AT3G30725

glutamine dumper 6

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Forward (+)
12352472 .. 12353033
562 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G30725.1

Sequence Viewer

Length: 336 bp
ATGAGGCCGACACCAAAAGTAGAAATCTGGAAGTCACCAGTACCATATCTCTTTGGTGGTCTCTTTTTGCTTGTTTTGCTTATAGCTTTGGCATTACTCTCATTGGTCTGCACACACCAAAAACCTTCTTCCTCTAGCAATAACAATCATATGGATGAAGAAGACGATGTCGGTGACAAGGACGCTAAGCCTATTACAAGAGAGTACTTACCTAAGATCGTGGTGATTTTGGCCGGAGACAATAAACCTACTTGCTTGGCTGTTCCGGTCGTGGTTCCTCCACCCACTTCCATTTTTCGTTGTAACTGTGACAATGTTACTGTCATCTCAACCTAA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

111

Amino Acids

12.13

Weight (kDa)

6.04

Isoelectric Point (pI)

46.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 1 cut(s) 231
AfaI GTAC 2 cut(s) 42, 206
AluBI AGCT 1 cut(s) 86
AluI AGCT 1 cut(s) 86
Alw26I GTCTC 2 cut(s) 65, 231
AoxI GGCC 2 cut(s) 5, 231
AsuHPI GGTGA 3 cut(s) 27, 185, 235
BbsI GAAGAC 1 cut(s) 168
BcoDI GTCTC 2 cut(s) 65, 231
BfaI CTAG 1 cut(s) 135
BlpI GCTNAGC 1 cut(s) 186
BmcAI AGTACT 1 cut(s) 206
BmiI GGNNCC 1 cut(s) 276
BpiI GAAGAC 1 cut(s) 168
Bpu1102I GCTNAGC 1 cut(s) 186
BsaI GGTCTC 1 cut(s) 65
BsaWI WCCGGW 1 cut(s) 265
Bse1I ACTGG 1 cut(s) 38
BseGI GGATG 1 cut(s) 160
BseNI ACTGG 1 cut(s) 38
BsgI GTGCAG 1 cut(s) 94
Bsh1285I CGRYCG 1 cut(s) 270
BshFI GGCC 2 cut(s) 7, 233
BsiEI CGRYCG 1 cut(s) 270
BsiSI CCGG 2 cut(s) 234, 266
BsmAI GTCTC 2 cut(s) 65, 231
BsnI GGCC 2 cut(s) 7, 233
Bso31I GGTCTC 1 cut(s) 65
Bsp143I GATC 1 cut(s) 216
Bsp1720I GCTNAGC 1 cut(s) 186
BspANI GGCC 2 cut(s) 7, 233
BspLI GGNNCC 1 cut(s) 276
BspTNI GGTCTC 1 cut(s) 65
BsrI ACTGG 1 cut(s) 38
BssMI GATC 1 cut(s) 216
Bst4CI ACNGT 2 cut(s) 308, 322
BstDEI CTNAG 2 cut(s) 186, 213
BstF5I GGATG 1 cut(s) 160
BstKTI GATC 1 cut(s) 219
BstMAI GTCTC 2 cut(s) 65, 231
BstMBI GATC 1 cut(s) 216
BstMCI CGRYCG 1 cut(s) 270
BstMWI GCNNNNNNNGC 1 cut(s) 76
BstV2I GAAGAC 1 cut(s) 168
BsuRI GGCC 2 cut(s) 7, 233
BtsCI GGATG 1 cut(s) 160
CseI GACGC 1 cut(s) 191
Csp6I GTAC 2 cut(s) 41, 205
CviJI RGCY 5 cut(s) 7, 86, 190, 233, 260
CviKI_1 RGCY 5 cut(s) 7, 86, 190, 233, 260
CviQI GTAC 2 cut(s) 41, 205
DdeI CTNAG 2 cut(s) 186, 213
DpnI GATC 1 cut(s) 218
DpnII GATC 1 cut(s) 216
EaeI YGGCCR 1 cut(s) 231
Eco31I GGTCTC 1 cut(s) 65
FaiI YATR 4 cut(s) 46, 83, 150, 152
FauNDI CATATG 1 cut(s) 150
FokI GGATG 1 cut(s) 167
FspBI CTAG 1 cut(s) 135
HaeIII GGCC 2 cut(s) 7, 233
HapII CCGG 2 cut(s) 234, 266
HgaI GACGC 1 cut(s) 191
HpaII CCGG 2 cut(s) 234, 266
HphI GGTGA 3 cut(s) 27, 185, 235
Hpy188III TCNNGA 1 cut(s) 28
HpyAV CCTTC 1 cut(s) 135
HpyCH4III ACNGT 2 cut(s) 308, 322
HpyCH4V TGCA 1 cut(s) 111
HpyF10VI GCNNNNNNNGC 1 cut(s) 76
HpyF3I CTNAG 2 cut(s) 186, 213
Kzo9I GATC 1 cut(s) 216
LpnPI CCDG 4 cut(s) 13, 51, 247, 279
MaeI CTAG 1 cut(s) 135
MaeIII GTNAC 5 cut(s) 33, 173, 302, 308, 316
MalI GATC 1 cut(s) 218
MboI GATC 1 cut(s) 216
MboII GAAGA 3 cut(s) 120, 170, 173
MnlI CCTC 2 cut(s) 142, 288
MslI CAYNNNNRTG 1 cut(s) 153
MspI CCGG 2 cut(s) 234, 266
MwoI GCNNNNNNNGC 1 cut(s) 76
NdeI CATATG 1 cut(s) 150
NdeII GATC 1 cut(s) 216
NlaIV GGNNCC 1 cut(s) 276
NmuCI GTSAC 3 cut(s) 33, 173, 308
PflFI GACNNNGTC 1 cut(s) 167
PspN4I GGNNCC 1 cut(s) 276
PsyI GACNNNGTC 1 cut(s) 167
RsaI GTAC 2 cut(s) 42, 206
RsaNI GTAC 2 cut(s) 41, 205
RseI CAYNNNNRTG 1 cut(s) 153
Sau3AI GATC 1 cut(s) 216
ScaI AGTACT 1 cut(s) 206
SetI ASST 5 cut(s) 88, 127, 214, 250, 335
SmiMI CAYNNNNRTG 1 cut(s) 153
SspMI CTAG 1 cut(s) 135
TaaI ACNGT 2 cut(s) 308, 322
TatI WGTACW 1 cut(s) 204
TseFI GTSAC 3 cut(s) 33, 173, 308
Tsp45I GTSAC 3 cut(s) 33, 173, 308
TspDTI ATGAA 1 cut(s) 171
Tth111I GACNNNGTC 1 cut(s) 167
XspI CTAG 1 cut(s) 135
ZrmI AGTACT 1 cut(s) 206
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.