Rh2AG580900

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Forward (+)
81055554 .. 81058686
3133 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG580900.1

Sequence Viewer

Length: 1125 bp
ATGCTCTCTCTCCTTTCTTCTCTCTTCAGAGCATCAATGGCTGTGTTTGTGGTGGTACTACTCTGTGTGCTCTTTGTGCTCTGTTTCTGCTCTGCTTTGCTAAGATGGAATGAGGTGAGGTACAGGAAGAAGGGTCTTCCTCCAGGCACAATGGGCTGGCCAGTCTTTGGAGAAACCACAGAGTTCCTCAAGCAAGGACCAAGCTTCATGAAAAACCAGAGAGCTAGGTATGGTAGTTTTTTCAAATCCCACATACTGGGGTGTCCTACCGTAGTTTCCATGGATCCAGAGGTGAACAGATACATCCTAATGAACGAAGCTAAAGGCCTCGTTCCCGGGTACCCTCAATCGATGTTGGATATCTTAGGCAAGTGTAACATTGCAGCTGTTCATGGCTCCACTCACAAGTACATGAGAGGGGCATTGCTTGCCCTCATTAGCTCAACCATGATCAGAGACCAGATTTTGCCCAAGATTGATGACTTCATGAGAGCCCACCTCAGTGGCTGGGGGAACCAAGTCATCAACATCCAAGAAAAGACCAAAGAGATGGCGCTTCTTTCGTCGCTTAAACAGATTGCAGGCATCGAATCAAGCTCGGGTTCTCAGGCATTCAAGGCCGAGTTCTTCAAGCTTGTGTTGGGAACTCTCTCATTGCCCATTGATCTTCCTGGCACAAATTATCGCCGCGGATTTCAGGCGAGGAAAAATATTGTTAGCATGTTGAAGCAACTAATAGAAGATAGAAGGGCTTCTTCAGAGGAAGTCCACCAAGACATGCTTGGTGGATTGATGAGAAGTGATGATCAGAACAGATACAAACTCACTGATGAAGAAATAATCGATCACATCATCACGATTATGTATTCGGGCTATGAGACTGTTTCGACCACATCAATGATGGCGGTTAAGTACCTTCATGATCATCCACAAGCGCTTGAAGAACTCAGAAAAGAACATTTGGCAATCAGAGCCAGAAAAAGGCCCGAGGATCCCATTGACTGGAATGACCTGAAATCTATGCGGTTTACTCGTGCGGTGATATTTGAGACCTCAAGATTAGCTACTATTGTAAATGGGGTTTTGAGGAAAACCACTCAAGATATGGAACTAAATGGTGAGTAG

Protein Analysis

374

Amino Acids

42.38

Weight (kDa)

9.16

Isoelectric Point (pI)

42.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 47 - 373 3.5e-31 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 339
AccB1I GGYRCC 1 cut(s) 339
AccB7I CCANNNNNTGG 3 cut(s) 167, 256, 1002
AccII CGCG 1 cut(s) 690
AciI CCGC 5 cut(s) 688, 690, 905, 1024, 1037
AclWI GGATC 4 cut(s) 278, 291, 986, 999
AcoI YGGCCR 1 cut(s) 158
AcuI CTGAAG 2 cut(s) 10, 741
AfaI GTAC 5 cut(s) 57, 122, 341, 410, 914
AfeI AGCGCT 1 cut(s) 936
AfiI CCNNNNNNNGG 4 cut(s) 167, 256, 981, 1002
AgsI TTSAA 5 cut(s) 244, 616, 631, 727, 941
AjnI CCWGG 2 cut(s) 142, 670
AleI CACNNNNGTG 1 cut(s) 501
AluBI AGCT 8 cut(s) 204, 224, 320, 386, 441, 597, 634, 1064
AluI AGCT 8 cut(s) 204, 224, 320, 386, 441, 597, 634, 1064
Alw21I GWGCWC 2 cut(s) 72, 81
Alw26I GTCTC 3 cut(s) 450, 872, 1043
AlwI GGATC 4 cut(s) 278, 291, 986, 999
AlwNI CAGNNNCTG 1 cut(s) 507
Ama87I CYCGRG 3 cut(s) 335, 598, 986
Aor51HI AGCGCT 1 cut(s) 936
AoxI GGCC 4 cut(s) 158, 325, 618, 983
ApeKI GCWGC 1 cut(s) 383
Asp700I GAANNNNTTC 1 cut(s) 751
Asp718I GGTACC 1 cut(s) 339
AspLEI GCGC 2 cut(s) 556, 937
AspS9I GGNCC 2 cut(s) 197, 984
AsuC2I CCSGG 2 cut(s) 336, 337
AsuHPI GGTGA 3 cut(s) 127, 304, 1051
AvaI CYCGRG 3 cut(s) 335, 598, 986
AvaII GGWCC 1 cut(s) 197
BalI TGGCCA 1 cut(s) 160
BamHI GGATCC 2 cut(s) 283, 991
BanI GGYRCC 1 cut(s) 339
BanII GRGCYC 1 cut(s) 496
BauI CACGAG 1 cut(s) 1032
BbsI GAAGAC 1 cut(s) 128
Bbv12I GWGCWC 2 cut(s) 72, 81
BbvI GCAGC 1 cut(s) 395
BccI CCATC 3 cut(s) 99, 544, 895
BciT130I CCWGG 2 cut(s) 144, 672
BclI TGATCA 3 cut(s) 450, 805, 922
BcnI CCSGG 2 cut(s) 336, 337
BcoDI GTCTC 3 cut(s) 450, 872, 1043
BfaI CTAG 1 cut(s) 225
BfoI RGCGCY 2 cut(s) 557, 938
BisI GCNGC 2 cut(s) 384, 688
BlsI GCNGC 2 cut(s) 385, 689
Bme1390I CCNGG 4 cut(s) 144, 336, 337, 672
Bme18I GGWCC 1 cut(s) 197
BmeT110I CYCGRG 3 cut(s) 335, 598, 986
BmgT120I GGNCC 2 cut(s) 197, 984
BmiI GGNNCC 5 cut(s) 285, 341, 397, 515, 993
BmrFI CCNGG 4 cut(s) 144, 336, 337, 672
BmrI ACTGGG 1 cut(s) 266
BmsI GCATC 2 cut(s) 41, 594
BmuI ACTGGG 1 cut(s) 266
BpiI GAAGAC 1 cut(s) 128
BplI GAGNNNNNCTC 2 cut(s) 483, 515
BpmI CTGGAG 1 cut(s) 126
BpuEI CTTGAG 3 cut(s) 173, 1039, 1083
BpuMI CCSGG 2 cut(s) 336, 337
Bsa29I ATCGAT 2 cut(s) 350, 843
BsaI GGTCTC 2 cut(s) 450, 1043
BsaJI CCNNGG 4 cut(s) 279, 335, 688, 987
Bsc4I CCNNNNNNNGG 4 cut(s) 167, 256, 981, 1002
Bse1I ACTGG 3 cut(s) 161, 261, 1007
Bse3DI GCAATG 3 cut(s) 378, 422, 653
BseBI CCWGG 2 cut(s) 144, 672
BseCI ATCGAT 2 cut(s) 350, 843
BseDI CCNNGG 4 cut(s) 279, 335, 688, 987
BseGI GGATG 3 cut(s) 303, 528, 925
BseLI CCNNNNNNNGG 4 cut(s) 167, 256, 981, 1002
BseMI GCAATG 3 cut(s) 378, 422, 653
BseMII CTCAG 3 cut(s) 514, 620, 961
BseNI ACTGG 3 cut(s) 161, 261, 1007
BseXI GCAGC 1 cut(s) 395
BseYI CCCAGC 1 cut(s) 507
Bsh1236I CGCG 1 cut(s) 690
BshFI GGCC 4 cut(s) 160, 327, 620, 985
BshNI GGYRCC 1 cut(s) 339
BshVI ATCGAT 2 cut(s) 350, 843
BsiHKAI GWGCWC 2 cut(s) 72, 81
BsiHKCI CYCGRG 3 cut(s) 335, 598, 986
BsiSI CCGG 1 cut(s) 336
BslI CCNNNNNNNGG 4 cut(s) 167, 256, 981, 1002
BsmAI GTCTC 3 cut(s) 450, 872, 1043
BsmI GAATGC 1 cut(s) 611
BsnI GGCC 4 cut(s) 160, 327, 620, 985
Bso31I GGTCTC 2 cut(s) 450, 1043
BsoBI CYCGRG 3 cut(s) 335, 598, 986
Bsp1286I GDGCHC 3 cut(s) 72, 81, 496
Bsp143I GATC 7 cut(s) 283, 450, 664, 805, 844, 922, 991
Bsp19I CCATGG 1 cut(s) 279
BspACI CCGC 5 cut(s) 688, 690, 905, 1024, 1037
BspANI GGCC 4 cut(s) 160, 327, 620, 985
BspCNI CTCAG 3 cut(s) 513, 619, 960
BspDI ATCGAT 2 cut(s) 350, 843
BspFNI CGCG 1 cut(s) 690
BspHI TCATGA 3 cut(s) 207, 486, 919
BspLI GGNNCC 5 cut(s) 285, 341, 397, 515, 993
BspPI GGATC 4 cut(s) 278, 291, 986, 999
BspT107I GGYRCC 1 cut(s) 339
BspTNI GGTCTC 2 cut(s) 450, 1043
BsrDI GCAATG 3 cut(s) 378, 422, 653
BsrI ACTGG 3 cut(s) 161, 261, 1007
BssECI CCNNGG 4 cut(s) 279, 335, 688, 987
BssMI GATC 7 cut(s) 283, 450, 664, 805, 844, 922, 991
BssSI CACGAG 1 cut(s) 1032
BssT1I CCWWGG 1 cut(s) 279
Bst2BI CACGAG 1 cut(s) 1032
Bst2UI CCWGG 2 cut(s) 144, 672
Bst4CI ACNGT 2 cut(s) 271, 883
Bst6I CTCTTC 1 cut(s) 29
BstAPI GCANNNNNTGC 1 cut(s) 428
BstC8I GCNNGC 3 cut(s) 158, 429, 583
BstDEI CTNAG 5 cut(s) 101, 364, 500, 606, 947
BstDSI CCRYGG 2 cut(s) 279, 688
BstF5I GGATG 3 cut(s) 303, 528, 925
BstFNI CGCG 1 cut(s) 690
BstH2I RGCGCY 2 cut(s) 557, 938
BstHHI GCGC 2 cut(s) 556, 937
BstKTI GATC 7 cut(s) 286, 453, 667, 808, 847, 925, 994
BstMAI GTCTC 3 cut(s) 450, 872, 1043
BstMBI GATC 7 cut(s) 283, 450, 664, 805, 844, 922, 991
BstMWI GCNNNNNNNGC 6 cut(s) 38, 76, 153, 428, 617, 971
BstNI CCWGG 2 cut(s) 144, 672
BstNSI RCATGY 2 cut(s) 724, 781
BstSCI CCNGG 4 cut(s) 142, 334, 335, 670
BstUI CGCG 1 cut(s) 690
BstV1I GCAGC 1 cut(s) 395
BstV2I GAAGAC 1 cut(s) 128
BstX2I RGATCY 2 cut(s) 283, 991
BstXI CCANNNNNNTGG 2 cut(s) 503, 550
BstYI RGATCY 2 cut(s) 283, 991
Bsu15I ATCGAT 2 cut(s) 350, 843
BsuRI GGCC 4 cut(s) 160, 327, 620, 985
BsuTUI ATCGAT 2 cut(s) 350, 843
BtgI CCRYGG 2 cut(s) 279, 688
BtsCI GGATG 3 cut(s) 303, 528, 925
BtsIMutI CAGTG 2 cut(s) 508, 825
Cac8I GCNNGC 3 cut(s) 158, 429, 583
CaiI CAGNNNCTG 1 cut(s) 507
CciI TCATGA 3 cut(s) 207, 486, 919
CfoI GCGC 2 cut(s) 556, 937
Cfr13I GGNCC 2 cut(s) 197, 984
Cfr42I CCGCGG 1 cut(s) 691
Cfr9I CCCGGG 1 cut(s) 335
ClaI ATCGAT 2 cut(s) 350, 843
Csp6I GTAC 5 cut(s) 56, 121, 340, 409, 913
CviAII CATG 9 cut(s) 208, 280, 392, 412, 448, 487, 721, 778, 920
CviQI GTAC 5 cut(s) 56, 121, 340, 409, 913
DdeI CTNAG 5 cut(s) 101, 364, 500, 606, 947
DpnI GATC 7 cut(s) 285, 452, 666, 807, 846, 924, 993
DpnII GATC 7 cut(s) 283, 450, 664, 805, 844, 922, 991
EaeI YGGCCR 1 cut(s) 158
Eam1104I CTCTTC 1 cut(s) 29
EarI CTCTTC 1 cut(s) 29
Eco130I CCWWGG 1 cut(s) 279
Eco147I AGGCCT 1 cut(s) 327
Eco24I GRGCYC 1 cut(s) 496
Eco31I GGTCTC 2 cut(s) 450, 1043
Eco32I GATATC 1 cut(s) 361
Eco47I GGWCC 1 cut(s) 197
Eco47III AGCGCT 1 cut(s) 936
Eco57I CTGAAG 2 cut(s) 10, 741
Eco88I CYCGRG 3 cut(s) 335, 598, 986
EcoRII CCWGG 2 cut(s) 142, 670
EcoRV GATATC 1 cut(s) 361
EcoT14I CCWWGG 1 cut(s) 279
EcoT38I GRGCYC 1 cut(s) 496
ErhI CCWWGG 1 cut(s) 279
FaeI CATG 9 cut(s) 211, 283, 395, 415, 451, 490, 724, 781, 923
FalI AAGNNNNNCTT 4 cut(s) 739, 771, 765, 797
FatI CATG 9 cut(s) 207, 279, 391, 411, 447, 486, 720, 777, 919
FbaI TGATCA 3 cut(s) 450, 805, 922
Fnu4HI GCNGC 2 cut(s) 384, 688
FokI GGATG 3 cut(s) 290, 515, 912
FriOI GRGCYC 1 cut(s) 496
Fsp4HI GCNGC 2 cut(s) 384, 688
FspBI CTAG 1 cut(s) 225
GlaI GCGC 2 cut(s) 555, 936
GluI GCNGC 2 cut(s) 384, 688
GsaI CCCAGC 1 cut(s) 511
GsuI CTGGAG 1 cut(s) 126
HaeII RGCGCY 2 cut(s) 557, 938
HaeIII GGCC 4 cut(s) 160, 327, 620, 985
HapII CCGG 1 cut(s) 336
HhaI GCGC 2 cut(s) 556, 937
Hin1II CATG 9 cut(s) 211, 283, 395, 415, 451, 490, 724, 781, 923
Hin6I GCGC 2 cut(s) 554, 935
HinP1I GCGC 2 cut(s) 554, 935
HindIII AAGCTT 2 cut(s) 202, 632
HinfI GANTC 1 cut(s) 590
HpaII CCGG 1 cut(s) 336
HphI GGTGA 3 cut(s) 127, 304, 1051
Hpy166II GTNNAC 3 cut(s) 295, 769, 1029
Hpy188I TCNGA 6 cut(s) 29, 455, 760, 810, 950, 971
Hpy188III TCNNGA 7 cut(s) 208, 287, 487, 856, 920, 1056, 1100
Hpy8I GTNNAC 3 cut(s) 295, 769, 1029
Hpy99I CGWCG 1 cut(s) 568
HpyAV CCTTC 3 cut(s) 124, 741, 926
HpyCH4III ACNGT 2 cut(s) 271, 883
HpyCH4V TGCA 2 cut(s) 383, 581
HpyF10VI GCNNNNNNNGC 6 cut(s) 38, 76, 153, 428, 617, 971
HpyF3I CTNAG 5 cut(s) 101, 364, 500, 606, 947
Hsp92II CATG 9 cut(s) 211, 283, 395, 415, 451, 490, 724, 781, 923
HspAI GCGC 2 cut(s) 554, 935
KpnI GGTACC 1 cut(s) 343
Ksp22I TGATCA 3 cut(s) 450, 805, 922
KspI CCGCGG 1 cut(s) 691
Kzo9I GATC 7 cut(s) 283, 450, 664, 805, 844, 922, 991
LmnI GCTCC 1 cut(s) 401
Lsp1109I GCAGC 1 cut(s) 395
LweI GCATC 2 cut(s) 41, 594
MaeI CTAG 1 cut(s) 225
MaeIII GTNAC 1 cut(s) 374
MalI GATC 7 cut(s) 285, 452, 666, 807, 846, 924, 993
MboI GATC 7 cut(s) 283, 450, 664, 805, 844, 922, 991
MflI RGATCY 2 cut(s) 283, 991
MhlI GDGCHC 3 cut(s) 72, 81, 496
MlsI TGGCCA 1 cut(s) 160
MluCI AATT 1 cut(s) 679
MluNI TGGCCA 1 cut(s) 160
MmeI TCCRAC 1 cut(s) 336
Mox20I TGGCCA 1 cut(s) 160
MroXI GAANNNNTTC 1 cut(s) 751
MscI TGGCCA 1 cut(s) 160
MseI TTAA 2 cut(s) 570, 909
MslI CAYNNNNRTG 4 cut(s) 308, 501, 860, 896
Msp20I TGGCCA 1 cut(s) 160
MspA1I CMGCKG 2 cut(s) 386, 690
MspI CCGG 1 cut(s) 336
MspR9I CCNGG 4 cut(s) 144, 336, 337, 672
Mva1269I GAATGC 1 cut(s) 611
MvaI CCWGG 2 cut(s) 144, 672
MvnI CGCG 1 cut(s) 690
MwoI GCNNNNNNNGC 6 cut(s) 38, 76, 153, 428, 617, 971
NciI CCSGG 2 cut(s) 336, 337
NcoI CCATGG 1 cut(s) 279
NdeII GATC 7 cut(s) 283, 450, 664, 805, 844, 922, 991
NlaIII CATG 9 cut(s) 211, 283, 395, 415, 451, 490, 724, 781, 923
NlaIV GGNNCC 5 cut(s) 285, 341, 397, 515, 993
NmeAIII GCCGAG 1 cut(s) 646
NspI RCATGY 2 cut(s) 724, 781
OliI CACNNNNGTG 1 cut(s) 501
PagI TCATGA 3 cut(s) 207, 486, 919
PceI AGGCCT 1 cut(s) 327
PctI GAATGC 1 cut(s) 611
PdmI GAANNNNTTC 1 cut(s) 751
PfeI GAWTC 1 cut(s) 590
PflMI CCANNNNNTGG 3 cut(s) 167, 256, 1002
PkrI GCNGC 2 cut(s) 385, 689
Psp6I CCWGG 2 cut(s) 142, 670
PspFI CCCAGC 1 cut(s) 507
PspGI CCWGG 2 cut(s) 142, 670
PspN4I GGNNCC 5 cut(s) 285, 341, 397, 515, 993
PspPI GGNCC 2 cut(s) 197, 984
PstNI CAGNNNCTG 1 cut(s) 507
PsuI RGATCY 2 cut(s) 283, 991
PvuII CAGCTG 1 cut(s) 386
RsaI GTAC 5 cut(s) 57, 122, 341, 410, 914
RsaNI GTAC 5 cut(s) 56, 121, 340, 409, 913
RseI CAYNNNNRTG 4 cut(s) 308, 501, 860, 896
SacII CCGCGG 1 cut(s) 691
SaqAI TTAA 2 cut(s) 570, 909
SatI GCNGC 2 cut(s) 384, 688
Sau3AI GATC 7 cut(s) 283, 450, 664, 805, 844, 922, 991
Sau96I GGNCC 2 cut(s) 197, 984
ScrFI CCNGG 4 cut(s) 144, 336, 337, 672
SduI GDGCHC 3 cut(s) 72, 81, 496
SfaNI GCATC 2 cut(s) 41, 594
Sfr303I CCGCGG 1 cut(s) 691
SgrBI CCGCGG 1 cut(s) 691
SinI GGWCC 1 cut(s) 197
SmaI CCCGGG 1 cut(s) 337
SmiMI CAYNNNNRTG 4 cut(s) 308, 501, 860, 896
SmlI CTYRAG 3 cut(s) 188, 1054, 1098
SmoI CTYRAG 3 cut(s) 188, 1054, 1098
Sse9I AATT 1 cut(s) 679
SseBI AGGCCT 1 cut(s) 327
SsiI CCGC 5 cut(s) 688, 690, 905, 1024, 1037
SspI AATATT 1 cut(s) 712
SspMI CTAG 1 cut(s) 225
StuI AGGCCT 1 cut(s) 327
StyD4I CCNGG 4 cut(s) 142, 334, 335, 670
StyI CCWWGG 1 cut(s) 279
TaaI ACNGT 2 cut(s) 271, 883
TaqI TCGA 4 cut(s) 350, 588, 843, 887
TasI AATT 1 cut(s) 679
TatI WGTACW 1 cut(s) 408
TauI GCSGC 1 cut(s) 690
TfiI GAWTC 1 cut(s) 590
Tru1I TTAA 2 cut(s) 570, 909
Tru9I TTAA 2 cut(s) 570, 909
TscAI CASTG 2 cut(s) 508, 832
TseI GCWGC 1 cut(s) 383
TspDTI ATGAA 7 cut(s) 196, 224, 326, 380, 475, 846, 908
TspMI CCCGGG 1 cut(s) 335
TspRI CASTG 2 cut(s) 508, 832
Van91I CCANNNNNTGG 3 cut(s) 167, 256, 1002
VpaK11BI GGWCC 1 cut(s) 197
XceI RCATGY 2 cut(s) 724, 781
XcmI CCANNNNNNNNNTGG 3 cut(s) 779, 898, 1102
XmaI CCCGGG 1 cut(s) 335
XmnI GAANNNNTTC 1 cut(s) 751
XspI CTAG 1 cut(s) 225
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.