pycom14g01780

Serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
OG0005763
Physical Location & Seq
Reverse (-)
1313332 .. 1314690
1359 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom14g01780.1

Sequence Viewer

Length: 1359 bp
ATGGCTTCGTCTTCCGGTACTTCTGAAATTGTTGAAGCAAAAGACGAGCTAATTACAGGTCAATATTCTCACGGAATGCATCGAACGAATCCTGGATTGAGTAGGGGTGAGAAAGATCGGAAGCTTCCTCCTGTTCTAAAACTGGGATACAAGGATTCTCTAGAAGATGATATTAATAAGCTCTTTGAGGCAATCAAAACATCATCCAAGGGTTCAGATCATTCAAAGCAAGTAGGCACTAGCCCTTTAAATAGAAATGCCTTAAAGAAACCAATTACAGTGGGCGTATCTCGCTCACCAGGGATTGGGAATTCAGAACCGGCGACTCTGAAGCAGGCGTTAAGAGAGCTCTCTATTACCAAGGCATCAGAAATGGCTGCTATGAAACGGTTATCAAAATTGACAAGTCCTTCAAGACCCTCGGAATCTGGGAGGATCAAGACGTTATACAATGCAGTTGTTGTTCAATCCAGTCACTCTGGCGCCTCCTCAAGTGAAGATAGGGGAAATATGGTTGAAATCTCTCTGGTGCCAGAAGAAAGCATTTCAAATTCTTGCGAGGAGCTGTCAGAGCATCCTCAAATGTCCAAGATGAAGTCATCAAGCCAGAGTGGACATTCTTCTCCTCGATTTGCCATTGGGAAAATGGAAAATAATTCTGGGAGCACAATAGTGCAAAATGAAAGTACTTCCAGTTGCAAGTTAAGGACAGTAGGGAAGCAAACGGTAAAGGCAGAACTGGGACAGAAGGAGAAAAATAAATCTACGAATGACCATATTTCAGAACTTGCTGAAAATGTCCCTTCCAACACCATGTTACGGACAAAAACTAAGTCAGAGCTGGGGAAGAAAGAGAAACTTAAATCTACAAGTGGCAATACTTCAGGACTTGTTCAAAATGTTCCTGCCAAGACCAAGTTAGCGAATAAGGTATCAGCAGCAAAACCAGGGCGAAAAGTCAAGTTGCATGTAGTACCTTCTTCATCTAGTTTGGTGAATGTAAATCCGGCAAGCAAAGTATCCAGAAATACCGTCCGCTCTGTAAAACAAGCCAGCAGGAATAGGAATATCTTAAAGAAGAAGACAAGACAACTGGTCTGTGAGAGATGCCAATGTGCAATACAAGGTGCTGGACAACAATCCAATCAAGGTTCTTTGTCTCCCCAGTTTAACGGTCTTACTACTGAAATAAACTCAAGTAATGTGTACAGCACTCCAGGTAAACCAGGCTTCACCTTGGACAACAATAAGACTGGCAATACAGGAGGAGCTGACATCATGAAATCAAAAACGAACTCCAAATCAAAAGAAAAAGGGGAATTCTCCCAAAGCTCAAAAAGTAGCCAAGGTGATCGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase

Protein Analysis

453

Amino Acids

48.43

Weight (kDa)

9.95

Isoelectric Point (pI)

50.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 482, 529
AccB7I CCANNNNNTGG 1 cut(s) 305
AccBSI CCGCTC 1 cut(s) 1038
AciI CCGC 1 cut(s) 1036
AclWI GGATC 1 cut(s) 443
AcsI RAATTY 3 cut(s) 310, 550, 1319
AcuI CTGAAG 2 cut(s) 350, 867
AcyI GRCGYC 1 cut(s) 483
AfaI GTAC 4 cut(s) 19, 688, 975, 1208
AfiI CCNNNNNNNGG 2 cut(s) 305, 819
AgsI TTSAA 7 cut(s) 35, 225, 414, 467, 518, 549, 896
AhdI GACNNNNNGTC 1 cut(s) 1094
AjnI CCWGG 5 cut(s) 91, 298, 946, 1216, 1225
AleI CACNNNNGTG 1 cut(s) 671
AluBI AGCT 8 cut(s) 49, 124, 181, 349, 565, 841, 1271, 1332
AluI AGCT 8 cut(s) 49, 124, 181, 349, 565, 841, 1271, 1332
Alw21I GWGCWC 2 cut(s) 351, 668
Alw26I GTCTC 1 cut(s) 1164
AlwI GGATC 1 cut(s) 443
ApeKI GCWGC 2 cut(s) 377, 938
ApoI RAATTY 3 cut(s) 310, 550, 1319
ArsI GACNNNNNNTTYG 2 cut(s) 818, 850
AseI ATTAAT 1 cut(s) 174
AspLEI GCGC 1 cut(s) 485
AsuHPI GGTGA 4 cut(s) 119, 288, 1006, 1225
BanI GGYRCC 2 cut(s) 482, 529
BanII GRGCYC 1 cut(s) 351
BbsI GAAGAC 2 cut(s) 3, 1088
Bbv12I GWGCWC 2 cut(s) 351, 668
BbvI GCAGC 2 cut(s) 364, 950
BciT130I CCWGG 5 cut(s) 93, 300, 948, 1218, 1227
BciVI GTATCC 2 cut(s) 140, 1030
BcoDI GTCTC 1 cut(s) 1164
BfaI CTAG 3 cut(s) 161, 240, 987
BfoI RGCGCY 1 cut(s) 486
BfuI GTATCC 2 cut(s) 140, 1030
BisI GCNGC 2 cut(s) 378, 939
BlsI GCNGC 2 cut(s) 379, 940
BmcAI AGTACT 1 cut(s) 688
Bme1390I CCNGG 5 cut(s) 93, 300, 948, 1218, 1227
BmeRI GACNNNNNGTC 1 cut(s) 1094
BmiI GGNNCC 2 cut(s) 484, 531
BmrFI CCNGG 5 cut(s) 93, 300, 948, 1218, 1227
BmrI ACTGGG 3 cut(s) 152, 749, 1159
BmsI GCATC 4 cut(s) 88, 374, 583, 1097
BmuI ACTGGG 3 cut(s) 152, 749, 1159
BpiI GAAGAC 2 cut(s) 3, 1088
BpmI CTGGAG 1 cut(s) 1200
BpuEI CTTGAG 2 cut(s) 475, 1180
Bsa29I ATCGAT 1 cut(s) 1354
BsaHI GRCGYC 1 cut(s) 483
BsaJI CCNNGG 7 cut(s) 207, 299, 360, 420, 947, 1236, 1345
BsaWI WCCGGW 1 cut(s) 14
Bsc4I CCNNNNNNNGG 2 cut(s) 305, 819
Bse118I RCCGGY 1 cut(s) 319
Bse1I ACTGG 7 cut(s) 147, 471, 693, 744, 1098, 1165, 1258
BseBI CCWGG 5 cut(s) 93, 300, 948, 1218, 1227
BseCI ATCGAT 1 cut(s) 1354
BseDI CCNNGG 7 cut(s) 207, 299, 360, 420, 947, 1236, 1345
BseGI GGATG 2 cut(s) 203, 574
BseLI CCNNNNNNNGG 2 cut(s) 305, 819
BseNI ACTGG 7 cut(s) 147, 471, 693, 744, 1098, 1165, 1258
BseRI GAGGAG 4 cut(s) 478, 575, 615, 1281
BseXI GCAGC 2 cut(s) 364, 950
BseYI CCCAGC 1 cut(s) 841
BshNI GGYRCC 2 cut(s) 482, 529
BshVI ATCGAT 1 cut(s) 1354
BsiHKAI GWGCWC 2 cut(s) 351, 668
BsiSI CCGG 3 cut(s) 15, 320, 1007
BslFI GGGAC 2 cut(s) 756, 785
BslI CCNNNNNNNGG 2 cut(s) 305, 819
BsmAI GTCTC 1 cut(s) 1164
BsmFI GGGAC 2 cut(s) 756, 785
BsmI GAATGC 1 cut(s) 81
Bsp1286I GDGCHC 2 cut(s) 351, 668
Bsp1407I TGTACA 1 cut(s) 1206
Bsp143I GATC 4 cut(s) 115, 217, 435, 1351
BspACI CCGC 1 cut(s) 1036
BspDI ATCGAT 1 cut(s) 1354
BspHI TCATGA 1 cut(s) 1278
BspLI GGNNCC 2 cut(s) 484, 531
BspPI GGATC 1 cut(s) 443
BspT107I GGYRCC 2 cut(s) 482, 529
BsrBI CCGCTC 1 cut(s) 1038
BsrFI RCCGGY 1 cut(s) 319
BsrGI TGTACA 1 cut(s) 1206
BsrI ACTGG 7 cut(s) 147, 471, 693, 744, 1098, 1165, 1258
BssAI RCCGGY 1 cut(s) 319
BssECI CCNNGG 7 cut(s) 207, 299, 360, 420, 947, 1236, 1345
BssMI GATC 4 cut(s) 115, 217, 435, 1351
BssNI GRCGYC 1 cut(s) 483
BssT1I CCWWGG 4 cut(s) 207, 360, 1236, 1345
Bst2UI CCWGG 5 cut(s) 93, 300, 948, 1218, 1227
Bst4CI ACNGT 6 cut(s) 280, 390, 712, 727, 1033, 1175
BstACI GRCGYC 1 cut(s) 483
BstAUI TGTACA 1 cut(s) 1206
BstC8I GCNNGC 3 cut(s) 336, 1012, 1054
BstDEI CTNAG 1 cut(s) 831
BstF5I GGATG 2 cut(s) 203, 574
BstH2I RGCGCY 1 cut(s) 486
BstHHI GCGC 1 cut(s) 485
BstKTI GATC 4 cut(s) 118, 220, 438, 1354
BstMAI GTCTC 1 cut(s) 1164
BstMBI GATC 4 cut(s) 115, 217, 435, 1351
BstMWI GCNNNNNNNGC 2 cut(s) 291, 571
BstNI CCWGG 5 cut(s) 93, 300, 948, 1218, 1227
BstNSI RCATGY 1 cut(s) 971
BstSCI CCNGG 5 cut(s) 91, 298, 946, 1216, 1225
BstV1I GCAGC 2 cut(s) 364, 950
BstV2I GAAGAC 2 cut(s) 3, 1088
Bsu15I ATCGAT 1 cut(s) 1354
BsuI GTATCC 2 cut(s) 140, 1030
BsuTUI ATCGAT 1 cut(s) 1354
BtsCI GGATG 2 cut(s) 203, 574
BtsIMutI CAGTG 1 cut(s) 285
Cac8I GCNNGC 3 cut(s) 336, 1012, 1054
CciI TCATGA 1 cut(s) 1278
CfoI GCGC 1 cut(s) 485
Cfr10I RCCGGY 1 cut(s) 319
ClaI ATCGAT 1 cut(s) 1354
Csp6I GTAC 4 cut(s) 18, 687, 974, 1207
CspCI CAANNNNNGTGG 2 cut(s) 261, 296
CviAII CATG 3 cut(s) 814, 968, 1279
CviQI GTAC 4 cut(s) 18, 687, 974, 1207
DdeI CTNAG 1 cut(s) 831
DinI GGCGCC 1 cut(s) 484
DpnI GATC 4 cut(s) 117, 219, 437, 1353
DpnII GATC 4 cut(s) 115, 217, 435, 1351
DraI TTTAAA 1 cut(s) 249
DriI GACNNNNNGTC 1 cut(s) 1094
Eam1105I GACNNNNNGTC 1 cut(s) 1094
Ecl136II GAGCTC 1 cut(s) 349
Eco130I CCWWGG 4 cut(s) 207, 360, 1236, 1345
Eco24I GRGCYC 1 cut(s) 351
Eco53kI GAGCTC 1 cut(s) 349
Eco57I CTGAAG 2 cut(s) 350, 867
EcoICRI GAGCTC 1 cut(s) 349
EcoRI GAATTC 2 cut(s) 310, 1319
EcoRII CCWGG 5 cut(s) 91, 298, 946, 1216, 1225
EcoT14I CCWWGG 4 cut(s) 207, 360, 1236, 1345
EcoT22I ATGCAT 1 cut(s) 81
EcoT38I GRGCYC 1 cut(s) 351
EgeI GGCGCC 1 cut(s) 484
EheI GGCGCC 1 cut(s) 484
ErhI CCWWGG 4 cut(s) 207, 360, 1236, 1345
FaeI CATG 3 cut(s) 817, 971, 1282
FaiI YATR 7 cut(s) 383, 448, 512, 777, 815, 969, 1280
FalI AAGNNNNNCTT 2 cut(s) 843, 875
FaqI GGGAC 2 cut(s) 756, 785
FatI CATG 3 cut(s) 813, 967, 1278
Fnu4HI GCNGC 2 cut(s) 378, 939
FokI GGATG 2 cut(s) 190, 561
FriOI GRGCYC 1 cut(s) 351
Fsp4HI GCNGC 2 cut(s) 378, 939
FspBI CTAG 3 cut(s) 161, 240, 987
GlaI GCGC 1 cut(s) 484
GluI GCNGC 2 cut(s) 378, 939
GsaI CCCAGC 1 cut(s) 845
GsuI CTGGAG 1 cut(s) 1200
HaeII RGCGCY 1 cut(s) 486
HapII CCGG 3 cut(s) 15, 320, 1007
HhaI GCGC 1 cut(s) 485
Hin1I GRCGYC 1 cut(s) 483
Hin1II CATG 3 cut(s) 817, 971, 1282
Hin6I GCGC 1 cut(s) 483
HinP1I GCGC 1 cut(s) 483
HindIII AAGCTT 1 cut(s) 122
HinfI GANTC 4 cut(s) 88, 155, 325, 425
HpaII CCGG 3 cut(s) 15, 320, 1007
HphI GGTGA 4 cut(s) 119, 288, 1006, 1225
Hpy166II GTNNAC 3 cut(s) 614, 1207, 1223
Hpy188III TCNNGA 6 cut(s) 161, 414, 439, 885, 1023, 1279
Hpy8I GTNNAC 3 cut(s) 614, 1207, 1223
HpyAV CCTTC 4 cut(s) 420, 742, 813, 987
HpyCH4III ACNGT 6 cut(s) 280, 390, 712, 727, 1033, 1175
HpyCH4IV ACGT 1 cut(s) 443
HpyCH4V TGCA 6 cut(s) 79, 455, 676, 699, 967, 1118
HpyF10VI GCNNNNNNNGC 2 cut(s) 291, 571
HpyF3I CTNAG 1 cut(s) 831
HpySE526I ACGT 1 cut(s) 443
Hsp92I GRCGYC 1 cut(s) 483
Hsp92II CATG 3 cut(s) 817, 971, 1282
HspAI GCGC 1 cut(s) 483
KasI GGCGCC 1 cut(s) 482
Kzo9I GATC 4 cut(s) 115, 217, 435, 1351
LmnI GCTCC 3 cut(s) 562, 663, 1268
Lsp1109I GCAGC 2 cut(s) 364, 950
LweI GCATC 4 cut(s) 88, 374, 583, 1097
MaeI CTAG 3 cut(s) 161, 240, 987
MaeII ACGT 1 cut(s) 443
MaeIII GTNAC 2 cut(s) 473, 816
MalI GATC 4 cut(s) 117, 219, 437, 1353
MbiI CCGCTC 1 cut(s) 1038
MboI GATC 4 cut(s) 115, 217, 435, 1351
MboII GAAGA 9 cut(s) 3, 176, 509, 548, 612, 859, 972, 1090, 1093
MhlI GDGCHC 2 cut(s) 351, 668
MluCI AATT 8 cut(s) 27, 51, 273, 310, 398, 550, 655, 1319
Mly113I GGCGCC 1 cut(s) 483
MlyI GAGTC 1 cut(s) 319
MmeI TCCRAC 1 cut(s) 831
Mph1103I ATGCAT 1 cut(s) 81
MseI TTAA 8 cut(s) 174, 248, 263, 341, 704, 861, 1073, 1170
MslI CAYNNNNRTG 1 cut(s) 671
MspI CCGG 3 cut(s) 15, 320, 1007
MspR9I CCNGG 5 cut(s) 93, 300, 948, 1218, 1227
Mva1269I GAATGC 1 cut(s) 81
MvaI CCWGG 5 cut(s) 93, 300, 948, 1218, 1227
MwoI GCNNNNNNNGC 2 cut(s) 291, 571
NarI GGCGCC 1 cut(s) 483
NdeII GATC 4 cut(s) 115, 217, 435, 1351
NlaIII CATG 3 cut(s) 817, 971, 1282
NlaIV GGNNCC 2 cut(s) 484, 531
NmuCI GTSAC 1 cut(s) 473
NsiI ATGCAT 1 cut(s) 81
NspI RCATGY 1 cut(s) 971
OliI CACNNNNGTG 1 cut(s) 671
PagI TCATGA 1 cut(s) 1278
PctI GAATGC 1 cut(s) 81
PfeI GAWTC 3 cut(s) 88, 155, 425
PflMI CCANNNNNTGG 1 cut(s) 305
PfoI TCCNGGA 1 cut(s) 91
PkrI GCNGC 2 cut(s) 379, 940
PleI GAGTC 1 cut(s) 319
PluTI GGCGCC 1 cut(s) 486
PpsI GAGTC 1 cut(s) 319
PshBI ATTAAT 1 cut(s) 174
Psp124BI GAGCTC 1 cut(s) 351
Psp6I CCWGG 5 cut(s) 91, 298, 946, 1216, 1225
PspFI CCCAGC 1 cut(s) 841
PspGI CCWGG 5 cut(s) 91, 298, 946, 1216, 1225
PspN4I GGNNCC 2 cut(s) 484, 531
RsaI GTAC 4 cut(s) 19, 688, 975, 1208
RsaNI GTAC 4 cut(s) 18, 687, 974, 1207
RseI CAYNNNNRTG 1 cut(s) 671
SacI GAGCTC 1 cut(s) 351
SaqAI TTAA 8 cut(s) 174, 248, 263, 341, 704, 861, 1073, 1170
SatI GCNGC 2 cut(s) 378, 939
Sau3AI GATC 4 cut(s) 115, 217, 435, 1351
ScaI AGTACT 1 cut(s) 688
SchI GAGTC 1 cut(s) 319
ScrFI CCNGG 5 cut(s) 93, 300, 948, 1218, 1227
SduI GDGCHC 2 cut(s) 351, 668
SfaNI GCATC 4 cut(s) 88, 374, 583, 1097
SfoI GGCGCC 1 cut(s) 484
SmiMI CAYNNNNRTG 1 cut(s) 671
SmlI CTYRAG 2 cut(s) 490, 1195
SmoI CTYRAG 2 cut(s) 490, 1195
Sse9I AATT 8 cut(s) 27, 51, 273, 310, 398, 550, 655, 1319
SsiI CCGC 1 cut(s) 1036
SspDI GGCGCC 1 cut(s) 482
SspI AATATT 1 cut(s) 65
SspMI CTAG 3 cut(s) 161, 240, 987
SstI GAGCTC 1 cut(s) 351
StyD4I CCNGG 5 cut(s) 91, 298, 946, 1216, 1225
StyI CCWWGG 4 cut(s) 207, 360, 1236, 1345
TaaI ACNGT 6 cut(s) 280, 390, 712, 727, 1033, 1175
TaiI ACGT 1 cut(s) 446
TaqI TCGA 3 cut(s) 82, 628, 1354
TasI AATT 8 cut(s) 27, 51, 273, 310, 398, 550, 655, 1319
TatI WGTACW 2 cut(s) 686, 1206
TfiI GAWTC 3 cut(s) 88, 155, 425
Tru1I TTAA 8 cut(s) 174, 248, 263, 341, 704, 861, 1073, 1170
Tru9I TTAA 8 cut(s) 174, 248, 263, 341, 704, 861, 1073, 1170
TscAI CASTG 1 cut(s) 285
TseFI GTSAC 1 cut(s) 473
TseI GCWGC 2 cut(s) 377, 938
Tsp45I GTSAC 1 cut(s) 473
TspDTI ATGAA 5 cut(s) 398, 608, 696, 972, 1295
TspGWI ACGGA 2 cut(s) 87, 835
TspRI CASTG 1 cut(s) 285
Van91I CCANNNNNTGG 1 cut(s) 305
VspI ATTAAT 1 cut(s) 174
XapI RAATTY 3 cut(s) 310, 550, 1319
XbaI TCTAGA 1 cut(s) 160
XceI RCATGY 1 cut(s) 971
XcmI CCANNNNNNNNNTGG 1 cut(s) 643
XspI CTAG 3 cut(s) 161, 240, 987
ZrmI AGTACT 1 cut(s) 688
Zsp2I ATGCAT 1 cut(s) 81
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.