MD17G1064800.v1.1

Cytochrome p450

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
Physical Location & Seq
Forward (+)
5247293 .. 5250190
2898 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1064800.v1.1.491

Sequence Viewer

Length: 1395 bp
ATGGCTGTCTTCATGATAGTGCTTATCTGTTTCCTCTGTTTGGTCTGCATCTGCTCTGCTCTTCTCAGATGGAATGAAGTTAGATACAGAAAGAAAGGCCTCCCTCCAGGCACAATGGGCTGGCCAGTCTTTGGTGAAACCACTGAGTTTCTCAAACAAGGCCCAAACTTCATGAAAAACCAGAGAGCAAGGTATGGGAGTTTCTTCAAATCCCACATATTGGGGTGCCCTACAGTGGTATCCATGGATCCAGAGGTGAACAGATACATCCTAATGAATGAAGCCAAAGGGCTGGTTCCTGGCTACCCACAATCCATGTTGGATATTTTGGGAAAATGCAACATTGCCGCAGTCCATGGCTCCACTCACAAGTACATGAGAGGCGCATTGCTTGCCCTCATTAACCCAACCGTGATCAGAGACCAGATTTTGCCCAAAATTGATGAGTTCATGACATCCCACCTCGCTGGCTGGGACAACCAAGTTATCAACATTCAAGAAAAAACCAAAGAGATGGCACTTTTATCATCTCTGAAGCAGATTGCAGGCATTGAATCAAGCTCAATTACTCCAGCATTCAAGACAGAGTTCTTCAAGCTTGTGCTAGGCACCCTTTCATTGCCTATTGATCTTCCTGGCACGAATTATTACCATGGTTTTCAGGCAAGGAAGAATATTGTAAGCATGTTGGAAAAACTCATAGAAGAGAGAAGGGCTTCCAAACAAGTTCATAAAGACATGCTTGGCTGCTTACTGACAAGTGATGAAAACAAACACAAACTCAGTGACGAAGAAATAATCGATATGGTCATCACGATTTTGTATTCGGGTTATGAGACGGTTTCCACTACTTCCATGATGGCTGTCAAGTACCTCCATGATCATCCCAAAGTGCTTGAAGAACTCAGAAAAGAGCAGTTAGCAATTAGAGAAAAGAAAAACCCAGAGGACCCAATTGACTGGAACGACTTGAAATCTATGAAGTTTACTCGTGCGGTAATATTTGAGACCTCAAGATTAGCTACAATTGTGAATGGGGTATTGAGAAAAACGACTCAAGATATGGAACTAAATGGATATTTGATTCCAAAAGGCTGGAGAATTTATGTGTATACAAGAGAGATTAATTATGACTCCTTTCTGTATCCGGAACCATTAACCTTCAATCCTTGGAGATGGCTGGACAAGAGCTTGGAGTGTTCAAACTATTTCTTTATATTTGGAGGGGGCACTAGGCTATGTCCAGGAAAGGAGCTGGGAATATCAGAAATTTCAACTTTCCTGCACTACTTTGTAACTAGATACAGGTGGGAAGAAGTTGGGGGAGACAAACTGATGAAATTTCCACGAGTAGAGGCACCGAATGGACTGCACCTTAGGGTTTCATCTTACTGA

Protein Analysis

465

Amino Acids

53.25

Weight (kDa)

8.75

Isoelectric Point (pI)

41.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 35 - 448 6e-58 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 225, 608, 1357
AccB7I CCANNNNNTGG 2 cut(s) 131, 220
AccI GTMKAC 1 cut(s) 1112
AccIII TCCGGA 1 cut(s) 1147
AciI CCGC 2 cut(s) 348, 995
AclWI GGATC 2 cut(s) 242, 255
AcoI YGGCCR 1 cut(s) 122
AcsI RAATTY 3 cut(s) 1101, 1269, 1340
AcuI CTGAAG 1 cut(s) 554
AfaI GTAC 2 cut(s) 374, 872
AfiI CCNNNNNNNGG 4 cut(s) 40, 131, 220, 235
AjnI CCWGG 4 cut(s) 106, 298, 634, 1243
AluBI AGCT 5 cut(s) 561, 598, 1022, 1191, 1255
AluI AGCT 5 cut(s) 561, 598, 1022, 1191, 1255
Alw26I GTCTC 4 cut(s) 414, 830, 1001, 1320
AlwI GGATC 2 cut(s) 242, 255
Aor13HI TCCGGA 1 cut(s) 1147
AoxI GGCC 3 cut(s) 97, 122, 160
ApeKI GCWGC 1 cut(s) 747
ApoI RAATTY 3 cut(s) 1101, 1269, 1340
AseI ATTAAT 1 cut(s) 1125
Asp700I GAANNNNTTC 1 cut(s) 715
AspLEI GCGC 1 cut(s) 386
AspS9I GGNCC 2 cut(s) 161, 949
AsuHPI GGTGA 2 cut(s) 146, 268
AvaII GGWCC 1 cut(s) 949
AxyI CCTNAGG 1 cut(s) 1376
BaeGI GKGCMC 2 cut(s) 230, 1232
BaeI ACNNNNGTAYC 2 cut(s) 222, 255
BalI TGGCCA 1 cut(s) 124
BamHI GGATCC 1 cut(s) 247
BanI GGYRCC 3 cut(s) 225, 608, 1357
BauI CACGAG 2 cut(s) 990, 1347
BbvI GCAGC 1 cut(s) 734
BccI CCATC 4 cut(s) 63, 508, 853, 1170
BcgI CGANNNNNNTGC 2 cut(s) 1351, 1385
BciT130I CCWGG 4 cut(s) 108, 300, 636, 1245
BciVI GTATCC 2 cut(s) 250, 1155
BclI TGATCA 2 cut(s) 414, 880
BcoDI GTCTC 4 cut(s) 414, 830, 1001, 1320
BfaI CTAG 3 cut(s) 605, 1233, 1299
BfmI CTRYAG 1 cut(s) 231
BfuI GTATCC 2 cut(s) 250, 1155
BisI GCNGC 2 cut(s) 348, 748
BlsI GCNGC 2 cut(s) 349, 749
Bme1390I CCNGG 4 cut(s) 108, 300, 636, 1245
Bme18I GGWCC 1 cut(s) 949
BmgT120I GGNCC 2 cut(s) 161, 949
BmiI GGNNCC 8 cut(s) 227, 249, 297, 361, 610, 951, 1152, 1359
BmrFI CCNGG 4 cut(s) 108, 300, 636, 1245
BmsI GCATC 1 cut(s) 57
BpmI CTGGAG 3 cut(s) 90, 555, 1117
BpuEI CTTGAG 2 cut(s) 997, 1041
Bsa29I ATCGAT 1 cut(s) 801
BsaI GGTCTC 2 cut(s) 414, 1001
BsaJI CCNNGG 4 cut(s) 243, 355, 652, 1169
BsaWI WCCGGW 1 cut(s) 1147
Bsc4I CCNNNNNNNGG 4 cut(s) 40, 131, 220, 235
Bse1I ACTGG 2 cut(s) 125, 965
Bse21I CCTNAGG 1 cut(s) 1376
Bse3DI GCAATG 3 cut(s) 342, 386, 617
BseAI TCCGGA 1 cut(s) 1147
BseBI CCWGG 4 cut(s) 108, 300, 636, 1245
BseCI ATCGAT 1 cut(s) 801
BseDI CCNNGG 4 cut(s) 243, 355, 652, 1169
BseGI GGATG 3 cut(s) 267, 455, 883
BseLI CCNNNNNNNGG 4 cut(s) 40, 131, 220, 235
BseMI GCAATG 3 cut(s) 342, 386, 617
BseMII CTCAG 4 cut(s) 79, 135, 796, 919
BseNI ACTGG 2 cut(s) 125, 965
BseSI GKGCMC 2 cut(s) 230, 1232
BseXI GCAGC 1 cut(s) 734
BseYI CCCAGC 2 cut(s) 471, 1255
BsgI GTGCAG 2 cut(s) 1268, 1355
BshFI GGCC 3 cut(s) 99, 124, 162
BshNI GGYRCC 3 cut(s) 225, 608, 1357
BshVI ATCGAT 1 cut(s) 801
BsiSI CCGG 1 cut(s) 1148
BslFI GGGAC 1 cut(s) 488
BslI CCNNNNNNNGG 4 cut(s) 40, 131, 220, 235
BsmAI GTCTC 4 cut(s) 414, 830, 1001, 1320
BsmBI CGTCTC 1 cut(s) 830
BsmFI GGGAC 1 cut(s) 488
BsmI GAATGC 1 cut(s) 575
BsnI GGCC 3 cut(s) 99, 124, 162
Bso31I GGTCTC 2 cut(s) 414, 1001
Bsp1286I GDGCHC 2 cut(s) 230, 1232
Bsp13I TCCGGA 1 cut(s) 1147
Bsp143I GATC 4 cut(s) 247, 414, 628, 880
Bsp19I CCATGG 3 cut(s) 243, 355, 652
BspACI CCGC 2 cut(s) 348, 995
BspANI GGCC 3 cut(s) 99, 124, 162
BspCNI CTCAG 4 cut(s) 78, 136, 795, 918
BspDI ATCGAT 1 cut(s) 801
BspEI TCCGGA 1 cut(s) 1147
BspHI TCATGA 3 cut(s) 12, 171, 450
BspLI GGNNCC 8 cut(s) 227, 249, 297, 361, 610, 951, 1152, 1359
BspPI GGATC 2 cut(s) 242, 255
BspQI GCTCTTC 1 cut(s) 66
BspT107I GGYRCC 3 cut(s) 225, 608, 1357
BspTNI GGTCTC 2 cut(s) 414, 1001
BsrDI GCAATG 3 cut(s) 342, 386, 617
BsrI ACTGG 2 cut(s) 125, 965
BssECI CCNNGG 4 cut(s) 243, 355, 652, 1169
BssMI GATC 4 cut(s) 247, 414, 628, 880
BssNAI GTATAC 1 cut(s) 1113
BssSI CACGAG 2 cut(s) 990, 1347
BssT1I CCWWGG 4 cut(s) 243, 355, 652, 1169
Bst1107I GTATAC 1 cut(s) 1113
Bst2BI CACGAG 2 cut(s) 990, 1347
Bst2UI CCWGG 4 cut(s) 108, 300, 636, 1245
Bst4CI ACNGT 3 cut(s) 235, 412, 841
Bst6I CTCTTC 2 cut(s) 66, 699
BstAPI GCANNNNNTGC 1 cut(s) 392
BstC8I GCNNGC 4 cut(s) 122, 393, 469, 547
BstDEI CTNAG 5 cut(s) 65, 144, 782, 905, 1376
BstDSI CCRYGG 3 cut(s) 243, 355, 652
BstF5I GGATG 3 cut(s) 267, 455, 883
BstHHI GCGC 1 cut(s) 386
BstKTI GATC 4 cut(s) 250, 417, 631, 883
BstMAI GTCTC 4 cut(s) 414, 830, 1001, 1320
BstMBI GATC 4 cut(s) 247, 414, 628, 880
BstMWI GCNNNNNNNGC 2 cut(s) 117, 392
BstNI CCWGG 4 cut(s) 108, 300, 636, 1245
BstNSI RCATGY 2 cut(s) 688, 742
BstSCI CCNGG 4 cut(s) 106, 298, 634, 1243
BstSFI CTRYAG 1 cut(s) 231
BstSLI GKGCMC 2 cut(s) 230, 1232
BstV1I GCAGC 1 cut(s) 734
BstX2I RGATCY 1 cut(s) 247
BstXI CCANNNNNNTGG 5 cut(s) 292, 467, 514, 960, 1095
BstYI RGATCY 1 cut(s) 247
BstZ17I GTATAC 1 cut(s) 1113
Bsu15I ATCGAT 1 cut(s) 801
Bsu36I CCTNAGG 1 cut(s) 1376
BsuI GTATCC 2 cut(s) 250, 1155
BsuRI GGCC 3 cut(s) 99, 124, 162
BsuTUI ATCGAT 1 cut(s) 801
BtgI CCRYGG 3 cut(s) 243, 355, 652
BtsCI GGATG 3 cut(s) 267, 455, 883
BtsIMutI CAGTG 3 cut(s) 141, 240, 790
Cac8I GCNNGC 4 cut(s) 122, 393, 469, 547
CciI TCATGA 3 cut(s) 12, 171, 450
CfoI GCGC 1 cut(s) 386
Cfr13I GGNCC 2 cut(s) 161, 949
ClaI ATCGAT 1 cut(s) 801
Csp6I GTAC 2 cut(s) 373, 871
CviQI GTAC 2 cut(s) 373, 871
DdeI CTNAG 5 cut(s) 65, 144, 782, 905, 1376
DpnI GATC 4 cut(s) 249, 416, 630, 882
DpnII GATC 4 cut(s) 247, 414, 628, 880
EaeI YGGCCR 1 cut(s) 122
Eam1104I CTCTTC 2 cut(s) 66, 699
EarI CTCTTC 2 cut(s) 66, 699
Eco130I CCWWGG 4 cut(s) 243, 355, 652, 1169
Eco147I AGGCCT 1 cut(s) 99
Eco31I GGTCTC 2 cut(s) 414, 1001
Eco47I GGWCC 1 cut(s) 949
Eco57I CTGAAG 1 cut(s) 554
Eco81I CCTNAGG 1 cut(s) 1376
EcoO109I RGGNCCY 1 cut(s) 949
EcoRII CCWGG 4 cut(s) 106, 298, 634, 1243
EcoT14I CCWWGG 4 cut(s) 243, 355, 652, 1169
ErhI CCWWGG 4 cut(s) 243, 355, 652, 1169
Esp3I CGTCTC 1 cut(s) 830
FalI AAGNNNNNCTT 2 cut(s) 726, 758
FaqI GGGAC 1 cut(s) 488
FbaI TGATCA 2 cut(s) 414, 880
FblI GTMKAC 1 cut(s) 1112
Fnu4HI GCNGC 2 cut(s) 348, 748
FokI GGATG 3 cut(s) 254, 442, 870
Fsp4HI GCNGC 2 cut(s) 348, 748
FspBI CTAG 3 cut(s) 605, 1233, 1299
GlaI GCGC 1 cut(s) 385
GluI GCNGC 2 cut(s) 348, 748
GsaI CCCAGC 2 cut(s) 475, 1259
GsuI CTGGAG 3 cut(s) 90, 555, 1117
HaeIII GGCC 3 cut(s) 99, 124, 162
HapII CCGG 1 cut(s) 1148
HhaI GCGC 1 cut(s) 386
Hin6I GCGC 1 cut(s) 384
HinP1I GCGC 1 cut(s) 384
HindIII AAGCTT 1 cut(s) 596
HinfI GANTC 4 cut(s) 554, 1054, 1084, 1133
HpaII CCGG 1 cut(s) 1148
HphI GGTGA 2 cut(s) 146, 268
Hpy166II GTNNAC 3 cut(s) 259, 987, 1113
Hpy188I TCNGA 5 cut(s) 68, 419, 534, 908, 1267
Hpy8I GTNNAC 3 cut(s) 259, 987, 1113
HpyAV CCTTC 2 cut(s) 705, 1171
HpyCH4III ACNGT 3 cut(s) 235, 412, 841
HpyCH4V TGCA 5 cut(s) 48, 339, 545, 1285, 1372
HpyF10VI GCNNNNNNNGC 2 cut(s) 117, 392
HpyF3I CTNAG 5 cut(s) 65, 144, 782, 905, 1376
HspAI GCGC 1 cut(s) 384
Kpn2I TCCGGA 1 cut(s) 1147
Ksp22I TGATCA 2 cut(s) 414, 880
Kzo9I GATC 4 cut(s) 247, 414, 628, 880
LguI GCTCTTC 1 cut(s) 66
LmnI GCTCC 2 cut(s) 365, 1252
Lsp1109I GCAGC 1 cut(s) 734
LweI GCATC 1 cut(s) 57
MaeI CTAG 3 cut(s) 605, 1233, 1299
MaeIII GTNAC 2 cut(s) 785, 1294
MalI GATC 4 cut(s) 249, 416, 630, 882
MboI GATC 4 cut(s) 247, 414, 628, 880
MboII GAAGA 9 cut(s) 53, 196, 583, 623, 682, 716, 803, 911, 1325
MfeI CAATTG 2 cut(s) 954, 1026
MflI RGATCY 1 cut(s) 247
MhlI GDGCHC 2 cut(s) 230, 1232
MlsI TGGCCA 1 cut(s) 124
MluNI TGGCCA 1 cut(s) 124
MlyI GAGTC 2 cut(s) 1048, 1127
MmeI TCCRAC 2 cut(s) 300, 669
Mox20I TGGCCA 1 cut(s) 124
MroI TCCGGA 1 cut(s) 1147
MroXI GAANNNNTTC 1 cut(s) 715
MscI TGGCCA 1 cut(s) 124
MseI TTAA 3 cut(s) 402, 1125, 1157
MslI CAYNNNNRTG 2 cut(s) 17, 272
Msp20I TGGCCA 1 cut(s) 124
MspI CCGG 1 cut(s) 1148
MspR9I CCNGG 4 cut(s) 108, 300, 636, 1245
MunI CAATTG 2 cut(s) 954, 1026
Mva1269I GAATGC 1 cut(s) 575
MvaI CCWGG 4 cut(s) 108, 300, 636, 1245
MwoI GCNNNNNNNGC 2 cut(s) 117, 392
NcoI CCATGG 3 cut(s) 243, 355, 652
NdeII GATC 4 cut(s) 247, 414, 628, 880
NlaIV GGNNCC 8 cut(s) 227, 249, 297, 361, 610, 951, 1152, 1359
NmuCI GTSAC 1 cut(s) 785
NspI RCATGY 2 cut(s) 688, 742
PagI TCATGA 3 cut(s) 12, 171, 450
PceI AGGCCT 1 cut(s) 99
PciSI GCTCTTC 1 cut(s) 66
PctI GAATGC 1 cut(s) 575
PdmI GAANNNNTTC 1 cut(s) 715
PfeI GAWTC 2 cut(s) 554, 1084
PflMI CCANNNNNTGG 2 cut(s) 131, 220
PfoI TCCNGGA 1 cut(s) 1243
PkrI GCNGC 2 cut(s) 349, 749
PleI GAGTC 2 cut(s) 1048, 1127
PpsI GAGTC 2 cut(s) 1048, 1127
PpuMI RGGWCCY 1 cut(s) 949
PshBI ATTAAT 1 cut(s) 1125
Psp5II RGGWCCY 1 cut(s) 949
Psp6I CCWGG 4 cut(s) 106, 298, 634, 1243
PspFI CCCAGC 2 cut(s) 471, 1255
PspGI CCWGG 4 cut(s) 106, 298, 634, 1243
PspN4I GGNNCC 8 cut(s) 227, 249, 297, 361, 610, 951, 1152, 1359
PspPI GGNCC 2 cut(s) 161, 949
PspPPI RGGWCCY 1 cut(s) 949
PsuI RGATCY 1 cut(s) 247
RsaI GTAC 2 cut(s) 374, 872
RsaNI GTAC 2 cut(s) 373, 871
RseI CAYNNNNRTG 2 cut(s) 17, 272
SapI GCTCTTC 1 cut(s) 66
SaqAI TTAA 3 cut(s) 402, 1125, 1157
SatI GCNGC 2 cut(s) 348, 748
Sau3AI GATC 4 cut(s) 247, 414, 628, 880
Sau96I GGNCC 2 cut(s) 161, 949
SchI GAGTC 2 cut(s) 1048, 1127
ScrFI CCNGG 4 cut(s) 108, 300, 636, 1245
SduI GDGCHC 2 cut(s) 230, 1232
SfaNI GCATC 1 cut(s) 57
SfcI CTRYAG 1 cut(s) 231
SinI GGWCC 1 cut(s) 949
SmiMI CAYNNNNRTG 2 cut(s) 17, 272
SmlI CTYRAG 2 cut(s) 1012, 1056
SmoI CTYRAG 2 cut(s) 1012, 1056
SseBI AGGCCT 1 cut(s) 99
SsiI CCGC 2 cut(s) 348, 995
SspI AATATT 2 cut(s) 676, 1002
SspMI CTAG 3 cut(s) 605, 1233, 1299
StuI AGGCCT 1 cut(s) 99
StyD4I CCNGG 4 cut(s) 106, 298, 634, 1243
StyI CCWWGG 4 cut(s) 243, 355, 652, 1169
TaaI ACNGT 3 cut(s) 235, 412, 841
TaqI TCGA 1 cut(s) 801
TatI WGTACW 1 cut(s) 372
TauI GCSGC 1 cut(s) 350
TfiI GAWTC 2 cut(s) 554, 1084
Tru1I TTAA 3 cut(s) 402, 1125, 1157
Tru9I TTAA 3 cut(s) 402, 1125, 1157
TscAI CASTG 3 cut(s) 148, 240, 790
TseFI GTSAC 1 cut(s) 785
TseI GCWGC 1 cut(s) 747
Tsp45I GTSAC 1 cut(s) 785
TspRI CASTG 3 cut(s) 148, 240, 790
Van91I CCANNNNNTGG 2 cut(s) 131, 220
VpaK11BI GGWCC 1 cut(s) 949
VspI ATTAAT 1 cut(s) 1125
XapI RAATTY 3 cut(s) 1101, 1269, 1340
XceI RCATGY 2 cut(s) 688, 742
XmiI GTMKAC 1 cut(s) 1112
XmnI GAANNNNTTC 1 cut(s) 715
XspI CTAG 3 cut(s) 605, 1233, 1299
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.