Rh2DG602200

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
Physical Location & Seq
Forward (+)
83411919 .. 83415055
3137 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG602200.1

Sequence Viewer

Length: 1278 bp
ATGCTCTCTCTCCTTTCTTCTCTCTTCAGAGCATCAATGGCTGTGTTTGTGGTGGTACTACTCTGTGTGATCTTTGTGCTCTGTTTCTGCTCTGCTTTGCTAAGATGGAATGAGGTGAGGTACAGGAAGAAGGGTCTTCCTCCAGGCACAATGGGCTGGCCAGTCTTTGGAGAAACCACAGAGTTCCTCAAGCAAGGCCCAAGCTTCATGAAAAACCAGAGAGCTAGGTATGGTAGTTTTTTCAAATCCCACATACTGGGGTGTCCTACCGTAGTTTCCATGGATCCAGAGGTGAACAGATACATCCTAATGAACGAAGCTAAAGGCCTCGTTCCCGGGTACCCTCAATCGATGTTGGATATCTTGGGCAAGTGTAACATTGCAGCTGTTCATGGCTCCACTCACAAGTACATGAGAGGGGCATTGCTTGCCCTCATTAGCTCAACCATGATCAGAGACCAGATTTTGCCCAAGATTGATGACTTCATGAGAGCCCACCTCAGTGGTTGGGGGAACCAAGTCATCAACATCCAAGAAAAGACCAAAGAGATGGCGCTTCTTTCGTCGCTTAAACAGATTGCAGGCATTGAATCAAGCTCGATTTCTCAGGCATTCAAGACCGACTTCTTCAAGCTTGTGTTGGGAACTCTCTCATTGCCCATTGATCTTCCTGGCACAAATTATCGCCGCGGATTTCAGGCGAGGAAAAATATTGTTAGCATGTTGAAGCAACTAATAGAAGATAGAAGGGCTTCTTCAGAGGAAGTCCACCAAGACATGCTTGGTGGATTGATGAGAAGTGATGATCAGAACAGATACAAACTCACTGATGAAGAAATAATCGATCACATCATCACGATTATGTATTCGGGCTATGAGACTGTTTCGACCACATCAATGATGGCGGTTAAGTACCTTCATGATCATCCACAAGCGATTGAAGAACTCAGAAAAGAACATTTGGCAATCAGAGCCAGAAAAAGGCTCGAGGATCCCATTGACTGGAATGACCTGAAATCTATGCGGTTTACTCGTGCGGTGATATTTGAGACCTCAAGATTAGCTACTATTGTAAATGGGGTTTTGAGGAAAACCACTCAAGATATGGAACTAAATGGGTTTTTGATACCAAAAGGATGGAGAATCTATGTTTATACAAGAGAGACTAACTATGATTCGTTTACGTACCCTGATCCATTAACCTTCAATCCATGGAGATGGTTGGTGAGTTTCACTGTGACTCTATTTTCATGGAAATGTATCAGATTCATTTTCTAG

Protein Analysis

425

Amino Acids

48.85

Weight (kDa)

9.34

Isoelectric Point (pI)

40.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 47 - 408 2.9e-43 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 339
AccB1I GGYRCC 1 cut(s) 339
AccB7I CCANNNNNTGG 3 cut(s) 167, 256, 1002
AccII CGCG 1 cut(s) 690
AciI CCGC 5 cut(s) 688, 690, 905, 1024, 1037
AclWI GGATC 5 cut(s) 278, 291, 986, 999, 1187
AcoI YGGCCR 1 cut(s) 158
AcuI CTGAAG 2 cut(s) 10, 741
AfaI GTAC 6 cut(s) 57, 122, 341, 410, 914, 1187
AfiI CCNNNNNNNGG 4 cut(s) 167, 256, 981, 1002
AgsI TTSAA 7 cut(s) 244, 590, 616, 631, 727, 941, 1207
AjnI CCWGG 2 cut(s) 142, 670
AleI CACNNNNGTG 1 cut(s) 501
AluBI AGCT 8 cut(s) 204, 224, 320, 386, 441, 597, 634, 1064
AluI AGCT 8 cut(s) 204, 224, 320, 386, 441, 597, 634, 1064
Alw21I GWGCWC 1 cut(s) 81
Alw26I GTCTC 4 cut(s) 450, 872, 1043, 1157
AlwI GGATC 5 cut(s) 278, 291, 986, 999, 1187
Ama87I CYCGRG 2 cut(s) 335, 986
AoxI GGCC 3 cut(s) 158, 196, 325
ApeKI GCWGC 1 cut(s) 383
Asp700I GAANNNNTTC 1 cut(s) 751
Asp718I GGTACC 1 cut(s) 339
AspLEI GCGC 1 cut(s) 556
AspS9I GGNCC 1 cut(s) 197
AsuC2I CCSGG 2 cut(s) 336, 337
AsuHPI GGTGA 4 cut(s) 127, 304, 1051, 1237
AvaI CYCGRG 2 cut(s) 335, 986
BalI TGGCCA 1 cut(s) 160
BamHI GGATCC 2 cut(s) 283, 991
BanI GGYRCC 1 cut(s) 339
BanII GRGCYC 1 cut(s) 496
BauI CACGAG 1 cut(s) 1032
BbsI GAAGAC 1 cut(s) 128
Bbv12I GWGCWC 1 cut(s) 81
BbvI GCAGC 1 cut(s) 395
BccI CCATC 5 cut(s) 99, 544, 895, 1131, 1212
BciT130I CCWGG 2 cut(s) 144, 672
BclI TGATCA 3 cut(s) 450, 805, 922
BcnI CCSGG 2 cut(s) 336, 337
BcoDI GTCTC 4 cut(s) 450, 872, 1043, 1157
BfaI CTAG 2 cut(s) 225, 1276
BfoI RGCGCY 1 cut(s) 557
BisI GCNGC 2 cut(s) 384, 688
BlsI GCNGC 2 cut(s) 385, 689
Bme1390I CCNGG 4 cut(s) 144, 336, 337, 672
BmeT110I CYCGRG 2 cut(s) 335, 986
BmgT120I GGNCC 1 cut(s) 197
BmiI GGNNCC 5 cut(s) 285, 341, 397, 515, 993
BmrFI CCNGG 4 cut(s) 144, 336, 337, 672
BmrI ACTGGG 1 cut(s) 266
BmsI GCATC 1 cut(s) 41
BmuI ACTGGG 1 cut(s) 266
BpiI GAAGAC 1 cut(s) 128
BplI GAGNNNNNCTC 2 cut(s) 483, 515
BpmI CTGGAG 1 cut(s) 126
BpuEI CTTGAG 3 cut(s) 173, 1039, 1083
BpuMI CCSGG 2 cut(s) 336, 337
Bsa29I ATCGAT 2 cut(s) 350, 843
BsaAI YACGTR 1 cut(s) 1185
BsaI GGTCTC 2 cut(s) 450, 1043
BsaJI CCNNGG 4 cut(s) 279, 335, 688, 1211
Bsc4I CCNNNNNNNGG 4 cut(s) 167, 256, 981, 1002
Bse1I ACTGG 3 cut(s) 161, 261, 1007
Bse3DI GCAATG 3 cut(s) 378, 422, 653
BseBI CCWGG 2 cut(s) 144, 672
BseCI ATCGAT 2 cut(s) 350, 843
BseDI CCNNGG 4 cut(s) 279, 335, 688, 1211
BseGI GGATG 4 cut(s) 303, 528, 925, 1142
BseLI CCNNNNNNNGG 4 cut(s) 167, 256, 981, 1002
BseMI GCAATG 3 cut(s) 378, 422, 653
BseMII CTCAG 3 cut(s) 514, 620, 961
BseNI ACTGG 3 cut(s) 161, 261, 1007
BseXI GCAGC 1 cut(s) 395
Bsh1236I CGCG 1 cut(s) 690
BshFI GGCC 3 cut(s) 160, 198, 327
BshNI GGYRCC 1 cut(s) 339
BshVI ATCGAT 2 cut(s) 350, 843
BsiHKAI GWGCWC 1 cut(s) 81
BsiHKCI CYCGRG 2 cut(s) 335, 986
BsiSI CCGG 1 cut(s) 336
BslI CCNNNNNNNGG 4 cut(s) 167, 256, 981, 1002
BsmAI GTCTC 4 cut(s) 450, 872, 1043, 1157
BsmI GAATGC 1 cut(s) 611
BsnI GGCC 3 cut(s) 160, 198, 327
Bso31I GGTCTC 2 cut(s) 450, 1043
BsoBI CYCGRG 2 cut(s) 335, 986
Bsp1286I GDGCHC 2 cut(s) 81, 496
Bsp143I GATC 9 cut(s) 69, 283, 450, 664, 805, 844, 922, 991, 1192
Bsp19I CCATGG 2 cut(s) 279, 1211
BspACI CCGC 5 cut(s) 688, 690, 905, 1024, 1037
BspANI GGCC 3 cut(s) 160, 198, 327
BspCNI CTCAG 3 cut(s) 513, 619, 960
BspDI ATCGAT 2 cut(s) 350, 843
BspFNI CGCG 1 cut(s) 690
BspHI TCATGA 3 cut(s) 207, 486, 919
BspLI GGNNCC 5 cut(s) 285, 341, 397, 515, 993
BspPI GGATC 5 cut(s) 278, 291, 986, 999, 1187
BspT107I GGYRCC 1 cut(s) 339
BspTNI GGTCTC 2 cut(s) 450, 1043
BsrDI GCAATG 3 cut(s) 378, 422, 653
BsrI ACTGG 3 cut(s) 161, 261, 1007
BssECI CCNNGG 4 cut(s) 279, 335, 688, 1211
BssMI GATC 9 cut(s) 69, 283, 450, 664, 805, 844, 922, 991, 1192
BssSI CACGAG 1 cut(s) 1032
BssT1I CCWWGG 2 cut(s) 279, 1211
Bst2BI CACGAG 1 cut(s) 1032
Bst2UI CCWGG 2 cut(s) 144, 672
Bst4CI ACNGT 3 cut(s) 271, 883, 1237
Bst6I CTCTTC 1 cut(s) 29
BstAPI GCANNNNNTGC 1 cut(s) 428
BstBAI YACGTR 1 cut(s) 1185
BstC8I GCNNGC 3 cut(s) 158, 429, 583
BstDEI CTNAG 4 cut(s) 101, 500, 606, 947
BstDSI CCRYGG 3 cut(s) 279, 688, 1211
BstF5I GGATG 4 cut(s) 303, 528, 925, 1142
BstFNI CGCG 1 cut(s) 690
BstH2I RGCGCY 1 cut(s) 557
BstHHI GCGC 1 cut(s) 556
BstKTI GATC 9 cut(s) 72, 286, 453, 667, 808, 847, 925, 994, 1195
BstMAI GTCTC 4 cut(s) 450, 872, 1043, 1157
BstMBI GATC 9 cut(s) 69, 283, 450, 664, 805, 844, 922, 991, 1192
BstMWI GCNNNNNNNGC 4 cut(s) 38, 153, 428, 971
BstNI CCWGG 2 cut(s) 144, 672
BstNSI RCATGY 2 cut(s) 724, 781
BstSCI CCNGG 4 cut(s) 142, 334, 335, 670
BstSNI TACGTA 1 cut(s) 1185
BstUI CGCG 1 cut(s) 690
BstV1I GCAGC 1 cut(s) 395
BstV2I GAAGAC 1 cut(s) 128
BstX2I RGATCY 2 cut(s) 283, 991
BstXI CCANNNNNNTGG 4 cut(s) 503, 550, 1137, 1218
BstYI RGATCY 2 cut(s) 283, 991
Bsu15I ATCGAT 2 cut(s) 350, 843
BsuRI GGCC 3 cut(s) 160, 198, 327
BsuTUI ATCGAT 2 cut(s) 350, 843
BtgI CCRYGG 3 cut(s) 279, 688, 1211
BtsCI GGATG 4 cut(s) 303, 528, 925, 1142
BtsIMutI CAGTG 3 cut(s) 508, 825, 1233
Cac8I GCNNGC 3 cut(s) 158, 429, 583
CciI TCATGA 3 cut(s) 207, 486, 919
CfoI GCGC 1 cut(s) 556
Cfr13I GGNCC 1 cut(s) 197
Cfr42I CCGCGG 1 cut(s) 691
Cfr9I CCCGGG 1 cut(s) 335
ClaI ATCGAT 2 cut(s) 350, 843
Csp6I GTAC 6 cut(s) 56, 121, 340, 409, 913, 1186
CviQI GTAC 6 cut(s) 56, 121, 340, 409, 913, 1186
DdeI CTNAG 4 cut(s) 101, 500, 606, 947
DpnI GATC 9 cut(s) 71, 285, 452, 666, 807, 846, 924, 993, 1194
DpnII GATC 9 cut(s) 69, 283, 450, 664, 805, 844, 922, 991, 1192
EaeI YGGCCR 1 cut(s) 158
Eam1104I CTCTTC 1 cut(s) 29
EarI CTCTTC 1 cut(s) 29
Eco105I TACGTA 1 cut(s) 1185
Eco130I CCWWGG 2 cut(s) 279, 1211
Eco147I AGGCCT 1 cut(s) 327
Eco24I GRGCYC 1 cut(s) 496
Eco31I GGTCTC 2 cut(s) 450, 1043
Eco32I GATATC 1 cut(s) 361
Eco57I CTGAAG 2 cut(s) 10, 741
Eco88I CYCGRG 2 cut(s) 335, 986
EcoRII CCWGG 2 cut(s) 142, 670
EcoRV GATATC 1 cut(s) 361
EcoT14I CCWWGG 2 cut(s) 279, 1211
EcoT38I GRGCYC 1 cut(s) 496
ErhI CCWWGG 2 cut(s) 279, 1211
FalI AAGNNNNNCTT 6 cut(s) 608, 640, 739, 771, 765, 797
FbaI TGATCA 3 cut(s) 450, 805, 922
Fnu4HI GCNGC 2 cut(s) 384, 688
FokI GGATG 4 cut(s) 290, 515, 912, 1149
FriOI GRGCYC 1 cut(s) 496
Fsp4HI GCNGC 2 cut(s) 384, 688
FspBI CTAG 2 cut(s) 225, 1276
GlaI GCGC 1 cut(s) 555
GluI GCNGC 2 cut(s) 384, 688
GsuI CTGGAG 1 cut(s) 126
HaeII RGCGCY 1 cut(s) 557
HaeIII GGCC 3 cut(s) 160, 198, 327
HapII CCGG 1 cut(s) 336
HhaI GCGC 1 cut(s) 556
Hin6I GCGC 1 cut(s) 554
HinP1I GCGC 1 cut(s) 554
HindIII AAGCTT 2 cut(s) 202, 632
HinfI GANTC 5 cut(s) 590, 1143, 1175, 1240, 1266
HpaII CCGG 1 cut(s) 336
HphI GGTGA 4 cut(s) 127, 304, 1051, 1237
Hpy166II GTNNAC 4 cut(s) 295, 769, 1029, 1182
Hpy188I TCNGA 7 cut(s) 29, 455, 760, 810, 950, 971, 1265
Hpy188III TCNNGA 8 cut(s) 208, 287, 487, 616, 856, 920, 1056, 1100
Hpy8I GTNNAC 4 cut(s) 295, 769, 1029, 1182
Hpy99I CGWCG 1 cut(s) 568
HpyAV CCTTC 4 cut(s) 124, 741, 926, 1213
HpyCH4III ACNGT 3 cut(s) 271, 883, 1237
HpyCH4IV ACGT 1 cut(s) 1184
HpyCH4V TGCA 2 cut(s) 383, 581
HpyF10VI GCNNNNNNNGC 4 cut(s) 38, 153, 428, 971
HpyF3I CTNAG 4 cut(s) 101, 500, 606, 947
HpySE526I ACGT 1 cut(s) 1184
HspAI GCGC 1 cut(s) 554
KpnI GGTACC 1 cut(s) 343
Ksp22I TGATCA 3 cut(s) 450, 805, 922
KspI CCGCGG 1 cut(s) 691
Kzo9I GATC 9 cut(s) 69, 283, 450, 664, 805, 844, 922, 991, 1192
LmnI GCTCC 1 cut(s) 401
Lsp1109I GCAGC 1 cut(s) 395
LweI GCATC 1 cut(s) 41
MaeI CTAG 2 cut(s) 225, 1276
MaeII ACGT 1 cut(s) 1184
MaeIII GTNAC 2 cut(s) 374, 1237
MalI GATC 9 cut(s) 71, 285, 452, 666, 807, 846, 924, 993, 1194
MboI GATC 9 cut(s) 69, 283, 450, 664, 805, 844, 922, 991, 1192
MflI RGATCY 2 cut(s) 283, 991
MhlI GDGCHC 2 cut(s) 81, 496
MlsI TGGCCA 1 cut(s) 160
MluCI AATT 1 cut(s) 679
MluNI TGGCCA 1 cut(s) 160
MlyI GAGTC 1 cut(s) 1234
MmeI TCCRAC 1 cut(s) 336
Mox20I TGGCCA 1 cut(s) 160
MroXI GAANNNNTTC 1 cut(s) 751
MscI TGGCCA 1 cut(s) 160
MseI TTAA 3 cut(s) 570, 909, 1199
MslI CAYNNNNRTG 6 cut(s) 308, 501, 860, 896, 1216, 1255
Msp20I TGGCCA 1 cut(s) 160
MspA1I CMGCKG 2 cut(s) 386, 690
MspI CCGG 1 cut(s) 336
MspR9I CCNGG 4 cut(s) 144, 336, 337, 672
Mva1269I GAATGC 1 cut(s) 611
MvaI CCWGG 2 cut(s) 144, 672
MvnI CGCG 1 cut(s) 690
MwoI GCNNNNNNNGC 4 cut(s) 38, 153, 428, 971
NciI CCSGG 2 cut(s) 336, 337
NcoI CCATGG 2 cut(s) 279, 1211
NdeII GATC 9 cut(s) 69, 283, 450, 664, 805, 844, 922, 991, 1192
NlaIV GGNNCC 5 cut(s) 285, 341, 397, 515, 993
NmuCI GTSAC 1 cut(s) 1237
NspI RCATGY 2 cut(s) 724, 781
OliI CACNNNNGTG 1 cut(s) 501
PaeR7I CTCGAG 1 cut(s) 986
PagI TCATGA 3 cut(s) 207, 486, 919
PceI AGGCCT 1 cut(s) 327
PctI GAATGC 1 cut(s) 611
PdmI GAANNNNTTC 1 cut(s) 751
PfeI GAWTC 4 cut(s) 590, 1143, 1175, 1266
PflMI CCANNNNNTGG 3 cut(s) 167, 256, 1002
PkrI GCNGC 2 cut(s) 385, 689
PleI GAGTC 1 cut(s) 1234
PpsI GAGTC 1 cut(s) 1234
Ppu21I YACGTR 1 cut(s) 1185
Psp6I CCWGG 2 cut(s) 142, 670
PspGI CCWGG 2 cut(s) 142, 670
PspN4I GGNNCC 5 cut(s) 285, 341, 397, 515, 993
PspPI GGNCC 1 cut(s) 197
PspXI VCTCGAGB 1 cut(s) 986
PsuI RGATCY 2 cut(s) 283, 991
PvuII CAGCTG 1 cut(s) 386
RsaI GTAC 6 cut(s) 57, 122, 341, 410, 914, 1187
RsaNI GTAC 6 cut(s) 56, 121, 340, 409, 913, 1186
RseI CAYNNNNRTG 6 cut(s) 308, 501, 860, 896, 1216, 1255
SacII CCGCGG 1 cut(s) 691
SaqAI TTAA 3 cut(s) 570, 909, 1199
SatI GCNGC 2 cut(s) 384, 688
Sau3AI GATC 9 cut(s) 69, 283, 450, 664, 805, 844, 922, 991, 1192
Sau96I GGNCC 1 cut(s) 197
SchI GAGTC 1 cut(s) 1234
ScrFI CCNGG 4 cut(s) 144, 336, 337, 672
SduI GDGCHC 2 cut(s) 81, 496
SfaNI GCATC 1 cut(s) 41
Sfr274I CTCGAG 1 cut(s) 986
Sfr303I CCGCGG 1 cut(s) 691
SgrBI CCGCGG 1 cut(s) 691
SlaI CTCGAG 1 cut(s) 986
SmaI CCCGGG 1 cut(s) 337
SmiMI CAYNNNNRTG 6 cut(s) 308, 501, 860, 896, 1216, 1255
SmlI CTYRAG 4 cut(s) 188, 986, 1054, 1098
SmoI CTYRAG 4 cut(s) 188, 986, 1054, 1098
SnaBI TACGTA 1 cut(s) 1185
Sse9I AATT 1 cut(s) 679
SseBI AGGCCT 1 cut(s) 327
SsiI CCGC 5 cut(s) 688, 690, 905, 1024, 1037
SspI AATATT 1 cut(s) 712
SspMI CTAG 2 cut(s) 225, 1276
StuI AGGCCT 1 cut(s) 327
StyD4I CCNGG 4 cut(s) 142, 334, 335, 670
StyI CCWWGG 2 cut(s) 279, 1211
TaaI ACNGT 3 cut(s) 271, 883, 1237
TaiI ACGT 1 cut(s) 1187
TaqI TCGA 5 cut(s) 350, 599, 843, 887, 987
TaqII GACCGA 1 cut(s) 635
TasI AATT 1 cut(s) 679
TatI WGTACW 1 cut(s) 408
TauI GCSGC 1 cut(s) 690
TfiI GAWTC 4 cut(s) 590, 1143, 1175, 1266
Tru1I TTAA 3 cut(s) 570, 909, 1199
Tru9I TTAA 3 cut(s) 570, 909, 1199
TscAI CASTG 3 cut(s) 508, 832, 1240
TseFI GTSAC 1 cut(s) 1237
TseI GCWGC 1 cut(s) 383
Tsp45I GTSAC 1 cut(s) 1237
TspDTI ATGAA 9 cut(s) 196, 224, 326, 380, 475, 846, 908, 1239, 1258
TspMI CCCGGG 1 cut(s) 335
TspRI CASTG 3 cut(s) 508, 832, 1240
Van91I CCANNNNNTGG 3 cut(s) 167, 256, 1002
XceI RCATGY 2 cut(s) 724, 781
XcmI CCANNNNNNNNNTGG 3 cut(s) 779, 898, 1102
XhoI CTCGAG 1 cut(s) 986
XmaI CCCGGG 1 cut(s) 335
XmnI GAANNNNTTC 1 cut(s) 751
XspI CTAG 2 cut(s) 225, 1276
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.