FvH4_6g46500

Cytochrome p450

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Forward (+)
35468479 .. 35471481
3003 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g46500.t1

Sequence Viewer

Length: 1437 bp
ATGCTCTCTCTCCTTTCTTCTCTCCTCAGAGCATCAATGGCTGTGTTTGTGGTAGTACTAGTCTGTGTGCTCTTTGTCCTCTGTTTCTGCTCTGCTTTGCTAAGATGGAATGAGGTGAGGTACAGGAAGAAGGGTCTCCCTCCAGGCACAATGGGCTGGCCAGTCTTTGGGGAAACCACAGAGTTCCTCAAGCAAGGCCCTAGCTTCATGAAGAACCAGAGAGCTAGGTATGGTAGTTTTTTCAAATCCCACATACTTGGGTGTCCTACTGTGGTTTCCATGGATCCAGAGGTGAACAGATACATCCTAATGAACGAAGCTAAAGGCCTCGTTCCAGGGTACCCTCAATCGATGTTGGATATTTTGGGCAAGTGTAACATTGCAGCTGTTCATGGTTCCACTCACAAGTACATGAGAGGGGCATTACTTGCCCTCATTAGCCCAACCATGATCAGAGACCAGATTTTACCCAAGATTGATGACTTCATGAGAGCCCACCTCAGTGGTTGGGGGAACCAAGTCATCAACATCCAAGAAAAAACCAAACAGATGGCTCTTCTTTCGTCGCTTAAACAGATTGCAGGCATTGAATCAAGCTCCATTTCCCAGGCATTCAAAACCGAGTTCTTCAAGCTTGTGTTGGGAACTCTCTCATTGCCTATTGATCTTCCTGGCACAAATTATCGCCGTGGATTTCAGGCGAGGAAGAACATTGTTAGCATGTTGAAGCAGCTGATAGAGGATAGAAGAGCTTCTTCAGAGGAAGTCCACCATGACATGCTTGGTGGACTGATGAGAAGTGATGATCAAAACAGATACAAACTCACTGATGAAGAAATAATCGATCACATCATCACGATCATGTATTCGGGCTATGAGACTGTTTCGACGACATCAATGATGGCGGTTAAGTACCTTCATGATCATCCGAAAGCGCTTGAAGAACTCAGAAAAGAACATTTGGCAATCAGAGCCAGAAAAATGCCCGAGGATCCCATTGACTGGAATGACCTGAAATCTATGCGCTTTACTCGTGCGGTGATATTTGAGACCTCAAGATTAGCTACTATTGTAAATGGGGTTTTGAGGAAAACAACTCAGGATATGGAACTAAATGGGTTCTTGATACCAAAAGGATGGAGAATCTATGTTTATACAAGAGAGACTAACTACGATTCGTTTACGTACCCTGATCCATTAACCTTCAATCCATGGAGATGGATGGATAAGTGCACGGAAAATAACTCCTTTATATTTGGGGGAGGCACTAGGCTGTGTCCAGGAAAGGAGTTGGGAATAGCAGAAATTTCCACATTCCTACACTACTTTGTAACTAGATACAGATGGGAAGAAGTTGGGGGAGATAAACTGATGAAGTTTCCAAGAGTAGAGGCACCAAATGGACTGCACATTAGGGTTTCTAATCTGACTAACTAG

Protein Analysis

479

Amino Acids

54.65

Weight (kDa)

9.24

Isoelectric Point (pI)

43.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 47 - 460 3e-52 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 339
AccB1I GGYRCC 2 cut(s) 339, 1393
AccB7I CCANNNNNTGG 2 cut(s) 167, 1002
AciI CCGC 2 cut(s) 905, 1037
AclWI GGATC 5 cut(s) 278, 291, 986, 999, 1187
AcoI YGGCCR 1 cut(s) 158
AcsI RAATTY 1 cut(s) 1305
AcuI CTGAAG 1 cut(s) 741
AfaI GTAC 6 cut(s) 57, 122, 341, 410, 914, 1187
AfeI AGCGCT 1 cut(s) 936
AfiI CCNNNNNNNGG 2 cut(s) 167, 1002
AgsI TTSAA 7 cut(s) 244, 590, 616, 631, 727, 941, 1207
AhlI ACTAGT 1 cut(s) 58
AjnI CCWGG 5 cut(s) 142, 334, 606, 670, 1279
AleI CACNNNNGTG 1 cut(s) 501
AluBI AGCT 9 cut(s) 204, 224, 320, 386, 597, 634, 733, 752, 1064
AluI AGCT 9 cut(s) 204, 224, 320, 386, 597, 634, 733, 752, 1064
Alw21I GWGCWC 2 cut(s) 72, 1235
Alw26I GTCTC 5 cut(s) 140, 450, 872, 1043, 1157
Alw44I GTGCAC 1 cut(s) 1231
AlwI GGATC 5 cut(s) 278, 291, 986, 999, 1187
Ama87I CYCGRG 1 cut(s) 986
Aor51HI AGCGCT 1 cut(s) 936
AoxI GGCC 3 cut(s) 158, 196, 325
ApaLI GTGCAC 1 cut(s) 1231
ApeKI GCWGC 2 cut(s) 383, 730
ApoI RAATTY 1 cut(s) 1305
Asp700I GAANNNNTTC 1 cut(s) 751
Asp718I GGTACC 1 cut(s) 339
AspLEI GCGC 2 cut(s) 937, 1026
AspS9I GGNCC 1 cut(s) 197
AsuHPI GGTGA 3 cut(s) 127, 304, 1051
AvaI CYCGRG 1 cut(s) 986
BaeGI GKGCMC 1 cut(s) 1235
BalI TGGCCA 1 cut(s) 160
BamHI GGATCC 2 cut(s) 283, 991
BanI GGYRCC 2 cut(s) 339, 1393
BanII GRGCYC 1 cut(s) 496
BauI CACGAG 1 cut(s) 1032
Bbv12I GWGCWC 2 cut(s) 72, 1235
BbvI GCAGC 2 cut(s) 395, 742
BccI CCATC 7 cut(s) 99, 544, 895, 1131, 1212, 1216, 1338
BceAI ACGGC 1 cut(s) 672
BciT130I CCWGG 5 cut(s) 144, 336, 608, 672, 1281
BclI TGATCA 3 cut(s) 450, 805, 922
BcoDI GTCTC 5 cut(s) 140, 450, 872, 1043, 1157
BcuI ACTAGT 1 cut(s) 58
BfaI CTAG 6 cut(s) 59, 201, 225, 1269, 1335, 1435
BfoI RGCGCY 1 cut(s) 938
BisI GCNGC 2 cut(s) 384, 731
BlsI GCNGC 2 cut(s) 385, 732
BmcAI AGTACT 1 cut(s) 57
Bme1390I CCNGG 5 cut(s) 144, 336, 608, 672, 1281
BmeT110I CYCGRG 1 cut(s) 986
BmgT120I GGNCC 1 cut(s) 197
BmiI GGNNCC 6 cut(s) 285, 341, 397, 515, 993, 1395
BmrFI CCNGG 5 cut(s) 144, 336, 608, 672, 1281
BmsI GCATC 1 cut(s) 41
BplI GAGNNNNNCTC 2 cut(s) 483, 515
BpmI CTGGAG 1 cut(s) 126
BpuEI CTTGAG 2 cut(s) 173, 1039
Bsa29I ATCGAT 2 cut(s) 350, 843
BsaAI YACGTR 1 cut(s) 1185
BsaI GGTCTC 3 cut(s) 140, 450, 1043
BsaJI CCNNGG 6 cut(s) 279, 335, 606, 688, 987, 1211
Bsc4I CCNNNNNNNGG 2 cut(s) 167, 1002
Bse1I ACTGG 2 cut(s) 161, 1007
Bse3DI GCAATG 2 cut(s) 378, 653
BseBI CCWGG 5 cut(s) 144, 336, 608, 672, 1281
BseCI ATCGAT 2 cut(s) 350, 843
BseDI CCNNGG 6 cut(s) 279, 335, 606, 688, 987, 1211
BseGI GGATG 5 cut(s) 303, 528, 925, 1142, 1227
BseLI CCNNNNNNNGG 2 cut(s) 167, 1002
BseMI GCAATG 2 cut(s) 378, 653
BseMII CTCAG 4 cut(s) 40, 514, 961, 1112
BseNI ACTGG 2 cut(s) 161, 1007
BseRI GAGGAG 1 cut(s) 14
BseSI GKGCMC 1 cut(s) 1235
BseXI GCAGC 2 cut(s) 395, 742
BsgI GTGCAG 1 cut(s) 1391
BshFI GGCC 3 cut(s) 160, 198, 327
BshNI GGYRCC 2 cut(s) 339, 1393
BshVI ATCGAT 2 cut(s) 350, 843
BsiHKAI GWGCWC 2 cut(s) 72, 1235
BsiHKCI CYCGRG 1 cut(s) 986
BslI CCNNNNNNNGG 2 cut(s) 167, 1002
BsmAI GTCTC 5 cut(s) 140, 450, 872, 1043, 1157
BsmI GAATGC 1 cut(s) 611
BsnI GGCC 3 cut(s) 160, 198, 327
Bso31I GGTCTC 3 cut(s) 140, 450, 1043
BsoBI CYCGRG 1 cut(s) 986
Bsp1286I GDGCHC 3 cut(s) 72, 496, 1235
Bsp143I GATC 9 cut(s) 283, 450, 664, 805, 844, 858, 922, 991, 1192
Bsp19I CCATGG 2 cut(s) 279, 1211
BspACI CCGC 2 cut(s) 905, 1037
BspANI GGCC 3 cut(s) 160, 198, 327
BspCNI CTCAG 4 cut(s) 39, 513, 960, 1111
BspDI ATCGAT 2 cut(s) 350, 843
BspHI TCATGA 3 cut(s) 207, 486, 919
BspLI GGNNCC 6 cut(s) 285, 341, 397, 515, 993, 1395
BspPI GGATC 5 cut(s) 278, 291, 986, 999, 1187
BspQI GCTCTTC 2 cut(s) 561, 742
BspT107I GGYRCC 2 cut(s) 339, 1393
BspTNI GGTCTC 3 cut(s) 140, 450, 1043
BsrDI GCAATG 2 cut(s) 378, 653
BsrI ACTGG 2 cut(s) 161, 1007
BssECI CCNNGG 6 cut(s) 279, 335, 606, 688, 987, 1211
BssMI GATC 9 cut(s) 283, 450, 664, 805, 844, 858, 922, 991, 1192
BssSI CACGAG 1 cut(s) 1032
BssT1I CCWWGG 2 cut(s) 279, 1211
Bst2BI CACGAG 1 cut(s) 1032
Bst2UI CCWGG 5 cut(s) 144, 336, 608, 672, 1281
Bst4CI ACNGT 2 cut(s) 271, 883
Bst6I CTCTTC 2 cut(s) 561, 742
BstAPI GCANNNNNTGC 1 cut(s) 428
BstBAI YACGTR 1 cut(s) 1185
BstC8I GCNNGC 2 cut(s) 158, 583
BstDEI CTNAG 5 cut(s) 26, 101, 500, 947, 1098
BstDSI CCRYGG 3 cut(s) 279, 688, 1211
BstF5I GGATG 5 cut(s) 303, 528, 925, 1142, 1227
BstH2I RGCGCY 1 cut(s) 938
BstHHI GCGC 2 cut(s) 937, 1026
BstKTI GATC 9 cut(s) 286, 453, 667, 808, 847, 861, 925, 994, 1195
BstMAI GTCTC 5 cut(s) 140, 450, 872, 1043, 1157
BstMBI GATC 9 cut(s) 283, 450, 664, 805, 844, 858, 922, 991, 1192
BstMWI GCNNNNNNNGC 4 cut(s) 38, 153, 428, 971
BstNI CCWGG 5 cut(s) 144, 336, 608, 672, 1281
BstNSI RCATGY 2 cut(s) 724, 781
BstSCI CCNGG 5 cut(s) 142, 334, 606, 670, 1279
BstSLI GKGCMC 1 cut(s) 1235
BstSNI TACGTA 1 cut(s) 1185
BstV1I GCAGC 2 cut(s) 395, 742
BstX2I RGATCY 2 cut(s) 283, 991
BstXI CCANNNNNNTGG 5 cut(s) 257, 503, 550, 1137, 1218
BstYI RGATCY 2 cut(s) 283, 991
Bsu15I ATCGAT 2 cut(s) 350, 843
BsuRI GGCC 3 cut(s) 160, 198, 327
BsuTUI ATCGAT 2 cut(s) 350, 843
BtgI CCRYGG 3 cut(s) 279, 688, 1211
BtsCI GGATG 5 cut(s) 303, 528, 925, 1142, 1227
BtsIMutI CAGTG 2 cut(s) 508, 825
Cac8I GCNNGC 2 cut(s) 158, 583
CciI TCATGA 3 cut(s) 207, 486, 919
CfoI GCGC 2 cut(s) 937, 1026
Cfr13I GGNCC 1 cut(s) 197
ClaI ATCGAT 2 cut(s) 350, 843
Csp6I GTAC 6 cut(s) 56, 121, 340, 409, 913, 1186
CviQI GTAC 6 cut(s) 56, 121, 340, 409, 913, 1186
DdeI CTNAG 5 cut(s) 26, 101, 500, 947, 1098
DpnI GATC 9 cut(s) 285, 452, 666, 807, 846, 860, 924, 993, 1194
DpnII GATC 9 cut(s) 283, 450, 664, 805, 844, 858, 922, 991, 1192
EaeI YGGCCR 1 cut(s) 158
Eam1104I CTCTTC 2 cut(s) 561, 742
EarI CTCTTC 2 cut(s) 561, 742
Eco105I TACGTA 1 cut(s) 1185
Eco130I CCWWGG 2 cut(s) 279, 1211
Eco147I AGGCCT 1 cut(s) 327
Eco24I GRGCYC 1 cut(s) 496
Eco31I GGTCTC 3 cut(s) 140, 450, 1043
Eco47III AGCGCT 1 cut(s) 936
Eco57I CTGAAG 1 cut(s) 741
Eco88I CYCGRG 1 cut(s) 986
EcoO109I RGGNCCY 1 cut(s) 197
EcoRII CCWGG 5 cut(s) 142, 334, 606, 670, 1279
EcoT14I CCWWGG 2 cut(s) 279, 1211
EcoT38I GRGCYC 1 cut(s) 496
ErhI CCWWGG 2 cut(s) 279, 1211
FalI AAGNNNNNCTT 2 cut(s) 739, 771
FbaI TGATCA 3 cut(s) 450, 805, 922
Fnu4HI GCNGC 2 cut(s) 384, 731
FokI GGATG 5 cut(s) 290, 515, 912, 1149, 1234
FriOI GRGCYC 1 cut(s) 496
Fsp4HI GCNGC 2 cut(s) 384, 731
FspBI CTAG 6 cut(s) 59, 201, 225, 1269, 1335, 1435
GlaI GCGC 2 cut(s) 936, 1025
GluI GCNGC 2 cut(s) 384, 731
GsuI CTGGAG 1 cut(s) 126
HaeII RGCGCY 1 cut(s) 938
HaeIII GGCC 3 cut(s) 160, 198, 327
HhaI GCGC 2 cut(s) 937, 1026
Hin6I GCGC 2 cut(s) 935, 1024
HinP1I GCGC 2 cut(s) 935, 1024
HindIII AAGCTT 1 cut(s) 632
HinfI GANTC 3 cut(s) 590, 1143, 1175
HphI GGTGA 3 cut(s) 127, 304, 1051
Hpy166II GTNNAC 5 cut(s) 295, 769, 788, 1182, 1233
Hpy188I TCNGA 7 cut(s) 29, 455, 760, 930, 950, 971, 1428
Hpy188III TCNNGA 8 cut(s) 208, 287, 487, 856, 920, 1056, 1100, 1123
Hpy8I GTNNAC 5 cut(s) 295, 769, 788, 1182, 1233
Hpy99I CGWCG 2 cut(s) 568, 892
HpyAV CCTTC 3 cut(s) 124, 926, 1213
HpyCH4III ACNGT 2 cut(s) 271, 883
HpyCH4IV ACGT 1 cut(s) 1184
HpyCH4V TGCA 4 cut(s) 383, 581, 1233, 1408
HpyF10VI GCNNNNNNNGC 4 cut(s) 38, 153, 428, 971
HpyF3I CTNAG 5 cut(s) 26, 101, 500, 947, 1098
HpySE526I ACGT 1 cut(s) 1184
HspAI GCGC 2 cut(s) 935, 1024
KpnI GGTACC 1 cut(s) 343
Ksp22I TGATCA 3 cut(s) 450, 805, 922
Kzo9I GATC 9 cut(s) 283, 450, 664, 805, 844, 858, 922, 991, 1192
LguI GCTCTTC 2 cut(s) 561, 742
LmnI GCTCC 1 cut(s) 602
Lsp1109I GCAGC 2 cut(s) 395, 742
LweI GCATC 1 cut(s) 41
MaeI CTAG 6 cut(s) 59, 201, 225, 1269, 1335, 1435
MaeII ACGT 1 cut(s) 1184
MaeIII GTNAC 2 cut(s) 374, 1330
MalI GATC 9 cut(s) 285, 452, 666, 807, 846, 860, 924, 993, 1194
MboI GATC 9 cut(s) 283, 450, 664, 805, 844, 858, 922, 991, 1192
MflI RGATCY 2 cut(s) 283, 991
MhlI GDGCHC 3 cut(s) 72, 496, 1235
MlsI TGGCCA 1 cut(s) 160
MluCI AATT 2 cut(s) 679, 1305
MluNI TGGCCA 1 cut(s) 160
MmeI TCCRAC 1 cut(s) 336
Mox20I TGGCCA 1 cut(s) 160
MroXI GAANNNNTTC 1 cut(s) 751
MscI TGGCCA 1 cut(s) 160
MseI TTAA 3 cut(s) 570, 909, 1199
MslI CAYNNNNRTG 4 cut(s) 308, 501, 860, 1216
Msp20I TGGCCA 1 cut(s) 160
MspA1I CMGCKG 2 cut(s) 386, 733
MspR9I CCNGG 5 cut(s) 144, 336, 608, 672, 1281
Mva1269I GAATGC 1 cut(s) 611
MvaI CCWGG 5 cut(s) 144, 336, 608, 672, 1281
MwoI GCNNNNNNNGC 4 cut(s) 38, 153, 428, 971
NcoI CCATGG 2 cut(s) 279, 1211
NdeII GATC 9 cut(s) 283, 450, 664, 805, 844, 858, 922, 991, 1192
NlaIV GGNNCC 6 cut(s) 285, 341, 397, 515, 993, 1395
NspI RCATGY 2 cut(s) 724, 781
OliI CACNNNNGTG 1 cut(s) 501
PagI TCATGA 3 cut(s) 207, 486, 919
PceI AGGCCT 1 cut(s) 327
PciSI GCTCTTC 2 cut(s) 561, 742
PctI GAATGC 1 cut(s) 611
PdmI GAANNNNTTC 1 cut(s) 751
PfeI GAWTC 3 cut(s) 590, 1143, 1175
PflMI CCANNNNNTGG 2 cut(s) 167, 1002
PfoI TCCNGGA 1 cut(s) 1279
PkrI GCNGC 2 cut(s) 385, 732
Ppu21I YACGTR 1 cut(s) 1185
Psp6I CCWGG 5 cut(s) 142, 334, 606, 670, 1279
PspGI CCWGG 5 cut(s) 142, 334, 606, 670, 1279
PspN4I GGNNCC 6 cut(s) 285, 341, 397, 515, 993, 1395
PspPI GGNCC 1 cut(s) 197
PsuI RGATCY 2 cut(s) 283, 991
PvuII CAGCTG 2 cut(s) 386, 733
RsaI GTAC 6 cut(s) 57, 122, 341, 410, 914, 1187
RsaNI GTAC 6 cut(s) 56, 121, 340, 409, 913, 1186
RseI CAYNNNNRTG 4 cut(s) 308, 501, 860, 1216
SapI GCTCTTC 2 cut(s) 561, 742
SaqAI TTAA 3 cut(s) 570, 909, 1199
SatI GCNGC 2 cut(s) 384, 731
Sau3AI GATC 9 cut(s) 283, 450, 664, 805, 844, 858, 922, 991, 1192
Sau96I GGNCC 1 cut(s) 197
ScaI AGTACT 1 cut(s) 57
ScrFI CCNGG 5 cut(s) 144, 336, 608, 672, 1281
SduI GDGCHC 3 cut(s) 72, 496, 1235
SfaNI GCATC 1 cut(s) 41
SmiMI CAYNNNNRTG 4 cut(s) 308, 501, 860, 1216
SmlI CTYRAG 2 cut(s) 188, 1054
SmoI CTYRAG 2 cut(s) 188, 1054
SnaBI TACGTA 1 cut(s) 1185
SpeI ACTAGT 1 cut(s) 58
Sse9I AATT 2 cut(s) 679, 1305
SseBI AGGCCT 1 cut(s) 327
SsiI CCGC 2 cut(s) 905, 1037
SspMI CTAG 6 cut(s) 59, 201, 225, 1269, 1335, 1435
StuI AGGCCT 1 cut(s) 327
StyD4I CCNGG 5 cut(s) 142, 334, 606, 670, 1279
StyI CCWWGG 2 cut(s) 279, 1211
TaaI ACNGT 2 cut(s) 271, 883
TaiI ACGT 1 cut(s) 1187
TaqI TCGA 3 cut(s) 350, 843, 887
TasI AATT 2 cut(s) 679, 1305
TatI WGTACW 2 cut(s) 55, 408
TfiI GAWTC 3 cut(s) 590, 1143, 1175
Tru1I TTAA 3 cut(s) 570, 909, 1199
Tru9I TTAA 3 cut(s) 570, 909, 1199
TscAI CASTG 2 cut(s) 508, 832
TseI GCWGC 2 cut(s) 383, 730
TspDTI ATGAA 8 cut(s) 196, 224, 326, 380, 475, 846, 908, 1388
TspGWI ACGGA 1 cut(s) 1250
TspRI CASTG 2 cut(s) 508, 832
Van91I CCANNNNNTGG 2 cut(s) 167, 1002
VneI GTGCAC 1 cut(s) 1231
XapI RAATTY 1 cut(s) 1305
XceI RCATGY 2 cut(s) 724, 781
XcmI CCANNNNNNNNNTGG 1 cut(s) 779
XmnI GAANNNNTTC 1 cut(s) 751
XspI CTAG 6 cut(s) 59, 201, 225, 1269, 1335, 1435
ZrmI AGTACT 1 cut(s) 57
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.