FvH4_6g45940

Protein GLUTAMINE DUMPER

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Forward (+)
35141734 .. 35142956
1223 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g45940.t1

Sequence Viewer

Length: 366 bp
ATGAGGCCTGCAAGTACAAGCAGTACTACATCCTCACCCGCCAGATCAGTACTACTCCATCCATGGAAGTCTCCGGTTCCTTACCTCTTCGGCGGCTTAGCCTTCATGTTACTGCTCGTTTTCGTCGCACTGATCATTCTTCTATGGTCATACCACCATTCGCGCTCCTCCAACTCATCAAGTGAAGAAGATGATCATCATGAAGAGAAGCCAACGAAAGCGATGAACACTACAGAGTCTGATGCTGATCAACCAAAGATTATTGTCATAATAAACGCCGGAGAAGACAAGCCCTCACAGTTAGCTACACCAGTCGCTTCCACTTGCTCTTGCTCTTGCTCTTCTGATCAAAATGACCATGCTTGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

122

Amino Acids

13.13

Weight (kDa)

5.55

Isoelectric Point (pI)

67.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 163
AciI CCGC 2 cut(s) 39, 93
AfaI GTAC 3 cut(s) 16, 25, 51
AluBI AGCT 1 cut(s) 305
AluI AGCT 1 cut(s) 305
Alw26I GTCTC 1 cut(s) 75
AlwNI CAGNNNCTG 1 cut(s) 239
AoxI GGCC 1 cut(s) 5
AspLEI GCGC 1 cut(s) 165
AsuHPI GGTGA 1 cut(s) 27
BbsI GAAGAC 1 cut(s) 291
BccI CCATC 1 cut(s) 66
BclI TGATCA 4 cut(s) 132, 193, 247, 346
BcoDI GTCTC 1 cut(s) 75
BfmI CTRYAG 1 cut(s) 231
BisI GCNGC 1 cut(s) 94
BlpI GCTNAGC 1 cut(s) 97
BlsI GCNGC 1 cut(s) 95
BmcAI AGTACT 2 cut(s) 25, 51
BmiI GGNNCC 1 cut(s) 78
BmsI GCATC 1 cut(s) 232
BpiI GAAGAC 1 cut(s) 291
Bpu1102I GCTNAGC 1 cut(s) 97
BsaBI GATNNNNATC 2 cut(s) 195, 246
BsaJI CCNNGG 1 cut(s) 62
BsaWI WCCGGW 1 cut(s) 73
Bse1I ACTGG 1 cut(s) 311
Bse8I GATNNNNATC 2 cut(s) 195, 246
BseDI CCNNGG 1 cut(s) 62
BseGI GGATG 2 cut(s) 29, 58
BseJI GATNNNNATC 2 cut(s) 195, 246
BseNI ACTGG 1 cut(s) 311
BseRI GAGGAG 1 cut(s) 157
Bsh1236I CGCG 1 cut(s) 163
BshFI GGCC 1 cut(s) 7
BsiSI CCGG 2 cut(s) 74, 279
BsmAI GTCTC 1 cut(s) 75
BsnI GGCC 1 cut(s) 7
Bsp143I GATC 5 cut(s) 44, 132, 193, 247, 346
Bsp1720I GCTNAGC 1 cut(s) 97
Bsp19I CCATGG 1 cut(s) 62
BspACI CCGC 2 cut(s) 39, 93
BspANI GGCC 1 cut(s) 7
BspFNI CGCG 1 cut(s) 163
BspHI TCATGA 1 cut(s) 199
BspLI GGNNCC 1 cut(s) 78
BspQI GCTCTTC 1 cut(s) 346
BsrI ACTGG 1 cut(s) 311
BssECI CCNNGG 1 cut(s) 62
BssMI GATC 5 cut(s) 44, 132, 193, 247, 346
BssT1I CCWWGG 1 cut(s) 62
Bst4CI ACNGT 1 cut(s) 300
Bst6I CTCTTC 3 cut(s) 92, 198, 346
BstC8I GCNNGC 1 cut(s) 9
BstDEI CTNAG 1 cut(s) 97
BstDSI CCRYGG 1 cut(s) 62
BstF5I GGATG 2 cut(s) 29, 58
BstFNI CGCG 1 cut(s) 163
BstHHI GCGC 1 cut(s) 165
BstKTI GATC 5 cut(s) 47, 135, 196, 250, 349
BstMAI GTCTC 1 cut(s) 75
BstMBI GATC 5 cut(s) 44, 132, 193, 247, 346
BstSFI CTRYAG 1 cut(s) 231
BstUI CGCG 1 cut(s) 163
BstV2I GAAGAC 1 cut(s) 291
BsuRI GGCC 1 cut(s) 7
BtgI CCRYGG 1 cut(s) 62
BtgZI GCGATG 1 cut(s) 236
BtsCI GGATG 2 cut(s) 29, 58
BtsIMutI CAGTG 1 cut(s) 128
Cac8I GCNNGC 1 cut(s) 9
CaiI CAGNNNCTG 1 cut(s) 239
CciI TCATGA 1 cut(s) 199
CfoI GCGC 1 cut(s) 165
Csp6I GTAC 3 cut(s) 15, 24, 50
CviAII CATG 4 cut(s) 63, 106, 200, 359
CviJI RGCY 6 cut(s) 7, 96, 101, 211, 292, 305
CviKI_1 RGCY 6 cut(s) 7, 96, 101, 211, 292, 305
CviQI GTAC 3 cut(s) 15, 24, 50
DdeI CTNAG 1 cut(s) 97
DpnI GATC 5 cut(s) 46, 134, 195, 249, 348
DpnII GATC 5 cut(s) 44, 132, 193, 247, 346
Eam1104I CTCTTC 3 cut(s) 92, 198, 346
EarI CTCTTC 3 cut(s) 92, 198, 346
Eco130I CCWWGG 1 cut(s) 62
Eco147I AGGCCT 1 cut(s) 7
EcoT14I CCWWGG 1 cut(s) 62
ErhI CCWWGG 1 cut(s) 62
FaeI CATG 4 cut(s) 66, 109, 203, 362
FaiI YATR 7 cut(s) 64, 107, 145, 151, 201, 269, 360
FatI CATG 4 cut(s) 62, 105, 199, 358
FauI CCCGC 1 cut(s) 46
FbaI TGATCA 4 cut(s) 132, 193, 247, 346
Fnu4HI GCNGC 1 cut(s) 94
FokI GGATG 2 cut(s) 16, 45
Fsp4HI GCNGC 1 cut(s) 94
GlaI GCGC 1 cut(s) 164
GluI GCNGC 1 cut(s) 94
HaeIII GGCC 1 cut(s) 7
HapII CCGG 2 cut(s) 74, 279
HhaI GCGC 1 cut(s) 165
Hin1II CATG 4 cut(s) 66, 109, 203, 362
Hin6I GCGC 1 cut(s) 163
HinP1I GCGC 1 cut(s) 163
HinfI GANTC 1 cut(s) 236
HpaII CCGG 2 cut(s) 74, 279
HphI GGTGA 1 cut(s) 27
Hpy188I TCNGA 2 cut(s) 241, 346
Hpy188III TCNNGA 1 cut(s) 200
Hpy99I CGWCG 1 cut(s) 128
HpyAV CCTTC 1 cut(s) 112
HpyCH4III ACNGT 1 cut(s) 300
HpyCH4V TGCA 1 cut(s) 11
HpyF3I CTNAG 1 cut(s) 97
Hsp92II CATG 4 cut(s) 66, 109, 203, 362
HspAI GCGC 1 cut(s) 163
Ksp22I TGATCA 4 cut(s) 132, 193, 247, 346
Kzo9I GATC 5 cut(s) 44, 132, 193, 247, 346
LguI GCTCTTC 1 cut(s) 346
LmnI GCTCC 1 cut(s) 170
LpnPI CCDG 5 cut(s) 21, 55, 87, 292, 324
LweI GCATC 1 cut(s) 232
MaeIII GTNAC 1 cut(s) 108
MalI GATC 5 cut(s) 46, 134, 195, 249, 348
MboI GATC 5 cut(s) 44, 132, 193, 247, 346
MboII GAAGA 7 cut(s) 79, 131, 197, 200, 215, 296, 333
MlyI GAGTC 1 cut(s) 245
MmeI TCCRAC 1 cut(s) 195
MnlI CCTC 4 cut(s) 43, 95, 178, 304
MspI CCGG 2 cut(s) 74, 279
MvnI CGCG 1 cut(s) 163
NcoI CCATGG 1 cut(s) 62
NdeII GATC 5 cut(s) 44, 132, 193, 247, 346
NlaIII CATG 4 cut(s) 66, 109, 203, 362
NlaIV GGNNCC 1 cut(s) 78
PagI TCATGA 1 cut(s) 199
PceI AGGCCT 1 cut(s) 7
PciSI GCTCTTC 1 cut(s) 346
PkrI GCNGC 1 cut(s) 95
PleI GAGTC 1 cut(s) 244
PpsI GAGTC 1 cut(s) 244
PspN4I GGNNCC 1 cut(s) 78
PstNI CAGNNNCTG 1 cut(s) 239
RsaI GTAC 3 cut(s) 16, 25, 51
RsaNI GTAC 3 cut(s) 15, 24, 50
SapI GCTCTTC 1 cut(s) 346
SatI GCNGC 1 cut(s) 94
Sau3AI GATC 5 cut(s) 44, 132, 193, 247, 346
ScaI AGTACT 2 cut(s) 25, 51
SchI GAGTC 1 cut(s) 245
SetI ASST 2 cut(s) 87, 307
SfaNI GCATC 1 cut(s) 232
SfcI CTRYAG 1 cut(s) 231
SseBI AGGCCT 1 cut(s) 7
SsiI CCGC 2 cut(s) 39, 93
StuI AGGCCT 1 cut(s) 7
StyI CCWWGG 1 cut(s) 62
TaaI ACNGT 1 cut(s) 300
TatI WGTACW 3 cut(s) 14, 23, 49
TauI GCSGC 1 cut(s) 96
TscAI CASTG 1 cut(s) 135
TspDTI ATGAA 3 cut(s) 94, 216, 239
TspRI CASTG 1 cut(s) 135
ZrmI AGTACT 2 cut(s) 25, 51
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.