AT3G30180

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Forward (+)
11810726 .. 11813883
3158 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G30180.1

Sequence Viewer

Length: 1398 bp
ATGGGCATAATGATGATGATTTTGGGTCTTCTTGTGATCATTGTTTGTTTATGTACTGCTCTTCTCCGATGGAACCAGATGCGATATTCTAAGAAAGGTCTTCCTCCTGGAACCATGGGCTGGCCAATATTTGGTGAAACGACTGAGTTTCTTAAACAAGGACCAGATTTCATGAAAAACCAAAGACTAAGATATGGGAGTTTCTTCAAGTCTCACATTCTTGGTTGCCCAACAATAGTCTCAATGGACGCAGAGTTAAACAGATACATTCTAATGAATGAATCGAAAGGACTTGTTGCCGGTTACCCGCAATCTATGCTTGATATTCTAGGGACATGCAACATAGCTGCGGTTCATGGCCCGAGCCACCGGCTAATGAGAGGCTCGTTGCTTTCTTTAATAAGCCCAACCATGATGAAAGACCATCTCTTGCCTAAGATTGATGATTTCATGAGAAACTATCTTTGTGGTTGGGATGATCTTGAGACAGTTGATATCCAAGAAAAGACCAAACATATGGCATTTTTATCATCGTTGTTACAAATAGCTGAGACTTTGAAAAAACCAGAGGTTGAAGAATATAGAACAGAGTTTTTCAAGCTTGTTGTGGGAACTCTATCGGTCCCGATCGATATCCCGGGAACGAATTACCGCAGTGGAGTCCAAGCAAGAAACAACATCGATAGGTTATTGACAGAACTGATGCAAGAAAGAAAAGAGTCTGGAGAAACTTTCACAGACATGTTGGGTTACTTGATGAAGAAGGAAGATAACCGATACTTGTTAACCGATAAAGAGATAAGAGATCAAGTGGTAACGATCTTGTATTCCGGTTATGAGACTGTCTCTACAACCTCCATGATGGCTCTTAAGTATCTCCATGATCATCCAAAAGCTCTTGAAGAACTCAGAAGAGAACATTTGGCTATAAGGGAGAGAAAACGACCTGACGAACCGCTCACTCTCGACGATATTAAATCGATGAAATTCACTCGAGCTGTGATCTTTGAGACATCAAGATTGGCAACGATTGTTAATGGTGTCCTTAGGAAAACTACTCACGACTTAGAACTCAACGGTTATTTAATCCCAAAAGGTTGGAGAATTTACGTATACACAAGAGAGATTAACTATGATACATCTCTTTATGAAGATCCAATGATCTTTAACCCATGGAGATGGATGGAAAAGAGCTTAGAATCAAAGAGCTATTTCTTACTCTTTGGAGGTGGAGTTAGGCTTTGCCCTGGAAAGGAACTAGGAATCTCGGAAGTCTCAAGCTTCCTTCACTACTTTGTTACAAAATATAGATGGGAAGAGAATGGAGAAGACAAATTAATGGTCTTTCCAAGAGTTTCTGCACCAAAAGGATACCATCTTAAGTGTTCACCTTACTGA

Protein Analysis

465

Amino Acids

53.81

Weight (kDa)

8.28

Isoelectric Point (pI)

33.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 35 - 459 5.5e-55 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 120, 131
AccBSI CCGCTC 1 cut(s) 958
AccI GTMKAC 1 cut(s) 1113
AciI CCGC 4 cut(s) 308, 350, 652, 956
AclWI GGATC 1 cut(s) 1148
AcoI YGGCCR 1 cut(s) 122
AcsI RAATTY 2 cut(s) 986, 1104
AfaI GTAC 1 cut(s) 55
AfiI CCNNNNNNNGG 3 cut(s) 120, 131, 1252
AflII CTTAAG 2 cut(s) 869, 1379
AflIII ACRYGT 1 cut(s) 741
AgsI TTSAA 5 cut(s) 208, 559, 575, 598, 902
AjnI CCWGG 2 cut(s) 106, 1246
AluBI AGCT 8 cut(s) 347, 548, 601, 896, 998, 1194, 1209, 1281
AluI AGCT 8 cut(s) 347, 548, 601, 896, 998, 1194, 1209, 1281
Alw26I GTCTC 8 cut(s) 216, 244, 479, 545, 833, 850, 1004, 1279
AlwI GGATC 1 cut(s) 1148
Ama87I CYCGRG 3 cut(s) 361, 637, 993
AoxI GGCC 2 cut(s) 122, 358
ApeKI GCWGC 1 cut(s) 347
ApoI RAATTY 2 cut(s) 986, 1104
ArsI GACNNNNNNTTYG 2 cut(s) 1326, 1358
AseI ATTAAT 1 cut(s) 1337
AspS9I GGNCC 3 cut(s) 161, 359, 622
AsuC2I CCSGG 2 cut(s) 638, 639
AsuHPI GGTGA 2 cut(s) 146, 1380
AvaI CYCGRG 3 cut(s) 361, 637, 993
AvaII GGWCC 2 cut(s) 161, 622
AxyI CCTNAGG 1 cut(s) 1046
BalI TGGCCA 1 cut(s) 124
BbsI GAAGAC 3 cut(s) 20, 92, 1335
BbvI GCAGC 1 cut(s) 334
BccI CCATC 7 cut(s) 63, 432, 856, 1173, 1177, 1305, 1383
BciT130I CCWGG 2 cut(s) 108, 1248
BciVI GTATCC 1 cut(s) 1364
BclI TGATCA 2 cut(s) 36, 883
BcnI CCSGG 2 cut(s) 638, 639
BcoDI GTCTC 8 cut(s) 216, 244, 479, 545, 833, 850, 1004, 1279
BfaI CTAG 2 cut(s) 329, 1259
BfrI CTTAAG 2 cut(s) 869, 1379
BfuI GTATCC 1 cut(s) 1364
BisI GCNGC 1 cut(s) 348
BlsI GCNGC 1 cut(s) 349
Bme1390I CCNGG 4 cut(s) 108, 638, 639, 1248
Bme18I GGWCC 2 cut(s) 161, 622
BmeT110I CYCGRG 3 cut(s) 361, 637, 993
BmgT120I GGNCC 3 cut(s) 161, 359, 622
BmiI GGNNCC 3 cut(s) 74, 112, 624
BmrFI CCNGG 4 cut(s) 108, 638, 639, 1248
BmsI GCATC 2 cut(s) 69, 693
BpiI GAAGAC 3 cut(s) 20, 92, 1335
BplI GAGNNNNNCTC 2 cut(s) 830, 862
BpmI CTGGAG 1 cut(s) 744
BpuEI CTTGAG 2 cut(s) 503, 1261
BpuMI CCSGG 2 cut(s) 638, 639
Bsa29I ATCGAT 3 cut(s) 630, 681, 980
BsaAI YACGTR 1 cut(s) 1111
BsaBI GATNNNNATC 1 cut(s) 632
BsaJI CCNNGG 4 cut(s) 114, 637, 1172, 1246
BsaWI WCCGGW 1 cut(s) 830
BsaXI ACNNNNNCTCC 2 cut(s) 1218, 1248
Bsc4I CCNNNNNNNGG 3 cut(s) 120, 131, 1252
Bse118I RCCGGY 2 cut(s) 299, 369
Bse21I CCTNAGG 1 cut(s) 1046
Bse8I GATNNNNATC 1 cut(s) 632
BseBI CCWGG 2 cut(s) 108, 1248
BseCI ATCGAT 3 cut(s) 630, 681, 980
BseDI CCNNGG 4 cut(s) 114, 637, 1172, 1246
BseGI GGATG 3 cut(s) 481, 886, 1188
BseJI GATNNNNATC 1 cut(s) 632
BseLI CCNNNNNNNGG 3 cut(s) 120, 131, 1252
BseMII CTCAG 3 cut(s) 135, 540, 922
BseXI GCAGC 1 cut(s) 334
BsgI GTGCAG 1 cut(s) 1344
Bsh1285I CGRYCG 1 cut(s) 630
BshFI GGCC 2 cut(s) 124, 360
BshVI ATCGAT 3 cut(s) 630, 681, 980
BsiEI CGRYCG 1 cut(s) 630
BsiHKCI CYCGRG 3 cut(s) 361, 637, 993
BsiSI CCGG 4 cut(s) 300, 370, 638, 831
BslFI GGGAC 2 cut(s) 346, 608
BslI CCNNNNNNNGG 3 cut(s) 120, 131, 1252
BsmAI GTCTC 8 cut(s) 216, 244, 479, 545, 833, 850, 1004, 1279
BsmFI GGGAC 2 cut(s) 346, 608
BsnI GGCC 2 cut(s) 124, 360
BsoBI CYCGRG 3 cut(s) 361, 637, 993
Bsp143I GATC 9 cut(s) 36, 478, 627, 805, 819, 883, 1002, 1153, 1161
Bsp19I CCATGG 2 cut(s) 114, 1172
BspACI CCGC 4 cut(s) 308, 350, 652, 956
BspANI GGCC 2 cut(s) 124, 360
BspCNI CTCAG 3 cut(s) 136, 541, 921
BspDI ATCGAT 3 cut(s) 630, 681, 980
BspHI TCATGA 2 cut(s) 171, 450
BspLI GGNNCC 3 cut(s) 74, 112, 624
BspPI GGATC 1 cut(s) 1148
BspQI GCTCTTC 1 cut(s) 66
BspTI CTTAAG 2 cut(s) 869, 1379
BsrBI CCGCTC 1 cut(s) 958
BsrFI RCCGGY 2 cut(s) 299, 369
BssAI RCCGGY 2 cut(s) 299, 369
BssECI CCNNGG 4 cut(s) 114, 637, 1172, 1246
BssMI GATC 9 cut(s) 36, 478, 627, 805, 819, 883, 1002, 1153, 1161
BssNAI GTATAC 1 cut(s) 1114
BssT1I CCWWGG 2 cut(s) 114, 1172
Bst1107I GTATAC 1 cut(s) 1114
Bst2UI CCWGG 2 cut(s) 108, 1248
Bst4CI ACNGT 3 cut(s) 490, 844, 1079
Bst6I CTCTTC 3 cut(s) 66, 907, 1311
BstAFI CTTAAG 2 cut(s) 869, 1379
BstAPI GCANNNNNTGC 1 cut(s) 316
BstBAI YACGTR 1 cut(s) 1111
BstC8I GCNNGC 1 cut(s) 122
BstDEI CTNAG 9 cut(s) 90, 144, 188, 435, 549, 908, 1046, 1066, 1195
BstDSI CCRYGG 2 cut(s) 114, 1172
BstEII GGTNACC 1 cut(s) 302
BstF5I GGATG 3 cut(s) 481, 886, 1188
BstKTI GATC 9 cut(s) 39, 481, 630, 808, 822, 886, 1005, 1156, 1164
BstMAI GTCTC 8 cut(s) 216, 244, 479, 545, 833, 850, 1004, 1279
BstMBI GATC 9 cut(s) 36, 478, 627, 805, 819, 883, 1002, 1153, 1161
BstMCI CGRYCG 1 cut(s) 630
BstMWI GCNNNNNNNGC 1 cut(s) 316
BstNI CCWGG 2 cut(s) 108, 1248
BstNSI RCATGY 2 cut(s) 339, 745
BstPI GGTNACC 1 cut(s) 302
BstSCI CCNGG 4 cut(s) 106, 636, 637, 1246
BstSNI TACGTA 1 cut(s) 1111
BstV1I GCAGC 1 cut(s) 334
BstV2I GAAGAC 3 cut(s) 20, 92, 1335
BstX2I RGATCY 1 cut(s) 1153
BstXI CCANNNNNNTGG 3 cut(s) 517, 1098, 1179
BstYI RGATCY 1 cut(s) 1153
BstZ17I GTATAC 1 cut(s) 1114
Bsu15I ATCGAT 3 cut(s) 630, 681, 980
Bsu36I CCTNAGG 1 cut(s) 1046
BsuI GTATCC 1 cut(s) 1364
BsuRI GGCC 2 cut(s) 124, 360
BsuTUI ATCGAT 3 cut(s) 630, 681, 980
BtgI CCRYGG 2 cut(s) 114, 1172
BtsCI GGATG 3 cut(s) 481, 886, 1188
BtsI GCAGTG 1 cut(s) 661
BtsIMutI CAGTG 1 cut(s) 661
Cac8I GCNNGC 1 cut(s) 122
CciI TCATGA 2 cut(s) 171, 450
Cfr10I RCCGGY 2 cut(s) 299, 369
Cfr13I GGNCC 3 cut(s) 161, 359, 622
Cfr9I CCCGGG 1 cut(s) 637
ClaI ATCGAT 3 cut(s) 630, 681, 980
CseI GACGC 1 cut(s) 257
Csp6I GTAC 1 cut(s) 54
CviQI GTAC 1 cut(s) 54
DdeI CTNAG 9 cut(s) 90, 144, 188, 435, 549, 908, 1046, 1066, 1195
DpnI GATC 9 cut(s) 38, 480, 629, 807, 821, 885, 1004, 1155, 1163
DpnII GATC 9 cut(s) 36, 478, 627, 805, 819, 883, 1002, 1153, 1161
EaeI YGGCCR 1 cut(s) 122
Eam1104I CTCTTC 3 cut(s) 66, 907, 1311
EarI CTCTTC 3 cut(s) 66, 907, 1311
Eco105I TACGTA 1 cut(s) 1111
Eco130I CCWWGG 2 cut(s) 114, 1172
Eco32I GATATC 2 cut(s) 496, 634
Eco47I GGWCC 2 cut(s) 161, 622
Eco81I CCTNAGG 1 cut(s) 1046
Eco88I CYCGRG 3 cut(s) 361, 637, 993
Eco91I GGTNACC 1 cut(s) 302
EcoO65I GGTNACC 1 cut(s) 302
EcoRII CCWGG 2 cut(s) 106, 1246
EcoRV GATATC 2 cut(s) 496, 634
EcoT14I CCWWGG 2 cut(s) 114, 1172
ErhI CCWWGG 2 cut(s) 114, 1172
FaqI GGGAC 2 cut(s) 346, 608
FauI CCCGC 1 cut(s) 315
FauNDI CATATG 1 cut(s) 516
FbaI TGATCA 2 cut(s) 36, 883
FblI GTMKAC 1 cut(s) 1113
Fnu4HI GCNGC 1 cut(s) 348
FokI GGATG 3 cut(s) 488, 873, 1195
Fsp4HI GCNGC 1 cut(s) 348
FspBI CTAG 2 cut(s) 329, 1259
GluI GCNGC 1 cut(s) 348
GsuI CTGGAG 1 cut(s) 744
HaeIII GGCC 2 cut(s) 124, 360
HapII CCGG 4 cut(s) 300, 370, 638, 831
HgaI GACGC 1 cut(s) 257
HincII GTYRAC 1 cut(s) 786
HindII GTYRAC 1 cut(s) 786
HindIII AAGCTT 2 cut(s) 599, 1279
HinfI GANTC 5 cut(s) 281, 660, 719, 1199, 1263
HpaI GTTAAC 1 cut(s) 786
HpaII CCGG 4 cut(s) 300, 370, 638, 831
HphI GGTGA 2 cut(s) 146, 1380
Hpy166II GTNNAC 3 cut(s) 786, 1114, 1388
Hpy188I TCNGA 3 cut(s) 68, 911, 1270
Hpy188III TCNNGA 9 cut(s) 172, 451, 482, 625, 723, 899, 965, 1017, 1061
Hpy8I GTNNAC 3 cut(s) 786, 1114, 1388
Hpy99I CGWCG 1 cut(s) 971
HpyAV CCTTC 2 cut(s) 757, 1295
HpyCH4III ACNGT 3 cut(s) 490, 844, 1079
HpyCH4IV ACGT 1 cut(s) 1110
HpyCH4V TGCA 3 cut(s) 339, 706, 1361
HpyF10VI GCNNNNNNNGC 1 cut(s) 316
HpyF3I CTNAG 9 cut(s) 90, 144, 188, 435, 549, 908, 1046, 1066, 1195
HpySE526I ACGT 1 cut(s) 1110
Ksp22I TGATCA 2 cut(s) 36, 883
KspAI GTTAAC 1 cut(s) 786
Kzo9I GATC 9 cut(s) 36, 478, 627, 805, 819, 883, 1002, 1153, 1161
LguI GCTCTTC 1 cut(s) 66
Lsp1109I GCAGC 1 cut(s) 334
LweI GCATC 2 cut(s) 69, 693
MaeI CTAG 2 cut(s) 329, 1259
MaeII ACGT 1 cut(s) 1110
MaeIII GTNAC 5 cut(s) 302, 537, 749, 814, 1297
MalI GATC 9 cut(s) 38, 480, 629, 807, 821, 885, 1004, 1155, 1163
MbiI CCGCTC 1 cut(s) 958
MboI GATC 9 cut(s) 36, 478, 627, 805, 819, 883, 1002, 1153, 1161
MflI RGATCY 1 cut(s) 1153
MlsI TGGCCA 1 cut(s) 124
MluCI AATT 4 cut(s) 646, 986, 1104, 1334
MluNI TGGCCA 1 cut(s) 124
MlyI GAGTC 2 cut(s) 669, 728
MmeI TCCRAC 1 cut(s) 1079
MnlI CCTC 5 cut(s) 114, 374, 562, 865, 1220
Mox20I TGGCCA 1 cut(s) 124
MscI TGGCCA 1 cut(s) 124
MslI CAYNNNNRTG 4 cut(s) 11, 272, 740, 1177
Msp20I TGGCCA 1 cut(s) 124
MspCI CTTAAG 2 cut(s) 869, 1379
MspI CCGG 4 cut(s) 300, 370, 638, 831
MspR9I CCNGG 4 cut(s) 108, 638, 639, 1248
MvaI CCWGG 2 cut(s) 108, 1248
MwoI GCNNNNNNNGC 1 cut(s) 316
NciI CCSGG 2 cut(s) 638, 639
NcoI CCATGG 2 cut(s) 114, 1172
NdeI CATATG 1 cut(s) 516
NdeII GATC 9 cut(s) 36, 478, 627, 805, 819, 883, 1002, 1153, 1161
NlaIV GGNNCC 3 cut(s) 74, 112, 624
NspI RCATGY 2 cut(s) 339, 745
PaeR7I CTCGAG 1 cut(s) 993
PagI TCATGA 2 cut(s) 171, 450
PciI ACATGT 1 cut(s) 741
PciSI GCTCTTC 1 cut(s) 66
PfeI GAWTC 3 cut(s) 281, 1199, 1263
PflMI CCANNNNNTGG 2 cut(s) 120, 131
PfoI TCCNGGA 1 cut(s) 106
PkrI GCNGC 1 cut(s) 349
Ple19I CGATCG 1 cut(s) 630
PleI GAGTC 2 cut(s) 668, 727
PpsI GAGTC 2 cut(s) 668, 727
Ppu21I YACGTR 1 cut(s) 1111
PscI ACATGT 1 cut(s) 741
PshBI ATTAAT 1 cut(s) 1337
Psp6I CCWGG 2 cut(s) 106, 1246
PspEI GGTNACC 1 cut(s) 302
PspGI CCWGG 2 cut(s) 106, 1246
PspN4I GGNNCC 3 cut(s) 74, 112, 624
PspPI GGNCC 3 cut(s) 161, 359, 622
PspXI VCTCGAGB 1 cut(s) 993
PsuI RGATCY 1 cut(s) 1153
PvuI CGATCG 1 cut(s) 630
RsaI GTAC 1 cut(s) 55
RsaNI GTAC 1 cut(s) 54
RseI CAYNNNNRTG 4 cut(s) 11, 272, 740, 1177
SapI GCTCTTC 1 cut(s) 66
SatI GCNGC 1 cut(s) 348
Sau3AI GATC 9 cut(s) 36, 478, 627, 805, 819, 883, 1002, 1153, 1161
Sau96I GGNCC 3 cut(s) 161, 359, 622
SchI GAGTC 2 cut(s) 669, 728
ScrFI CCNGG 4 cut(s) 108, 638, 639, 1248
SfaNI GCATC 2 cut(s) 69, 693
Sfr274I CTCGAG 1 cut(s) 993
SinI GGWCC 2 cut(s) 161, 622
SlaI CTCGAG 1 cut(s) 993
SmaI CCCGGG 1 cut(s) 639
SmiMI CAYNNNNRTG 4 cut(s) 11, 272, 740, 1177
SmlI CTYRAG 5 cut(s) 482, 869, 993, 1276, 1379
SmoI CTYRAG 5 cut(s) 482, 869, 993, 1276, 1379
SnaBI TACGTA 1 cut(s) 1111
Sse9I AATT 4 cut(s) 646, 986, 1104, 1334
SsiI CCGC 4 cut(s) 308, 350, 652, 956
SspI AATATT 1 cut(s) 129
SspMI CTAG 2 cut(s) 329, 1259
StyD4I CCNGG 4 cut(s) 106, 636, 637, 1246
StyI CCWWGG 2 cut(s) 114, 1172
TaaI ACNGT 3 cut(s) 490, 844, 1079
TaiI ACGT 1 cut(s) 1113
TaqI TCGA 6 cut(s) 284, 630, 681, 966, 980, 994
TaqII GACCGA 1 cut(s) 610
TasI AATT 4 cut(s) 646, 986, 1104, 1334
TatI WGTACW 1 cut(s) 53
TfiI GAWTC 3 cut(s) 281, 1199, 1263
TscAI CASTG 1 cut(s) 661
TseI GCWGC 1 cut(s) 347
TspMI CCCGGG 1 cut(s) 637
TspRI CASTG 1 cut(s) 661
Van91I CCANNNNNTGG 2 cut(s) 120, 131
Vha464I CTTAAG 2 cut(s) 869, 1379
VpaK11BI GGWCC 2 cut(s) 161, 622
VspI ATTAAT 1 cut(s) 1337
XapI RAATTY 2 cut(s) 986, 1104
XceI RCATGY 2 cut(s) 339, 745
XhoI CTCGAG 1 cut(s) 993
XmaI CCCGGG 1 cut(s) 637
XmiI GTMKAC 1 cut(s) 1113
XspI CTAG 2 cut(s) 329, 1259
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.