Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2B

Orthogroup ID

OG0009778

Physical Location & Seq

Genomic Coordinates Forward (+)

84169914 .. 84177547

Gene Structure 7634 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2BG619000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2640 bp

ATGGCTGACACCACAGAGCCAACCAAGACATTGCCGGAGGCAGAGAAAAAGAAAGAACAGAGCTTGCCGTTTTACCAGCTCTTCTCCTTTGCTGACAAGTATGATTGCCTCCTCATGGTCTCTGGCAGCATAGGAGCCATAATTCACGGCTCTTCTATGCCCGTGTTCTTCCTCTTATTTGGTGAAATGGTTAATGGGTTCGGCAAAAACCAAATGAATCTGCAGAAAATGACCGCCGAAGTAGCCAAGTATGCTCTGTATTTTGTGTATCTCGGCCTGATCGTCTGCTTCTCATCCTACGCCGAGATTGCATGCTGGATGTACACCGGAGAAAGACAAGTGAGCACTCTGAGGAAGAAGTATCTGGAAGCCGTGCTTAAACAAGACGTGGGGTTTTTCGACACGGATGCCAGAACAGGTGACATAGTCTTCAGCGTCTCGACGGACACCCTTCTGGTCCAAGATGCCATTAGCGAGAAGGTGGGGAACTTCATACACTATCTCTCAACATTTCTGGCGGGACTGGTGGTTGGGTTTGTATCAGCATGGAGGCTGGCGCTGCTGAGTGTGGCAGTCATCCCGGGGATTGCTTTTGCTGGCGGGTTGTATGCTTATACGCTTACAGGGCTCACATCCAAGAGCCGAGAATCGTATGCAAATGCGGGCATTATGGCTGAGCAAGCCATTGCACAAGTACGGACAGTTAAATCATATGTTGGTGAAAGCAAGGCCCTGAATTCGTATTCAGATGCCATACAGAACACCTTGCAGCTTGGTTACAAGGCCGGAATGGCCAAAGGTCTGGGGTTAGGGTGTACCTATGGCATAGCTTGTATGTCGTGGGCTCTTGTTTTCTGGTATGCCGGTGTGTTTATCCGAAATGGACAGACTGATGGAGGGAAAGCATTCACAGCCATTTTTTCAGCTATTGTTGGTGGCATGAGCTTGGGTCAGTCATTTTCCAATCTTGGGGCCTTTAGCAAAGGTAAATCAGCTGGATACAAGTTGATGGAGATTATTAGGCAAAAGCCCACCATAATTCAGGACCAGTTGGATGGAAAGTGCTTGTCTGAGGTTAAAGGAAACATAGAACTCAAGGAGGTGACATTCAGCTACCCATCCAGGCCAGATGTTATCATTTTCCGAAATTTTTCAATCTTCTTCCCAGCTGGAAAGACTGTTGCCGTTGTTGGAGGCAGTGGTTCAGGGAAAAGCACCGTTGTCTCTCTGATTGAAAGGTTTTACGATCCTAACCAGGGTCAGGTATTGCTGGATGGTGTGGACATAAGAACACTGCAGCTGAAATGGTTACGTGATCAGATGGGCCTGGTAAACCAGGAGCCTGCACTCTTTGCTACTACCATTCTTGAGAACATACTCTATGGAAAGCCTGATGCAACAATGGATGAAGTAGAAGCTGCAGCCTCTGCAGCTAATGCTCATAGTTTCATCACTTTGCTTCCTAATGGGTATAACACTCAGGTAGGAGAGCGAGGAGTCCAACTCTCTGGAGGTCAAAAACAGAGAATTGCAATTGCTAGAGCTATGTTGAAAGACCCAAAGATCCTGCTTCTTGATGAAGCAACCAGCGCCCTTGATGCAAGCTCTGAGAGCATTGTTCAAGAAGCTCTTGATCGTCTCATGGTTGGGAGGACAACTGTAGTTGTGGCACATCGCCTTTCCACCATAAGGAATGTTGACAGCATTGCAGTTATACAACAAGGGCAAGTTGTTGAGACAGGAACTCATGAAGAACTGATTGCCAAAGCAGGGGCTTATTCTTCATTAATTCGGTTCCAAGAAATGGTTGGAAACAGAGACTTCAGGAATCCATCTACTCGTTGTTCACGATCATCACGACTAAGCCACTCATTGTCAACCAAGTCTTTGAGCCTCCGGTCTGGCAGCTTAAGGAACCTGAGCTACCAGTACAGTACTGGTGCTGATGGGAGGATAGAGATGATTTCAAATGCTGAGACAGACAGGAAAACTCGAGCTCCAAGGGGATATTTCTTTCGGCTTCTCACGCTAAATGCTCCTGAATGGCCTTATTCAATCATGGGTGCCATAGGATCAGTACTGTCCGGGTTTATCGGTCCAACCTTTGCTATTGTAATGAGCAACATGATTGAGGTGTTCTATTATAGAAATCCTGCTTCCATGGAGAGGAAGACAAAGGAGTATGTCTTCATTTACATAGGAGCTGGGCTCTATGCTGTAGTTGCATATTTGATACAACATTACTTCTTCAGCATAATGGGAGAGAACCTCACTACTAGAGTAAGGAGGATGATGCTTGCAGCAATTTTAAGGAACGAAGTCGGATGGTATGATGAAGAGGAGAACAACTCGAGTCTTCTAGCCTCAAAACTGGCCACAGATGCTGCTGATGTGAAATCCGCAATTGCTGAGAGGATTTCTGTGATTCTGCAGAACATGACTTCACTGCTCACTTCATTCATAGTTGCTTTCATTGTGGAATGGAGGGTCTCCCTACTTATCCTAGCAACCTTTCCTCTTTTGGTTCTTGCCAACTTTGCTCAGGTAAGCTTTCAGTTACAGCCTTCACTAACCAAACCATTTTGCTTTGAAAAATACCAAGCTTTTCTCTTGAATGGTCTCGGTTTAATACTATTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0007275 GO:0008150 GO:0008361 GO:0009314 GO:0009411 GO:0009416 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009637 GO:0009639 GO:0009640 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009791 GO:0009908 GO:0009914 GO:0009926 GO:0009958 GO:0009966 GO:0009987 GO:0010033 GO:0010218 GO:0010315 GO:0010329 GO:0010540 GO:0010541 GO:0010646 GO:0010817 GO:0010928 GO:0015562 GO:0016020 GO:0016043 GO:0022414 GO:0022622 GO:0022857 GO:0023051 GO:0032501 GO:0032502 GO:0032535 GO:0042221 GO:0043473 GO:0043476 GO:0043478 GO:0043479 GO:0043480 GO:0043481 GO:0044464 GO:0048364 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048527 GO:0048528 GO:0048583 GO:0048608 GO:0048646 GO:0048731 GO:0048827 GO:0048856 GO:0048859 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0060918 GO:0061458 GO:0065007 GO:0065008 GO:0071840 GO:0071944 GO:0080161 GO:0090066 GO:0090567 GO:0090691 GO:0090696 GO:0099402

KEGG Pathways

Metabolic & Signaling

ko02010 ko04976 ko05206 ko05226 map02010 map04976 map05206 map05226

Pfam Domains

Protein Families

ABC_membrane ABC_tran

Protein Analysis

879

Amino Acids

96.54

Weight (kDa)

8.67

Isoelectric Point (pI)

34.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_membrane	PF00664	44 - 312	1.7e-55	ABC transporter transmembrane region
ABC_tran	PF00005	382 - 530	9.4e-32	ABC transporter
ABC_membrane	PF00664	686 - 848	1.7e-29	ABC transporter transmembrane region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009778)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G28860
fragaria_vesca	FvH4_6g48960 FvH4_6g48960 FvH4_6g48960 FvH4_6g48960 FvH4_6g48960
malus_domestica	MD09G1049400.v1.1 MD17G1049500.v1.1 MD17G1049600.v1.1
prunus_persica	Prupe.3G269400_v2.0.a1 Prupe.3G269400_v2.0.a1
pyrus_communis	pycom111g04040 pycom17g04450
rosa_chinensis	RchiOBHm_Chr2g0168761
rosa_laevigata	RLG00000021808
rosa_multiflora	Rmu_ssc0000393.1_g000001
rosa_roxburghii	Rroxscaffold_2G00082690
rosa_rugosa	Rorug02G0535300
rosa_samantha	Rh2BG619000 Rh2DG629700
rosa_wichuraiana	Rw2G050250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	2063
AccB7I	CCANNNNNTGG	1 cut(s)	1804
AciI	CCGC	5 cut(s)	234, 518, 600, 662, 2400
AclWI	GGATC	3 cut(s)	1241, 1558, 2080
AcoI	YGGCCR	2 cut(s)	792, 2373
AcsI	RAATTY	2 cut(s)	736, 1147
AcuI	CTGAAG	3 cut(s)	415, 1807, 2233
AfaI	GTAC	6 cut(s)	323, 696, 817, 1931, 1936, 2079
AfiI	CCNNNNNNNGG	8 cut(s)	115, 969, 1256, 1261, 1689, 1770, 1804, 2166
AflII	CTTAAG	1 cut(s)	1909
AgsI	TTSAA	8 cut(s)	1155, 1235, 1552, 1622, 1968, 2055, 2591, 2614
AjiI	CACGTC	1 cut(s)	388
AjnI	CCWGG	4 cut(s)	1121, 1254, 1326, 1335
Alw21I	GWGCWC	2 cut(s)	347, 1999
Alw26I	GTCTC	9 cut(s)	124, 442, 1228, 1643, 1730, 1812, 1970, 2494, 2624
AlwI	GGATC	3 cut(s)	1241, 1558, 2080
AlwNI	CAGNNNCTG	2 cut(s)	1427, 2384
Ama87I	CYCGRG	3 cut(s)	580, 1992, 2350
AoxI	GGCC	9 cut(s)	274, 729, 783, 792, 972, 1124, 1324, 2045, 2373
ApoI	RAATTY	2 cut(s)	736, 1147
AseI	ATTAAT	1 cut(s)	1787
Asp700I	GAANNNNTTC	2 cut(s)	905, 1150
AspLEI	GCGC	2 cut(s)	559, 1592
AspS9I	GGNCC	6 cut(s)	457, 730, 972, 1045, 1324, 2096
AsuC2I	CCSGG	3 cut(s)	581, 582, 2086
AsuHPI	GGTGA	4 cut(s)	194, 431, 731, 1114
AvaI	CYCGRG	3 cut(s)	580, 1992, 2350
AvaII	GGWCC	3 cut(s)	457, 1045, 2096
BalI	TGGCCA	2 cut(s)	794, 2375
BanI	GGYRCC	1 cut(s)	2063
BanII	GRGCYC	4 cut(s)	630, 847, 1999, 2211
BbsI	GAAGAC	4 cut(s)	421, 2177, 2179, 2348
Bbv12I	GWGCWC	2 cut(s)	347, 1999
BccI	CCATC	9 cut(s)	887, 1003, 1049, 1126, 1268, 1315, 1840, 1940, 2319
BceAI	ACGGC	4 cut(s)	52, 163, 356, 1169
BcgI	CGANNNNNNTGC	2 cut(s)	389, 423
BciT130I	CCWGG	4 cut(s)	1123, 1256, 1328, 1337
BciVI	GTATCC	1 cut(s)	992
BclI	TGATCA	1 cut(s)	1315
BcnI	CCSGG	3 cut(s)	581, 582, 2086
BcoDI	GTCTC	9 cut(s)	124, 442, 1228, 1643, 1730, 1812, 1970, 2494, 2624
BfaI	CTAG	4 cut(s)	1539, 2277, 2360, 2504
BfmI	CTRYAG	7 cut(s)	221, 1295, 1419, 1428, 1659, 2217, 2429
BfoI	RGCGCY	2 cut(s)	560, 1593
BfrI	CTTAAG	1 cut(s)	1909
BfuI	GTATCC	1 cut(s)	992
BglI	GCCNNNNNGGC	1 cut(s)	791
BlpI	GCTNAGC	1 cut(s)	675
BmcAI	AGTACT	2 cut(s)	1936, 2079
Bme1390I	CCNGG	7 cut(s)	581, 582, 1123, 1256, 1328, 1337, 2086
Bme18I	GGWCC	3 cut(s)	457, 1045, 2096
BmeT110I	CYCGRG	3 cut(s)	580, 1992, 2350
BmgBI	CACGTC	1 cut(s)	388
BmgT120I	GGNCC	6 cut(s)	457, 730, 972, 1045, 1324, 2096
BmiI	GGNNCC	6 cut(s)	136, 973, 1341, 1796, 1916, 2065
BmrFI	CCNGG	7 cut(s)	581, 582, 1123, 1256, 1328, 1337, 2086
BmsI	GCATC	7 cut(s)	397, 454, 739, 1384, 1588, 2283, 2371
BpiI	GAAGAC	4 cut(s)	421, 2177, 2179, 2348
BplI	GAGNNNNNCTC	8 cut(s)	1488, 1520, 2193, 2225, 2253, 2285, 2333, 2365
BpmI	CTGGAG	1 cut(s)	1530
Bpu10I	CCTNAGC	2 cut(s)	1919, 2541
Bpu1102I	GCTNAGC	1 cut(s)	675
BpuEI	CTTGAG	2 cut(s)	1079, 1388
BpuMI	CCSGG	3 cut(s)	581, 582, 2086
BsaAI	YACGTR	1 cut(s)	1313
BsaI	GGTCTC	3 cut(s)	124, 2494, 2624
BsaJI	CCNNGG	5 cut(s)	580, 581, 1255, 2000, 2160
BsaWI	WCCGGW	2 cut(s)	326, 1896
BsaXI	ACNNNNNCTCC	2 cut(s)	1981, 2011
Bsc4I	CCNNNNNNNGG	8 cut(s)	115, 969, 1256, 1261, 1689, 1770, 1804, 2166
Bse118I	RCCGGY	1 cut(s)	863
Bse1I	ACTGG	5 cut(s)	528, 1048, 1927, 1942, 2376
Bse3DI	GCAATG	3 cut(s)	29, 684, 1704
BseBI	CCWGG	4 cut(s)	1123, 1256, 1328, 1337
BseDI	CCNNGG	5 cut(s)	580, 581, 1255, 2000, 2160
BseLI	CCNNNNNNNGG	8 cut(s)	115, 969, 1256, 1261, 1689, 1770, 1804, 2166
BseMI	GCAATG	3 cut(s)	29, 684, 1704
BseNI	ACTGG	5 cut(s)	528, 1048, 1927, 1942, 2376
BseRI	GAGGAG	3 cut(s)	101, 1509, 2354
BseYI	CCCAGC	2 cut(s)	1165, 2204
BsgI	GTGCAG	1 cut(s)	1329
BshFI	GGCC	9 cut(s)	276, 731, 785, 794, 974, 1126, 1326, 2047, 2375
BshNI	GGYRCC	1 cut(s)	2063
BsiHKAI	GWGCWC	2 cut(s)	347, 1999
BsiHKCI	CYCGRG	3 cut(s)	580, 1992, 2350
BsiSI	CCGG	7 cut(s)	35, 327, 581, 786, 864, 1897, 2085
BslFI	GGGAC	1 cut(s)	534
BslI	CCNNNNNNNGG	8 cut(s)	115, 969, 1256, 1261, 1689, 1770, 1804, 2166
BsmAI	GTCTC	9 cut(s)	124, 442, 1228, 1643, 1730, 1812, 1970, 2494, 2624
BsmBI	CGTCTC	2 cut(s)	442, 1643
BsmFI	GGGAC	1 cut(s)	534
BsmI	GAATGC	1 cut(s)	905
BsnI	GGCC	9 cut(s)	276, 731, 785, 794, 974, 1126, 1326, 2047, 2375
Bso31I	GGTCTC	3 cut(s)	124, 2494, 2624
BsoBI	CYCGRG	3 cut(s)	580, 1992, 2350
Bsp1286I	GDGCHC	5 cut(s)	347, 630, 847, 1999, 2211
Bsp1407I	TGTACA	1 cut(s)	321
Bsp143I	GATC	7 cut(s)	279, 1246, 1315, 1563, 1633, 1850, 2072
Bsp1720I	GCTNAGC	1 cut(s)	675
Bsp19I	CCATGG	1 cut(s)	2160
BspACI	CCGC	5 cut(s)	234, 518, 600, 662, 2400
BspANI	GGCC	9 cut(s)	276, 731, 785, 794, 974, 1126, 1326, 2047, 2375
BspHI	TCATGA	1 cut(s)	1747
BspLI	GGNNCC	6 cut(s)	136, 973, 1341, 1796, 1916, 2065
BspMAI	CTGCAG	5 cut(s)	225, 1299, 1423, 1432, 2433
BspPI	GGATC	3 cut(s)	1241, 1558, 2080
BspQI	GCTCTTC	2 cut(s)	86, 157
BspT107I	GGYRCC	1 cut(s)	2063
BspTI	CTTAAG	1 cut(s)	1909
BspTNI	GGTCTC	3 cut(s)	124, 2494, 2624
BsrDI	GCAATG	3 cut(s)	29, 684, 1704
BsrFI	RCCGGY	1 cut(s)	863
BsrGI	TGTACA	1 cut(s)	321
BsrI	ACTGG	5 cut(s)	528, 1048, 1927, 1942, 2376
BssAI	RCCGGY	1 cut(s)	863
BssECI	CCNNGG	5 cut(s)	580, 581, 1255, 2000, 2160
BssMI	GATC	7 cut(s)	279, 1246, 1315, 1563, 1633, 1850, 2072
BssT1I	CCWWGG	2 cut(s)	2000, 2160
Bst2UI	CCWGG	4 cut(s)	1123, 1256, 1328, 1337
Bst4CI	ACNGT	6 cut(s)	703, 1180, 1219, 1660, 1934, 2082
Bst6I	CTCTTC	3 cut(s)	86, 157, 2331
BstAFI	CTTAAG	1 cut(s)	1909
BstAPI	GCANNNNNTGC	3 cut(s)	1352, 1427, 1436
BstAUI	TGTACA	1 cut(s)	321
BstBAI	YACGTR	1 cut(s)	1313
BstC8I	GCNNGC	9 cut(s)	65, 313, 555, 598, 664, 681, 1344, 1603, 2298
BstDSI	CCRYGG	1 cut(s)	2160
BstH2I	RGCGCY	2 cut(s)	560, 1593
BstHHI	GCGC	2 cut(s)	559, 1592
BstKTI	GATC	7 cut(s)	282, 1249, 1318, 1566, 1636, 1853, 2075
BstMAI	GTCTC	9 cut(s)	124, 442, 1228, 1643, 1730, 1812, 1970, 2494, 2624
BstMBI	GATC	7 cut(s)	279, 1246, 1315, 1563, 1633, 1850, 2072
BstNI	CCWGG	4 cut(s)	1123, 1256, 1328, 1337
BstNSI	RCATGY	1 cut(s)	315
BstSCI	CCNGG	7 cut(s)	579, 580, 1121, 1254, 1326, 1335, 2084
BstSFI	CTRYAG	7 cut(s)	221, 1295, 1419, 1428, 1659, 2217, 2429
BstV2I	GAAGAC	4 cut(s)	421, 2177, 2179, 2348
BstX2I	RGATCY	1 cut(s)	1563
BstXI	CCANNNNNNTGG	3 cut(s)	802, 1055, 1508
BstYI	RGATCY	1 cut(s)	1563
BsuI	GTATCC	1 cut(s)	992
BsuRI	GGCC	9 cut(s)	276, 731, 785, 794, 974, 1126, 1326, 2047, 2375
BtgI	CCRYGG	1 cut(s)	2160
BtgZI	GCGATG	1 cut(s)	1658
BtrI	CACGTC	1 cut(s)	388
BtsI	GCAGTG	3 cut(s)	1204, 1292, 2444
BtsIMutI	CAGTG	3 cut(s)	1204, 1292, 2444
Cac8I	GCNNGC	9 cut(s)	65, 313, 555, 598, 664, 681, 1344, 1603, 2298
CaiI	CAGNNNCTG	2 cut(s)	1427, 2384
CciI	TCATGA	1 cut(s)	1747
CfoI	GCGC	2 cut(s)	559, 1592
Cfr10I	RCCGGY	1 cut(s)	863
Cfr13I	GGNCC	6 cut(s)	457, 730, 972, 1045, 1324, 2096
Cfr9I	CCCGGG	1 cut(s)	580
CseI	GACGC	1 cut(s)	424
Csp6I	GTAC	6 cut(s)	322, 695, 816, 1930, 1935, 2078
CviQI	GTAC	6 cut(s)	322, 695, 816, 1930, 1935, 2078
DpnI	GATC	7 cut(s)	281, 1248, 1317, 1565, 1635, 1852, 2074
DpnII	GATC	7 cut(s)	279, 1246, 1315, 1563, 1633, 1850, 2072
EaeI	YGGCCR	2 cut(s)	792, 2373
Eam1104I	CTCTTC	3 cut(s)	86, 157, 2331
EarI	CTCTTC	3 cut(s)	86, 157, 2331
Ecl136II	GAGCTC	1 cut(s)	1997
Eco130I	CCWWGG	2 cut(s)	2000, 2160
Eco24I	GRGCYC	4 cut(s)	630, 847, 1999, 2211
Eco31I	GGTCTC	3 cut(s)	124, 2494, 2624
Eco47I	GGWCC	3 cut(s)	457, 1045, 2096
Eco53kI	GAGCTC	1 cut(s)	1997
Eco57I	CTGAAG	3 cut(s)	415, 1807, 2233
Eco88I	CYCGRG	3 cut(s)	580, 1992, 2350
EcoICRI	GAGCTC	1 cut(s)	1997
EcoO109I	RGGNCCY	2 cut(s)	730, 972
EcoRI	GAATTC	1 cut(s)	736
EcoRII	CCWGG	4 cut(s)	1121, 1254, 1326, 1335
EcoT14I	CCWWGG	2 cut(s)	2000, 2160
EcoT38I	GRGCYC	4 cut(s)	630, 847, 1999, 2211
ErhI	CCWWGG	2 cut(s)	2000, 2160
Esp3I	CGTCTC	2 cut(s)	442, 1643
FalI	AAGNNNNNCTT	4 cut(s)	360, 392, 1614, 1646
FaqI	GGGAC	1 cut(s)	534
FauI	CCCGC	3 cut(s)	511, 593, 655
FauNDI	CATATG	1 cut(s)	712
FbaI	TGATCA	1 cut(s)	1315
FriOI	GRGCYC	4 cut(s)	630, 847, 1999, 2211
FspBI	CTAG	4 cut(s)	1539, 2277, 2360, 2504
GlaI	GCGC	2 cut(s)	558, 1591
GsaI	CCCAGC	2 cut(s)	1169, 2208
GsuI	CTGGAG	1 cut(s)	1530
HaeII	RGCGCY	2 cut(s)	560, 1593
HaeIII	GGCC	9 cut(s)	276, 731, 785, 794, 974, 1126, 1326, 2047, 2375
HapII	CCGG	7 cut(s)	35, 327, 581, 786, 864, 1897, 2085
HgaI	GACGC	1 cut(s)	424
HhaI	GCGC	2 cut(s)	559, 1592
Hin6I	GCGC	2 cut(s)	557, 1590
HinP1I	GCGC	2 cut(s)	557, 1590
HincII	GTYRAC	2 cut(s)	1699, 1878
HindII	GTYRAC	2 cut(s)	1699, 1878
HindIII	AAGCTT	2 cut(s)	2548, 2601
HinfI	GANTC	6 cut(s)	217, 647, 1497, 1828, 2353, 2425
HpaII	CCGG	7 cut(s)	35, 327, 581, 786, 864, 1897, 2085
HphI	GGTGA	4 cut(s)	194, 431, 731, 1114
Hpy166II	GTNNAC	7 cut(s)	324, 816, 1282, 1333, 1699, 1847, 1878
Hpy188I	TCNGA	9 cut(s)	351, 748, 878, 1072, 1145, 1230, 1320, 1609, 2324
Hpy8I	GTNNAC	7 cut(s)	324, 816, 1282, 1333, 1699, 1847, 1878
Hpy99I	CGWCG	1 cut(s)	445
HpyAV	CCTTC	3 cut(s)	461, 472, 2574
HpyCH4III	ACNGT	6 cut(s)	703, 1180, 1219, 1660, 1934, 2082
HpyCH4IV	ACGT	2 cut(s)	387, 1312
HpySE526I	ACGT	2 cut(s)	387, 1312
HspAI	GCGC	2 cut(s)	557, 1590
Ksp22I	TGATCA	1 cut(s)	1315
Kzo9I	GATC	7 cut(s)	279, 1246, 1315, 1563, 1633, 1850, 2072
LguI	GCTCTTC	2 cut(s)	86, 157
LmnI	GCTCC	5 cut(s)	134, 1339, 2002, 2041, 2201
LweI	GCATC	7 cut(s)	397, 454, 739, 1384, 1588, 2283, 2371
MaeI	CTAG	4 cut(s)	1539, 2277, 2360, 2504
MaeII	ACGT	2 cut(s)	387, 1312
MaeIII	GTNAC	5 cut(s)	419, 776, 1102, 1308, 2556
MalI	GATC	7 cut(s)	281, 1248, 1317, 1565, 1635, 1852, 2074
MboI	GATC	7 cut(s)	279, 1246, 1315, 1563, 1633, 1850, 2072
MfeI	CAATTG	2 cut(s)	1533, 2403
MflI	RGATCY	1 cut(s)	1563
MhlI	GDGCHC	5 cut(s)	347, 630, 847, 1999, 2211
MlsI	TGGCCA	2 cut(s)	794, 2375
MluCI	AATT	9 cut(s)	141, 736, 1038, 1147, 1527, 1533, 1788, 2304, 2403
MluNI	TGGCCA	2 cut(s)	794, 2375
MlyI	GAGTC	2 cut(s)	1506, 2362
MmeI	TCCRAC	6 cut(s)	1032, 1171, 1525, 1789, 2123, 2302
Mox20I	TGGCCA	2 cut(s)	794, 2375
MroXI	GAANNNNTTC	2 cut(s)	905, 1150
MscI	TGGCCA	2 cut(s)	794, 2375
MseI	TTAA	9 cut(s)	192, 378, 705, 1077, 1787, 1910, 2309, 2627, 2638
Msp20I	TGGCCA	2 cut(s)	794, 2375
MspA1I	CMGCKG	3 cut(s)	995, 1169, 1300
MspCI	CTTAAG	1 cut(s)	1909
MspI	CCGG	7 cut(s)	35, 327, 581, 786, 864, 1897, 2085
MspR9I	CCNGG	7 cut(s)	581, 582, 1123, 1256, 1328, 1337, 2086
MunI	CAATTG	2 cut(s)	1533, 2403
Mva1269I	GAATGC	1 cut(s)	905
MvaI	CCWGG	4 cut(s)	1123, 1256, 1328, 1337
NciI	CCSGG	3 cut(s)	581, 582, 2086
NcoI	CCATGG	1 cut(s)	2160
NdeI	CATATG	1 cut(s)	712
NdeII	GATC	7 cut(s)	279, 1246, 1315, 1563, 1633, 1850, 2072
NlaIV	GGNNCC	6 cut(s)	136, 973, 1341, 1796, 1916, 2065
NmeAIII	GCCGAG	3 cut(s)	252, 328, 668
NmuCI	GTSAC	2 cut(s)	419, 1102
NspI	RCATGY	1 cut(s)	315
PaeI	GCATGC	1 cut(s)	315
PaeR7I	CTCGAG	2 cut(s)	1992, 2350
PagI	TCATGA	1 cut(s)	1747
PciSI	GCTCTTC	2 cut(s)	86, 157
PcsI	WCGNNNNNNNCGW	3 cut(s)	279, 1846, 1855
PctI	GAATGC	1 cut(s)	905
PdmI	GAANNNNTTC	2 cut(s)	905, 1150
PfeI	GAWTC	4 cut(s)	217, 647, 1828, 2425
PflFI	GACNNNGTC	1 cut(s)	425
PflMI	CCANNNNNTGG	1 cut(s)	1804
PleI	GAGTC	2 cut(s)	1505, 2361
PpsI	GAGTC	2 cut(s)	1505, 2361
Ppu21I	YACGTR	1 cut(s)	1313
PshBI	ATTAAT	1 cut(s)	1787
Psp124BI	GAGCTC	1 cut(s)	1999
Psp6I	CCWGG	4 cut(s)	1121, 1254, 1326, 1335
PspFI	CCCAGC	2 cut(s)	1165, 2204
PspGI	CCWGG	4 cut(s)	1121, 1254, 1326, 1335
PspN4I	GGNNCC	6 cut(s)	136, 973, 1341, 1796, 1916, 2065
PspPI	GGNCC	6 cut(s)	457, 730, 972, 1045, 1324, 2096
PspXI	VCTCGAGB	2 cut(s)	1992, 2350
PsrI	GAACNNNNNNTAC	2 cut(s)	1907, 1939
PstI	CTGCAG	5 cut(s)	225, 1299, 1423, 1432, 2433
PstNI	CAGNNNCTG	2 cut(s)	1427, 2384
PsuI	RGATCY	1 cut(s)	1563
PsyI	GACNNNGTC	1 cut(s)	425
PvuII	CAGCTG	3 cut(s)	995, 1169, 1300
RsaI	GTAC	6 cut(s)	323, 696, 817, 1931, 1936, 2079
RsaNI	GTAC	6 cut(s)	322, 695, 816, 1930, 1935, 2078
SacI	GAGCTC	1 cut(s)	1999
SapI	GCTCTTC	2 cut(s)	86, 157
SaqAI	TTAA	9 cut(s)	192, 378, 705, 1077, 1787, 1910, 2309, 2627, 2638
Sau3AI	GATC	7 cut(s)	279, 1246, 1315, 1563, 1633, 1850, 2072
Sau96I	GGNCC	6 cut(s)	457, 730, 972, 1045, 1324, 2096
ScaI	AGTACT	2 cut(s)	1936, 2079
SchI	GAGTC	2 cut(s)	1506, 2362
ScrFI	CCNGG	7 cut(s)	581, 582, 1123, 1256, 1328, 1337, 2086
SduI	GDGCHC	5 cut(s)	347, 630, 847, 1999, 2211
SfaNI	GCATC	7 cut(s)	397, 454, 739, 1384, 1588, 2283, 2371
SfcI	CTRYAG	7 cut(s)	221, 1295, 1419, 1428, 1659, 2217, 2429
SfiI	GGCCNNNNNGGCC	1 cut(s)	791
Sfr274I	CTCGAG	2 cut(s)	1992, 2350
SinI	GGWCC	3 cut(s)	457, 1045, 2096
SlaI	CTCGAG	2 cut(s)	1992, 2350
SmaI	CCCGGG	1 cut(s)	582
SmlI	CTYRAG	5 cut(s)	1094, 1367, 1909, 1992, 2350
SmoI	CTYRAG	5 cut(s)	1094, 1367, 1909, 1992, 2350
SphI	GCATGC	1 cut(s)	315
Sse9I	AATT	9 cut(s)	141, 736, 1038, 1147, 1527, 1533, 1788, 2304, 2403
SsiI	CCGC	5 cut(s)	234, 518, 600, 662, 2400
SspMI	CTAG	4 cut(s)	1539, 2277, 2360, 2504
SstI	GAGCTC	1 cut(s)	1999
StyD4I	CCNGG	7 cut(s)	579, 580, 1121, 1254, 1326, 1335, 2084
StyI	CCWWGG	2 cut(s)	2000, 2160
TaaI	ACNGT	6 cut(s)	703, 1180, 1219, 1660, 1934, 2082
TaiI	ACGT	2 cut(s)	390, 1315
TaqI	TCGA	4 cut(s)	399, 440, 1993, 2351
TaqII	GACCGA	1 cut(s)	2084
TasI	AATT	9 cut(s)	141, 736, 1038, 1147, 1527, 1533, 1788, 2304, 2403
TatI	WGTACW	4 cut(s)	321, 1929, 1934, 2077
TfiI	GAWTC	4 cut(s)	217, 647, 1828, 2425
Tru1I	TTAA	9 cut(s)	192, 378, 705, 1077, 1787, 1910, 2309, 2627, 2638
Tru9I	TTAA	9 cut(s)	192, 378, 705, 1077, 1787, 1910, 2309, 2627, 2638
TscAI	CASTG	3 cut(s)	1204, 1299, 2451
TseFI	GTSAC	2 cut(s)	419, 1102
Tsp45I	GTSAC	2 cut(s)	419, 1102
TspGWI	ACGGA	3 cut(s)	419, 458, 712
TspMI	CCCGGG	1 cut(s)	580
TspRI	CASTG	3 cut(s)	1204, 1299, 2451
Tth111I	GACNNNGTC	1 cut(s)	425
Van91I	CCANNNNNTGG	1 cut(s)	1804
Vha464I	CTTAAG	1 cut(s)	1909
VpaK11BI	GGWCC	3 cut(s)	457, 1045, 2096
VspI	ATTAAT	1 cut(s)	1787
XapI	RAATTY	2 cut(s)	736, 1147
XceI	RCATGY	1 cut(s)	315
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1805, 1934
XhoI	CTCGAG	2 cut(s)	1992, 2350
XmaI	CCCGGG	1 cut(s)	580
XmnI	GAANNNNTTC	2 cut(s)	905, 1150
XspI	CTAG	4 cut(s)	1539, 2277, 2360, 2504
ZrmI	AGTACT	2 cut(s)	1936, 2079

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.