY 2 cut(s) 75, 820
AcuI CTGAAG 2 cut(s) 910, 1260
AfaI GTAC 3 cut(s) 5, 370, 799
AfiI CCNNNNNNNGG 7 cut(s) 41, 47, 554, 968, 974, 997, 998
AflIII ACRYGT 1 cut(s) 630
AgsI TTSAA 3 cut(s) 507, 883, 1076
AjnI CCWGG 5 cut(s) 105, 313, 548, 967, 1190
AleI CACNNNNGTG 1 cut(s) 1284
AluBI AGCT 2 cut(s) 1203, 1259
AluI AGCT 2 cut(s) 1203, 1259
Alw21I GWGCWC 1 cut(s) 288
Alw26I GTCTC 2 cut(s) 1041, 1157
Ama87I CYCGRG 1 cut(s) 63
AoxI GGCC 2 cut(s) 145, 766
ApeKI GCWGC 3 cut(s) 87, 492, 1256
ApoI RAATTY 2 cut(s) 75, 820
Asp700I GAANNNNTTC 1 cut(s) 923
AspLEI GCGC 1 cut(s) 405
AspS9I GGNCC 2 cut(s) 125, 145
AsuC2I CCSGG 4 cut(s) 42, 64, 65, 1060
AsuHPI GGTGA 5 cut(s) 142, 442, 1076, 1139, 1227
AvaI CYCGRG 1 cut(s) 63
AvaII GGWCC 1 cut(s) 125
BamHI GGATCC 2 cut(s) 31, 44
BanI GGYRCC 3 cut(s) 10, 937, 1055
BanII GRGCYC 1 cut(s) 992
BbsI GAAGAC 1 cut(s) 595
Bbv12I GWGCWC 1 cut(s) 288
BbvCI CCTCAGC 1 cut(s) 21
BbvI GCAGC 3 cut(s) 99, 479, 1268
BccI CCATC 3 cut(s) 205, 356, 1109
BceAI ACGGC 1 cut(s) 992
BciT130I CCWGG 5 cut(s) 107, 315, 550, 969, 1192
BclI TGATCA 1 cut(s) 1066
BcnI CCSGG 4 cut(s) 42, 64, 65, 1060
BcoDI GTCTC 2 cut(s) 1041, 1157
BfaI CTAG 2 cut(s) 1124, 1260
BfmI CTRYAG 1 cut(s) 1152
BisI GCNGC 4 cut(s) 88, 493, 766, 1257
BlsI GCNGC 4 cut(s) 89, 494, 767, 1258
Bme1390I CCNGG 9 cut(s) 42, 64, 65, 107, 315, 550, 969, 1060, 1192
Bme18I GGWCC 1 cut(s) 125
BmeT110I CYCGRG 1 cut(s) 63
BmgT120I GGNCC 2 cut(s) 125, 145
BmiI GGNNCC 9 cut(s) 12, 33, 39, 46, 52, 939, 948, 1057, 1272
BmrFI CCNGG 9 cut(s) 42, 64, 65, 107, 315, 550, 969, 1060, 1192
BpiI GAAGAC 1 cut(s) 595
BpmI CTGGAG 2 cut(s) 89, 696
Bpu10I CCTNAGC 2 cut(s) 21, 345
BpuMI CCSGG 4 cut(s) 42, 64, 65, 1060
Bsa29I ATCGAT 3 cut(s) 583, 749, 832
BsaAI YACGTR 2 cut(s) 7, 631
BsaJI CCNNGG 9 cut(s) 63, 106, 141, 548, 549, 941, 1008, 1059, 1190
Bsc4I CCNNNNNNNGG 7 cut(s) 41, 47, 554, 968, 974, 997, 998
Bse3DI GCAATG 2 cut(s) 705, 1099
BseBI CCWGG 5 cut(s) 107, 315, 550, 969, 1192
BseCI ATCGAT 3 cut(s) 583, 749, 832
BseDI CCNNGG 9 cut(s) 63, 106, 141, 548, 549, 941, 1008, 1059, 1190
BseGI GGATG 2 cut(s) 1120, 1186
BseLI CCNNNNNNNGG 7 cut(s) 41, 47, 554, 968, 974, 997, 998
BseMI GCAATG 2 cut(s) 705, 1099
BseMII CTCAG 4 cut(s) 35, 336, 563, 900
BseRI GAGGAG 2 cut(s) 278, 951
BseXI GCAGC 3 cut(s) 99, 479, 1268
BseYI CCCAGC 2 cut(s) 645, 1203
Bsh1236I CGCG 1 cut(s) 414
Bsh1285I CGRYCG 1 cut(s) 29
BshFI GGCC 2 cut(s) 147, 768
BshNI GGYRCC 3 cut(s) 10, 937, 1055
BshVI ATCGAT 3 cut(s) 583, 749, 832
BsiEI CGRYCG 1 cut(s) 29
BsiHKAI GWGCWC 1 cut(s) 288
BsiHKCI CYCGRG 1 cut(s) 63
BsiSI CCGG 5 cut(s) 35, 42, 48, 64, 1059
BslFI GGGAC 1 cut(s) 531
BslI CCNNNNNNNGG 7 cut(s) 41, 47, 554, 968, 974, 997, 998
BsmAI GTCTC 2 cut(s) 1041, 1157
BsmFI GGGAC 1 cut(s) 531
BsmI GAATGC 2 cut(s) 638, 903
BsnI GGCC 2 cut(s) 147, 768
BsoBI CYCGRG 1 cut(s) 63
Bsp1286I GDGCHC 2 cut(s) 288, 992
BspACI CCGC 4 cut(s) 17, 765, 972, 978
BspANI GGCC 2 cut(s) 147, 768
BspCNI CTCAG 4 cut(s) 34, 337, 564, 901
BspDI ATCGAT 3 cut(s) 583, 749, 832
BspFNI CGCG 1 cut(s) 414
BspLI GGNNCC 9 cut(s) 12, 33, 39, 46, 52, 939, 948, 1057, 1272
BspT107I GGYRCC 3 cut(s) 10, 937, 1055
BsrDI GCAATG 2 cut(s) 705, 1099
BssECI CCNNGG 9 cut(s) 63, 106, 141, 548, 549, 941, 1008, 1059, 1190
BssT1I CCWWGG 2 cut(s) 141, 941
Bst2UI CCWGG 5 cut(s) 107, 315, 550, 969, 1192
Bst6I CTCTTC 1 cut(s) 301
BstBAI YACGTR 2 cut(s) 7, 631
BstC8I GCNNGC 2 cut(s) 407, 846
BstDEI CTNAG 5 cut(s) 21, 345, 572, 909, 915
BstDSI CCRYGG 1 cut(s) 1008
BstENI CCTNNNNNAGG 1 cut(s) 966
BstF5I GGATG 2 cut(s) 1120, 1186
BstFNI CGCG 1 cut(s) 414
BstHHI GCGC 1 cut(s) 405
BstMAI GTCTC 2 cut(s) 1041, 1157
BstMCI CGRYCG 1 cut(s) 29
BstMWI GCNNNNNNNGC 4 cut(s) 292, 411, 1098, 1256
BstNI CCWGG 5 cut(s) 107, 315, 550, 969, 1192
BstSCI CCNGG 9 cut(s) 40, 62, 63, 105, 313, 548, 967, 1058, 1190
BstSFI CTRYAG 1 cut(s) 1152
BstUI CGCG 1 cut(s) 414
BstV1I GCAGC 3 cut(s) 99, 479, 1268
BstV2I GAAGAC 1 cut(s) 595
BstX2I RGATCY 4 cut(s) 31, 44, 137, 310
BstXI CCANNNNNNTGG 1 cut(s) 1286
BstYI RGATCY 4 cut(s) 31, 44, 137, 310
Bsu15I ATCGAT 3 cut(s) 583, 749, 832
BsuRI GGCC 2 cut(s) 147, 768
BsuTUI ATCGAT 3 cut(s) 583, 749, 832
BtgI CCRYGG 1 cut(s) 1008
BtgZI GCGATG 1 cut(s) 690
BtsCI GGATG 2 cut(s) 1120, 1186
BtsI GCAGTG 1 cut(s) 1306
BtsIMutI CAGTG 5 cut(s) 54, 499, 541, 566, 1306
Cac8I GCNNGC 2 cut(s) 407, 846
CfoI GCGC 1 cut(s) 405
Cfr13I GGNCC 2 cut(s) 125, 145
Cfr9I CCCGGG 1 cut(s) 63
ClaI ATCGAT 3 cut(s) 583, 749, 832
CseI GACGC 2 cut(s) 178, 403
Csp6I GTAC 3 cut(s) 4, 369, 798
CviAII CATG 5 cut(s) 595, 667, 1051, 1144, 1282
CviQI GTAC 3 cut(s) 4, 369, 798
DdeI CTNAG 5 cut(s) 21, 345, 572, 909, 915
Eam1104I CTCTTC 1 cut(s) 301
EarI CTCTTC 1 cut(s) 301
EciI GGCGGA 1 cut(s) 6
Eco130I CCWWGG 2 cut(s) 141, 941
Eco24I GRGCYC 1 cut(s) 992
Eco32I GATATC 1 cut(s) 830
Eco47I GGWCC 1 cut(s) 125
Eco57I CTGAAG 2 cut(s) 910, 1260
Eco88I CYCGRG 1 cut(s) 63
EcoNI CCTNNNNNAGG 1 cut(s) 966
EcoRII CCWGG 5 cut(s) 105, 313, 548, 967, 1190
EcoRV GATATC 1 cut(s) 830
EcoT14I CCWWGG 2 cut(s) 141, 941
EcoT38I GRGCYC 1 cut(s) 992
ErhI CCWWGG 2 cut(s) 141, 941
FaeI CATG 5 cut(s) 598, 670, 1054, 1147, 1285
FalI AAGNNNNNCTT 4 cut(s) 908, 940, 1068, 1100
FaqI GGGAC 1 cut(s) 531
FatI CATG 5 cut(s) 594, 666, 1050, 1143, 1281
FauNDI CATATG 1 cut(s) 814
FbaI TGATCA 1 cut(s) 1066
FblI GTMKAC 2 cut(s) 69, 1158
Fnu4HI GCNGC 4 cut(s) 88, 493, 766, 1257
FokI GGATG 2 cut(s) 1127, 1173
FriOI GRGCYC 1 cut(s) 992
Fsp4HI GCNGC 4 cut(s) 88, 493, 766, 1257
FspBI CTAG 2 cut(s) 1124, 1260
GlaI GCGC 1 cut(s) 404
GluI GCNGC 4 cut(s) 88, 493, 766, 1257
GsaI CCCAGC 2 cut(s) 649, 1207
GsuI CTGGAG 2 cut(s) 89, 696
HaeIII GGCC 2 cut(s) 147, 768
HapII CCGG 5 cut(s) 35, 42, 48, 64, 1059
HgaI GACGC 2 cut(s) 178, 403
HhaI GCGC 1 cut(s) 405
Hin1II CATG 5 cut(s) 598, 670, 1054, 1147, 1285
Hin6I GCGC 1 cut(s) 403
HinP1I GCGC 1 cut(s) 403
HincII GTYRAC 1 cut(s) 874
HindII GTYRAC 1 cut(s) 874
HinfI GANTC 4 cut(s) 59, 531, 585, 911
HpaI GTTAAC 1 cut(s) 874
HpaII CCGG 5 cut(s) 35, 42, 48, 64, 1059
HphI GGTGA 5 cut(s) 142, 442, 1076, 1139, 1227
Hpy166II GTNNAC 5 cut(s) 70, 736, 874, 1012, 1159
Hpy188I TCNGA 2 cut(s) 31, 807
Hpy188III TCNNGA 2 cut(s) 303, 908
Hpy8I GTNNAC 5 cut(s) 70, 736, 874, 1012, 1159
HpyAV CCTTC 6 cut(s) 198, 347, 626, 787, 1070, 1203
HpyCH4IV ACGT 2 cut(s) 6, 630
HpyCH4V TGCA 3 cut(s) 513, 638, 897
HpyF10VI GCNNNNNNNGC 4 cut(s) 292, 411, 1098, 1256
HpyF3I CTNAG 5 cut(s) 21, 345, 572, 909, 915
HpySE526I ACGT 2 cut(s) 6, 630
Hsp92II CATG 5 cut(s) 598, 670, 1054, 1147, 1285
HspAI GCGC 1 cut(s) 403
Ksp22I TGATCA 1 cut(s) 1066
KspAI GTTAAC 1 cut(s) 874
LmnI GCTCC 5 cut(s) 43, 56, 175, 291, 500
Lsp1109I GCAGC 3 cut(s) 99, 479, 1268
MaeI CTAG 2 cut(s) 1124, 1260
MaeII ACGT 2 cut(s) 6, 630
MaeIII GTNAC 4 cut(s) 175, 329, 954, 1233
MboII GAAGA 5 cut(s) 318, 580, 583, 595, 1041
MflI RGATCY 4 cut(s) 31, 44, 137, 310
MhlI GDGCHC 2 cut(s) 288, 992
MluCI AATT 6 cut(s) 75, 162, 577, 687, 820, 877
MlyI GAGTC 1 cut(s) 920
MmeI TCCRAC 1 cut(s) 535
MroXI GAANNNNTTC 1 cut(s) 923
MseI TTAA 3 cut(s) 447, 873, 1086
MslI CAYNNNNRTG 2 cut(s) 1022, 1284
MspA1I CMGCKG 1 cut(s) 1203
MspI CCGG 5 cut(s) 35, 42, 48, 64, 1059
MspR9I CCNGG 9 cut(s) 42, 64, 65, 107, 315, 550, 969, 1060, 1192
Mva1269I GAATGC 2 cut(s) 638, 903
MvaI CCWGG 5 cut(s) 107, 315, 550, 969, 1192
MvnI CGCG 1 cut(s) 414
MwoI GCNNNNNNNGC 4 cut(s) 292, 411, 1098, 1256
NciI CCSGG 4 cut(s) 42, 64, 65, 1060
NdeI CATATG 1 cut(s) 814
NlaIII CATG 5 cut(s) 598, 670, 1054, 1147, 1285
NlaIV GGNNCC 9 cut(s) 12, 33, 39, 46, 52, 939, 948, 1057, 1272
NmuCI GTSAC 2 cut(s) 175, 1233
OliI CACNNNNGTG 1 cut(s) 1284
PasI CCCWGGG 1 cut(s) 549
PctI GAATGC 2 cut(s) 638, 903
PdmI GAANNNNTTC 1 cut(s) 923
PfeI GAWTC 3 cut(s) 59, 531, 585
PflMI CCANNNNNTGG 1 cut(s) 974
PfoI TCCNGGA 1 cut(s) 40
PkrI GCNGC 4 cut(s) 89, 494, 767, 1258
Ple19I CGATCG 1 cut(s) 29
PleI GAGTC 1 cut(s) 919
PpsI GAGTC 1 cut(s) 919
Ppu21I YACGTR 2 cut(s) 7, 631
Psp6I CCWGG 5 cut(s) 105, 313, 548, 967, 1190
PspFI CCCAGC 2 cut(s) 645, 1203
PspGI CCWGG 5 cut(s) 105, 313, 548, 967, 1190
PspN4I GGNNCC 9 cut(s) 12, 33, 39, 46, 52, 939, 948, 1057, 1272
PspPI GGNCC 2 cut(s) 125, 145
PsrI GAACNNNNNNTAC 2 cut(s) 939, 971
PsuI RGATCY 4 cut(s) 31, 44, 137, 310
PvuI CGATCG 1 cut(s) 29
PvuII CAGCTG 1 cut(s) 1203
RsaI GTAC 3 cut(s) 5, 370, 799
RsaNI GTAC 3 cut(s) 4, 369, 798
RseI CAYNNNNRTG 2 cut(s) 1022, 1284
SaqAI TTAA 3 cut(s) 447, 873, 1086
SatI GCNGC 4 cut(s) 88, 493, 766, 1257
Sau96I GGNCC 2 cut(s) 125, 145
SchI GAGTC 1 cut(s) 920
ScrFI CCNGG 9 cut(s) 42, 64, 65, 107, 315, 550, 969, 1060, 1192
SduI GDGCHC 2 cut(s) 288, 992
SfcI CTRYAG 1 cut(s) 1152
SinI GGWCC 1 cut(s) 125
SmaI CCCGGG 1 cut(s) 65
SmiMI CAYNNNNRTG 2 cut(s) 1022, 1284
Sse9I AATT 6 cut(s) 75, 162, 577, 687, 820, 877
SsiI CCGC 4 cut(s) 17, 765, 972, 978
SspI AATATT 1 cut(s) 240
SspMI CTAG 2 cut(s) 1124, 1260
StyD4I CCNGG 9 cut(s) 40, 62, 63, 105, 313, 548, 967, 1058, 1190
StyI CCWWGG 2 cut(s) 141, 941
TaiI ACGT 2 cut(s) 9, 633
TaqI TCGA 6 cut(s) 534, 583, 749, 826, 832, 964
TasI AATT 6 cut(s) 75, 162, 577, 687, 820, 877
TatI WGTACW 2 cut(s) 368, 797
TauI GCSGC 1 cut(s) 768
TfiI GAWTC 3 cut(s) 59, 531, 585
Tru1I TTAA 3 cut(s) 447, 873, 1086
Tru9I TTAA 3 cut(s) 447, 873, 1086
TscAI CASTG 5 cut(s) 61, 506, 548, 566, 1306
TseFI GTSAC 2 cut(s) 175, 1233
TseI GCWGC 3 cut(s) 87, 492, 1256
Tsp45I GTSAC 2 cut(s) 175, 1233
TspDTI ATGAA 2 cut(s) 583, 1329
TspMI CCCGGG 1 cut(s) 63
TspRI CASTG 5 cut(s) 61, 506, 548, 566, 1306
Van91I CCANNNNNTGG 1 cut(s) 974
VpaK11BI GGWCC 1 cut(s) 125
XagI CCTNNNNNAGG 1 cut(s) 966
XapI RAATTY 2 cut(s) 75, 820
XcmI CCANNNNNNNNNTGG 1 cut(s) 208
XmaI CCCGGG 1 cut(s) 63
XmiI GTMKAC 2 cut(s) 69, 1158
XmnI GAANNNNTTC 1 cut(s) 923
XspI CTAG 2 cut(s) 1124, 1260
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.