RLG00000021512

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Forward (+)
76038733 .. 76041228
2496 bp
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UTR
Exon/CDS
Intron
RLM00000021512

Sequence Viewer

Length: 1404 bp
ATGGCTGTGTTTGTGGTGGTACTACTCTGTGTGCTCTTTGTGCTCTGTTTCTGCTCTGCTCTGCTAAGATGGAATGAGGTGAGGTACAGGAAGAAGGGTCTTCCTCCAGGCACAATGGGCTGGCCAGTCTTTGGAGAAACCACAGAGTTCCTCAAGCAAGGCCCAAGCTTCATGAAAAACCAGAGAGCTAGGTATGGTAGTTTTTTCAAATCCCACATACTGGGGTGTCCTACCGTAGTTTCCATGGATCCAGAGGTGAACAGATACATCCTAATGAACGAAGCTAAAGGCCTCGTTCCCGGGTACCCTCAATCGATGTTGGATATCTTGGGCAAGTGTAACATTGCAGCTGTTCATGGCTCCACTCACAAGTACATGAGAGGGGCATTGCTTGCCCTCATTAGCTCAACCATGATCAGAGACCAGATTTTGCCCAAGATTGATGACTTCATGAGAGCCCACCTCAGTGGTTGGGGGAACCAAGTCATCAACATCCAAGAAAAGACCAAAGAGATGGCGCTTCTTTCGTCGCTTAAACAGATTGCAGGCATTGAATCAAGCTCGATTTATCAGGCATTCAAGACCGAGTTCTTCAAGCTTGTGTTGGGAACTCTCTCACTGCCCATTGATCTTCCTGGCACAAATTATCGCCGCGGATTTCAGGCGAGGAAGAATATTGTTAGCATGTTGAAGCAACTAATAGAAGATAGAAGGGCTTCTTCAGAGGAAGTCCACCAAGACATGCTTGGTGGATTGATGAGAAGTGATGATCAGAACAGATACAAACTCACTGATGAAGAAATAATCGATCACATCATCACGATTATGTATTCGGGCTATGAGACTGTTTCGACCACATCAATGATGGCGGTTAAGTACCTTCATGATCATCCACAAGCGCTTGAAGAACTCAGAAAAGAACATTTGGCAATCAGAGCCAGAAAAAGGCCTGAGGATCCCATTGACTGGAATGACCTGAAATCTATGCGGTTTACTCGTGCGGTGATATTCGAGACCTCAAGATTAGCTACTATTGTAAATGGGGTTTTGAGGAAAACCACTCAAGATATGGAACTAAATGGGTTTTTGATACCAAAAGGATGGAGAATCTATGTTTATACAAGAGAGACTAACTACGATTCGTTTACGTACCCTGATCCATTAACCTTCAATCCATGGAGATGGATGGATAAGAGCTTGGAGTCTAACAACTCCTTTATATTTGGGGGAGGTACTAGGCTGTGTCCAGGAAAGGAGTTGGGAATAGCAGAAATTTCCACTTTCCTACACTACTTTGTAACTAGATACAGATGGGAAGAAGTTGGGGGAGATAAACTGATGAAGTTTCCAAGAGTTGAAGCGCCAAATGGACTGCACATTAGGGTTTCAAATCTGACTAACTAG

Protein Analysis

468

Amino Acids

53.56

Weight (kDa)

9.15

Isoelectric Point (pI)

41.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 35 - 449 7.9e-55 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 303
AccB1I GGYRCC 1 cut(s) 303
AccB7I CCANNNNNTGG 3 cut(s) 131, 220, 966
AccII CGCG 1 cut(s) 654
AciI CCGC 5 cut(s) 652, 654, 869, 988, 1001
AclWI GGATC 5 cut(s) 242, 255, 950, 963, 1151
AcoI YGGCCR 1 cut(s) 122
AcsI RAATTY 1 cut(s) 1272
AcuI CTGAAG 1 cut(s) 705
AfaI GTAC 7 cut(s) 21, 86, 305, 374, 878, 1151, 1234
AfeI AGCGCT 1 cut(s) 900
AfiI CCNNNNNNNGG 4 cut(s) 131, 220, 945, 966
AgsI TTSAA 9 cut(s) 208, 554, 580, 595, 691, 905, 1171, 1358, 1389
AjnI CCWGG 3 cut(s) 106, 634, 1246
AleI CACNNNNGTG 1 cut(s) 465
AluBI AGCT 9 cut(s) 168, 188, 284, 350, 405, 561, 598, 1028, 1197
AluI AGCT 9 cut(s) 168, 188, 284, 350, 405, 561, 598, 1028, 1197
Alw21I GWGCWC 2 cut(s) 36, 45
Alw26I GTCTC 4 cut(s) 414, 836, 1007, 1121
AlwI GGATC 5 cut(s) 242, 255, 950, 963, 1151
Ama87I CYCGRG 1 cut(s) 299
Aor51HI AGCGCT 1 cut(s) 900
AoxI GGCC 4 cut(s) 122, 160, 289, 947
ApeKI GCWGC 1 cut(s) 347
ApoI RAATTY 1 cut(s) 1272
Asp700I GAANNNNTTC 1 cut(s) 715
Asp718I GGTACC 1 cut(s) 303
AspLEI GCGC 3 cut(s) 520, 901, 1363
AspS9I GGNCC 1 cut(s) 161
AsuC2I CCSGG 2 cut(s) 300, 301
AsuHPI GGTGA 3 cut(s) 91, 268, 1015
AvaI CYCGRG 1 cut(s) 299
AxyI CCTNAGG 1 cut(s) 951
BalI TGGCCA 1 cut(s) 124
BamHI GGATCC 2 cut(s) 247, 955
BanI GGYRCC 1 cut(s) 303
BanII GRGCYC 1 cut(s) 460
BauI CACGAG 1 cut(s) 996
BbsI GAAGAC 1 cut(s) 92
Bbv12I GWGCWC 2 cut(s) 36, 45
BbvI GCAGC 1 cut(s) 359
BccI CCATC 7 cut(s) 63, 508, 859, 1095, 1176, 1180, 1305
BciT130I CCWGG 3 cut(s) 108, 636, 1248
BclI TGATCA 3 cut(s) 414, 769, 886
BcnI CCSGG 2 cut(s) 300, 301
BcoDI GTCTC 4 cut(s) 414, 836, 1007, 1121
BfaI CTAG 4 cut(s) 189, 1236, 1302, 1402
BfoI RGCGCY 3 cut(s) 521, 902, 1364
BisI GCNGC 2 cut(s) 348, 652
BlsI GCNGC 2 cut(s) 349, 653
Bme1390I CCNGG 5 cut(s) 108, 300, 301, 636, 1248
BmeT110I CYCGRG 1 cut(s) 299
BmgT120I GGNCC 1 cut(s) 161
BmiI GGNNCC 5 cut(s) 249, 305, 361, 479, 957
BmrFI CCNGG 5 cut(s) 108, 300, 301, 636, 1248
BmrI ACTGGG 1 cut(s) 230
BmuI ACTGGG 1 cut(s) 230
BpiI GAAGAC 1 cut(s) 92
BplI GAGNNNNNCTC 2 cut(s) 447, 479
BpmI CTGGAG 1 cut(s) 90
BpuEI CTTGAG 3 cut(s) 137, 1003, 1047
BpuMI CCSGG 2 cut(s) 300, 301
Bsa29I ATCGAT 2 cut(s) 314, 807
BsaAI YACGTR 1 cut(s) 1149
BsaI GGTCTC 2 cut(s) 414, 1007
BsaJI CCNNGG 4 cut(s) 243, 299, 652, 1175
Bsc4I CCNNNNNNNGG 4 cut(s) 131, 220, 945, 966
Bse1I ACTGG 3 cut(s) 125, 225, 971
Bse21I CCTNAGG 1 cut(s) 951
Bse3DI GCAATG 2 cut(s) 342, 386
BseBI CCWGG 3 cut(s) 108, 636, 1248
BseCI ATCGAT 2 cut(s) 314, 807
BseDI CCNNGG 4 cut(s) 243, 299, 652, 1175
BseGI GGATG 5 cut(s) 267, 492, 889, 1106, 1191
BseLI CCNNNNNNNGG 4 cut(s) 131, 220, 945, 966
BseMI GCAATG 2 cut(s) 342, 386
BseMII CTCAG 3 cut(s) 478, 925, 942
BseNI ACTGG 3 cut(s) 125, 225, 971
BseXI GCAGC 1 cut(s) 359
BsgI GTGCAG 1 cut(s) 1358
Bsh1236I CGCG 1 cut(s) 654
BshFI GGCC 4 cut(s) 124, 162, 291, 949
BshNI GGYRCC 1 cut(s) 303
BshVI ATCGAT 2 cut(s) 314, 807
BsiHKAI GWGCWC 2 cut(s) 36, 45
BsiHKCI CYCGRG 1 cut(s) 299
BsiSI CCGG 1 cut(s) 300
BslI CCNNNNNNNGG 4 cut(s) 131, 220, 945, 966
BsmAI GTCTC 4 cut(s) 414, 836, 1007, 1121
BsmI GAATGC 1 cut(s) 575
BsnI GGCC 4 cut(s) 124, 162, 291, 949
Bso31I GGTCTC 2 cut(s) 414, 1007
BsoBI CYCGRG 1 cut(s) 299
Bsp1286I GDGCHC 3 cut(s) 36, 45, 460
Bsp143I GATC 8 cut(s) 247, 414, 628, 769, 808, 886, 955, 1156
Bsp19I CCATGG 2 cut(s) 243, 1175
BspACI CCGC 5 cut(s) 652, 654, 869, 988, 1001
BspANI GGCC 4 cut(s) 124, 162, 291, 949
BspCNI CTCAG 3 cut(s) 477, 924, 943
BspDI ATCGAT 2 cut(s) 314, 807
BspFNI CGCG 1 cut(s) 654
BspHI TCATGA 3 cut(s) 171, 450, 883
BspLI GGNNCC 5 cut(s) 249, 305, 361, 479, 957
BspPI GGATC 5 cut(s) 242, 255, 950, 963, 1151
BspT107I GGYRCC 1 cut(s) 303
BspTNI GGTCTC 2 cut(s) 414, 1007
BsrDI GCAATG 2 cut(s) 342, 386
BsrI ACTGG 3 cut(s) 125, 225, 971
BssECI CCNNGG 4 cut(s) 243, 299, 652, 1175
BssMI GATC 8 cut(s) 247, 414, 628, 769, 808, 886, 955, 1156
BssSI CACGAG 1 cut(s) 996
BssT1I CCWWGG 2 cut(s) 243, 1175
Bst2BI CACGAG 1 cut(s) 996
Bst2UI CCWGG 3 cut(s) 108, 636, 1248
Bst4CI ACNGT 2 cut(s) 235, 847
BstAPI GCANNNNNTGC 1 cut(s) 392
BstBAI YACGTR 1 cut(s) 1149
BstC8I GCNNGC 3 cut(s) 122, 393, 547
BstDEI CTNAG 4 cut(s) 65, 464, 911, 951
BstDSI CCRYGG 3 cut(s) 243, 652, 1175
BstF5I GGATG 5 cut(s) 267, 492, 889, 1106, 1191
BstFNI CGCG 1 cut(s) 654
BstH2I RGCGCY 3 cut(s) 521, 902, 1364
BstHHI GCGC 3 cut(s) 520, 901, 1363
BstKTI GATC 8 cut(s) 250, 417, 631, 772, 811, 889, 958, 1159
BstMAI GTCTC 4 cut(s) 414, 836, 1007, 1121
BstMBI GATC 8 cut(s) 247, 414, 628, 769, 808, 886, 955, 1156
BstMWI GCNNNNNNNGC 4 cut(s) 40, 117, 392, 935
BstNI CCWGG 3 cut(s) 108, 636, 1248
BstNSI RCATGY 2 cut(s) 688, 745
BstSCI CCNGG 5 cut(s) 106, 298, 299, 634, 1246
BstSNI TACGTA 1 cut(s) 1149
BstUI CGCG 1 cut(s) 654
BstV1I GCAGC 1 cut(s) 359
BstV2I GAAGAC 1 cut(s) 92
BstX2I RGATCY 2 cut(s) 247, 955
BstXI CCANNNNNNTGG 4 cut(s) 467, 514, 1101, 1182
BstYI RGATCY 2 cut(s) 247, 955
Bsu15I ATCGAT 2 cut(s) 314, 807
Bsu36I CCTNAGG 1 cut(s) 951
BsuRI GGCC 4 cut(s) 124, 162, 291, 949
BsuTUI ATCGAT 2 cut(s) 314, 807
BtgI CCRYGG 3 cut(s) 243, 652, 1175
BtsCI GGATG 5 cut(s) 267, 492, 889, 1106, 1191
BtsI GCAGTG 1 cut(s) 617
BtsIMutI CAGTG 3 cut(s) 472, 617, 789
Cac8I GCNNGC 3 cut(s) 122, 393, 547
CciI TCATGA 3 cut(s) 171, 450, 883
CfoI GCGC 3 cut(s) 520, 901, 1363
Cfr13I GGNCC 1 cut(s) 161
Cfr42I CCGCGG 1 cut(s) 655
Cfr9I CCCGGG 1 cut(s) 299
ClaI ATCGAT 2 cut(s) 314, 807
Csp6I GTAC 7 cut(s) 20, 85, 304, 373, 877, 1150, 1233
CviQI GTAC 7 cut(s) 20, 85, 304, 373, 877, 1150, 1233
DdeI CTNAG 4 cut(s) 65, 464, 911, 951
DpnI GATC 8 cut(s) 249, 416, 630, 771, 810, 888, 957, 1158
DpnII GATC 8 cut(s) 247, 414, 628, 769, 808, 886, 955, 1156
EaeI YGGCCR 1 cut(s) 122
Eco105I TACGTA 1 cut(s) 1149
Eco130I CCWWGG 2 cut(s) 243, 1175
Eco147I AGGCCT 2 cut(s) 291, 949
Eco24I GRGCYC 1 cut(s) 460
Eco31I GGTCTC 2 cut(s) 414, 1007
Eco32I GATATC 1 cut(s) 325
Eco47III AGCGCT 1 cut(s) 900
Eco57I CTGAAG 1 cut(s) 705
Eco81I CCTNAGG 1 cut(s) 951
Eco88I CYCGRG 1 cut(s) 299
EcoRII CCWGG 3 cut(s) 106, 634, 1246
EcoRV GATATC 1 cut(s) 325
EcoT14I CCWWGG 2 cut(s) 243, 1175
EcoT38I GRGCYC 1 cut(s) 460
ErhI CCWWGG 2 cut(s) 243, 1175
FalI AAGNNNNNCTT 4 cut(s) 703, 735, 729, 761
FbaI TGATCA 3 cut(s) 414, 769, 886
Fnu4HI GCNGC 2 cut(s) 348, 652
FokI GGATG 5 cut(s) 254, 479, 876, 1113, 1198
FriOI GRGCYC 1 cut(s) 460
Fsp4HI GCNGC 2 cut(s) 348, 652
FspBI CTAG 4 cut(s) 189, 1236, 1302, 1402
GlaI GCGC 3 cut(s) 519, 900, 1362
GluI GCNGC 2 cut(s) 348, 652
GsuI CTGGAG 1 cut(s) 90
HaeII RGCGCY 3 cut(s) 521, 902, 1364
HaeIII GGCC 4 cut(s) 124, 162, 291, 949
HapII CCGG 1 cut(s) 300
HhaI GCGC 3 cut(s) 520, 901, 1363
Hin6I GCGC 3 cut(s) 518, 899, 1361
HinP1I GCGC 3 cut(s) 518, 899, 1361
HindIII AAGCTT 2 cut(s) 166, 596
HinfI GANTC 4 cut(s) 554, 1107, 1139, 1202
HpaII CCGG 1 cut(s) 300
HphI GGTGA 3 cut(s) 91, 268, 1015
Hpy166II GTNNAC 4 cut(s) 259, 733, 993, 1146
Hpy188I TCNGA 6 cut(s) 419, 724, 774, 914, 935, 1395
Hpy188III TCNNGA 9 cut(s) 172, 251, 451, 580, 820, 884, 1012, 1020, 1064
Hpy8I GTNNAC 4 cut(s) 259, 733, 993, 1146
Hpy99I CGWCG 1 cut(s) 532
HpyAV CCTTC 4 cut(s) 88, 705, 890, 1177
HpyCH4III ACNGT 2 cut(s) 235, 847
HpyCH4IV ACGT 1 cut(s) 1148
HpyCH4V TGCA 3 cut(s) 347, 545, 1375
HpyF10VI GCNNNNNNNGC 4 cut(s) 40, 117, 392, 935
HpyF3I CTNAG 4 cut(s) 65, 464, 911, 951
HpySE526I ACGT 1 cut(s) 1148
HspAI GCGC 3 cut(s) 518, 899, 1361
KpnI GGTACC 1 cut(s) 307
Ksp22I TGATCA 3 cut(s) 414, 769, 886
KspI CCGCGG 1 cut(s) 655
Kzo9I GATC 8 cut(s) 247, 414, 628, 769, 808, 886, 955, 1156
LmnI GCTCC 1 cut(s) 365
Lsp1109I GCAGC 1 cut(s) 359
MaeI CTAG 4 cut(s) 189, 1236, 1302, 1402
MaeII ACGT 1 cut(s) 1148
MaeIII GTNAC 2 cut(s) 338, 1297
MalI GATC 8 cut(s) 249, 416, 630, 771, 810, 888, 957, 1158
MboI GATC 8 cut(s) 247, 414, 628, 769, 808, 886, 955, 1156
MflI RGATCY 2 cut(s) 247, 955
MhlI GDGCHC 3 cut(s) 36, 45, 460
MlsI TGGCCA 1 cut(s) 124
MluCI AATT 2 cut(s) 643, 1272
MluNI TGGCCA 1 cut(s) 124
MlyI GAGTC 1 cut(s) 1211
MmeI TCCRAC 1 cut(s) 300
Mox20I TGGCCA 1 cut(s) 124
MroXI GAANNNNTTC 1 cut(s) 715
MscI TGGCCA 1 cut(s) 124
MseI TTAA 3 cut(s) 534, 873, 1163
MslI CAYNNNNRTG 5 cut(s) 272, 465, 824, 860, 1180
Msp20I TGGCCA 1 cut(s) 124
MspA1I CMGCKG 2 cut(s) 350, 654
MspI CCGG 1 cut(s) 300
MspR9I CCNGG 5 cut(s) 108, 300, 301, 636, 1248
Mva1269I GAATGC 1 cut(s) 575
MvaI CCWGG 3 cut(s) 108, 636, 1248
MvnI CGCG 1 cut(s) 654
MwoI GCNNNNNNNGC 4 cut(s) 40, 117, 392, 935
NciI CCSGG 2 cut(s) 300, 301
NcoI CCATGG 2 cut(s) 243, 1175
NdeII GATC 8 cut(s) 247, 414, 628, 769, 808, 886, 955, 1156
NlaIV GGNNCC 5 cut(s) 249, 305, 361, 479, 957
NspI RCATGY 2 cut(s) 688, 745
OliI CACNNNNGTG 1 cut(s) 465
PagI TCATGA 3 cut(s) 171, 450, 883
PceI AGGCCT 2 cut(s) 291, 949
PctI GAATGC 1 cut(s) 575
PdmI GAANNNNTTC 1 cut(s) 715
PfeI GAWTC 3 cut(s) 554, 1107, 1139
PflMI CCANNNNNTGG 3 cut(s) 131, 220, 966
PfoI TCCNGGA 1 cut(s) 1246
PkrI GCNGC 2 cut(s) 349, 653
PleI GAGTC 1 cut(s) 1210
PpsI GAGTC 1 cut(s) 1210
Ppu21I YACGTR 1 cut(s) 1149
Psp6I CCWGG 3 cut(s) 106, 634, 1246
PspGI CCWGG 3 cut(s) 106, 634, 1246
PspN4I GGNNCC 5 cut(s) 249, 305, 361, 479, 957
PspPI GGNCC 1 cut(s) 161
PsuI RGATCY 2 cut(s) 247, 955
PvuII CAGCTG 1 cut(s) 350
RsaI GTAC 7 cut(s) 21, 86, 305, 374, 878, 1151, 1234
RsaNI GTAC 7 cut(s) 20, 85, 304, 373, 877, 1150, 1233
RseI CAYNNNNRTG 5 cut(s) 272, 465, 824, 860, 1180
SacII CCGCGG 1 cut(s) 655
SaqAI TTAA 3 cut(s) 534, 873, 1163
SatI GCNGC 2 cut(s) 348, 652
Sau3AI GATC 8 cut(s) 247, 414, 628, 769, 808, 886, 955, 1156
Sau96I GGNCC 1 cut(s) 161
SchI GAGTC 1 cut(s) 1211
ScrFI CCNGG 5 cut(s) 108, 300, 301, 636, 1248
SduI GDGCHC 3 cut(s) 36, 45, 460
Sfr303I CCGCGG 1 cut(s) 655
SgrBI CCGCGG 1 cut(s) 655
SmaI CCCGGG 1 cut(s) 301
SmiMI CAYNNNNRTG 5 cut(s) 272, 465, 824, 860, 1180
SmlI CTYRAG 3 cut(s) 152, 1018, 1062
SmoI CTYRAG 3 cut(s) 152, 1018, 1062
SnaBI TACGTA 1 cut(s) 1149
Sse9I AATT 2 cut(s) 643, 1272
SseBI AGGCCT 2 cut(s) 291, 949
SsiI CCGC 5 cut(s) 652, 654, 869, 988, 1001
SspI AATATT 1 cut(s) 676
SspMI CTAG 4 cut(s) 189, 1236, 1302, 1402
StuI AGGCCT 2 cut(s) 291, 949
StyD4I CCNGG 5 cut(s) 106, 298, 299, 634, 1246
StyI CCWWGG 2 cut(s) 243, 1175
TaaI ACNGT 2 cut(s) 235, 847
TaiI ACGT 1 cut(s) 1151
TaqI TCGA 5 cut(s) 314, 563, 807, 851, 1011
TaqII GACCGA 1 cut(s) 599
TasI AATT 2 cut(s) 643, 1272
TatI WGTACW 1 cut(s) 372
TauI GCSGC 1 cut(s) 654
TfiI GAWTC 3 cut(s) 554, 1107, 1139
Tru1I TTAA 3 cut(s) 534, 873, 1163
Tru9I TTAA 3 cut(s) 534, 873, 1163
TscAI CASTG 3 cut(s) 472, 624, 796
TseI GCWGC 1 cut(s) 347
TspDTI ATGAA 8 cut(s) 160, 188, 290, 344, 439, 810, 872, 1355
TspMI CCCGGG 1 cut(s) 299
TspRI CASTG 3 cut(s) 472, 624, 796
Van91I CCANNNNNTGG 3 cut(s) 131, 220, 966
XapI RAATTY 1 cut(s) 1272
XceI RCATGY 2 cut(s) 688, 745
XcmI CCANNNNNNNNNTGG 3 cut(s) 743, 862, 1066
XmaI CCCGGG 1 cut(s) 299
XmnI GAANNNNTTC 1 cut(s) 715
XspI CTAG 4 cut(s) 189, 1236, 1302, 1402
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.