Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0005763

Physical Location & Seq

Genomic Coordinates Forward (+)

19607897 .. 19612217

Gene Structure 4321 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G52890.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2805 bp

ATGGGGTCGTTTGCAGGCGCTTGTGAGATTGTGGAAGAGAAGGATGATGAAGTAAGATTGCCAAAACATTCCGGGAGATATGGTAAATCGGTTATGGGATCATCAAGTAAGGATTTGGTGGAGCGTAAGCAACGAGAGTATCATGGTTCTCTTGAGTATGACATTGATATGCTTTTTCAGTCTATTTCTGTTAAACCATCTACTACGAGGTTGATGAGTTCTTCTTTCCATCATCATGAGACGAGCGCGAGTGCCGGTCCAAGCAGGACCACAAGCCCTTCGAAGAGAATTGCGTCCATGAAAAAACCAGGGACACCTCAGTCTCCTAGATTTGTTGGTCTCTCTGATTCAGTTTCTTTGAAGCAGGCTCTTAGGGATCGTTGCATTTCTAAGGCGTCGGAAATGGCTGCTCAGAAACGGTTGTCGAAATCTGCTGCTGCATCTCCGAGGGTCTCAGAAGCTGACAGGATAAAGAGTTTGTATAACCAAGTTTCGAATGAATCTACTAGCAGCAGGTCTGGGCTTGTTCCTGTGGACAAGGGTAAAGGAAGTTTGGTTGAGATACCTTTGATGCCTGTAAACGATAAACCAAGCTCTTCAAAGAGCGTACCTCAACGGTTTGAAGATCCTTCTAACCCCATTTCTGAGCCATCTCAAGCTGGAACCAGTTTTGGATTACAAGGAGTGGGGAATCAAACGCGGGAGATTAAGCTGTTGCATAGATCCAACAAACCTGGGTCTTGTCTTAGTTCTGGCAGTGGAGATTATGAGATAGAGTTAGATGAAAATGTTGCGTCTCCTTCCACTCATGCATTTGTTGAAGATGATGTGATAGAAATAGACAAACACGTTACTTCACTGCCATCTCACTCTAGCAAGAAAGTCAATGCGACGGAGCTTGACAAGAATATTTCCTCATCTGCTGTAGACTCAGAGCAGAAAGGGAAGTTGGATGATGCACCTAATTCAGGGACAGAGAATGGCAAAACAGTACGGAAGGTAACAAGAATGATTCCACGTCCCAAACAACCGAAAAAGAAAATTTTGCTTAAGAAGAAGTTAAAAATCGGGGTTGTGTCAGCAACTTACCCAACAAAAGACGATGAAGAAATTGTTCCTTCCTTGGACTCTAGTGCCAATCAACTTCTCTGCCAGAGATGTCACTGTTCGTTGAAGAGCACCAGCATCGATGACAACCCACCTTCATATACTTCTAGTCATAATCCTAAGATTTGCACAGATAGTTTGAGCTCTGTTTCAAATAAAGAAGCTCATCAAGGATCTGACGAGAACTCCTCTGGCTCGTGTAATGTCAGTCAAAGCTCTGAAGCTGACATTGTCATAATGAAACAAGATGTTTCCTCTAGCAATAATAGTGGAATCGGTGCAATGGTAGAAAAAGAAACCGAGAATCCGACTTCCAGTGAGAAATTCGAGTTCTCTCTGAGTTCAAAAGATAGTCTTGGGGATTATAGCAGGAGCACAAGCATTAGTGAGGAGAGTAATCTGAGCCGATTTAGCTGTGGGAATAAGCCTCACATGTCGATGGATGTGAGATGGGAAGCGATTAAGCATATCAAGGTTCAATACGGCTCTTTGGGTTTACGACACTTCAACCTTCTGAAGAAACTTGGTTGTGGAGATATAGGAACAGTCTATCTCGCCGAGCTGATTGGTACAAACTGTTTGTTTGCCATAAAGGTTATGGACAACGAGTTCTTGGCGAGAAGGAAAAAGTCTCCCCGGGCACAAGCAGAAAGAGAAATACTTAAAATGTTGGACCATCCTTTTCTTCCTACATTATACGCGCAATTTACTTCGGATAATTTATCTTGTCTAGTCATGGAATATTGTCCTGGAGGAGATCTTCATGTCCTCAGACAGAAGCAGCTAGGCCGGTGTTTCCCTGAACCTGCAGCAAGATTCTATGTGGCCGAAATTCTCCTTGCACTGGAGTACTTACACATGCTTGGTATCATATACCGAGATCTGAAACCGGAAAACATTCTTGTCCGTGAAGATGGACACATTATGCTTACGGATTTTGACCTCTCACTCCGTTGTGCAGTGAACCCGACTCTTGTCAGGTCAAACTCTCCACCTGGTAAAGATCCCGCAAGGATTTCAGGTCCATACAACACATCCAACTGCATACAACCATTCTGTATCACCGAACCATCTTGCCAGGTTTCGTGTTTCAGCCCTAGGCTCTCCTCAAACCAACAACAAGGTAGAAAACCAAAAAGGGGTGATCATCTTTCGAAAACCCAACAACACTTGAGTAGATCATTGCCTCAGCTCGTGGCTGAACCAACCGAAGCAAGATCCAATTCCTTTGTGGGAACACACGAGTACCTAGCCCCAGAGATCATCAAAGGAGAAGGACATGGCGCTGCAGTTGACTGGTGGACTTTCGGGGTTCTCCTTTACGAGCTTTTATACGGGAAAACACCATTCAAAGGTTACAACAACGACGAGACTTTGGCCAATGTTGTGTTACAGAACCTCAAGTTTCCTGATAGCCCGCTTGTAAGCTTCCAGGCAAAAGACTTGATCAGGGGACTTCTTGTTAAGGAACCAGAGAACAGGCTCGGGTCAGAGAAAGGTTCTGTAGAGATCAAAAGACATCCTTTTTTTGAAGGATTGAATTGGGCTCTGATCCGGTGTGCAATCCCGCCTGAGCTACCGGATTTCTATGAGTATGGTGGTGGACCAGAGGCAGCGGCGGATTCGCCTGGAGGCAGTAATAATAGGTATCTTGAATGTAAAGCCATAGGCGATCATCTTGAGTTCGAGTTGTTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0023052 GO:0035556 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

934

Amino Acids

102.69

Weight (kDa)

7.3

Isoelectric Point (pI)

51.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	538 - 687	1.4e-35	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	539 - 688	6.3e-19	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	776 - 879	5.1e-21	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	782 - 863	1.3e-07	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0005763)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G36350 AT3G52890 AT3G52890 AT3G52890 AT3G52890 AT5G03640 AT5G03640
fragaria_vesca	FvH4_6g18180
malus_domestica	MD12G1021500.v1.1 MD14G1018600.v1.1
prunus_persica	Prupe.7G114900_v2.0.a1
pyrus_communis	pycom12g02020 pycom14g01780
rosa_chinensis	RchiOBHm_Chr3g0472511
rosa_laevigata	RLG00000024074
rosa_multiflora	Rmu_co8030082.1_g000001 Rmu_co8221566.1_g000001 Rmu_co8433985.1_g000001 Rmu_sc0011581.1_g000002 Rmu_sc0020040.1_g000002
rosa_roxburghii	Rroxscaffold_6G00408870
rosa_rugosa	Rorug03G0126100
rosa_samantha	Rh3AG178000 Rh3BG203900 Rh3CG194300 Rh3CG201400 Rh3DG171000
rosa_wichuraiana	Rw3G016360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	319
Acc36I	ACCTGC	2 cut(s)	504, 1921
AccI	GTMKAC	1 cut(s)	927
AccII	CGCG	3 cut(s)	248, 700, 1808
AciI	CCGC	6 cut(s)	700, 2115, 2525, 2675, 2723, 2726
AclWI	GGATC	8 cut(s)	106, 384, 620, 717, 1288, 2105, 2319, 2653
AcoI	YGGCCR	2 cut(s)	1932, 2484
AcsI	RAATTY	3 cut(s)	1041, 1430, 1938
AcuI	CTGAAG	2 cut(s)	1347, 1643
AcyI	GRCGYC	1 cut(s)	395
AfaI	GTAC	5 cut(s)	609, 993, 1678, 1958, 2354
AfiI	CCNNNNNNNGG	4 cut(s)	968, 1951, 2246, 2459
AflII	CTTAAG	1 cut(s)	1049
AflIII	ACRYGT	2 cut(s)	847, 1539
AjiI	CACGTC	1 cut(s)	1019
AjnI	CCWGG	7 cut(s)	307, 733, 1855, 2101, 2184, 2538, 2734
AjuI	GAANNNNNNNTTGG	2 cut(s)	932, 964
AloI	GAACNNNNNNTCC	2 cut(s)	1700, 1732
Alw21I	GWGCWC	3 cut(s)	1181, 1253, 1484
Alw26I	GTCTC	7 cut(s)	233, 327, 344, 457, 801, 1743, 2471
AlwI	GGATC	8 cut(s)	106, 384, 620, 717, 1288, 2105, 2319, 2653
AlwNI	CAGNNNCTG	1 cut(s)	461
Ama87I	CYCGRG	2 cut(s)	1743, 2591
AoxI	GGCC	3 cut(s)	1894, 1932, 2484
ApeKI	GCWGC	8 cut(s)	407, 434, 437, 510, 1888, 1916, 2393, 2720
ApoI	RAATTY	3 cut(s)	1041, 1430, 1938
Asp700I	GAANNNNTTC	2 cut(s)	1113, 2004
AspA2I	CCTAGG	1 cut(s)	2204
AspLEI	GCGC	4 cut(s)	20, 248, 1810, 2393
AspS9I	GGNCC	5 cut(s)	257, 267, 1780, 2129, 2711
AsuC2I	CCSGG	3 cut(s)	73, 1744, 1745
AsuHPI	GGTGA	2 cut(s)	2161, 2261
AsuII	TTCGAA	3 cut(s)	281, 494, 2261
AvaI	CYCGRG	2 cut(s)	1743, 2591
AvaII	GGWCC	5 cut(s)	257, 267, 1780, 2129, 2711
AvrII	CCTAGG	1 cut(s)	2204
BaeGI	GKGCMC	1 cut(s)	1750
BaeI	ACNNNNGTAYC	4 cut(s)	122, 155, 2336, 2369
BalI	TGGCCA	1 cut(s)	2486
BanII	GRGCYC	2 cut(s)	1253, 2656
BauI	CACGAG	3 cut(s)	1303, 2300, 2348
Bbv12I	GWGCWC	3 cut(s)	1181, 1253, 1484
BbvCI	CCTCAGC	1 cut(s)	2295
BbvI	GCAGC	8 cut(s)	394, 421, 424, 522, 1900, 1928, 2380, 2732
BccI	CCATC	9 cut(s)	205, 237, 658, 871, 1540, 1551, 1791, 2015, 2185
BceAI	ACGGC	1 cut(s)	1606
BcgI	CGANNNNNNTGC	2 cut(s)	1168, 1202
BciT130I	CCWGG	7 cut(s)	309, 735, 1857, 2103, 2186, 2540, 2736
BclI	TGATCA	2 cut(s)	2251, 2553
BcnI	CCSGG	3 cut(s)	73, 1744, 1745
BcoDI	GTCTC	7 cut(s)	233, 327, 344, 457, 801, 1743, 2471
BfmI	CTRYAG	4 cut(s)	924, 1914, 2394, 2610
BfoI	RGCGCY	2 cut(s)	21, 2394
BfrI	CTTAAG	1 cut(s)	1049
BfuAI	ACCTGC	2 cut(s)	504, 1921
BglII	AGATCT	2 cut(s)	1864, 1987
BisI	GCNGC	9 cut(s)	408, 435, 438, 511, 1889, 1917, 2394, 2721, 2724
BlnI	CCTAGG	1 cut(s)	2204
BlsI	GCNGC	9 cut(s)	409, 436, 439, 512, 1890, 1918, 2395, 2722, 2725
BmcAI	AGTACT	1 cut(s)	1958
Bme18I	GGWCC	5 cut(s)	257, 267, 1780, 2129, 2711
BmeT110I	CYCGRG	2 cut(s)	1743, 2591
BmgBI	CACGTC	1 cut(s)	1019
BmgT120I	GGNCC	5 cut(s)	257, 267, 1780, 2129, 2711
BmiI	GGNNCC	2 cut(s)	664, 2577
BmsI	GCATC	4 cut(s)	449, 561, 946, 1194
BoxI	GACNNNNGTC	1 cut(s)	2081
BplI	GAGNNNNNCTC	4 cut(s)	595, 627, 1280, 1312
BpmI	CTGGAG	3 cut(s)	1878, 1973, 2757
Bpu10I	CCTNAGC	2 cut(s)	2295, 2679
Bpu14I	TTCGAA	3 cut(s)	281, 494, 2261
BpuEI	CTTGAG	4 cut(s)	173, 639, 2299, 2492
BpuMI	CCSGG	3 cut(s)	73, 1744, 1745
Bsa29I	ATCGAT	1 cut(s)	1188
BsaHI	GRCGYC	1 cut(s)	395
BsaI	GGTCTC	2 cut(s)	344, 457
BsaJI	CCNNGG	7 cut(s)	308, 446, 734, 1122, 1742, 1743, 2204
BsaWI	WCCGGW	3 cut(s)	1996, 2661, 2686
BsaXI	ACNNNNNCTCC	4 cut(s)	67, 97, 1277, 1307
Bsc4I	CCNNNNNNNGG	4 cut(s)	968, 1951, 2246, 2459
Bse118I	RCCGGY	2 cut(s)	254, 1896
Bse1I	ACTGG	4 cut(s)	666, 1422, 1956, 2408
Bse3DI	GCAATG	2 cut(s)	1395, 2288
BseBI	CCWGG	7 cut(s)	309, 735, 1857, 2103, 2186, 2540, 2736
BseCI	ATCGAT	1 cut(s)	1188
BseDI	CCNNGG	7 cut(s)	308, 446, 734, 1122, 1742, 1743, 2204
BseGI	GGATG	6 cut(s)	49, 958, 1555, 1783, 2141, 2626
BseLI	CCNNNNNNNGG	4 cut(s)	968, 1951, 2246, 2459
BseMI	GCAATG	2 cut(s)	1395, 2288
BseNI	ACTGG	4 cut(s)	666, 1422, 1956, 2408
BseRI	GAGGAG	4 cut(s)	1285, 1511, 1875, 2203
BseSI	GKGCMC	1 cut(s)	1750
BseXI	GCAGC	8 cut(s)	394, 421, 424, 522, 1900, 1928, 2380, 2732
BsgI	GTGCAG	1 cut(s)	2085
Bsh1236I	CGCG	3 cut(s)	248, 700, 1808
BshFI	GGCC	3 cut(s)	1896, 1934, 2486
BshVI	ATCGAT	1 cut(s)	1188
BsiHKAI	GWGCWC	3 cut(s)	1181, 1253, 1484
BsiHKCI	CYCGRG	2 cut(s)	1743, 2591
BsiSI	CCGG	7 cut(s)	72, 255, 1744, 1897, 1997, 2662, 2687
BslFI	GGGAC	4 cut(s)	325, 985, 1005, 2574
BslI	CCNNNNNNNGG	4 cut(s)	968, 1951, 2246, 2459
BsmAI	GTCTC	7 cut(s)	233, 327, 344, 457, 801, 1743, 2471
BsmBI	CGTCTC	2 cut(s)	233, 801
BsmFI	GGGAC	4 cut(s)	325, 985, 1005, 2574
BsnI	GGCC	3 cut(s)	1896, 1934, 2486
Bso31I	GGTCTC	2 cut(s)	344, 457
BsoBI	CYCGRG	2 cut(s)	1743, 2591
Bsp119I	TTCGAA	3 cut(s)	281, 494, 2261
Bsp1286I	GDGCHC	5 cut(s)	1181, 1253, 1484, 1750, 2656
BspACI	CCGC	6 cut(s)	700, 2115, 2525, 2675, 2723, 2726
BspANI	GGCC	3 cut(s)	1896, 1934, 2486
BspDI	ATCGAT	1 cut(s)	1188
BspFNI	CGCG	3 cut(s)	248, 700, 1808
BspHI	TCATGA	1 cut(s)	235
BspLI	GGNNCC	2 cut(s)	664, 2577
BspMAI	CTGCAG	2 cut(s)	1918, 2398
BspMI	ACCTGC	2 cut(s)	504, 1921
BspPI	GGATC	8 cut(s)	106, 384, 620, 717, 1288, 2105, 2319, 2653
BspQI	GCTCTTC	2 cut(s)	601, 1169
BspT104I	TTCGAA	3 cut(s)	281, 494, 2261
BspTI	CTTAAG	1 cut(s)	1049
BspTNI	GGTCTC	2 cut(s)	344, 457
BsrDI	GCAATG	2 cut(s)	1395, 2288
BsrFI	RCCGGY	2 cut(s)	254, 1896
BsrI	ACTGG	4 cut(s)	666, 1422, 1956, 2408
BssAI	RCCGGY	2 cut(s)	254, 1896
BssECI	CCNNGG	7 cut(s)	308, 446, 734, 1122, 1742, 1743, 2204
BssNI	GRCGYC	1 cut(s)	395
BssSI	CACGAG	3 cut(s)	1303, 2300, 2348
BssT1I	CCWWGG	2 cut(s)	1122, 2204
Bst2BI	CACGAG	3 cut(s)	1303, 2300, 2348
Bst2UI	CCWGG	7 cut(s)	309, 735, 1857, 2103, 2186, 2540, 2736
Bst4CI	ACNGT	6 cut(s)	420, 618, 991, 1166, 1654, 1685
Bst6I	CTCTTC	4 cut(s)	30, 278, 601, 1169
BstACI	GRCGYC	1 cut(s)	395
BstAFI	CTTAAG	1 cut(s)	1049
BstBI	TTCGAA	3 cut(s)	281, 494, 2261
BstC8I	GCNNGC	3 cut(s)	16, 366, 2525
BstENI	CCTNNNNNAGG	1 cut(s)	966
BstF5I	GGATG	6 cut(s)	49, 958, 1555, 1783, 2141, 2626
BstFNI	CGCG	3 cut(s)	248, 700, 1808
BstH2I	RGCGCY	2 cut(s)	21, 2394
BstHHI	GCGC	4 cut(s)	20, 248, 1810, 2393
BstMAI	GTCTC	7 cut(s)	233, 327, 344, 457, 801, 1743, 2471
BstMWI	GCNNNNNNNGC	1 cut(s)	1518
BstNI	CCWGG	7 cut(s)	309, 735, 1857, 2103, 2186, 2540, 2736
BstNSI	RCATGY	2 cut(s)	1543, 1969
BstPAI	GACNNNNGTC	1 cut(s)	2081
BstSFI	CTRYAG	4 cut(s)	924, 1914, 2394, 2610
BstSLI	GKGCMC	1 cut(s)	1750
BstUI	CGCG	3 cut(s)	248, 700, 1808
BstV1I	GCAGC	8 cut(s)	394, 421, 424, 522, 1900, 1928, 2380, 2732
BstX2I	RGATCY	7 cut(s)	625, 722, 1280, 1864, 1987, 2110, 2324
BstYI	RGATCY	7 cut(s)	625, 722, 1280, 1864, 1987, 2110, 2324
Bsu15I	ATCGAT	1 cut(s)	1188
BsuRI	GGCC	3 cut(s)	1896, 1934, 2486
BsuTUI	ATCGAT	1 cut(s)	1188
BtrI	CACGTC	1 cut(s)	1019
BtsCI	GGATG	6 cut(s)	49, 958, 1555, 1783, 2141, 2626
BtsI	GCAGTG	3 cut(s)	763, 857, 2073
BtsIMutI	CAGTG	6 cut(s)	763, 857, 1162, 1429, 1949, 2073
BveI	ACCTGC	2 cut(s)	504, 1921
Cac8I	GCNNGC	3 cut(s)	16, 366, 2525
CaiI	CAGNNNCTG	1 cut(s)	461
CciI	TCATGA	1 cut(s)	235
CfoI	GCGC	4 cut(s)	20, 248, 1810, 2393
Cfr10I	RCCGGY	2 cut(s)	254, 1896
Cfr13I	GGNCC	5 cut(s)	257, 267, 1780, 2129, 2711
Cfr9I	CCCGGG	1 cut(s)	1743
ClaI	ATCGAT	1 cut(s)	1188
CseI	GACGC	3 cut(s)	282, 384, 783
CsiI	ACCWGGT	1 cut(s)	2101
Csp6I	GTAC	5 cut(s)	608, 992, 1677, 1957, 2353
CspCI	CAANNNNNGTGG	2 cut(s)	1357, 1392
CviAII	CATG	9 cut(s)	143, 236, 298, 809, 1540, 1843, 1871, 1966, 2387
CviQI	GTAC	5 cut(s)	608, 992, 1677, 1957, 2353
DrdI	GACNNNNNNGTC	1 cut(s)	319
DseDI	GACNNNNNNGTC	1 cut(s)	319
EaeI	YGGCCR	2 cut(s)	1932, 2484
Eam1104I	CTCTTC	4 cut(s)	30, 278, 601, 1169
EarI	CTCTTC	4 cut(s)	30, 278, 601, 1169
EciI	GGCGGA	1 cut(s)	2741
Ecl136II	GAGCTC	1 cut(s)	1251
Eco130I	CCWWGG	2 cut(s)	1122, 2204
Eco24I	GRGCYC	2 cut(s)	1253, 2656
Eco31I	GGTCTC	2 cut(s)	344, 457
Eco47I	GGWCC	5 cut(s)	257, 267, 1780, 2129, 2711
Eco53kI	GAGCTC	1 cut(s)	1251
Eco57I	CTGAAG	2 cut(s)	1347, 1643
Eco88I	CYCGRG	2 cut(s)	1743, 2591
EcoICRI	GAGCTC	1 cut(s)	1251
EcoNI	CCTNNNNNAGG	1 cut(s)	966
EcoRII	CCWGG	7 cut(s)	307, 733, 1855, 2101, 2184, 2538, 2734
EcoT14I	CCWWGG	2 cut(s)	1122, 2204
EcoT22I	ATGCAT	1 cut(s)	814
EcoT38I	GRGCYC	2 cut(s)	1253, 2656
ErhI	CCWWGG	2 cut(s)	1122, 2204
Esp3I	CGTCTC	2 cut(s)	233, 801
FaeI	CATG	9 cut(s)	146, 239, 301, 812, 1543, 1846, 1874, 1969, 2390
FalI	AAGNNNNNCTT	4 cut(s)	1446, 1478, 2614, 2646
FaqI	GGGAC	4 cut(s)	325, 985, 1005, 2574
FatI	CATG	9 cut(s)	142, 235, 297, 808, 1539, 1842, 1870, 1965, 2386
FauI	CCCGC	4 cut(s)	693, 2122, 2532, 2682
FbaI	TGATCA	2 cut(s)	2251, 2553
FblI	GTMKAC	1 cut(s)	927
Fnu4HI	GCNGC	9 cut(s)	408, 435, 438, 511, 1889, 1917, 2394, 2721, 2724
FokI	GGATG	6 cut(s)	56, 965, 1562, 1770, 2128, 2613
FriOI	GRGCYC	2 cut(s)	1253, 2656
Fsp4HI	GCNGC	9 cut(s)	408, 435, 438, 511, 1889, 1917, 2394, 2721, 2724
GlaI	GCGC	4 cut(s)	19, 247, 1809, 2392
GluI	GCNGC	9 cut(s)	408, 435, 438, 511, 1889, 1917, 2394, 2721, 2724
GsuI	CTGGAG	3 cut(s)	1878, 1973, 2757
HaeII	RGCGCY	2 cut(s)	21, 2394
HaeIII	GGCC	3 cut(s)	1896, 1934, 2486
HapII	CCGG	7 cut(s)	72, 255, 1744, 1897, 1997, 2662, 2687
HgaI	GACGC	3 cut(s)	282, 384, 783
HhaI	GCGC	4 cut(s)	20, 248, 1810, 2393
Hin1I	GRCGYC	1 cut(s)	395
Hin1II	CATG	9 cut(s)	146, 239, 301, 812, 1543, 1846, 1874, 1969, 2390
Hin6I	GCGC	4 cut(s)	18, 246, 1808, 2391
HinP1I	GCGC	4 cut(s)	18, 246, 1808, 2391
HincII	GTYRAC	1 cut(s)	2401
HindII	GTYRAC	1 cut(s)	2401
HindIII	AAGCTT	1 cut(s)	2533
HpaII	CCGG	7 cut(s)	72, 255, 1744, 1897, 1997, 2662, 2687
HphI	GGTGA	2 cut(s)	2161, 2261
Hpy166II	GTNNAC	8 cut(s)	535, 580, 928, 1604, 2071, 2401, 2409, 2711
Hpy188III	TCNNGA	5 cut(s)	152, 236, 2516, 2759, 2786
Hpy8I	GTNNAC	8 cut(s)	535, 580, 928, 1604, 2071, 2401, 2409, 2711
Hpy99I	CGWCG	3 cut(s)	400, 895, 2477
HpyCH4III	ACNGT	6 cut(s)	420, 618, 991, 1166, 1654, 1685
HpyCH4IV	ACGT	2 cut(s)	849, 1018
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1518
HpySE526I	ACGT	2 cut(s)	849, 1018
Hsp92I	GRCGYC	1 cut(s)	395
Hsp92II	CATG	9 cut(s)	146, 239, 301, 812, 1543, 1846, 1874, 1969, 2390
HspAI	GCGC	4 cut(s)	18, 246, 1808, 2391
Ksp22I	TGATCA	2 cut(s)	2251, 2553
LguI	GCTCTTC	2 cut(s)	601, 1169
LmnI	GCTCC	3 cut(s)	121, 895, 1479
Lsp1109I	GCAGC	8 cut(s)	394, 421, 424, 522, 1900, 1928, 2380, 2732
LweI	GCATC	4 cut(s)	449, 561, 946, 1194
MabI	ACCWGGT	1 cut(s)	2101
MaeII	ACGT	2 cut(s)	849, 1018
MaeIII	GTNAC	5 cut(s)	850, 1000, 1160, 2462, 2496
MflI	RGATCY	7 cut(s)	625, 722, 1280, 1864, 1987, 2110, 2324
MhlI	GDGCHC	5 cut(s)	1181, 1253, 1484, 1750, 2656
MlsI	TGGCCA	1 cut(s)	2486
MluNI	TGGCCA	1 cut(s)	2486
MlyI	GAGTC	3 cut(s)	923, 1121, 2071
MmeI	TCCRAC	6 cut(s)	378, 750, 930, 1439, 1758, 2169
Mox20I	TGGCCA	1 cut(s)	2486
Mph1103I	ATGCAT	1 cut(s)	814
MroXI	GAANNNNTTC	2 cut(s)	1113, 2004
MscI	TGGCCA	1 cut(s)	2486
MseI	TTAA	8 cut(s)	192, 708, 1050, 1061, 1569, 1770, 2571, 2803
MslI	CAYNNNNRTG	3 cut(s)	167, 234, 1544
Msp20I	TGGCCA	1 cut(s)	2486
MspA1I	CMGCKG	1 cut(s)	2723
MspCI	CTTAAG	1 cut(s)	1049
MspI	CCGG	7 cut(s)	72, 255, 1744, 1897, 1997, 2662, 2687
MvaI	CCWGG	7 cut(s)	309, 735, 1857, 2103, 2186, 2540, 2736
MvnI	CGCG	3 cut(s)	248, 700, 1808
MwoI	GCNNNNNNNGC	1 cut(s)	1518
NciI	CCSGG	3 cut(s)	73, 1744, 1745
NlaIII	CATG	9 cut(s)	146, 239, 301, 812, 1543, 1846, 1874, 1969, 2390
NlaIV	GGNNCC	2 cut(s)	664, 2577
NmeAIII	GCCGAG	1 cut(s)	1690
NmuCI	GTSAC	1 cut(s)	1160
NsiI	ATGCAT	1 cut(s)	814
NspI	RCATGY	2 cut(s)	1543, 1969
NspV	TTCGAA	3 cut(s)	281, 494, 2261
PagI	TCATGA	1 cut(s)	235
PciI	ACATGT	1 cut(s)	1539
PciSI	GCTCTTC	2 cut(s)	601, 1169
PdmI	GAANNNNTTC	2 cut(s)	1113, 2004
PfeI	GAWTC	8 cut(s)	347, 500, 691, 1012, 1380, 1411, 1923, 2729
PflFI	GACNNNGTC	1 cut(s)	1337
PfoI	TCCNGGA	2 cut(s)	71, 1855
PkrI	GCNGC	9 cut(s)	409, 436, 439, 512, 1890, 1918, 2395, 2722, 2725
PleI	GAGTC	3 cut(s)	923, 1121, 2071
PpsI	GAGTC	3 cut(s)	923, 1121, 2071
PscI	ACATGT	1 cut(s)	1539
PshAI	GACNNNNGTC	1 cut(s)	2081
Psp124BI	GAGCTC	1 cut(s)	1253
Psp6I	CCWGG	7 cut(s)	307, 733, 1855, 2101, 2184, 2538, 2734
PspGI	CCWGG	7 cut(s)	307, 733, 1855, 2101, 2184, 2538, 2734
PspN4I	GGNNCC	2 cut(s)	664, 2577
PspPI	GGNCC	5 cut(s)	257, 267, 1780, 2129, 2711
PstI	CTGCAG	2 cut(s)	1918, 2398
PstNI	CAGNNNCTG	1 cut(s)	461
PsuI	RGATCY	7 cut(s)	625, 722, 1280, 1864, 1987, 2110, 2324
PsyI	GACNNNGTC	1 cut(s)	1337
RsaI	GTAC	5 cut(s)	609, 993, 1678, 1958, 2354
RsaNI	GTAC	5 cut(s)	608, 992, 1677, 1957, 2353
RseI	CAYNNNNRTG	3 cut(s)	167, 234, 1544
SacI	GAGCTC	1 cut(s)	1253
SapI	GCTCTTC	2 cut(s)	601, 1169
SaqAI	TTAA	8 cut(s)	192, 708, 1050, 1061, 1569, 1770, 2571, 2803
SatI	GCNGC	9 cut(s)	408, 435, 438, 511, 1889, 1917, 2394, 2721, 2724
Sau96I	GGNCC	5 cut(s)	257, 267, 1780, 2129, 2711
ScaI	AGTACT	1 cut(s)	1958
SchI	GAGTC	3 cut(s)	923, 1121, 2071
SduI	GDGCHC	5 cut(s)	1181, 1253, 1484, 1750, 2656
SexAI	ACCWGGT	1 cut(s)	2101
SfaNI	GCATC	4 cut(s)	449, 561, 946, 1194
SfcI	CTRYAG	4 cut(s)	924, 1914, 2394, 2610
SfuI	TTCGAA	3 cut(s)	281, 494, 2261
SinI	GGWCC	5 cut(s)	257, 267, 1780, 2129, 2711
SmaI	CCCGGG	1 cut(s)	1745
SmiMI	CAYNNNNRTG	3 cut(s)	167, 234, 1544
SmlI	CTYRAG	6 cut(s)	152, 654, 1049, 2278, 2507, 2786
SmoI	CTYRAG	6 cut(s)	152, 654, 1049, 2278, 2507, 2786
SsiI	CCGC	6 cut(s)	700, 2115, 2525, 2675, 2723, 2726
SspI	AATATT	2 cut(s)	910, 1850
SstI	GAGCTC	1 cut(s)	1253
StyI	CCWWGG	2 cut(s)	1122, 2204
TaaI	ACNGT	6 cut(s)	420, 618, 991, 1166, 1654, 1685
TaiI	ACGT	2 cut(s)	852, 1021
TaqI	TCGA	8 cut(s)	281, 425, 494, 1188, 1434, 1544, 2261, 2793
TatI	WGTACW	1 cut(s)	1956
TauI	GCSGC	1 cut(s)	2726
TfiI	GAWTC	8 cut(s)	347, 500, 691, 1012, 1380, 1411, 1923, 2729
Tru1I	TTAA	8 cut(s)	192, 708, 1050, 1061, 1569, 1770, 2571, 2803
Tru9I	TTAA	8 cut(s)	192, 708, 1050, 1061, 1569, 1770, 2571, 2803
TscAI	CASTG	6 cut(s)	763, 864, 1169, 1429, 1956, 2073
TseFI	GTSAC	1 cut(s)	1160
TseI	GCWGC	8 cut(s)	407, 434, 437, 510, 1888, 1916, 2393, 2720
Tsp45I	GTSAC	1 cut(s)	1160
TspDTI	ATGAA	8 cut(s)	63, 314, 513, 798, 1119, 1194, 1361, 1859
TspGWI	ACGGA	5 cut(s)	908, 1009, 2003, 2048, 2054
TspMI	CCCGGG	1 cut(s)	1743
TspRI	CASTG	6 cut(s)	763, 864, 1169, 1429, 1956, 2073
Tth111I	GACNNNGTC	1 cut(s)	1337
Vha464I	CTTAAG	1 cut(s)	1049
VpaK11BI	GGWCC	5 cut(s)	257, 267, 1780, 2129, 2711
XagI	CCTNNNNNAGG	1 cut(s)	966
XapI	RAATTY	3 cut(s)	1041, 1430, 1938
XceI	RCATGY	2 cut(s)	1543, 1969
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1702, 2335
XmaI	CCCGGG	1 cut(s)	1743
XmaJI	CCTAGG	1 cut(s)	2204
XmiI	GTMKAC	1 cut(s)	927
XmnI	GAANNNNTTC	2 cut(s)	1113, 2004
ZrmI	AGTACT	1 cut(s)	1958
Zsp2I	ATGCAT	1 cut(s)	814

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.