Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0009778

Physical Location & Seq

Genomic Coordinates Reverse (-)

10870005 .. 10877578

Gene Structure 7574 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G28860.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3759 bp

ATGTCGGAAACTAACACAACCGATGCCAAGACTGTTCCAGCAGAAGCAGAGAAGAAGAAAGAACAGAGTTTACCATTCTTTAAACTCTTTTCTTTCGCTGATAAATTTGATTATCTCTTAATGTTCGTTGGTTCTCTTGGTGCCATTGTTCATGGCTCTTCCATGCCTGTCTTCTTTTTACTCTTTGGTCAAATGGTTAATGGATTTGGTAAAAACCAAATGGATTTACATCAAATGGTTCATGAAGTCTCTAGATATTCTCTATATTTCGTCTACTTGGGTTTGGTCGTTTGCTTCTCTTCTTACGCAGAGATAGCATGTTGGATGTATTCTGGAGAAAGACAAGTAGCAGCATTAAGGAAGAAATATCTTGAAGCAGTATTAAAACAAGACGTTGGGTTCTTTGATACTGATGCTAGAACTGGTGACATTGTCTTTAGTGTTTCTACTGATACTCTTCTTGTTCAAGATGCCATTAGTGAAAAGGTTGGAAACTTTATACATTACCTCTCAACATTTTTGGCGGGATTAGTAGTTGGATTTGTATCAGCATGGAAATTAGCTTTGTTAAGTGTTGCTGTGATTCCCGGAATCGCTTTCGCCGGAGGTTTATACGCTTATACACTCACCGGAATTACTTCAAAGAGCCGTGAATCTTATGCTAACGCCGGTGTTATCGCCGAGCAGGCAATTGCTCAAGTTCGAACTGTTTATTCTTATGTTGGAGAGAGTAAGGCACTTAATGCGTATTCGGATGCGATTCAGTATACGCTTAAGCTCGGTTATAAAGCGGGGATGGCTAAAGGGTTGGGTTTAGGATGTACTTATGGAATAGCTTGTATGTCATGGGCTTTGGTGTTTTGGTATGCTGGAGTTTTTATTCGGAATGGACAAACCGATGGAGGAAAGGCGTTTACTGCTATATTCTCTGCTATTGTTGGTGGAATGAGTTTGGGGCAATCTTTCTCGAATCTTGGGGCGTTTAGTAAAGGTAAAGCGGCTGGTTATAAGTTGATGGAGATAATTAACCAGAGACCGACGATAATTCAAGACCCGTTGGATGGAAAATGTTTGGATCAAGTTCATGGGAACATTGAGTTTAAAGATGTGACTTTTAGCTATCCTTCACGGCCTGATGTTATGATCTTCAGGAACTTTAATATTTTCTTCCCTTCTGGGAAAACTGTGGCGGTTGTTGGTGGGAGTGGCTCTGGAAAGAGTACTGTTGTTTCCCTCATTGAGAGATTCTATGATCCAAACAGCGGGCAAATTCTGTTGGATGGTGTTGAGATAAAGACGCTTCAGTTGAAGTTTTTGCGTGAACAAATCGGGCTTGTGAATCAAGAACCTGCGCTCTTTGCCACTACTATACTAGAGAACATACTCTATGGAAAGCCTGATGCAACAATGGTTGAAGTTGAAGCTGCTGCTTCCGCTGCGAATGCGCATAGTTTCATTACATTACTTCCTAAAGGCTACGACACACAGGTTGGAGAACGTGGTGTTCAACTCTCAGGTGGACAGAAGCAGAGAATTGCAATTGCTAGGGCGATGTTGAAAGACCCAAAGATTCTGTTACTAGATGAAGCTACAAGCGCTCTTGATGCTAGCTCTGAGAGCATTGTTCAGGAAGCTTTAGACAGAGTCATGGTGGGGAGGACCACTGTTGTTGTTGCTCATCGTCTCTGCACCATCAGAAATGTTGATTCCATTGCCGTGATACAGCAAGGCCAAGTTGTTGAAACCGGAACACATGAAGAACTCATTGCCAAATCCGGTGCTTACGCATCCCTCATCAGGTTTCAGGAAATGGTTGGTACTCGAGATTTCTCAAACCCGTCAACTCGTCGCACTCGTTCAACCCGTTTGAGCCATTCACTGTCAACGAAATCACTCAGTTTAAGATCAGGAAGTTTGAGGAATCTGAGCTATTCTTACAGCACTGGAGCTGATGGTCGGATAGAGATGATTTCAAATGCAGAGACTGACCGAAAGACTCGTGCCCCTGAAAATTACTTCTACAGGCTTCTCAAGCTTAATTCACCGGAATGGCCTTACTCAATCATGGGAGCAGTAGGCTCAATTCTTTCTGGTTTCATTGGTCCTACATTTGCTATTGTGATGAGCAACATGATCGAAGTCTTCTACTACACAGACTATGATTCAATGGAAAGGAAAACAAAAGAGTATGTCTTCATCTACATTGGTGCTGGTCTCTATGCTGTGGGTGCTTATTTGATCCAACATTACTTCTTTAGCATCATGGGAGAAAACCTCACAACAAGAGTAAGAAGAATGATGCTCTCAGCTATCTTGAGAAACGAAGTTGGTTGGTTCGATGAGGATGAACACAACTCAAGCCTGATCGCTGCACGTTTAGCTACTGATGCAGCAGATGTTAAATCCGCTATAGCCGAGAGAATCTCAGTAATTCTACAAAACATGACTTCACTTCTCACATCCTTCATAGTCGCCTTCATAGTAGAATGGAGAGTCTCACTTCTCATCTTAGGCACATTCCCACTTCTAGTCCTCGCTAACTTTGCTCAGCAACTATCTCTGAAGGGTTTTGCTGGAGACACAGCTAAGGCTCATGCAAAGACTTCAATGATTGCTGGTGAAGGAGTCAGTAACATTAGAACCGTAGCAGCTTTCAATGCACAGAGCAAGATTCTCTCTTTGTTCTGTCATGAGCTTCGTGTACCTCAGAAAAGAAGCTTATACCGAAGTCAAACCTCGGGTTTCCTATTTGGCCTCTCGCAGCTTGCTCTCTATGGTTCTGAGGCTTTAATTCTCTGGTATGGTGCCCACCTTGTGAGTAAAGGCGTGTCAACCTTTTCCAAAGTGATCAAAGTGTTTGTGGTTTTGGTCATTACTGCAAACTCTGTTGCTGAAACTGTCAGTCTTGCTCCTGAAATTATTCGGGGAGGTGAAGCTGTTGGTTCGGTTTTCTCGGTCTTGGACAGGCAGACCAGGATTGACCCGGATGATGCTGATGCTGATCCCGTGGAGACGATCCGTGGAGACATTGAGTTTAGGCATGTTGATTTCGCTTACCCTTCAAGACCCGACGTCATGGTTTTCAGGGACTTTAACCTCAGAATTCGAGCTGGACATAGCCAAGCTCTTGTGGGCGCGAGTGGGTCAGGGAAGAGTTCTGTAATTGCGATGATCGAGCGGTTTTACGACCCTCTTGCTGGAAAAGTCATGATTGATGGCAAAGACATCCGCCGGCTAAACCTGAAATCTCTAAGGCTCAAAATCGGTCTTGTTCAACAAGAACCAGCTCTCTTCGCAGCAACGATCTTCGACAACATCGCCTATGGTAAAGATGGTGCAACTGAATCCGAGGTAATTGATGCAGCTCGAGCCGCAAATGCTCACGGTTTCATCAGTGGTTTACCTGAAGGTTACAAAACTCCAGTAGGCGAAAGAGGAGTGCAGTTATCAGGTGGACAGAAACAGAGGATCGCGATAGCAAGAGCTGTGCTCAAGAACCCTACAGTGTTGCTTCTAGACGAAGCAACTAGCGCACTAGATGCAGAATCAGAATGCGTGCTGCAAGAGGCGTTAGAGAGGCTCATGAGAGGTCGGACCACCGTGGTAGTTGCTCACCGCTTGTCCACCATAAGAGGTGTTGATTGCATTGGTGTGATTCAAGACGGGCGGATTGTGGAGCAAGGCAGCCATTCAGAGCTCGTTAGCCGACCAGAGGGAGCTTATTCAAGGCTGTTACAGCTTCAAACACATAGGATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0007275 GO:0008150 GO:0008361 GO:0009314 GO:0009411 GO:0009416 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009637 GO:0009639 GO:0009640 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009791 GO:0009908 GO:0009914 GO:0009926 GO:0009958 GO:0009966 GO:0009987 GO:0010033 GO:0010218 GO:0010315 GO:0010329 GO:0010540 GO:0010541 GO:0010646 GO:0010817 GO:0010928 GO:0015562 GO:0016020 GO:0016043 GO:0022414 GO:0022622 GO:0022857 GO:0023051 GO:0032501 GO:0032502 GO:0032535 GO:0042221 GO:0043473 GO:0043476 GO:0043478 GO:0043479 GO:0043480 GO:0043481 GO:0044464 GO:0048364 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048527 GO:0048528 GO:0048583 GO:0048608 GO:0048646 GO:0048731 GO:0048827 GO:0048856 GO:0048859 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0060918 GO:0061458 GO:0065007 GO:0065008 GO:0071840 GO:0071944 GO:0080161 GO:0090066 GO:0090567 GO:0090691 GO:0090696 GO:0099402

KEGG Pathways

Metabolic & Signaling

ko02010 ko04976 ko05206 ko05226 map02010 map04976 map05206 map05226

Pfam Domains

Protein Families

ABC_membrane ABC_tran

Protein Analysis

1252

Amino Acids

136.79

Weight (kDa)

8.38

Isoelectric Point (pI)

34.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_membrane	PF00664	42 - 314	1.1e-54	ABC transporter transmembrane region
ABC_tran	PF00005	384 - 532	4.6e-32	ABC transporter
ABC_membrane	PF00664	688 - 959	1.5e-50	ABC transporter transmembrane region
ABC_tran	PF00005	1029 - 1177	1.6e-30	ABC transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0009778)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G28860
fragaria_vesca	FvH4_6g48960 FvH4_6g48960 FvH4_6g48960 FvH4_6g48960 FvH4_6g48960
malus_domestica	MD09G1049400.v1.1 MD17G1049500.v1.1 MD17G1049600.v1.1
prunus_persica	Prupe.3G269400_v2.0.a1 Prupe.3G269400_v2.0.a1
pyrus_communis	pycom111g04040 pycom17g04450
rosa_chinensis	RchiOBHm_Chr2g0168761
rosa_laevigata	RLG00000021808
rosa_multiflora	Rmu_ssc0000393.1_g000001
rosa_roxburghii	Rroxscaffold_2G00082690
rosa_rugosa	Rorug02G0535300
rosa_samantha	Rh2BG619000 Rh2DG629700
rosa_wichuraiana	Rw2G050250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	786, 1008
AatII	GACGTC	1 cut(s)	3075
Acc16I	TGCGCA	1 cut(s)	1446
Acc36I	ACCTGC	1 cut(s)	1357
AccB1I	GGYRCC	2 cut(s)	140, 2804
AccBSI	CCGCTC	1 cut(s)	3178
AccI	GTMKAC	2 cut(s)	273, 767
AccII	CGCG	2 cut(s)	3137, 3473
AclWI	GGATC	6 cut(s)	1083, 1247, 2233, 2996, 3010, 3476
AcsI	RAATTY	3 cut(s)	104, 1269, 3102
AcuI	CTGAAG	4 cut(s)	1132, 1286, 2582, 3426
AcyI	GRCGYC	1 cut(s)	3072
AdeI	CACNNNGTG	1 cut(s)	2815
AfaI	GTAC	4 cut(s)	823, 1222, 1819, 2703
AfeI	AGCGCT	1 cut(s)	1597
AfiI	CCNNNNNNNGG	5 cut(s)	1061, 1262, 1797, 3197, 3712
AflII	CTTAAG	1 cut(s)	773
AhdI	GACNNNNNGTC	1 cut(s)	3071
AjnI	CCWGG	1 cut(s)	2972
Alw21I	GWGCWC	2 cut(s)	3492, 3699
Alw26I	GTCTC	9 cut(s)	253, 1027, 1688, 1976, 2219, 2500, 2571, 3005, 3018
AlwI	GGATC	6 cut(s)	1083, 1247, 2233, 2996, 3010, 3476
AlwNI	CAGNNNCTG	1 cut(s)	1985
Ama87I	CYCGRG	3 cut(s)	1821, 2737, 3366
Aor51HI	AGCGCT	1 cut(s)	1597
AoxI	GGCC	4 cut(s)	1130, 1729, 2051, 2752
ApoI	RAATTY	3 cut(s)	104, 1269, 3102
Asp700I	GAANNNNTTC	2 cut(s)	637, 2919
AspLEI	GCGC	5 cut(s)	1354, 1447, 1598, 3137, 3533
AspS9I	GGNCC	3 cut(s)	1659, 2102, 3594
AsuC2I	CCSGG	2 cut(s)	588, 2984
AsuHPI	GGTGA	6 cut(s)	437, 619, 2034, 2630, 2942, 3605
AsuII	TTCGAA	1 cut(s)	703
AsuNHI	GCTAGC	1 cut(s)	1607
AvaI	CYCGRG	3 cut(s)	1821, 2737, 3366
AvaII	GGWCC	3 cut(s)	1659, 2102, 3594
BaeGI	GKGCMC	2 cut(s)	2005, 2809
BanI	GGYRCC	2 cut(s)	140, 2804
BanII	GRGCYC	1 cut(s)	3699
BauI	CACGAG	1 cut(s)	1998
BbsI	GAAGAC	3 cut(s)	163, 2134, 2185
Bbv12I	GWGCWC	2 cut(s)	3492, 3699
BccI	CCATC	9 cut(s)	790, 893, 1009, 1055, 1274, 1700, 1946, 3209, 3326
BceAI	ACGGC	3 cut(s)	633, 1145, 1700
BcgI	CGANNNNNNTGC	4 cut(s)	2116, 2150, 3176, 3210
BciT130I	CCWGG	1 cut(s)	2974
BclI	TGATCA	1 cut(s)	2847
BcnI	CCSGG	2 cut(s)	588, 2984
BcoDI	GTCTC	9 cut(s)	253, 1027, 1688, 1976, 2219, 2500, 2571, 3005, 3018
BfmI	CTRYAG	3 cut(s)	2020, 2409, 3501
BfoI	RGCGCY	1 cut(s)	1599
BfrI	CTTAAG	1 cut(s)	773
BfuAI	ACCTGC	1 cut(s)	1357
BglI	GCCNNNNNGGC	1 cut(s)	686
BlpI	GCTNAGC	1 cut(s)	2547
BmcAI	AGTACT	1 cut(s)	1222
Bme1390I	CCNGG	3 cut(s)	588, 2974, 2984
Bme18I	GGWCC	3 cut(s)	1659, 2102, 3594
BmeRI	GACNNNNNGTC	1 cut(s)	3071
BmeT110I	CYCGRG	3 cut(s)	1821, 2737, 3366
BmgT120I	GGNCC	3 cut(s)	1659, 2102, 3594
BmiI	GGNNCC	2 cut(s)	142, 2806
BmrFI	CCNGG	3 cut(s)	588, 2974, 2984
BmtI	GCTAGC	1 cut(s)	1611
BpiI	GAAGAC	3 cut(s)	163, 2134, 2185
BplI	GAGNNNNNCTC	6 cut(s)	2259, 2291, 2408, 2440, 3474, 3506
BpmI	CTGGAG	5 cut(s)	354, 891, 1965, 2595, 3405
Bpu10I	CCTNAGC	1 cut(s)	2586
Bpu1102I	GCTNAGC	1 cut(s)	2547
Bpu14I	TTCGAA	1 cut(s)	703
BpuEI	CTTGAG	5 cut(s)	681, 2015, 2335, 2341, 3476
BpuMI	CCSGG	2 cut(s)	588, 2984
BsaBI	GATNNNNATC	3 cut(s)	228, 544, 3000
BsaHI	GRCGYC	1 cut(s)	3072
BsaI	GGTCTC	2 cut(s)	1027, 2219
BsaJI	CCNNGG	5 cut(s)	2736, 3006, 3019, 3348, 3600
BsaWI	WCCGGW	4 cut(s)	629, 1745, 1775, 2044
Bsc4I	CCNNNNNNNGG	5 cut(s)	1061, 1262, 1797, 3197, 3712
Bse118I	RCCGGY	2 cut(s)	668, 3231
Bse1I	ACTGG	3 cut(s)	427, 1948, 3422
Bse3DI	GCAATG	2 cut(s)	1710, 1764
Bse8I	GATNNNNATC	3 cut(s)	228, 544, 3000
BseBI	CCWGG	1 cut(s)	2974
BseDI	CCNNGG	5 cut(s)	2736, 3006, 3019, 3348, 3600
BseJI	GATNNNNATC	3 cut(s)	228, 544, 3000
BseLI	CCNNNNNNNGG	5 cut(s)	1061, 1262, 1797, 3197, 3712
BseMI	GCAATG	2 cut(s)	1710, 1764
BseNI	ACTGG	3 cut(s)	427, 1948, 3422
BseRI	GAGGAG	1 cut(s)	3450
BseSI	GKGCMC	2 cut(s)	2005, 2809
BsgI	GTGCAG	3 cut(s)	1672, 2355, 3461
Bsh1236I	CGCG	2 cut(s)	3137, 3473
BshFI	GGCC	4 cut(s)	1132, 1731, 2053, 2754
BshNI	GGYRCC	2 cut(s)	140, 2804
BsiHKAI	GWGCWC	2 cut(s)	3492, 3699
BsiHKCI	CYCGRG	3 cut(s)	1821, 2737, 3366
BsiSI	CCGG	9 cut(s)	588, 603, 630, 669, 1746, 1776, 2045, 2984, 3232
BslFI	GGGAC	1 cut(s)	3101
BslI	CCNNNNNNNGG	5 cut(s)	1061, 1262, 1797, 3197, 3712
BsmAI	GTCTC	9 cut(s)	253, 1027, 1688, 1976, 2219, 2500, 2571, 3005, 3018
BsmBI	CGTCTC	2 cut(s)	1688, 3005
BsmFI	GGGAC	1 cut(s)	3101
BsmI	GAATGC	2 cut(s)	1447, 3557
BsnI	GGCC	4 cut(s)	1132, 1731, 2053, 2754
Bso31I	GGTCTC	2 cut(s)	1027, 2219
BsoBI	CYCGRG	3 cut(s)	1821, 2737, 3366
Bsp119I	TTCGAA	1 cut(s)	703
Bsp1286I	GDGCHC	4 cut(s)	2005, 2809, 3492, 3699
Bsp1720I	GCTNAGC	1 cut(s)	2547
Bsp68I	TCGCGA	1 cut(s)	3473
BspANI	GGCC	4 cut(s)	1132, 1731, 2053, 2754
BspFNI	CGCG	2 cut(s)	3137, 3473
BspHI	TCATGA	4 cut(s)	241, 2689, 3207, 3582
BspLI	GGNNCC	2 cut(s)	142, 2806
BspMI	ACCTGC	1 cut(s)	1357
BspOI	GCTAGC	1 cut(s)	1611
BspPI	GGATC	6 cut(s)	1083, 1247, 2233, 2996, 3010, 3476
BspQI	GCTCTTC	1 cut(s)	163
BspT104I	TTCGAA	1 cut(s)	703
BspT107I	GGYRCC	2 cut(s)	140, 2804
BspTI	CTTAAG	1 cut(s)	773
BspTNI	GGTCTC	2 cut(s)	1027, 2219
BsrBI	CCGCTC	1 cut(s)	3178
BsrDI	GCAATG	2 cut(s)	1710, 1764
BsrFI	RCCGGY	2 cut(s)	668, 3231
BsrI	ACTGG	3 cut(s)	427, 1948, 3422
BssAI	RCCGGY	2 cut(s)	668, 3231
BssECI	CCNNGG	5 cut(s)	2736, 3006, 3019, 3348, 3600
BssNAI	GTATAC	1 cut(s)	768
BssNI	GRCGYC	1 cut(s)	3072
BssSI	CACGAG	1 cut(s)	1998
Bst1107I	GTATAC	1 cut(s)	768
Bst2BI	CACGAG	1 cut(s)	1998
Bst2UI	CCWGG	1 cut(s)	2974
Bst6I	CTCTTC	5 cut(s)	163, 304, 462, 3146, 3296
BstACI	GRCGYC	1 cut(s)	3072
BstAFI	CTTAAG	1 cut(s)	773
BstAPI	GCANNNNNTGC	2 cut(s)	743, 3539
BstBI	TTCGAA	1 cut(s)	703
BstC8I	GCNNGC	6 cut(s)	687, 1265, 1609, 2766, 3233, 3557
BstDSI	CCRYGG	3 cut(s)	3006, 3019, 3600
BstFNI	CGCG	2 cut(s)	3137, 3473
BstH2I	RGCGCY	1 cut(s)	1599
BstHHI	GCGC	5 cut(s)	1354, 1447, 1598, 3137, 3533
BstMAI	GTCTC	9 cut(s)	253, 1027, 1688, 1976, 2219, 2500, 2571, 3005, 3018
BstNI	CCWGG	1 cut(s)	2974
BstNSI	RCATGY	2 cut(s)	321, 3044
BstSCI	CCNGG	3 cut(s)	586, 2972, 2982
BstSFI	CTRYAG	3 cut(s)	2020, 2409, 3501
BstSLI	GKGCMC	2 cut(s)	2005, 2809
BstUI	CGCG	2 cut(s)	3137, 3473
BstV2I	GAAGAC	3 cut(s)	163, 2134, 2185
BstZ17I	GTATAC	1 cut(s)	768
BsuRI	GGCC	4 cut(s)	1132, 1731, 2053, 2754
BtgI	CCRYGG	3 cut(s)	3006, 3019, 3600
BtgZI	GCGATG	3 cut(s)	1565, 3182, 3301
BtsIMutI	CAGTG	5 cut(s)	1662, 1877, 1941, 3400, 3510
BtuMI	TCGCGA	1 cut(s)	3473
BveI	ACCTGC	1 cut(s)	1357
Cac8I	GCNNGC	6 cut(s)	687, 1265, 1609, 2766, 3233, 3557
CaiI	CAGNNNCTG	1 cut(s)	1985
CciI	TCATGA	4 cut(s)	241, 2689, 3207, 3582
CfoI	GCGC	5 cut(s)	1354, 1447, 1598, 3137, 3533
Cfr10I	RCCGGY	2 cut(s)	668, 3231
Cfr13I	GGNCC	3 cut(s)	1659, 2102, 3594
CseI	GACGC	1 cut(s)	1306
Csp6I	GTAC	4 cut(s)	822, 1221, 1818, 2702
CspCI	CAANNNNNGTGG	2 cut(s)	1651, 1686
CviQI	GTAC	4 cut(s)	822, 1221, 1818, 2702
DraI	TTTAAA	2 cut(s)	82, 1102
DraIII	CACNNNGTG	1 cut(s)	2815
DriI	GACNNNNNGTC	1 cut(s)	3071
Eam1104I	CTCTTC	5 cut(s)	163, 304, 462, 3146, 3296
Eam1105I	GACNNNNNGTC	1 cut(s)	3071
EarI	CTCTTC	5 cut(s)	163, 304, 462, 3146, 3296
EciI	GGCGGA	2 cut(s)	3218, 3682
Ecl136II	GAGCTC	1 cut(s)	3697
Eco24I	GRGCYC	1 cut(s)	3699
Eco31I	GGTCTC	2 cut(s)	1027, 2219
Eco47I	GGWCC	3 cut(s)	1659, 2102, 3594
Eco47III	AGCGCT	1 cut(s)	1597
Eco53kI	GAGCTC	1 cut(s)	3697
Eco57I	CTGAAG	4 cut(s)	1132, 1286, 2582, 3426
Eco88I	CYCGRG	3 cut(s)	1821, 2737, 3366
EcoICRI	GAGCTC	1 cut(s)	3697
EcoRI	GAATTC	1 cut(s)	3102
EcoRII	CCWGG	1 cut(s)	2972
EcoT38I	GRGCYC	1 cut(s)	3699
Esp3I	CGTCTC	2 cut(s)	1688, 3005
FaqI	GGGAC	1 cut(s)	3101
FauI	CCCGC	3 cut(s)	517, 784, 1256
FbaI	TGATCA	1 cut(s)	2847
FblI	GTMKAC	2 cut(s)	273, 767
FriOI	GRGCYC	1 cut(s)	3699
FspAI	RTGCGCAY	1 cut(s)	1446
FspI	TGCGCA	1 cut(s)	1446
GlaI	GCGC	5 cut(s)	1353, 1446, 1597, 3136, 3532
GsuI	CTGGAG	5 cut(s)	354, 891, 1965, 2595, 3405
HaeII	RGCGCY	1 cut(s)	1599
HaeIII	GGCC	4 cut(s)	1132, 1731, 2053, 2754
HapII	CCGG	9 cut(s)	588, 603, 630, 669, 1746, 1776, 2045, 2984, 3232
HgaI	GACGC	1 cut(s)	1306
HhaI	GCGC	5 cut(s)	1354, 1447, 1598, 3137, 3533
Hin1I	GRCGYC	1 cut(s)	3072
Hin6I	GCGC	5 cut(s)	1352, 1445, 1596, 3135, 3531
HinP1I	GCGC	5 cut(s)	1352, 1445, 1596, 3135, 3531
HincII	GTYRAC	3 cut(s)	1842, 1884, 2832
HindII	GTYRAC	3 cut(s)	1842, 1884, 2832
HindIII	AAGCTT	3 cut(s)	1632, 2033, 2716
HpaII	CCGG	9 cut(s)	588, 603, 630, 669, 1746, 1776, 2045, 2984, 3232
HphI	GGTGA	6 cut(s)	437, 619, 2034, 2630, 2942, 3605
Hpy99I	CGWCG	3 cut(s)	1042, 1851, 3074
HpyAV	CCTTC	8 cut(s)	1134, 1182, 2473, 2485, 2557, 2615, 3069, 3401
HpyCH4IV	ACGT	4 cut(s)	393, 1498, 2374, 3072
HpySE526I	ACGT	4 cut(s)	393, 1498, 2374, 3072
Hsp92I	GRCGYC	1 cut(s)	3072
HspAI	GCGC	5 cut(s)	1352, 1445, 1596, 3135, 3531
KroI	GCCGGC	1 cut(s)	3231
KroNI	GCCGGC	1 cut(s)	3233
Ksp22I	TGATCA	1 cut(s)	2847
LguI	GCTCTTC	1 cut(s)	163
LmnI	GCTCC	5 cut(s)	1946, 2069, 2914, 3676, 3716
MaeII	ACGT	4 cut(s)	393, 1498, 2374, 3072
MaeIII	GTNAC	6 cut(s)	425, 1108, 1575, 2630, 3410, 3732
MbiI	CCGCTC	1 cut(s)	3178
MfeI	CAATTG	2 cut(s)	690, 1539
MhlI	GDGCHC	4 cut(s)	2005, 2809, 3492, 3699
MlyI	GAGTC	4 cut(s)	1653, 1990, 2502, 2634
MroNI	GCCGGC	1 cut(s)	3231
MroXI	GAANNNNTTC	2 cut(s)	637, 2919
MslI	CAYNNNNRTG	3 cut(s)	1715, 2047, 3650
MspA1I	CMGCKG	2 cut(s)	1263, 1436
MspCI	CTTAAG	1 cut(s)	773
MspI	CCGG	9 cut(s)	588, 603, 630, 669, 1746, 1776, 2045, 2984, 3232
MspR9I	CCNGG	3 cut(s)	588, 2974, 2984
MunI	CAATTG	2 cut(s)	690, 1539
Mva1269I	GAATGC	2 cut(s)	1447, 3557
MvaI	CCWGG	1 cut(s)	2974
MvnI	CGCG	2 cut(s)	3137, 3473
NaeI	GCCGGC	1 cut(s)	3233
NciI	CCSGG	2 cut(s)	588, 2984
NgoMIV	GCCGGC	1 cut(s)	3231
NheI	GCTAGC	1 cut(s)	1607
NlaIV	GGNNCC	2 cut(s)	142, 2806
NmeAIII	GCCGAG	2 cut(s)	706, 2440
NmuCI	GTSAC	2 cut(s)	425, 1108
NruI	TCGCGA	1 cut(s)	3473
NsbI	TGCGCA	1 cut(s)	1446
NspI	RCATGY	2 cut(s)	321, 3044
NspV	TTCGAA	1 cut(s)	703
PaeR7I	CTCGAG	2 cut(s)	1821, 3366
PagI	TCATGA	4 cut(s)	241, 2689, 3207, 3582
PciSI	GCTCTTC	1 cut(s)	163
PcsI	WCGNNNNNNNCGW	2 cut(s)	1852, 1861
PctI	GAATGC	2 cut(s)	1447, 3557
PdiI	GCCGGC	1 cut(s)	3233
PdmI	GAANNNNTTC	2 cut(s)	637, 2919
PflFI	GACNNNGTC	2 cut(s)	431, 1643
PfoI	TCCNGGA	1 cut(s)	586
PleI	GAGTC	4 cut(s)	1652, 1990, 2501, 2633
PpsI	GAGTC	4 cut(s)	1652, 1990, 2501, 2633
PsiI	TTATAA	2 cut(s)	786, 1008
Psp124BI	GAGCTC	1 cut(s)	3699
Psp6I	CCWGG	1 cut(s)	2972
PspGI	CCWGG	1 cut(s)	2972
PspN4I	GGNNCC	2 cut(s)	142, 2806
PspPI	GGNCC	3 cut(s)	1659, 2102, 3594
PspXI	VCTCGAGB	1 cut(s)	3366
PsrI	GAACNNNNNNTAC	2 cut(s)	54, 86
PstNI	CAGNNNCTG	1 cut(s)	1985
PsyI	GACNNNGTC	2 cut(s)	431, 1643
RruI	TCGCGA	1 cut(s)	3473
RsaI	GTAC	4 cut(s)	823, 1222, 1819, 2703
RsaNI	GTAC	4 cut(s)	822, 1221, 1818, 2702
RseI	CAYNNNNRTG	3 cut(s)	1715, 2047, 3650
SacI	GAGCTC	1 cut(s)	3699
SapI	GCTCTTC	1 cut(s)	163
Sau96I	GGNCC	3 cut(s)	1659, 2102, 3594
ScaI	AGTACT	1 cut(s)	1222
SchI	GAGTC	4 cut(s)	1653, 1990, 2502, 2634
ScrFI	CCNGG	3 cut(s)	588, 2974, 2984
SduI	GDGCHC	4 cut(s)	2005, 2809, 3492, 3699
SfcI	CTRYAG	3 cut(s)	2020, 2409, 3501
Sfr274I	CTCGAG	2 cut(s)	1821, 3366
SfuI	TTCGAA	1 cut(s)	703
SgrAI	CRCCGGYG	1 cut(s)	668
SinI	GGWCC	3 cut(s)	1659, 2102, 3594
SlaI	CTCGAG	2 cut(s)	1821, 3366
SmiMI	CAYNNNNRTG	3 cut(s)	1715, 2047, 3650
SmlI	CTYRAG	8 cut(s)	696, 773, 1821, 2030, 2314, 2356, 3366, 3491
SmoI	CTYRAG	8 cut(s)	696, 773, 1821, 2030, 2314, 2356, 3366, 3491
SspI	AATATT	1 cut(s)	1162
SstI	GAGCTC	1 cut(s)	3699
StyD4I	CCNGG	3 cut(s)	586, 2972, 2982
TaiI	ACGT	4 cut(s)	396, 1501, 2377, 3075
TaqI	TCGA	9 cut(s)	703, 968, 1822, 2136, 2337, 3106, 3174, 3309, 3367
TaqII	GACCGA	4 cut(s)	1051, 2004, 2944, 3254
TatI	WGTACW	2 cut(s)	821, 1220
TauI	GCSGC	2 cut(s)	1001, 3374
TscAI	CASTG	5 cut(s)	1669, 1884, 1948, 3400, 3510
TseFI	GTSAC	2 cut(s)	425, 1108
Tsp45I	GTSAC	2 cut(s)	425, 1108
TspGWI	ACGGA	1 cut(s)	3008
TspRI	CASTG	5 cut(s)	1669, 1884, 1948, 3400, 3510
Tth111I	GACNNNGTC	2 cut(s)	431, 1643
Vha464I	CTTAAG	1 cut(s)	773
VpaK11BI	GGWCC	3 cut(s)	1659, 2102, 3594
XapI	RAATTY	3 cut(s)	104, 1269, 3102
XbaI	TCTAGA	2 cut(s)	251, 3514
XceI	RCATGY	2 cut(s)	321, 3044
XhoI	CTCGAG	2 cut(s)	1821, 3366
XmiI	GTMKAC	2 cut(s)	273, 767
XmnI	GAANNNNTTC	2 cut(s)	637, 2919
ZraI	GACGTC	1 cut(s)	3073
ZrmI	AGTACT	1 cut(s)	1222

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.