FvH4_6g48960

ABC transporter B family member

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Forward (+)
36750948 .. 36758609
7662 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g48960.t2

Sequence Viewer

Length: 3753 bp
ATGGCTGAGAGCACAGAGCCAACCAAGACACTGCCGGAGGCAGAGAAGAAGAAAGAGCAGAGCCTACCGTTCTACCAGCTCTTCTCTTTTGCTGACAAGTATGATTGCCTTCTCATGGTCTCCGGCAGCATAGGAGCCATCATTCACGGCTCTTCCATGCCCGTGTTCTTCTTATTGTTCGGTGAAATGGTTAATGGGTTCGGAAAAAACCAGATGGACTTGCACAAAATGACGGCCGAAGTTGCCAAGTATGCTCTGTATTTCGTCTACCTCGGCCTCATCGTGTGCGTGTCATCCTACGCCGAGATTGCATGCTGGATGTACACCGGAGAAAGACAAGTGAGCACTCTGAGGAAGAAGTATCTGGAAGCGGTGCTGAAACAAGACGTGGGGTTTTTCGACACAGATGCAAGAACAGGTGACATAGTCTTCAGCGTCTCGACGGACACCCTTCTGGTCCAAGATGCCATTAGTGAGAAGGTGGGGAACTTCATACACTATCTTTCAACGTTTCTGGCGGGACTGGTGGTTGGGTTTGTGTCAGCATGGAGGCTGGCTCTGCTGAGTGTGGCAGTCATCCCGGGGATTGCTTTTGCCGGCGGGTTGTATGCCTATACGCTTACAGGGCTCACATCCAAGAGCCGAGAATCGTATGCAAATGCTGGCATTATGGCTGAGCAAGCCATCGCACAAGTTCGAACAGTTAAATCATATGTGGGTGAAAGCAAGGCCTTGAATTCCTATTCAGATGCCATACAGAACACCTTGCAGCTTGGTTACAAGGCTGGAATGGCCAAAGGTCTGGGGTTAGGGTGTACCTATGGCATAGCTTGTATGTCGTGGGCTCTTGTTTTCTGGTATGCTGGTGTGTTTATTCGAAATGGGCAGACTGATGGAGGGAAAGCATTCACAGCCATTTTTTCGGCTATTGTTGGTGGCATGAGCTTGGGTCAGTCATTTTCCAATCTCGGGGCCTTTAGCAAAGGGAAATCAGCTGGATACAAGTTGATGGAGATCATCAAGCAAAAGCCCACCATAATTCAGGACCAATTGGATGGAAAGTGCTTGTCCGAGGTTAATGGAAACATAGAACTCAAGGAGGTGACATTCAGCTATCCGTCGAGGCCAGATGTTATCATTTTCCGTAATTTCTCAATCTTCTTCCCAGCTGGAAAGACTATTGCCGTAGTTGGCGGCAGTGGTTCTGGGAAAAGCACTGTTGTCTCTCTGATTGAAAGGTTTTATGATCCTAACCATGGGCAGGTTTTGCTGGATGGTGTGGACATAAGAACACTGCAACTGAAATGGTTACGTGATCAGATGGGCCTGGTAAACCAGGAGCCTGCACTTTTTGCTACCACCATTCTTGAGAACATACTCTATGGAAAGGCTGATGCAACAATGGATGAAGTAGAAGCAGCAGCCTCTGCAGCTAATGCTCATAGTTTCATCACGTTGCTTCCTAATGGGTATAACACTCAGGTAGGAGAGCGAGGAGTCCAACTCTCAGGAGGCCAAAAACAGAGAATCGCAATTGCTAGAGCTATGTTGAAAGACCCAAAGATCCTACTCCTAGATGAAGCAACCAGTGCCCTTGATGCAAGCTCTGAAAGCATTGTTCAAGAAGCTCTAGACCGTCTCATGGTAGGGAGGACAACTGTAGTTGTGGCACATCGCCTTTCCACCATAAGAAATGTTGACAGCATTGCAGTTATACAACAAGGGCAAGTTGTAGAGACAGGAACTCATGAAGAACTGATTGCCAAAGCAGGTGCATATTCTTCGTTAATTCGGTTCCAAGAAATGGTTGGAAACAGAGACTTCAGGAATCCATCTACTCGTTGTTCACGATCATCACGGCTAAGCCACTCATTGTCGACCAAGTCTTTGAGCCTCCGGTCTGGCAGCTTAAGGAACCTGAGCTACAGTTACAGTACTGGTGCTGATGGGAGGATAGAGATGATTTCAAATGCTGAGACAGACAGGAAAACTCGAGCTCCAAGGGGATACTTCTTTCGGCTTCTCAAGCTAAATGCACCTGAATGGCCCTATTCAATCATGGGTGCCATAGGATCAGTACTATCCGGGTTTATCGGTCCAACCTTTGCCATTGTTATGAGCAACATGATTGAGGTGTTCTACTACAGAAATCCTGCTTCCATGGAGAGAAAGACAAAGGAGTATGTCTTCGTTTACATAGGAGCTGGGCTATATGCTGTCGTTGCATACTTGATACAACATTACTTCTTCAGCATCATGGGAGAGAACCTCACTACTAGAGTAAGGAGGATGATGCTTGCAGCGATTTTAAGGAACGAAGTTGGATGGTATGATGAAGAGGAGAACAACTCAAGTCTTCTAGCTTCCAAACTGGCCACAGATGCTGCTGATGTGAAATCCGCAATTGCTGAGAGGATTTCTGTAATTCTGCAGAACATGACTTCACTGCTCACTTCATTCATAGTTGCTTTCATTGTGGAATGGAGGGTTTCCCTGCTTATCCTAGCAACTTTCCCGCTTTTAGTTCTTGCCAACTTTGCTCAGCAACTTTCGCTTAAAGGCTTTGCTGGAGACACTGCCAAGGCTCATGCAAAGACGAGCATGATTGCAGGGGAAGGAGTGAGCAACATTCGAACAGTTGCAGCCTTCAATGCACAAGATAAGATCCTATCTCTCTTCTGCCATGAGCTACGCATCCCACAACTAGGAAGCCTTCGTCGGAGCCAAACTGCTGGTCTCCTATTTGGCCTCTCACAGCTTGCCTTATATGCCTCTGAAGCTCTCATTCTGTGGTATGGCGCCCACCTTGTGAGCAAAGGTGTCTCGACCTTCTCCAAAGTCATTAAGGTTTTCGTGGTCCTGGTTGTAACAGCCAATTCAGTAGCAGAAACAGTTAGTCTTGCCCCTGAGATTATTAGGGGTGGTGAAGCTGTTGGCTCTGTGTTTTCAATTCTTGATCGCCAAACCAGGATTGACCCTGATGACCCTGAGGCCGAGGTGGTTGAAACCATTCGTGGGGAGATTGAACTTAGGCATGTTGATTTTGCATACCCTTCACGACCGGATATTATGATCTTTAAAGATTTTAATCTCAGAATCCGTACTGGCCAAAGCCAAGCACTTGTTGGAGCTAGTGGTTCAGGAAAGAGTACTGTGATTGCGTTGATCGAGAGGTTCTATGATCCAATAGTTGGGAAGGTAATGATTGATGGCAAAGACATTCGACGTTTGAACTTGAAGTCTCTTAGGCTGAAAATTGGTTTGGTGCAACAAGAACCTGCTCTCTTTGCAGCAAGCATTTTTGATAACATTGCCTATGGAAAAGAAGGTGCAACCGAAGCAGAAGTGATCGAAGCTGCACGTACAGCCAATGTGCATGGATTCGTTAGTGGACTGCCTGATGGGTACAAAACTCCAGTTGGGGAGAGAGGGGTTCAGCTCTCAGGAGGACAGAAACAAAGAATTGCCATAGCAAGAGCTGTGCTCAAGGACCCAACAATTCTTCTGCTAGATGAGGCCACAAGTGCATTGGATGCAGAATCAGAATGTGTGCTACAAGAAGCACTGGAGAGGCTCATGAGAGGCCGAACCACAGTGTTGGTTGCCCACCGTTTATCAACAATTAGAGGGGTGGACAGCATCGGTGTGGTGCAAGATGGCCGCATTGTGGAACATGGAAGCCACTCAGAACTTGTGAGCCGCCCAGATGGGGCGTATTCGAGACTGTTGCAGCTGCAAAATCATCGTATATGA

Protein Analysis

1251

Amino Acids

136.33

Weight (kDa)

8.49

Isoelectric Point (pI)

35.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 2 - 89 8.6e-12 ABC transporter transmembrane region
ABC_tran PF00005 159 - 307 3.7e-31 ABC transporter
ABC_membrane PF00664 463 - 733 6.3e-50 ABC transporter transmembrane region
ABC_tran PF00005 804 - 952 3.4e-31 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1760
Acc36I ACCTGC 3 cut(s) 1252, 1760, 3286
AccB1I GGYRCC 2 cut(s) 2063, 2798
AccB7I CCANNNNNTGG 2 cut(s) 1804, 3191
AccI GTMKAC 2 cut(s) 267, 1877
AciI CCGC 8 cut(s) 371, 518, 600, 1194, 2400, 2516, 3661, 3700
AclI AACGTT 1 cut(s) 509
AclWI GGATC 5 cut(s) 1241, 1558, 2080, 2659, 3176
AcoI YGGCCR 5 cut(s) 234, 792, 2373, 3106, 3658
AcsI RAATTY 1 cut(s) 736
AcuI CTGAAG 4 cut(s) 415, 1807, 2233, 2796
AcyI GRCGYC 1 cut(s) 2799
AdeI CACNNNGTG 1 cut(s) 2809
AfaI GTAC 8 cut(s) 323, 817, 1936, 2079, 3103, 3151, 3364, 3407
AflII CTTAAG 1 cut(s) 1909
AjiI CACGTC 1 cut(s) 388
AjnI CCWGG 4 cut(s) 1326, 1335, 2859, 2966
AjuI GAANNNNNNNTTGG 2 cut(s) 3245, 3277
Alw21I GWGCWC 4 cut(s) 14, 347, 1999, 3486
AlwI GGATC 5 cut(s) 1241, 1558, 2080, 2659, 3176
AlwNI CAGNNNCTG 2 cut(s) 1427, 2384
Ama87I CYCGRG 3 cut(s) 580, 968, 1992
ApoI RAATTY 1 cut(s) 736
ArsI GACNNNNNNTTYG 4 cut(s) 1870, 1902, 2719, 2751
Asp700I GAANNNNTTC 2 cut(s) 905, 3009
AspLEI GCGC 1 cut(s) 2801
AspS9I GGNCC 8 cut(s) 457, 972, 1045, 1324, 2046, 2096, 2857, 3490
AsuC2I CCSGG 3 cut(s) 581, 582, 2086
AsuHPI GGTGA 5 cut(s) 194, 431, 731, 1114, 2936
AsuII TTCGAA 3 cut(s) 697, 877, 2632
AvaI CYCGRG 3 cut(s) 580, 968, 1992
AvaII GGWCC 5 cut(s) 457, 1045, 2096, 2857, 3490
AxyI CCTNAGG 1 cut(s) 2988
BaeGI GKGCMC 1 cut(s) 1594
BalI TGGCCA 3 cut(s) 794, 2375, 3108
BanI GGYRCC 2 cut(s) 2063, 2798
BanII GRGCYC 3 cut(s) 630, 847, 1999
BbsI GAAGAC 3 cut(s) 421, 2179, 2348
Bbv12I GWGCWC 4 cut(s) 14, 347, 1999, 3486
BceAI ACGGC 4 cut(s) 163, 249, 1169, 1874
BcgI CGANNNNNNTGC 7 cut(s) 389, 423, 1764, 1798, 3709, 3725, 3743
BciT130I CCWGG 4 cut(s) 1328, 1337, 2861, 2968
BciVI GTATCC 2 cut(s) 992, 2000
BclI TGATCA 1 cut(s) 1315
BcnI CCSGG 3 cut(s) 581, 582, 2086
BfaI CTAG 9 cut(s) 1539, 1574, 1631, 2277, 2360, 2504, 2705, 3132, 3509
BfmI CTRYAG 5 cut(s) 1428, 1659, 1924, 2143, 2429
BfoI RGCGCY 1 cut(s) 2802
BfrI CTTAAG 1 cut(s) 1909
BfuAI ACCTGC 3 cut(s) 1252, 1760, 3286
BfuI GTATCC 2 cut(s) 992, 2000
BlpI GCTNAGC 3 cut(s) 675, 1862, 2541
BmcAI AGTACT 3 cut(s) 1936, 2079, 3151
Bme1390I CCNGG 7 cut(s) 581, 582, 1328, 1337, 2086, 2861, 2968
Bme18I GGWCC 5 cut(s) 457, 1045, 2096, 2857, 3490
BmeT110I CYCGRG 3 cut(s) 580, 968, 1992
BmgBI CACGTC 1 cut(s) 388
BmgT120I GGNCC 8 cut(s) 457, 972, 1045, 1324, 2046, 2096, 2857, 3490
BmiI GGNNCC 9 cut(s) 136, 973, 1341, 1796, 1916, 2065, 2723, 2800, 3492
BmrFI CCNGG 7 cut(s) 581, 582, 1328, 1337, 2086, 2861, 2968
BpiI GAAGAC 3 cut(s) 421, 2179, 2348
BpmI CTGGAG 3 cut(s) 2589, 3399, 3587
Bpu10I CCTNAGC 1 cut(s) 1919
Bpu1102I GCTNAGC 3 cut(s) 675, 1862, 2541
Bpu14I TTCGAA 3 cut(s) 697, 877, 2632
BpuEI CTTGAG 5 cut(s) 1079, 1388, 2009, 2335, 3470
BpuMI CCSGG 3 cut(s) 581, 582, 2086
BsaAI YACGTR 2 cut(s) 1313, 3362
BsaBI GATNNNNATC 2 cut(s) 1013, 3087
BsaHI GRCGYC 1 cut(s) 2799
BsaI GGTCTC 2 cut(s) 124, 2741
BsaJI CCNNGG 9 cut(s) 271, 580, 581, 1071, 1255, 2000, 2160, 2580, 2994
BsaWI WCCGGW 3 cut(s) 326, 1896, 3061
BsaXI ACNNNNNCTCC 2 cut(s) 1981, 2011
Bse118I RCCGGY 1 cut(s) 596
Bse1I ACTGG 7 cut(s) 528, 1587, 1942, 2376, 3109, 3416, 3570
Bse21I CCTNAGG 1 cut(s) 2988
Bse3DI GCAATG 2 cut(s) 1704, 3309
Bse8I GATNNNNATC 2 cut(s) 1013, 3087
BseBI CCWGG 4 cut(s) 1328, 1337, 2861, 2968
BseDI CCNNGG 9 cut(s) 271, 580, 581, 1071, 1255, 2000, 2160, 2580, 2994
BseJI GATNNNNATC 2 cut(s) 1013, 3087
BseMI GCAATG 2 cut(s) 1704, 3309
BseNI ACTGG 7 cut(s) 528, 1587, 1942, 2376, 3109, 3416, 3570
BseRI GAGGAG 2 cut(s) 1509, 2354
BseSI GKGCMC 1 cut(s) 1594
BseX3I CGGCCG 1 cut(s) 234
BseYI CCCAGC 2 cut(s) 1165, 2204
BsgI GTGCAG 2 cut(s) 1329, 3342
Bsh1285I CGRYCG 2 cut(s) 237, 3062
BshNI GGYRCC 2 cut(s) 2063, 2798
BsiEI CGRYCG 2 cut(s) 237, 3062
BsiHKAI GWGCWC 4 cut(s) 14, 347, 1999, 3486
BsiHKCI CYCGRG 3 cut(s) 580, 968, 1992
BsiSI CCGG 8 cut(s) 35, 123, 327, 581, 597, 1897, 2085, 3062
BslFI GGGAC 1 cut(s) 534
BsmBI CGTCTC 2 cut(s) 442, 1643
BsmFI GGGAC 1 cut(s) 534
BsmI GAATGC 1 cut(s) 905
Bso31I GGTCTC 2 cut(s) 124, 2741
BsoBI CYCGRG 3 cut(s) 580, 968, 1992
Bsp119I TTCGAA 3 cut(s) 697, 877, 2632
Bsp1286I GDGCHC 7 cut(s) 14, 347, 630, 847, 1594, 1999, 3486
Bsp1407I TGTACA 1 cut(s) 321
Bsp1720I GCTNAGC 3 cut(s) 675, 1862, 2541
Bsp19I CCATGG 2 cut(s) 1255, 2160
BspACI CCGC 8 cut(s) 371, 518, 600, 1194, 2400, 2516, 3661, 3700
BspHI TCATGA 2 cut(s) 1747, 3576
BspLI GGNNCC 9 cut(s) 136, 973, 1341, 1796, 1916, 2065, 2723, 2800, 3492
BspMAI CTGCAG 2 cut(s) 1432, 2433
BspMI ACCTGC 3 cut(s) 1252, 1760, 3286
BspPI GGATC 5 cut(s) 1241, 1558, 2080, 2659, 3176
BspQI GCTCTTC 2 cut(s) 86, 157
BspT104I TTCGAA 3 cut(s) 697, 877, 2632
BspT107I GGYRCC 2 cut(s) 2063, 2798
BspTI CTTAAG 1 cut(s) 1909
BspTNI GGTCTC 2 cut(s) 124, 2741
BsrDI GCAATG 2 cut(s) 1704, 3309
BsrFI RCCGGY 1 cut(s) 596
BsrGI TGTACA 1 cut(s) 321
BsrI ACTGG 7 cut(s) 528, 1587, 1942, 2376, 3109, 3416, 3570
BssAI RCCGGY 1 cut(s) 596
BssECI CCNNGG 9 cut(s) 271, 580, 581, 1071, 1255, 2000, 2160, 2580, 2994
BssNI GRCGYC 1 cut(s) 2799
BssT1I CCWWGG 4 cut(s) 1255, 2000, 2160, 2580
Bst2UI CCWGG 4 cut(s) 1328, 1337, 2861, 2968
Bst6I CTCTTC 4 cut(s) 86, 157, 2331, 2681
BstACI GRCGYC 1 cut(s) 2799
BstAFI CTTAAG 1 cut(s) 1909
BstAPI GCANNNNNTGC 6 cut(s) 1267, 1352, 1427, 1436, 1589, 3533
BstAUI TGTACA 1 cut(s) 321
BstBAI YACGTR 2 cut(s) 1313, 3362
BstBI TTCGAA 3 cut(s) 697, 877, 2632
BstDSI CCRYGG 2 cut(s) 1255, 2160
BstH2I RGCGCY 1 cut(s) 2802
BstHHI GCGC 1 cut(s) 2801
BstMCI CGRYCG 2 cut(s) 237, 3062
BstNI CCWGG 4 cut(s) 1328, 1337, 2861, 2968
BstNSI RCATGY 2 cut(s) 315, 3038
BstSCI CCNGG 7 cut(s) 579, 580, 1326, 1335, 2084, 2859, 2966
BstSFI CTRYAG 5 cut(s) 1428, 1659, 1924, 2143, 2429
BstSLI GKGCMC 1 cut(s) 1594
BstV2I GAAGAC 3 cut(s) 421, 2179, 2348
BstX2I RGATCY 2 cut(s) 1563, 2664
BstXI CCANNNNNNTGG 4 cut(s) 802, 1055, 2732, 3598
BstYI RGATCY 2 cut(s) 1563, 2664
BstZI CGGCCG 1 cut(s) 234
Bsu36I CCTNAGG 1 cut(s) 2988
BsuI GTATCC 2 cut(s) 992, 2000
BtgI CCRYGG 2 cut(s) 1255, 2160
BtgZI GCGATG 2 cut(s) 670, 1658
BtrI CACGTC 1 cut(s) 388
BtsI GCAGTG 5 cut(s) 29, 1204, 1292, 2444, 2574
BtsIMutI CAGTG 9 cut(s) 29, 1204, 1215, 1292, 1594, 2444, 2574, 3563, 3600
BveI ACCTGC 3 cut(s) 1252, 1760, 3286
CaiI CAGNNNCTG 2 cut(s) 1427, 2384
CciI TCATGA 2 cut(s) 1747, 3576
CfoI GCGC 1 cut(s) 2801
Cfr10I RCCGGY 1 cut(s) 596
Cfr13I GGNCC 8 cut(s) 457, 972, 1045, 1324, 2046, 2096, 2857, 3490
Cfr9I CCCGGG 1 cut(s) 580
CseI GACGC 1 cut(s) 424
Csp6I GTAC 8 cut(s) 322, 816, 1935, 2078, 3102, 3150, 3363, 3406
CspCI CAANNNNNGTGG 2 cut(s) 1348, 1383
CviQI GTAC 8 cut(s) 322, 816, 1935, 2078, 3102, 3150, 3363, 3406
DinI GGCGCC 1 cut(s) 2800
DraI TTTAAA 1 cut(s) 3079
DraIII CACNNNGTG 1 cut(s) 2809
EaeI YGGCCR 5 cut(s) 234, 792, 2373, 3106, 3658
EagI CGGCCG 1 cut(s) 234
Eam1104I CTCTTC 4 cut(s) 86, 157, 2331, 2681
EarI CTCTTC 4 cut(s) 86, 157, 2331, 2681
Ecl136II GAGCTC 1 cut(s) 1997
EclXI CGGCCG 1 cut(s) 234
Eco130I CCWWGG 4 cut(s) 1255, 2000, 2160, 2580
Eco147I AGGCCT 1 cut(s) 731
Eco24I GRGCYC 3 cut(s) 630, 847, 1999
Eco31I GGTCTC 2 cut(s) 124, 2741
Eco47I GGWCC 5 cut(s) 457, 1045, 2096, 2857, 3490
Eco52I CGGCCG 1 cut(s) 234
Eco53kI GAGCTC 1 cut(s) 1997
Eco57I CTGAAG 4 cut(s) 415, 1807, 2233, 2796
Eco81I CCTNAGG 1 cut(s) 2988
Eco88I CYCGRG 3 cut(s) 580, 968, 1992
EcoICRI GAGCTC 1 cut(s) 1997
EcoO109I RGGNCCY 2 cut(s) 972, 3490
EcoRI GAATTC 1 cut(s) 736
EcoRII CCWGG 4 cut(s) 1326, 1335, 2859, 2966
EcoT14I CCWWGG 4 cut(s) 1255, 2000, 2160, 2580
EcoT38I GRGCYC 3 cut(s) 630, 847, 1999
EgeI GGCGCC 1 cut(s) 2800
EheI GGCGCC 1 cut(s) 2800
ErhI CCWWGG 4 cut(s) 1255, 2000, 2160, 2580
Esp3I CGTCTC 2 cut(s) 442, 1643
FaqI GGGAC 1 cut(s) 534
FauI CCCGC 3 cut(s) 511, 593, 2523
FauNDI CATATG 1 cut(s) 712
FbaI TGATCA 1 cut(s) 1315
FblI GTMKAC 2 cut(s) 267, 1877
FriOI GRGCYC 3 cut(s) 630, 847, 1999
FspBI CTAG 9 cut(s) 1539, 1574, 1631, 2277, 2360, 2504, 2705, 3132, 3509
GlaI GCGC 1 cut(s) 2800
GsaI CCCAGC 2 cut(s) 1169, 2208
GsuI CTGGAG 3 cut(s) 2589, 3399, 3587
HaeII RGCGCY 1 cut(s) 2802
HapII CCGG 8 cut(s) 35, 123, 327, 581, 597, 1897, 2085, 3062
HgaI GACGC 1 cut(s) 424
HhaI GCGC 1 cut(s) 2801
Hin1I GRCGYC 1 cut(s) 2799
Hin6I GCGC 1 cut(s) 2799
HinP1I GCGC 1 cut(s) 2799
HincII GTYRAC 2 cut(s) 1699, 1878
HindII GTYRAC 2 cut(s) 1699, 1878
HinfI GANTC 7 cut(s) 647, 1497, 1527, 1828, 3096, 3381, 3539
HpaII CCGG 8 cut(s) 35, 123, 327, 581, 597, 1897, 2085, 3062
HphI GGTGA 5 cut(s) 194, 431, 731, 1114, 2936
Hpy99I CGWCG 4 cut(s) 445, 1123, 2721, 3228
HpyCH4IV ACGT 6 cut(s) 387, 509, 1312, 1454, 3226, 3361
HpySE526I ACGT 6 cut(s) 387, 509, 1312, 1454, 3226, 3361
Hsp92I GRCGYC 1 cut(s) 2799
HspAI GCGC 1 cut(s) 2799
KasI GGCGCC 1 cut(s) 2798
KroI GCCGGC 1 cut(s) 596
KroNI GCCGGC 1 cut(s) 598
Ksp22I TGATCA 1 cut(s) 1315
LguI GCTCTTC 2 cut(s) 86, 157
LmnI GCTCC 6 cut(s) 134, 1339, 2002, 2201, 2721, 3128
MaeI CTAG 9 cut(s) 1539, 1574, 1631, 2277, 2360, 2504, 2705, 3132, 3509
MaeII ACGT 6 cut(s) 387, 509, 1312, 1454, 3226, 3361
MaeIII GTNAC 6 cut(s) 419, 776, 1102, 1308, 1928, 2866
MfeI CAATTG 3 cut(s) 1049, 1533, 2403
MflI RGATCY 2 cut(s) 1563, 2664
MhlI GDGCHC 7 cut(s) 14, 347, 630, 847, 1594, 1999, 3486
MlsI TGGCCA 3 cut(s) 794, 2375, 3108
MluNI TGGCCA 3 cut(s) 794, 2375, 3108
Mly113I GGCGCC 1 cut(s) 2799
MlyI GAGTC 1 cut(s) 1506
MmeI TCCRAC 6 cut(s) 1525, 1789, 2123, 2302, 2699, 3106
Mox20I TGGCCA 3 cut(s) 794, 2375, 3108
MroNI GCCGGC 1 cut(s) 596
MroXI GAANNNNTTC 2 cut(s) 905, 3009
MscI TGGCCA 3 cut(s) 794, 2375, 3108
MslI CAYNNNNRTG 4 cut(s) 161, 2041, 2114, 3644
Msp20I TGGCCA 3 cut(s) 794, 2375, 3108
MspA1I CMGCKG 3 cut(s) 995, 1169, 3733
MspCI CTTAAG 1 cut(s) 1909
MspI CCGG 8 cut(s) 35, 123, 327, 581, 597, 1897, 2085, 3062
MspR9I CCNGG 7 cut(s) 581, 582, 1328, 1337, 2086, 2861, 2968
MunI CAATTG 3 cut(s) 1049, 1533, 2403
Mva1269I GAATGC 1 cut(s) 905
MvaI CCWGG 4 cut(s) 1328, 1337, 2861, 2968
NaeI GCCGGC 1 cut(s) 598
NarI GGCGCC 1 cut(s) 2799
NciI CCSGG 3 cut(s) 581, 582, 2086
NcoI CCATGG 2 cut(s) 1255, 2160
NdeI CATATG 1 cut(s) 712
NgoMIV GCCGGC 1 cut(s) 596
NlaIV GGNNCC 9 cut(s) 136, 973, 1341, 1796, 1916, 2065, 2723, 2800, 3492
NmeAIII GCCGAG 4 cut(s) 252, 328, 668, 3019
NmuCI GTSAC 2 cut(s) 419, 1102
NspI RCATGY 2 cut(s) 315, 3038
NspV TTCGAA 3 cut(s) 697, 877, 2632
PaeI GCATGC 1 cut(s) 315
PaeR7I CTCGAG 1 cut(s) 1992
PagI TCATGA 2 cut(s) 1747, 3576
PaqCI CACCTGC 1 cut(s) 1760
PceI AGGCCT 1 cut(s) 731
PciSI GCTCTTC 2 cut(s) 86, 157
PcsI WCGNNNNNNNCGW 2 cut(s) 279, 1846
PctI GAATGC 1 cut(s) 905
PdiI GCCGGC 1 cut(s) 598
PdmI GAANNNNTTC 2 cut(s) 905, 3009
PfeI GAWTC 6 cut(s) 647, 1527, 1828, 3096, 3381, 3539
PflFI GACNNNGTC 2 cut(s) 425, 1882
PflMI CCANNNNNTGG 2 cut(s) 1804, 3191
PleI GAGTC 1 cut(s) 1505
PluTI GGCGCC 1 cut(s) 2802
PpsI GAGTC 1 cut(s) 1505
Ppu21I YACGTR 2 cut(s) 1313, 3362
PpuMI RGGWCCY 1 cut(s) 3490
Psp124BI GAGCTC 1 cut(s) 1999
Psp1406I AACGTT 1 cut(s) 509
Psp5II RGGWCCY 1 cut(s) 3490
Psp6I CCWGG 4 cut(s) 1326, 1335, 2859, 2966
PspFI CCCAGC 2 cut(s) 1165, 2204
PspGI CCWGG 4 cut(s) 1326, 1335, 2859, 2966
PspN4I GGNNCC 9 cut(s) 136, 973, 1341, 1796, 1916, 2065, 2723, 2800, 3492
PspPI GGNCC 8 cut(s) 457, 972, 1045, 1324, 2046, 2096, 2857, 3490
PspPPI RGGWCCY 1 cut(s) 3490
PspXI VCTCGAGB 1 cut(s) 1992
PsrI GAACNNNNNNTAC 2 cut(s) 1907, 1939
PstI CTGCAG 2 cut(s) 1432, 2433
PstNI CAGNNNCTG 2 cut(s) 1427, 2384
PsuI RGATCY 2 cut(s) 1563, 2664
PsyI GACNNNGTC 2 cut(s) 425, 1882
PvuII CAGCTG 3 cut(s) 995, 1169, 3733
RsaI GTAC 8 cut(s) 323, 817, 1936, 2079, 3103, 3151, 3364, 3407
RsaNI GTAC 8 cut(s) 322, 816, 1935, 2078, 3102, 3150, 3363, 3406
RseI CAYNNNNRTG 4 cut(s) 161, 2041, 2114, 3644
SacI GAGCTC 1 cut(s) 1999
SalI GTCGAC 1 cut(s) 1876
SapI GCTCTTC 2 cut(s) 86, 157
Sau96I GGNCC 8 cut(s) 457, 972, 1045, 1324, 2046, 2096, 2857, 3490
ScaI AGTACT 3 cut(s) 1936, 2079, 3151
SchI GAGTC 1 cut(s) 1506
ScrFI CCNGG 7 cut(s) 581, 582, 1328, 1337, 2086, 2861, 2968
SduI GDGCHC 7 cut(s) 14, 347, 630, 847, 1594, 1999, 3486
SfcI CTRYAG 5 cut(s) 1428, 1659, 1924, 2143, 2429
SfoI GGCGCC 1 cut(s) 2800
Sfr274I CTCGAG 1 cut(s) 1992
SfuI TTCGAA 3 cut(s) 697, 877, 2632
SinI GGWCC 5 cut(s) 457, 1045, 2096, 2857, 3490
SlaI CTCGAG 1 cut(s) 1992
SmaI CCCGGG 1 cut(s) 582
SmiMI CAYNNNNRTG 4 cut(s) 161, 2041, 2114, 3644
SmlI CTYRAG 7 cut(s) 1094, 1367, 1909, 1992, 2024, 2350, 3485
SmoI CTYRAG 7 cut(s) 1094, 1367, 1909, 1992, 2024, 2350, 3485
SphI GCATGC 1 cut(s) 315
SseBI AGGCCT 1 cut(s) 731
SsiI CCGC 8 cut(s) 371, 518, 600, 1194, 2400, 2516, 3661, 3700
SspDI GGCGCC 1 cut(s) 2798
SspMI CTAG 9 cut(s) 1539, 1574, 1631, 2277, 2360, 2504, 2705, 3132, 3509
SstI GAGCTC 1 cut(s) 1999
StuI AGGCCT 1 cut(s) 731
StyD4I CCNGG 7 cut(s) 579, 580, 1326, 1335, 2084, 2859, 2966
StyI CCWWGG 4 cut(s) 1255, 2000, 2160, 2580
TaiI ACGT 6 cut(s) 390, 512, 1315, 1457, 3229, 3364
TaqII GACCGA 1 cut(s) 2084
TatI WGTACW 4 cut(s) 321, 1934, 2077, 3149
TauI GCSGC 3 cut(s) 1197, 3663, 3702
TfiI GAWTC 6 cut(s) 647, 1527, 1828, 3096, 3381, 3539
TscAI CASTG 9 cut(s) 36, 1204, 1222, 1299, 1594, 2451, 2581, 3570, 3600
TseFI GTSAC 2 cut(s) 419, 1102
Tsp45I GTSAC 2 cut(s) 419, 1102
TspDTI ATGAA 9 cut(s) 481, 1422, 1438, 1593, 1764, 2349, 2445, 2449, 2461
TspGWI ACGGA 4 cut(s) 458, 1107, 1133, 3089
TspMI CCCGGG 1 cut(s) 580
TspRI CASTG 9 cut(s) 36, 1204, 1222, 1299, 1594, 2451, 2581, 3570, 3600
Tth111I GACNNNGTC 2 cut(s) 425, 1882
Van91I CCANNNNNTGG 2 cut(s) 1804, 3191
Vha464I CTTAAG 1 cut(s) 1909
VpaK11BI GGWCC 5 cut(s) 457, 1045, 2096, 2857, 3490
XapI RAATTY 1 cut(s) 736
XbaI TCTAGA 1 cut(s) 1630
XceI RCATGY 2 cut(s) 315, 3038
XcmI CCANNNNNNNNNTGG 3 cut(s) 1805, 3122, 3526
XhoI CTCGAG 1 cut(s) 1992
XmaI CCCGGG 1 cut(s) 580
XmiI GTMKAC 2 cut(s) 267, 1877
XmnI GAANNNNTTC 2 cut(s) 905, 3009
XspI CTAG 9 cut(s) 1539, 1574, 1631, 2277, 2360, 2504, 2705, 3132, 3509
ZrmI AGTACT 3 cut(s) 1936, 2079, 3151
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.