Rw2G047590

Protein GLUTAMINE DUMPER

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0008321
Physical Location & Seq
Forward (+)
74899878 .. 74900198
321 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G047590.1

Sequence Viewer

Length: 321 bp
ATGAGGCCTACAACTACAAGCAGCAGCACCAGAATTGTCCATCCGTGGAAGTCTCCATTACCTTACCTCTTTGGCAGCTTAGCCGTAATACTGCTACTCATTTTTGTTACATTGATCATCCTCGTCTGCTCGTACCGCGAGGGCTCTTCTGGATCATCAAGTGATAGAGATGAAGAGAAGCCGAAAAAGCCCAACACGAACAGTGCAGTGTGCGAAGACGAGCCTAAGATTGTTGTCATAATAATGGCCGGAGAAGACCAGCCCACGCACTTGGCTACACCGGTCACCTCTGTCTGCTCTTGCTCTTGCGAGAAAGTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0032879 GO:0032890 GO:0034762 GO:0034765 GO:0043269 GO:0044070 GO:0050789 GO:0051049 GO:0051952 GO:0051955 GO:0065007 GO:0080143 GO:1903789 GO:1903959
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

106

Amino Acids

11.51

Weight (kDa)

6.06

Isoelectric Point (pI)

37.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 138
AciI CCGC 1 cut(s) 136
AclWI GGATC 1 cut(s) 160
AcoI YGGCCR 1 cut(s) 246
AfaI GTAC 1 cut(s) 134
AgeI ACCGGT 1 cut(s) 280
AluBI AGCT 1 cut(s) 78
AluI AGCT 1 cut(s) 78
Alw26I GTCTC 1 cut(s) 57
AlwI GGATC 1 cut(s) 160
AoxI GGCC 2 cut(s) 5, 246
ApeKI GCWGC 3 cut(s) 21, 24, 75
AsiGI ACCGGT 1 cut(s) 280
AsuHPI GGTGA 1 cut(s) 277
BanII GRGCYC 1 cut(s) 146
BbsI GAAGAC 2 cut(s) 222, 261
BbvI GCAGC 3 cut(s) 33, 36, 87
BccI CCATC 1 cut(s) 48
BceAI ACGGC 1 cut(s) 68
BclI TGATCA 1 cut(s) 114
BcoDI GTCTC 1 cut(s) 57
BisI GCNGC 3 cut(s) 22, 25, 76
BlpI GCTNAGC 1 cut(s) 79
BlsI GCNGC 3 cut(s) 23, 26, 77
BpiI GAAGAC 2 cut(s) 222, 261
Bpu1102I GCTNAGC 1 cut(s) 79
BsaJI CCNNGG 1 cut(s) 44
BsaWI WCCGGW 1 cut(s) 280
Bse118I RCCGGY 1 cut(s) 280
BseDI CCNNGG 1 cut(s) 44
BseGI GGATG 2 cut(s) 40, 117
BseXI GCAGC 3 cut(s) 33, 36, 87
BsgI GTGCAG 1 cut(s) 225
Bsh1236I CGCG 1 cut(s) 138
BshFI GGCC 2 cut(s) 7, 248
BshTI ACCGGT 1 cut(s) 280
BsiSI CCGG 2 cut(s) 249, 281
BsmAI GTCTC 1 cut(s) 57
BsnI GGCC 2 cut(s) 7, 248
Bsp1286I GDGCHC 1 cut(s) 146
Bsp143I GATC 2 cut(s) 114, 152
Bsp1720I GCTNAGC 1 cut(s) 79
BspACI CCGC 1 cut(s) 136
BspANI GGCC 2 cut(s) 7, 248
BspFNI CGCG 1 cut(s) 138
BspPI GGATC 1 cut(s) 160
BspQI GCTCTTC 1 cut(s) 151
BsrFI RCCGGY 1 cut(s) 280
BssAI RCCGGY 1 cut(s) 280
BssECI CCNNGG 1 cut(s) 44
BssMI GATC 2 cut(s) 114, 152
Bst4CI ACNGT 1 cut(s) 203
Bst6I CTCTTC 2 cut(s) 151, 168
BstDEI CTNAG 2 cut(s) 79, 225
BstDSI CCRYGG 1 cut(s) 44
BstEII GGTNACC 1 cut(s) 283
BstF5I GGATG 2 cut(s) 40, 117
BstFNI CGCG 1 cut(s) 138
BstKTI GATC 2 cut(s) 117, 155
BstMAI GTCTC 1 cut(s) 57
BstMBI GATC 2 cut(s) 114, 152
BstMWI GCNNNNNNNGC 2 cut(s) 135, 187
BstPI GGTNACC 1 cut(s) 283
BstUI CGCG 1 cut(s) 138
BstV1I GCAGC 3 cut(s) 33, 36, 87
BstV2I GAAGAC 2 cut(s) 222, 261
BstXI CCANNNNNNTGG 1 cut(s) 271
BsuRI GGCC 2 cut(s) 7, 248
BtgI CCRYGG 1 cut(s) 44
BtsCI GGATG 2 cut(s) 40, 117
BtsI GCAGTG 1 cut(s) 213
BtsIMutI CAGTG 2 cut(s) 208, 213
Cfr10I RCCGGY 1 cut(s) 280
Csp6I GTAC 1 cut(s) 133
CspAI ACCGGT 1 cut(s) 280
CviQI GTAC 1 cut(s) 133
DdeI CTNAG 2 cut(s) 79, 225
DpnI GATC 2 cut(s) 116, 154
DpnII GATC 2 cut(s) 114, 152
EaeI YGGCCR 1 cut(s) 246
Eam1104I CTCTTC 2 cut(s) 151, 168
EarI CTCTTC 2 cut(s) 151, 168
Eco147I AGGCCT 1 cut(s) 7
Eco24I GRGCYC 1 cut(s) 146
Eco91I GGTNACC 1 cut(s) 283
EcoO65I GGTNACC 1 cut(s) 283
EcoT38I GRGCYC 1 cut(s) 146
FaiI YATR 1 cut(s) 239
FbaI TGATCA 1 cut(s) 114
Fnu4HI GCNGC 3 cut(s) 22, 25, 76
FokI GGATG 2 cut(s) 27, 104
FriOI GRGCYC 1 cut(s) 146
Fsp4HI GCNGC 3 cut(s) 22, 25, 76
GluI GCNGC 3 cut(s) 22, 25, 76
HaeIII GGCC 2 cut(s) 7, 248
HapII CCGG 2 cut(s) 249, 281
HpaII CCGG 2 cut(s) 249, 281
HphI GGTGA 1 cut(s) 277
Hpy188I TCNGA 1 cut(s) 320
Hpy188III TCNNGA 1 cut(s) 150
HpyCH4III ACNGT 1 cut(s) 203
HpyCH4V TGCA 1 cut(s) 206
HpyF10VI GCNNNNNNNGC 2 cut(s) 135, 187
HpyF3I CTNAG 2 cut(s) 79, 225
Ksp22I TGATCA 1 cut(s) 114
Kzo9I GATC 2 cut(s) 114, 152
LguI GCTCTTC 1 cut(s) 151
LpnPI CCDG 5 cut(s) 43, 135, 262, 272, 294
Lsp1109I GCAGC 3 cut(s) 33, 36, 87
MaeIII GTNAC 2 cut(s) 106, 283
MalI GATC 2 cut(s) 116, 154
MboI GATC 2 cut(s) 114, 152
MboII GAAGA 4 cut(s) 138, 185, 227, 266
MhlI GDGCHC 1 cut(s) 146
MluCI AATT 1 cut(s) 33
MnlI CCTC 4 cut(s) 77, 131, 133, 298
MslI CAYNNNNRTG 1 cut(s) 242
MspI CCGG 2 cut(s) 249, 281
MvnI CGCG 1 cut(s) 138
MwoI GCNNNNNNNGC 2 cut(s) 135, 187
NdeII GATC 2 cut(s) 114, 152
NmuCI GTSAC 1 cut(s) 283
PceI AGGCCT 1 cut(s) 7
PciSI GCTCTTC 1 cut(s) 151
PinAI ACCGGT 1 cut(s) 280
PkrI GCNGC 3 cut(s) 23, 26, 77
PspEI GGTNACC 1 cut(s) 283
RsaI GTAC 1 cut(s) 134
RsaNI GTAC 1 cut(s) 133
RseI CAYNNNNRTG 1 cut(s) 242
SapI GCTCTTC 1 cut(s) 151
SatI GCNGC 3 cut(s) 22, 25, 76
Sau3AI GATC 2 cut(s) 114, 152
SduI GDGCHC 1 cut(s) 146
SetI ASST 4 cut(s) 64, 69, 80, 290
SmiMI CAYNNNNRTG 1 cut(s) 242
Sse9I AATT 1 cut(s) 33
SseBI AGGCCT 1 cut(s) 7
SsiI CCGC 1 cut(s) 136
StuI AGGCCT 1 cut(s) 7
TaaI ACNGT 1 cut(s) 203
TasI AATT 1 cut(s) 33
TscAI CASTG 2 cut(s) 208, 213
TseFI GTSAC 1 cut(s) 283
TseI GCWGC 3 cut(s) 21, 24, 75
Tsp45I GTSAC 1 cut(s) 283
TspDTI ATGAA 1 cut(s) 186
TspGWI ACGGA 1 cut(s) 33
TspRI CASTG 2 cut(s) 208, 213
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.