pycom09g00560

Protein GLUTAMINE DUMPER

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
Physical Location & Seq
Reverse (-)
435475 .. 436026
552 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom09g00560.2

Sequence Viewer

Length: 486 bp
ATGTACACCAAGTCACTTTTGGCATCTGAGAAAGCACAAGGAATAATCTTCCTTCCTCTTACCAAGGGCCACATAAGGTGCTGCCACACCACCCTCGTTTCTCCACCCAAAACAAAAAAAAACCTATTAGAGAATAACAAGAGAGAGATGAGTCCTGCAACCACAAGCGCCATATCAGCAACCACCAAAGTCCACAACCTATGGAGGTCTCCGCTGCCGTACCTCTTCGGCAGCTTAGGTTTGATGCTGCTACTCATTTCTGTTGCATTGGTCATCCTCGCGTGTTCATACCGCAAACCCTCTTCTAGTGAAGATGATGAAGAGAAGCCAGCACAGCCCATGAGCACAGTTCTTGACGACGAGAGAAGGATTGCAATCGTCATAATGGCCGGGGATGACATGCCGACGCATTTAGCTACAGAGGTGATCACTCCAACAACTCACCACTGTACTTGCTCCTCTGAGACCGATCGATCATCAACATAA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

162

Amino Acids

17.67

Weight (kDa)

7.69

Isoelectric Point (pI)

69.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 281
AciI CCGC 2 cut(s) 212, 292
AcoI YGGCCR 1 cut(s) 387
AfaI GTAC 3 cut(s) 5, 221, 451
AluBI AGCT 2 cut(s) 234, 416
AluI AGCT 2 cut(s) 234, 416
Alw21I GWGCWC 1 cut(s) 347
Alw26I GTCTC 2 cut(s) 213, 458
AoxI GGCC 2 cut(s) 67, 387
ApeKI GCWGC 4 cut(s) 81, 214, 231, 247
AspLEI GCGC 1 cut(s) 170
AspS9I GGNCC 1 cut(s) 67
AsuC2I CCSGG 1 cut(s) 391
AsuHPI GGTGA 2 cut(s) 434, 436
Bbv12I GWGCWC 1 cut(s) 347
BbvI GCAGC 4 cut(s) 68, 201, 234, 243
BceAI ACGGC 1 cut(s) 202
BclI TGATCA 1 cut(s) 426
BcnI CCSGG 1 cut(s) 391
BcoDI GTCTC 2 cut(s) 213, 458
BfaI CTAG 1 cut(s) 306
BfmI CTRYAG 1 cut(s) 417
BfoI RGCGCY 1 cut(s) 171
BisI GCNGC 4 cut(s) 82, 215, 232, 248
BlsI GCNGC 4 cut(s) 83, 216, 233, 249
Bme1390I CCNGG 1 cut(s) 391
BmgT120I GGNCC 1 cut(s) 67
BmrFI CCNGG 1 cut(s) 391
BmsI GCATC 2 cut(s) 32, 234
Bpu10I CCTNAGC 1 cut(s) 235
BpuMI CCSGG 1 cut(s) 391
Bsa29I ATCGAT 1 cut(s) 472
BsaBI GATNNNNATC 1 cut(s) 374
BsaI GGTCTC 2 cut(s) 213, 458
BsaJI CCNNGG 2 cut(s) 63, 390
Bse8I GATNNNNATC 1 cut(s) 374
BseCI ATCGAT 1 cut(s) 472
BseDI CCNNGG 2 cut(s) 63, 390
BseGI GGATG 2 cut(s) 273, 400
BseJI GATNNNNATC 1 cut(s) 374
BseMII CTCAG 2 cut(s) 18, 453
BseRI GAGGAG 1 cut(s) 448
BseXI GCAGC 4 cut(s) 68, 201, 234, 243
Bsh1236I CGCG 1 cut(s) 281
Bsh1285I CGRYCG 1 cut(s) 472
BshFI GGCC 2 cut(s) 69, 389
BshVI ATCGAT 1 cut(s) 472
BsiEI CGRYCG 1 cut(s) 472
BsiHKAI GWGCWC 1 cut(s) 347
BsiSI CCGG 1 cut(s) 390
BsmAI GTCTC 2 cut(s) 213, 458
BsnI GGCC 2 cut(s) 69, 389
Bso31I GGTCTC 2 cut(s) 213, 458
Bsp1286I GDGCHC 1 cut(s) 347
Bsp1407I TGTACA 1 cut(s) 3
Bsp143I GATC 3 cut(s) 426, 469, 473
BspACI CCGC 2 cut(s) 212, 292
BspANI GGCC 2 cut(s) 69, 389
BspCNI CTCAG 2 cut(s) 19, 454
BspDI ATCGAT 1 cut(s) 472
BspFNI CGCG 1 cut(s) 281
BspTNI GGTCTC 2 cut(s) 213, 458
BsrGI TGTACA 1 cut(s) 3
BssECI CCNNGG 2 cut(s) 63, 390
BssMI GATC 3 cut(s) 426, 469, 473
BssT1I CCWWGG 1 cut(s) 63
Bst4CI ACNGT 2 cut(s) 349, 449
Bst6I CTCTTC 3 cut(s) 230, 307, 315
BstAUI TGTACA 1 cut(s) 3
BstC8I GCNNGC 1 cut(s) 330
BstDEI CTNAG 3 cut(s) 27, 235, 462
BstF5I GGATG 2 cut(s) 273, 400
BstFNI CGCG 1 cut(s) 281
BstH2I RGCGCY 1 cut(s) 171
BstHHI GCGC 1 cut(s) 170
BstKTI GATC 3 cut(s) 429, 472, 476
BstMAI GTCTC 2 cut(s) 213, 458
BstMBI GATC 3 cut(s) 426, 469, 473
BstMCI CGRYCG 1 cut(s) 472
BstMWI GCNNNNNNNGC 2 cut(s) 176, 334
BstNSI RCATGY 1 cut(s) 403
BstSCI CCNGG 1 cut(s) 389
BstSFI CTRYAG 1 cut(s) 417
BstUI CGCG 1 cut(s) 281
BstV1I GCAGC 4 cut(s) 68, 201, 234, 243
Bsu15I ATCGAT 1 cut(s) 472
BsuRI GGCC 2 cut(s) 69, 389
BsuTUI ATCGAT 1 cut(s) 472
BtsCI GGATG 2 cut(s) 273, 400
BtsIMutI CAGTG 1 cut(s) 445
Cac8I GCNNGC 1 cut(s) 330
CfoI GCGC 1 cut(s) 170
Cfr13I GGNCC 1 cut(s) 67
ClaI ATCGAT 1 cut(s) 472
CseI GACGC 1 cut(s) 415
Csp6I GTAC 3 cut(s) 4, 220, 450
CspCI CAANNNNNGTGG 2 cut(s) 434, 469
CviAII CATG 2 cut(s) 340, 400
CviJI RGCY 6 cut(s) 69, 234, 328, 337, 389, 416
CviKI_1 RGCY 6 cut(s) 69, 234, 328, 337, 389, 416
CviQI GTAC 3 cut(s) 4, 220, 450
DdeI CTNAG 3 cut(s) 27, 235, 462
DpnI GATC 3 cut(s) 428, 471, 475
DpnII GATC 3 cut(s) 426, 469, 473
EaeI YGGCCR 1 cut(s) 387
Eam1104I CTCTTC 3 cut(s) 230, 307, 315
EarI CTCTTC 3 cut(s) 230, 307, 315
Eco130I CCWWGG 1 cut(s) 63
Eco31I GGTCTC 2 cut(s) 213, 458
EcoT14I CCWWGG 1 cut(s) 63
ErhI CCWWGG 1 cut(s) 63
FaeI CATG 2 cut(s) 343, 403
FaiI YATR 8 cut(s) 74, 173, 202, 289, 341, 383, 401, 484
FatI CATG 2 cut(s) 339, 399
FbaI TGATCA 1 cut(s) 426
Fnu4HI GCNGC 4 cut(s) 82, 215, 232, 248
FokI GGATG 2 cut(s) 260, 407
Fsp4HI GCNGC 4 cut(s) 82, 215, 232, 248
FspBI CTAG 1 cut(s) 306
GlaI GCGC 1 cut(s) 169
GluI GCNGC 4 cut(s) 82, 215, 232, 248
HaeII RGCGCY 1 cut(s) 171
HaeIII GGCC 2 cut(s) 69, 389
HapII CCGG 1 cut(s) 390
HgaI GACGC 1 cut(s) 415
HhaI GCGC 1 cut(s) 170
Hin1II CATG 2 cut(s) 343, 403
Hin6I GCGC 1 cut(s) 168
HinP1I GCGC 1 cut(s) 168
HinfI GANTC 1 cut(s) 151
HpaII CCGG 1 cut(s) 390
HphI GGTGA 2 cut(s) 434, 436
Hpy166II GTNNAC 2 cut(s) 6, 193
Hpy188I TCNGA 2 cut(s) 28, 463
Hpy188III TCNNGA 1 cut(s) 353
Hpy8I GTNNAC 2 cut(s) 6, 193
Hpy99I CGWCG 2 cut(s) 362, 409
HpyAV CCTTC 2 cut(s) 62, 360
HpyCH4III ACNGT 2 cut(s) 349, 449
HpyCH4V TGCA 3 cut(s) 158, 266, 374
HpyF10VI GCNNNNNNNGC 2 cut(s) 176, 334
HpyF3I CTNAG 3 cut(s) 27, 235, 462
Hsp92II CATG 2 cut(s) 343, 403
HspAI GCGC 1 cut(s) 168
Ksp22I TGATCA 1 cut(s) 426
Kzo9I GATC 3 cut(s) 426, 469, 473
LmnI GCTCC 1 cut(s) 461
LpnPI CCDG 3 cut(s) 168, 342, 403
Lsp1109I GCAGC 4 cut(s) 68, 201, 234, 243
LweI GCATC 2 cut(s) 32, 234
MaeI CTAG 1 cut(s) 306
MaeIII GTNAC 1 cut(s) 12
MalI GATC 3 cut(s) 428, 471, 475
MboI GATC 3 cut(s) 426, 469, 473
MboII GAAGA 5 cut(s) 40, 217, 294, 323, 332
MhlI GDGCHC 1 cut(s) 347
MlyI GAGTC 1 cut(s) 160
MmeI TCCRAC 1 cut(s) 458
MnlI CCTC 8 cut(s) 66, 104, 198, 233, 287, 310, 415, 469
MspA1I CMGCKG 1 cut(s) 214
MspI CCGG 1 cut(s) 390
MspR9I CCNGG 1 cut(s) 391
MvnI CGCG 1 cut(s) 281
MwoI GCNNNNNNNGC 2 cut(s) 176, 334
NciI CCSGG 1 cut(s) 391
NdeII GATC 3 cut(s) 426, 469, 473
NlaIII CATG 2 cut(s) 343, 403
NmuCI GTSAC 1 cut(s) 12
NspI RCATGY 1 cut(s) 403
PkrI GCNGC 4 cut(s) 83, 216, 233, 249
Ple19I CGATCG 1 cut(s) 472
PleI GAGTC 1 cut(s) 159
PpsI GAGTC 1 cut(s) 159
PspPI GGNCC 1 cut(s) 67
PvuI CGATCG 1 cut(s) 472
RsaI GTAC 3 cut(s) 5, 221, 451
RsaNI GTAC 3 cut(s) 4, 220, 450
SatI GCNGC 4 cut(s) 82, 215, 232, 248
Sau3AI GATC 3 cut(s) 426, 469, 473
Sau96I GGNCC 1 cut(s) 67
SchI GAGTC 1 cut(s) 160
ScrFI CCNGG 1 cut(s) 391
SduI GDGCHC 1 cut(s) 347
SetI ASST 9 cut(s) 80, 126, 201, 209, 225, 236, 241, 418, 426
SfaNI GCATC 2 cut(s) 32, 234
SfcI CTRYAG 1 cut(s) 417
SsiI CCGC 2 cut(s) 212, 292
SspMI CTAG 1 cut(s) 306
StyD4I CCNGG 1 cut(s) 389
StyI CCWWGG 1 cut(s) 63
TaaI ACNGT 2 cut(s) 349, 449
TaqI TCGA 1 cut(s) 472
TaqII GACCGA 1 cut(s) 482
TatI WGTACW 2 cut(s) 3, 449
TscAI CASTG 1 cut(s) 452
TseFI GTSAC 1 cut(s) 12
TseI GCWGC 4 cut(s) 81, 214, 231, 247
Tsp45I GTSAC 1 cut(s) 12
TspDTI ATGAA 2 cut(s) 276, 333
TspRI CASTG 1 cut(s) 452
XceI RCATGY 1 cut(s) 403
XcmI CCANNNNNNNNNTGG 1 cut(s) 16
XspI CTAG 1 cut(s) 306
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.