Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0007140

Physical Location & Seq

Genomic Coordinates Reverse (-)

19960789 .. 19963980

Gene Structure 3192 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G53920.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1716 bp

ATGGCTTCCTTCAATTCGTTCCCCATTCCCAAACAGATTGTTGGTTCTTCTTCTTCGTCGTCCTCCTCTACTTCTCGGCCACGTATTTTAGTGCGATCGAGTTTAACATCGTCTATGACCTCTACCAATAGTATGCTGGTCTTTGTACATCCTCATCCTTTGATTAAACATTGGCTCTCGTTATTGAGATCTGACCAAACTTCTTTCCCCATTTTCGTTAGAATTCCAATGACTTCTGTGGTTGCAACGAGGTGGTCGTTTCTATCCTCAGTCAAAGAGGAAAGCAGAATTTATCAGAACGATTCTCTAAAAGCATGTGGCTGCGCATCTGTATCTCCTTACACTGCACAAAATAATGTTTATGTTGAGCTCAAAGACCCAAAGGAAAATATTGGCGTGGGTTCTGCAGAAAGATCATATTCATCTCGTAGCATGTTGCAATACAATTTACTGGCAAAGAACCTTTTGGCACTAGAGGAAACGTTTGTTGCCTTGGATTCTGTAAGAATGGAAAGAGATATTATGTTGCAAATGGGGAAGTTGGGGGCTGCTGAGTTATTTAAAACCTGTCTATCTAGGTATCGTGGTTCCTCAATCACGTCGTGCTTATCTGACACAACTGAGTTGGTGGATACTACGCCGAATCAACAAGTCTTTGTATCCTCGAGGAGAAAAGTAAAAAAGAAAGCAAGGAGGTCGAGTGTGACAGCTGAGAATGGTGATCAGAGTTCTCTGCCAATCGGTTTAAGAACTACATGGAACAATATTGATGTCCCTAGAGTGAGAAGACCACCAAAATATAGAAAGAAAAGAGAGAGGATCTCTAGAAACGAGACTGAGATGTCAACAGGAGTCAAGATAGTGGCGGACATGGAGAGAATCAGAACACAACTGGAGGAAGAAAGTGGTAAGGTAGCGAGTTTGAGTTGTTGGGCTGCAGCAGCTGGGATGAACGAGAAACTCCTGATGCGCAATCTACATTACGGTTGGTACTGTAGAGATGAACTGGTGAAAAGCACCCGGTCTTTGGTTCTCTTCCTCGCAAGAAATTACCGTGGACTGGGAATCGCCCACGAAGATTTAATTCAGGCAGGGTATGTGGGGGTGTTACAAGGAGCAGAGAGGTTTGATCACACAAGGGGTTACAAGTTTTCAACATATGTGCAGTATTGGATAAGAAAATCAATGTCTACGATGGTGTCACGGCATGCAAGAGGCGTCCATATTCCTTCATCAATAATCCGAACTATCAATCATATACAAAAGGCTCGTAAGACCCTGAAAACGAGCCATGGTATAAAATATGCGGCTGATGAGGAGATTGCAAAACTAACAGGCCACTCGGTGAAGAAGATTCGAGCAGCTAACCAATGCCTAAAAGTGGTCGGTTCAATTGACAAGAAAGTTGGGGATTGCTTTACTACAAAATTCCTGGAATTTACACCAGACACAACGATGGAGAGTCCTGAGGAGGCCGTGATGAGGCAGAGCGCGAGGAGAGACATACATGATCTTCTAGAAGGGTTAGAGCCAAGAGAGAAGCAAGTGATGGTCCTACGTTATGGTCTTCAAGACTACAGGCCCAAGTCCCTGGAAGAGATTGGGAAGCTTCTTAAAGTTAGCAAAGAATGGATTCGGAAGATCGAACGGAGAGCAATGGCTAAACTCAGAGACCAACCCAACGCCGAAGACCTCAGATATTATTTGAATCAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000988 GO:0000990 GO:0003674 GO:0003824 GO:0003899 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006351 GO:0006352 GO:0006355 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009416 GO:0009507 GO:0009536 GO:0009628 GO:0009889 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0016070 GO:0016740 GO:0016772 GO:0016779 GO:0016987 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031326 GO:0032774 GO:0034062 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043254 GO:0044087 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051171 GO:0051252 GO:0051716 GO:0060255 GO:0065007 GO:0071214 GO:0071478 GO:0071482 GO:0071704 GO:0080090 GO:0090304 GO:0097659 GO:0097747 GO:0104004 GO:0140098 GO:0140110 GO:1901360 GO:1901362 GO:1901576 GO:1903506 GO:2000112 GO:2000142 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sigma70_r2 Sigma70_r3 Sigma70_r4

Protein Analysis

571

Amino Acids

64.9

Weight (kDa)

9.85

Isoelectric Point (pI)

47.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sigma70_r2	PF04542	336 - 405	6.6e-15	Sigma-70 region 2
Sigma70_r3	PF04539	416 - 492	4.2e-07	Sigma-70 region 3
Sigma70_r4	PF04545	505 - 557	2.2e-16	Sigma-70, region 4

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007140)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G53920 AT3G53920
fragaria_vesca	FvH4_2g35110 FvH4_2g35110 FvH4_2g35110
malus_domestica	MD08G1108600.v1.1 MD15G1089100.v1.1
prunus_persica	Prupe.1G443200_v2.0.a1 Prupe.1G443200_v2.0.a1 Prupe.1G443200_v2.0.a1
pyrus_communis	pycom08g09050 pycom15g08350
rosa_chinensis	RchiOBHm_Chr6g0306861
rosa_laevigata	RLG00000010760
rosa_multiflora	Rmu_sc0009381.1_g000005
rosa_roxburghii	Rroxscaffold_7G00161410
rosa_rugosa	Rorug06G0353600 Rorug06G0353700 Rorug06G0353800 Rorug06G0353900
rosa_samantha	Rh6AG465400 Rh6BG435400 Rh6CG479800 Rh6DG466800
rosa_wichuraiana	Rw6G040560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	841
AbsI	CCTCGAGG	1 cut(s)	664
Acc16I	TGCGCA	2 cut(s)	325, 971
AccI	GTMKAC	1 cut(s)	1190
AccII	CGCG	1 cut(s)	1493
AciI	CCGC	2 cut(s)	866, 1307
AclI	AACGTT	1 cut(s)	482
AclWI	GGATC	1 cut(s)	827
AcoI	YGGCCR	1 cut(s)	77
AcsI	RAATTY	4 cut(s)	222, 288, 1427, 1436
AcyI	GRCGYC	1 cut(s)	1218
AdeI	CACNNNGTG	2 cut(s)	603, 1345
AfaI	GTAC	2 cut(s)	147, 992
AfiI	CCNNNNNNNGG	4 cut(s)	1027, 1060, 1381, 1482
AgsI	TTSAA	5 cut(s)	13, 1155, 1392, 1571, 1708
AjiI	CACGTC	1 cut(s)	600
AjnI	CCWGG	2 cut(s)	1431, 1590
AluBI	AGCT	5 cut(s)	370, 710, 944, 1364, 1609
AluI	AGCT	5 cut(s)	370, 710, 944, 1364, 1609
Alw21I	GWGCWC	1 cut(s)	372
Alw26I	GTCTC	3 cut(s)	827, 1494, 1665
AlwI	GGATC	1 cut(s)	827
AlwNI	CAGNNNCTG	1 cut(s)	944
Ama87I	CYCGRG	1 cut(s)	664
AoxI	GGCC	4 cut(s)	77, 1336, 1473, 1580
ApeKI	GCWGC	6 cut(s)	321, 548, 935, 938, 941, 1361
ApoI	RAATTY	4 cut(s)	222, 288, 1427, 1436
Asp700I	GAANNNNTTC	1 cut(s)	1632
AspLEI	GCGC	3 cut(s)	326, 972, 1493
AspS9I	GGNCC	2 cut(s)	1552, 1581
AsuC2I	CCSGG	1 cut(s)	1021
AsuHPI	GGTGA	3 cut(s)	731, 1021, 1357
AvaI	CYCGRG	1 cut(s)	664
AvaII	GGWCC	1 cut(s)	1552
AxyI	CCTNAGG	1 cut(s)	1467
BanII	GRGCYC	1 cut(s)	372
BbsI	GAAGAC	3 cut(s)	793, 1559, 1695
Bbv12I	GWGCWC	1 cut(s)	372
BbvI	GCAGC	6 cut(s)	308, 535, 922, 950, 953, 1373
BccI	CCATC	3 cut(s)	1189, 1450, 1543
BceAI	ACGGC	2 cut(s)	1220, 1460
BcgI	CGANNNNNNTGC	2 cut(s)	678, 712
BciT130I	CCWGG	2 cut(s)	1433, 1592
BciVI	GTATCC	2 cut(s)	625, 670
BclI	TGATCA	2 cut(s)	721, 1129
BcnI	CCSGG	1 cut(s)	1021
BcoDI	GTCTC	3 cut(s)	827, 1494, 1665
BfaI	CTAG	5 cut(s)	473, 576, 777, 825, 1517
BfmI	CTRYAG	4 cut(s)	405, 936, 994, 1576
BfuI	GTATCC	2 cut(s)	625, 670
BglII	AGATCT	1 cut(s)	188
BisI	GCNGC	7 cut(s)	322, 549, 936, 939, 942, 1308, 1362
BlsI	GCNGC	7 cut(s)	323, 550, 937, 940, 943, 1309, 1363
Bme1390I	CCNGG	3 cut(s)	1021, 1433, 1592
Bme18I	GGWCC	1 cut(s)	1552
BmeT110I	CYCGRG	1 cut(s)	664
BmgBI	CACGTC	1 cut(s)	600
BmgT120I	GGNCC	2 cut(s)	1552, 1581
BmiI	GGNNCC	1 cut(s)	589
BmrFI	CCNGG	3 cut(s)	1021, 1433, 1592
BmrI	ACTGGG	1 cut(s)	1070
BmsI	GCATC	2 cut(s)	335, 957
BmuI	ACTGGG	1 cut(s)	1070
BpiI	GAAGAC	3 cut(s)	793, 1559, 1695
BplI	GAGNNNNNCTC	2 cut(s)	806, 838
BpmI	CTGGAG	1 cut(s)	914
BpuMI	CCSGG	1 cut(s)	1021
BsaAI	YACGTR	1 cut(s)	83
BsaHI	GRCGYC	1 cut(s)	1218
BsaI	GGTCTC	1 cut(s)	1665
BsaJI	CCNNGG	4 cut(s)	492, 1054, 1291, 1590
BsaXI	ACNNNNNCTCC	2 cut(s)	685, 715
Bsc4I	CCNNNNNNNGG	4 cut(s)	1027, 1060, 1381, 1482
Bse1I	ACTGG	4 cut(s)	456, 897, 1011, 1065
Bse21I	CCTNAGG	1 cut(s)	1467
Bse3DI	GCAATG	1 cut(s)	1662
BseBI	CCWGG	2 cut(s)	1433, 1592
BseDI	CCNNGG	4 cut(s)	492, 1054, 1291, 1590
BseGI	GGATG	3 cut(s)	148, 154, 954
BseLI	CCNNNNNNNGG	4 cut(s)	1027, 1060, 1381, 1482
BseMI	GCAATG	1 cut(s)	1662
BseMII	CTCAG	8 cut(s)	282, 543, 612, 702, 828, 1458, 1681, 1708
BseNI	ACTGG	4 cut(s)	456, 897, 1011, 1065
BseRI	GAGGAG	5 cut(s)	55, 682, 1331, 1484, 1510
BseXI	GCAGC	6 cut(s)	308, 535, 922, 950, 953, 1373
BseYI	CCCAGC	1 cut(s)	944
BsgI	GTGCAG	2 cut(s)	330, 1184
Bsh1236I	CGCG	1 cut(s)	1493
Bsh1285I	CGRYCG	1 cut(s)	98
BshFI	GGCC	4 cut(s)	79, 1338, 1475, 1582
BsiEI	CGRYCG	1 cut(s)	98
BsiHKAI	GWGCWC	1 cut(s)	372
BsiHKCI	CYCGRG	1 cut(s)	664
BsiSI	CCGG	1 cut(s)	1021
BslFI	GGGAC	2 cut(s)	758, 1573
BslI	CCNNNNNNNGG	4 cut(s)	1027, 1060, 1381, 1482
BsmAI	GTCTC	3 cut(s)	827, 1494, 1665
BsmFI	GGGAC	2 cut(s)	758, 1573
BsnI	GGCC	4 cut(s)	79, 1338, 1475, 1582
Bso31I	GGTCTC	1 cut(s)	1665
BsoBI	CYCGRG	1 cut(s)	664
Bsp1286I	GDGCHC	1 cut(s)	372
Bsp1407I	TGTACA	1 cut(s)	145
Bsp143I	GATC	8 cut(s)	95, 188, 413, 721, 819, 1129, 1510, 1641
Bsp19I	CCATGG	1 cut(s)	1291
BspACI	CCGC	2 cut(s)	866, 1307
BspANI	GGCC	4 cut(s)	79, 1338, 1475, 1582
BspCNI	CTCAG	8 cut(s)	281, 544, 613, 703, 829, 1459, 1680, 1707
BspFNI	CGCG	1 cut(s)	1493
BspLI	GGNNCC	1 cut(s)	589
BspMAI	CTGCAG	2 cut(s)	409, 940
BspPI	GGATC	1 cut(s)	827
BspTNI	GGTCTC	1 cut(s)	1665
BsrDI	GCAATG	1 cut(s)	1662
BsrGI	TGTACA	1 cut(s)	145
BsrI	ACTGG	4 cut(s)	456, 897, 1011, 1065
BssECI	CCNNGG	4 cut(s)	492, 1054, 1291, 1590
BssMI	GATC	8 cut(s)	95, 188, 413, 721, 819, 1129, 1510, 1641
BssNI	GRCGYC	1 cut(s)	1218
BssT1I	CCWWGG	2 cut(s)	492, 1291
Bst2UI	CCWGG	2 cut(s)	1433, 1592
Bst4CI	ACNGT	3 cut(s)	986, 995, 1055
Bst6I	CTCTTC	2 cut(s)	1040, 1590
BstACI	GRCGYC	1 cut(s)	1218
BstAUI	TGTACA	1 cut(s)	145
BstBAI	YACGTR	1 cut(s)	83
BstC8I	GCNNGC	1 cut(s)	1209
BstDEI	CTNAG	8 cut(s)	268, 552, 621, 711, 837, 1467, 1667, 1694
BstDSI	CCRYGG	2 cut(s)	1054, 1291
BstF5I	GGATG	3 cut(s)	148, 154, 954
BstFNI	CGCG	1 cut(s)	1493
BstHHI	GCGC	3 cut(s)	326, 972, 1493
BstKTI	GATC	8 cut(s)	98, 191, 416, 724, 822, 1132, 1513, 1644
BstMAI	GTCTC	3 cut(s)	827, 1494, 1665
BstMBI	GATC	8 cut(s)	95, 188, 413, 721, 819, 1129, 1510, 1641
BstMCI	CGRYCG	1 cut(s)	98
BstMWI	GCNNNNNNNGC	1 cut(s)	941
BstNI	CCWGG	2 cut(s)	1433, 1592
BstNSI	RCATGY	3 cut(s)	318, 436, 1211
BstSCI	CCNGG	3 cut(s)	1019, 1431, 1590
BstSFI	CTRYAG	4 cut(s)	405, 936, 994, 1576
BstUI	CGCG	1 cut(s)	1493
BstV1I	GCAGC	6 cut(s)	308, 535, 922, 950, 953, 1373
BstV2I	GAAGAC	3 cut(s)	793, 1559, 1695
BstX2I	RGATCY	2 cut(s)	188, 819
BstXI	CCANNNNNNTGG	1 cut(s)	1591
BstYI	RGATCY	2 cut(s)	188, 819
Bsu36I	CCTNAGG	1 cut(s)	1467
BsuI	GTATCC	2 cut(s)	625, 670
BsuRI	GGCC	4 cut(s)	79, 1338, 1475, 1582
BtgI	CCRYGG	2 cut(s)	1054, 1291
BtrI	CACGTC	1 cut(s)	600
BtsCI	GGATG	3 cut(s)	148, 154, 954
BtsI	GCAGTG	1 cut(s)	342
BtsIMutI	CAGTG	1 cut(s)	342
Cac8I	GCNNGC	1 cut(s)	1209
CaiI	CAGNNNCTG	1 cut(s)	944
CfoI	GCGC	3 cut(s)	326, 972, 1493
Cfr13I	GGNCC	2 cut(s)	1552, 1581
CseI	GACGC	1 cut(s)	1207
Csp6I	GTAC	2 cut(s)	146, 991
CviAII	CATG	7 cut(s)	315, 433, 756, 871, 1208, 1292, 1508
CviQI	GTAC	2 cut(s)	146, 991
DdeI	CTNAG	8 cut(s)	268, 552, 621, 711, 837, 1467, 1667, 1694
DpnI	GATC	8 cut(s)	97, 190, 415, 723, 821, 1131, 1512, 1643
DpnII	GATC	8 cut(s)	95, 188, 413, 721, 819, 1129, 1510, 1641
DraI	TTTAAA	1 cut(s)	562
DraIII	CACNNNGTG	2 cut(s)	603, 1345
DrdI	GACNNNNNNGTC	1 cut(s)	841
DseDI	GACNNNNNNGTC	1 cut(s)	841
EaeI	YGGCCR	1 cut(s)	77
Eam1104I	CTCTTC	2 cut(s)	1040, 1590
EarI	CTCTTC	2 cut(s)	1040, 1590
EciI	GGCGGA	1 cut(s)	881
Ecl136II	GAGCTC	1 cut(s)	370
Eco130I	CCWWGG	2 cut(s)	492, 1291
Eco24I	GRGCYC	1 cut(s)	372
Eco31I	GGTCTC	1 cut(s)	1665
Eco47I	GGWCC	1 cut(s)	1552
Eco53kI	GAGCTC	1 cut(s)	370
Eco81I	CCTNAGG	1 cut(s)	1467
Eco88I	CYCGRG	1 cut(s)	664
EcoICRI	GAGCTC	1 cut(s)	370
EcoRI	GAATTC	1 cut(s)	222
EcoRII	CCWGG	2 cut(s)	1431, 1590
EcoT14I	CCWWGG	2 cut(s)	492, 1291
EcoT38I	GRGCYC	1 cut(s)	372
ErhI	CCWWGG	2 cut(s)	492, 1291
FaeI	CATG	7 cut(s)	318, 436, 759, 874, 1211, 1295, 1511
FaqI	GGGAC	2 cut(s)	758, 1573
FatI	CATG	7 cut(s)	314, 432, 755, 870, 1207, 1291, 1507
FauNDI	CATATG	1 cut(s)	1159
FbaI	TGATCA	2 cut(s)	721, 1129
FblI	GTMKAC	1 cut(s)	1190
Fnu4HI	GCNGC	7 cut(s)	322, 549, 936, 939, 942, 1308, 1362
FokI	GGATG	3 cut(s)	135, 141, 961
FriOI	GRGCYC	1 cut(s)	372
Fsp4HI	GCNGC	7 cut(s)	322, 549, 936, 939, 942, 1308, 1362
FspBI	CTAG	5 cut(s)	473, 576, 777, 825, 1517
FspI	TGCGCA	2 cut(s)	325, 971
GlaI	GCGC	3 cut(s)	325, 971, 1492
GluI	GCNGC	7 cut(s)	322, 549, 936, 939, 942, 1308, 1362
GsaI	CCCAGC	1 cut(s)	948
GsuI	CTGGAG	1 cut(s)	914
HaeIII	GGCC	4 cut(s)	79, 1338, 1475, 1582
HapII	CCGG	1 cut(s)	1021
HgaI	GACGC	1 cut(s)	1207
HhaI	GCGC	3 cut(s)	326, 972, 1493
Hin1I	GRCGYC	1 cut(s)	1218
Hin1II	CATG	7 cut(s)	318, 436, 759, 874, 1211, 1295, 1511
Hin6I	GCGC	3 cut(s)	324, 970, 1491
HinP1I	GCGC	3 cut(s)	324, 970, 1491
HincII	GTYRAC	1 cut(s)	846
HindII	GTYRAC	1 cut(s)	846
HindIII	AAGCTT	1 cut(s)	1607
HpaII	CCGG	1 cut(s)	1021
HphI	GGTGA	3 cut(s)	731, 1021, 1357
Hpy166II	GTNNAC	3 cut(s)	846, 1058, 1191
Hpy188I	TCNGA	9 cut(s)	193, 297, 613, 726, 884, 1244, 1638, 1670, 1697
Hpy188III	TCNNGA	6 cut(s)	825, 856, 964, 1466, 1517, 1571
Hpy8I	GTNNAC	3 cut(s)	846, 1058, 1191
Hpy99I	CGWCG	2 cut(s)	61, 604
HpyAV	CCTTC	3 cut(s)	19, 1239, 1514
HpyCH4III	ACNGT	3 cut(s)	986, 995, 1055
HpyCH4IV	ACGT	4 cut(s)	82, 482, 599, 1558
HpyCH4V	TGCA	9 cut(s)	245, 347, 407, 439, 529, 938, 1165, 1211, 1325
HpyF10VI	GCNNNNNNNGC	1 cut(s)	941
HpyF3I	CTNAG	8 cut(s)	268, 552, 621, 711, 837, 1467, 1667, 1694
HpySE526I	ACGT	4 cut(s)	82, 482, 599, 1558
Hsp92I	GRCGYC	1 cut(s)	1218
Hsp92II	CATG	7 cut(s)	318, 436, 759, 874, 1211, 1295, 1511
HspAI	GCGC	3 cut(s)	324, 970, 1491
Ksp22I	TGATCA	2 cut(s)	721, 1129
Kzo9I	GATC	8 cut(s)	95, 188, 413, 721, 819, 1129, 1510, 1641
LmnI	GCTCC	1 cut(s)	1115
Lsp1109I	GCAGC	6 cut(s)	308, 535, 922, 950, 953, 1373
LweI	GCATC	2 cut(s)	335, 957
MaeI	CTAG	5 cut(s)	473, 576, 777, 825, 1517
MaeII	ACGT	4 cut(s)	82, 482, 599, 1558
MaeIII	GTNAC	4 cut(s)	703, 1107, 1142, 1200
MalI	GATC	8 cut(s)	97, 190, 415, 723, 821, 1131, 1512, 1643
MboI	GATC	8 cut(s)	95, 188, 413, 721, 819, 1129, 1510, 1641
MfeI	CAATTG	1 cut(s)	1392
MflI	RGATCY	2 cut(s)	188, 819
MhlI	GDGCHC	1 cut(s)	372
MluCI	AATT	9 cut(s)	13, 222, 288, 445, 1048, 1083, 1392, 1427, 1436
MlyI	GAGTC	2 cut(s)	861, 1471
MroXI	GAANNNNTTC	1 cut(s)	1632
MseI	TTAA	6 cut(s)	104, 165, 561, 746, 1082, 1614
MslI	CAYNNNNRTG	1 cut(s)	1454
MspA1I	CMGCKG	2 cut(s)	710, 944
MspI	CCGG	1 cut(s)	1021
MspR9I	CCNGG	3 cut(s)	1021, 1433, 1592
MunI	CAATTG	1 cut(s)	1392
MvaI	CCWGG	2 cut(s)	1433, 1592
MvnI	CGCG	1 cut(s)	1493
MwoI	GCNNNNNNNGC	1 cut(s)	941
NciI	CCSGG	1 cut(s)	1021
NcoI	CCATGG	1 cut(s)	1291
NdeI	CATATG	1 cut(s)	1159
NdeII	GATC	8 cut(s)	95, 188, 413, 721, 819, 1129, 1510, 1641
NlaIII	CATG	7 cut(s)	318, 436, 759, 874, 1211, 1295, 1511
NlaIV	GGNNCC	1 cut(s)	589
NmeAIII	GCCGAG	1 cut(s)	55
NmuCI	GTSAC	2 cut(s)	703, 1200
NsbI	TGCGCA	2 cut(s)	325, 971
NspI	RCATGY	3 cut(s)	318, 436, 1211
PaeI	GCATGC	1 cut(s)	1211
PaeR7I	CTCGAG	1 cut(s)	664
PcsI	WCGNNNNNNNCGW	1 cut(s)	254
PdmI	GAANNNNTTC	1 cut(s)	1632
PfeI	GAWTC	8 cut(s)	302, 497, 643, 879, 1065, 1354, 1633, 1708
PfoI	TCCNGGA	1 cut(s)	1431
PkrI	GCNGC	7 cut(s)	323, 550, 937, 940, 943, 1309, 1363
Ple19I	CGATCG	1 cut(s)	98
PleI	GAGTC	2 cut(s)	860, 1470
PpsI	GAGTC	2 cut(s)	860, 1470
Ppu21I	YACGTR	1 cut(s)	83
Psp124BI	GAGCTC	1 cut(s)	372
Psp1406I	AACGTT	1 cut(s)	482
Psp6I	CCWGG	2 cut(s)	1431, 1590
PspFI	CCCAGC	1 cut(s)	944
PspGI	CCWGG	2 cut(s)	1431, 1590
PspN4I	GGNNCC	1 cut(s)	589
PspPI	GGNCC	2 cut(s)	1552, 1581
PspXI	VCTCGAGB	1 cut(s)	664
PstI	CTGCAG	2 cut(s)	409, 940
PstNI	CAGNNNCTG	1 cut(s)	944
PsuI	RGATCY	2 cut(s)	188, 819
PvuI	CGATCG	1 cut(s)	98
PvuII	CAGCTG	2 cut(s)	710, 944
RsaI	GTAC	2 cut(s)	147, 992
RsaNI	GTAC	2 cut(s)	146, 991
RseI	CAYNNNNRTG	1 cut(s)	1454
SacI	GAGCTC	1 cut(s)	372
SaqAI	TTAA	6 cut(s)	104, 165, 561, 746, 1082, 1614
SatI	GCNGC	7 cut(s)	322, 549, 936, 939, 942, 1308, 1362
Sau3AI	GATC	8 cut(s)	95, 188, 413, 721, 819, 1129, 1510, 1641
Sau96I	GGNCC	2 cut(s)	1552, 1581
SchI	GAGTC	2 cut(s)	861, 1471
ScrFI	CCNGG	3 cut(s)	1021, 1433, 1592
SduI	GDGCHC	1 cut(s)	372
SfaNI	GCATC	2 cut(s)	335, 957
SfcI	CTRYAG	4 cut(s)	405, 936, 994, 1576
Sfr274I	CTCGAG	1 cut(s)	664
SinI	GGWCC	1 cut(s)	1552
SlaI	CTCGAG	1 cut(s)	664
SmiMI	CAYNNNNRTG	1 cut(s)	1454
SmlI	CTYRAG	1 cut(s)	664
SmoI	CTYRAG	1 cut(s)	664
SphI	GCATGC	1 cut(s)	1211
Sse9I	AATT	9 cut(s)	13, 222, 288, 445, 1048, 1083, 1392, 1427, 1436
SsiI	CCGC	2 cut(s)	866, 1307
SspI	AATATT	2 cut(s)	391, 766
SspMI	CTAG	5 cut(s)	473, 576, 777, 825, 1517
SstI	GAGCTC	1 cut(s)	372
StyD4I	CCNGG	3 cut(s)	1019, 1431, 1590
StyI	CCWWGG	2 cut(s)	492, 1291
TaaI	ACNGT	3 cut(s)	986, 995, 1055
TaiI	ACGT	4 cut(s)	85, 485, 602, 1561
TaqI	TCGA	5 cut(s)	98, 665, 698, 1357, 1644
TasI	AATT	9 cut(s)	13, 222, 288, 445, 1048, 1083, 1392, 1427, 1436
TatI	WGTACW	1 cut(s)	145
TauI	GCSGC	1 cut(s)	1310
TfiI	GAWTC	8 cut(s)	302, 497, 643, 879, 1065, 1354, 1633, 1708
Tru1I	TTAA	6 cut(s)	104, 165, 561, 746, 1082, 1614
Tru9I	TTAA	6 cut(s)	104, 165, 561, 746, 1082, 1614
TscAI	CASTG	1 cut(s)	349
TseFI	GTSAC	2 cut(s)	703, 1200
TseI	GCWGC	6 cut(s)	321, 548, 935, 938, 941, 1361
Tsp45I	GTSAC	2 cut(s)	703, 1200
TspDTI	ATGAA	4 cut(s)	411, 965, 1017, 1221
TspGWI	ACGGA	1 cut(s)	1663
TspRI	CASTG	1 cut(s)	349
VpaK11BI	GGWCC	1 cut(s)	1552
XapI	RAATTY	4 cut(s)	222, 288, 1427, 1436
XbaI	TCTAGA	2 cut(s)	824, 1516
XceI	RCATGY	3 cut(s)	318, 436, 1211
XcmI	CCANNNNNNNNNTGG	1 cut(s)	133
XhoI	CTCGAG	1 cut(s)	664
XmiI	GTMKAC	1 cut(s)	1190
XmnI	GAANNNNTTC	1 cut(s)	1632
XspI	CTAG	5 cut(s)	473, 576, 777, 825, 1517

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.