Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0007140

Physical Location & Seq

Genomic Coordinates Forward (+)

5234492 .. 5237478

Gene Structure 2987 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom15g08350.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1671 bp

ATGGGTTTTGGTTTTAGGCTCAACCTCCTCAAGTCTGGCTTTCCACTTCATCACTCTCACTGGCAAGCTGCTGGTTCTCCTTCCAAGCTCTCTTTTACTTCTGTTAGAGGCAGGGAGGGCTCTTTCAACTCGGCAAGGCTGTTATTCCTGTCCATTATTTCTGAGGAAGGCGAGATTTCCGGTAAAGATACTCTGAAGGTGTACTCTTGTTCATCTGCTTCACCGCAGATCTTAGAGGATGGCGTCTCTGAAATGGAACAGATAAGCTTTAGGAGTAGTTCGTCCAACACGACTGGGAATAACCAGATGCCTGTTGCAGACGGAAACTTTAGACCTGTTAATGCCTTAGAATCTTGCAGTGCAGCTCATTTTTGTTTGTTACTGAAAAATCTTGATGCTCTGGAGGAGACTTTTGCTAATTCAGATGTGTTAAAGTTGGAAAAAGAGATACTTTTACAATTAGGAAGGCTTGGAGCTCTACAGTTATTTGATGCCTGTCTGTCAAGAACTCTTACATCCTCAAGCTTTTTTGATTTGTCTGACATACCTAGTGTACAGATTGAAGGGCATAAGATGGATAAGAAAGTAGATAACGATAGAGGCAAGATTATTGTACGTTCTGGGAAAAAGAAGGAAAGAAGATCAAGAAAAAGAGCATTAGATAATGTCAGAGTTTCTTCTGGCTCATTGCCTCCTAAATCAACTTGGGAAGGTTCCAAACATCCTACTGCTTCATCAGCGAAAAGAGCATCAAAGTATCGAAAGTGTAGACTTACAATAGCTAAAAATGAGGGAGAAATGTCAACCCGGGTTAAGGTGATCGCCAATTTGGAGAGAATTAAAACAACTTTGGAAAAGGAATCTGGCACAGTAGCTACCTTAAGTTGTTGGGCGGAAGCAGCAGGAGTTCGCGAGAAGGTGCTGTTACAGAAATTGCATTTTGGTTGGCACTGCCAGGATGAGCTTATAAGGAGCACTCGTTCTTTAGTTCTATACCTTGCTAGAAGCTATAGAGGGCTAGGAGTAGCCATGGATGATTTATTGCAGGCTGGAAACCAGGGTCTCCTGCAAGGTGCAGAAAGGTATGATCACTCGAGGGGTTACCGATTCTCAACCTATGTCCGATACTGGATAAAGAAATCAATGTCAAGATTGGTGGCACGGCATGCTAGGGAAATCCAAATTCCTTTCACGCTAAGCAAGGCAATAAATCAGATACAGAAAGCTCGCAAAGCCACTTACAACAGCCACATGAGATACCCAGACGATGATGAAATTGCAAAGATTACAGGTCTTTCGTTGGTGAGAATCAGATCAGCTAGCACATGTCTGAGAGTTGCCGGTTCGGTAAATGACAAGATGTGGGACAACTCTCCTGGGACTTTTATGGAATTTACACCGGACACATCAATAAAAAGCCCTGAAGAAACTGTCACGAGACAGCACATGAAAAAAGACATCCATGATCTGCTGAAATGCTTGGCCTCGAAGGAGAGGCAAGTGTTGGTGCTGCGATATGGGTTAAACAACTACGACCCCAAGTCACTTGAGGAGATTGGAAAGCTTTTCGATGTGAGCAAGGAGTGGATACGGAAGATAGAAAAGAAAGCTCTCACGAAGCTAAGGGACGATGAAACACACAGAAGTTTAAGCCATTACTTGAAAAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000988 GO:0000990 GO:0003674 GO:0003824 GO:0003899 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006351 GO:0006352 GO:0006355 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009416 GO:0009507 GO:0009536 GO:0009628 GO:0009889 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0016070 GO:0016740 GO:0016772 GO:0016779 GO:0016987 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031326 GO:0032774 GO:0034062 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043254 GO:0044087 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051171 GO:0051252 GO:0051716 GO:0060255 GO:0065007 GO:0071214 GO:0071478 GO:0071482 GO:0071704 GO:0080090 GO:0090304 GO:0097659 GO:0097747 GO:0104004 GO:0140098 GO:0140110 GO:1901360 GO:1901362 GO:1901576 GO:1903506 GO:2000112 GO:2000142 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sigma70_r2 Sigma70_r3 Sigma70_r4

Protein Analysis

557

Amino Acids

62.64

Weight (kDa)

9.63

Isoelectric Point (pI)

42.59

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007140)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G53920 AT3G53920
fragaria_vesca	FvH4_2g35110 FvH4_2g35110 FvH4_2g35110
malus_domestica	MD08G1108600.v1.1 MD15G1089100.v1.1
prunus_persica	Prupe.1G443200_v2.0.a1 Prupe.1G443200_v2.0.a1 Prupe.1G443200_v2.0.a1
pyrus_communis	pycom08g09050 pycom15g08350
rosa_chinensis	RchiOBHm_Chr6g0306861
rosa_laevigata	RLG00000010760
rosa_multiflora	Rmu_sc0009381.1_g000005
rosa_roxburghii	Rroxscaffold_7G00161410
rosa_rugosa	Rorug06G0353600 Rorug06G0353700 Rorug06G0353800 Rorug06G0353900
rosa_samantha	Rh6AG465400 Rh6BG435400 Rh6CG479800 Rh6DG466800
rosa_wichuraiana	Rw6G040560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	968
AccI	GTMKAC	1 cut(s)	769
AccII	CGCG	1 cut(s)	912
AciI	CCGC	2 cut(s)	224, 893
AcsI	RAATTY	2 cut(s)	1182, 1391
AcuI	CTGAAG	2 cut(s)	215, 1443
AcyI	GRCGYC	1 cut(s)	243
AfaI	GTAC	3 cut(s)	203, 555, 615
AfiI	CCNNNNNNNGG	1 cut(s)	814
AflII	CTTAAG	1 cut(s)	880
AflIII	ACRYGT	1 cut(s)	1325
AgsI	TTSAA	3 cut(s)	127, 563, 1663
AhdI	GACNNNNNGTC	1 cut(s)	1540
AjnI	CCWGG	3 cut(s)	954, 1056, 1375
AloI	GAACNNNNNNTCC	2 cut(s)	964, 996
Alw21I	GWGCWC	2 cut(s)	478, 977
Alw26I	GTCTC	4 cut(s)	250, 401, 1067, 1432
Ama87I	CYCGRG	2 cut(s)	807, 1093
AoxI	GGCC	1 cut(s)	1482
ApeKI	GCWGC	4 cut(s)	68, 362, 899, 1510
ApoI	RAATTY	2 cut(s)	1182, 1391
AsuC2I	CCSGG	2 cut(s)	808, 809
AsuHPI	GGTGA	3 cut(s)	213, 829, 1315
AsuNHI	GCTAGC	1 cut(s)	1319
AvaI	CYCGRG	2 cut(s)	807, 1093
BanII	GRGCYC	2 cut(s)	122, 478
BauI	CACGAG	1 cut(s)	1435
Bbv12I	GWGCWC	2 cut(s)	478, 977
BbvI	GCAGC	4 cut(s)	55, 374, 911, 1497
BccI	CCATC	2 cut(s)	233, 568
BceAI	ACGGC	1 cut(s)	1178
BciT130I	CCWGG	3 cut(s)	956, 1058, 1377
BciVI	GTATCC	1 cut(s)	1581
BclI	TGATCA	1 cut(s)	1087
BcnI	CCSGG	2 cut(s)	808, 809
BcoDI	GTCTC	4 cut(s)	250, 401, 1067, 1432
BfaI	CTAG	6 cut(s)	549, 1002, 1019, 1170, 1320, 1669
BfmI	CTRYAG	2 cut(s)	479, 1009
BfrI	CTTAAG	1 cut(s)	880
BfuI	GTATCC	1 cut(s)	1581
BglII	AGATCT	1 cut(s)	228
BisI	GCNGC	4 cut(s)	69, 363, 900, 1511
BlpI	GCTNAGC	1 cut(s)	1196
BlsI	GCNGC	4 cut(s)	70, 364, 901, 1512
Bme1390I	CCNGG	5 cut(s)	808, 809, 956, 1058, 1377
BmeRI	GACNNNNNGTC	1 cut(s)	1540
BmeT110I	CYCGRG	2 cut(s)	807, 1093
BmiI	GGNNCC	1 cut(s)	715
BmrFI	CCNGG	5 cut(s)	808, 809, 956, 1058, 1377
BmrI	ACTGGG	1 cut(s)	303
BmsI	GCATC	4 cut(s)	297, 385, 481, 758
BmtI	GCTAGC	1 cut(s)	1323
BmuI	ACTGGG	1 cut(s)	303
BpmI	CTGGAG	1 cut(s)	422
Bpu10I	CCTNAGC	1 cut(s)	1622
Bpu1102I	GCTNAGC	1 cut(s)	1196
BpuEI	CTTGAG	3 cut(s)	14, 505, 1568
BpuMI	CCSGG	2 cut(s)	808, 809
BsaHI	GRCGYC	1 cut(s)	243
BsaI	GGTCTC	1 cut(s)	1067
BsaJI	CCNNGG	4 cut(s)	807, 1029, 1057, 1376
BsaWI	WCCGGW	2 cut(s)	179, 1399
BsaXI	ACNNNNNCTCC	2 cut(s)	964, 994
Bsc4I	CCNNNNNNNGG	1 cut(s)	814
Bse118I	RCCGGY	1 cut(s)	1340
Bse1I	ACTGG	3 cut(s)	65, 298, 1133
Bse3DI	GCAATG	1 cut(s)	686
BseBI	CCWGG	3 cut(s)	956, 1058, 1377
BseDI	CCNNGG	4 cut(s)	807, 1029, 1057, 1376
BseGI	GGATG	6 cut(s)	244, 515, 721, 964, 1039, 1458
BseLI	CCNNNNNNNGG	1 cut(s)	814
BseMI	GCAATG	1 cut(s)	686
BseMII	CTCAG	2 cut(s)	153, 1322
BseNI	ACTGG	3 cut(s)	65, 298, 1133
BseRI	GAGGAG	3 cut(s)	17, 419, 1565
BseXI	GCAGC	4 cut(s)	55, 374, 911, 1497
BsgI	GTGCAG	2 cut(s)	381, 1095
Bsh1236I	CGCG	1 cut(s)	912
BshFI	GGCC	1 cut(s)	1484
BsiHKAI	GWGCWC	2 cut(s)	478, 977
BsiHKCI	CYCGRG	2 cut(s)	807, 1093
BsiSI	CCGG	4 cut(s)	180, 808, 1341, 1400
BslFI	GGGAC	3 cut(s)	1379, 1393, 1640
BslI	CCNNNNNNNGG	1 cut(s)	814
BsmAI	GTCTC	4 cut(s)	250, 401, 1067, 1432
BsmBI	CGTCTC	1 cut(s)	250
BsmFI	GGGAC	3 cut(s)	1379, 1393, 1640
BsnI	GGCC	1 cut(s)	1484
Bso31I	GGTCTC	1 cut(s)	1067
BsoBI	CYCGRG	2 cut(s)	807, 1093
Bsp1286I	GDGCHC	3 cut(s)	122, 478, 977
Bsp1407I	TGTACA	1 cut(s)	553
Bsp143I	GATC	6 cut(s)	228, 641, 819, 1087, 1313, 1465
Bsp1720I	GCTNAGC	1 cut(s)	1196
Bsp19I	CCATGG	1 cut(s)	1029
Bsp68I	TCGCGA	1 cut(s)	912
BspACI	CCGC	2 cut(s)	224, 893
BspANI	GGCC	1 cut(s)	1484
BspCNI	CTCAG	2 cut(s)	154, 1323
BspFNI	CGCG	1 cut(s)	912
BspLI	GGNNCC	1 cut(s)	715
BspOI	GCTAGC	1 cut(s)	1323
BspTI	CTTAAG	1 cut(s)	880
BspTNI	GGTCTC	1 cut(s)	1067
BsrDI	GCAATG	1 cut(s)	686
BsrFI	RCCGGY	1 cut(s)	1340
BsrGI	TGTACA	1 cut(s)	553
BsrI	ACTGG	3 cut(s)	65, 298, 1133
BssAI	RCCGGY	1 cut(s)	1340
BssECI	CCNNGG	4 cut(s)	807, 1029, 1057, 1376
BssMI	GATC	6 cut(s)	228, 641, 819, 1087, 1313, 1465
BssNI	GRCGYC	1 cut(s)	243
BssSI	CACGAG	1 cut(s)	1435
BssT1I	CCWWGG	1 cut(s)	1029
Bst2BI	CACGAG	1 cut(s)	1435
Bst2UI	CCWGG	3 cut(s)	956, 1058, 1377
Bst4CI	ACNGT	3 cut(s)	483, 871, 1432
BstACI	GRCGYC	1 cut(s)	243
BstAFI	CTTAAG	1 cut(s)	880
BstAPI	GCANNNNNTGC	1 cut(s)	1166
BstAUI	TGTACA	1 cut(s)	553
BstC8I	GCNNGC	5 cut(s)	66, 1047, 1167, 1228, 1321
BstDEI	CTNAG	6 cut(s)	162, 232, 346, 1196, 1331, 1622
BstDSI	CCRYGG	1 cut(s)	1029
BstEII	GGTNACC	1 cut(s)	1100
BstF5I	GGATG	6 cut(s)	244, 515, 721, 964, 1039, 1458
BstFNI	CGCG	1 cut(s)	912
BstKTI	GATC	6 cut(s)	231, 644, 822, 1090, 1316, 1468
BstMAI	GTCTC	4 cut(s)	250, 401, 1067, 1432
BstMBI	GATC	6 cut(s)	228, 641, 819, 1087, 1313, 1465
BstMWI	GCNNNNNNNGC	6 cut(s)	117, 737, 746, 899, 1166, 1232
BstNI	CCWGG	3 cut(s)	956, 1058, 1377
BstNSI	RCATGY	2 cut(s)	1169, 1329
BstPI	GGTNACC	1 cut(s)	1100
BstSCI	CCNGG	5 cut(s)	806, 807, 954, 1056, 1375
BstSFI	CTRYAG	2 cut(s)	479, 1009
BstUI	CGCG	1 cut(s)	912
BstV1I	GCAGC	4 cut(s)	55, 374, 911, 1497
BstX2I	RGATCY	1 cut(s)	228
BstYI	RGATCY	1 cut(s)	228
BsuI	GTATCC	1 cut(s)	1581
BsuRI	GGCC	1 cut(s)	1484
BtgI	CCRYGG	1 cut(s)	1029
BtsCI	GGATG	6 cut(s)	244, 515, 721, 964, 1039, 1458
BtsI	GCAGTG	2 cut(s)	364, 949
BtsIMutI	CAGTG	3 cut(s)	58, 364, 949
BtuMI	TCGCGA	1 cut(s)	912
Cac8I	GCNNGC	5 cut(s)	66, 1047, 1167, 1228, 1321
Cfr10I	RCCGGY	1 cut(s)	1340
Cfr9I	CCCGGG	1 cut(s)	807
CseI	GACGC	1 cut(s)	232
Csp6I	GTAC	3 cut(s)	202, 554, 614
CspCI	CAANNNNNGTGG	2 cut(s)	1137, 1172
CviAII	CATG	6 cut(s)	1030, 1166, 1252, 1326, 1447, 1463
CviQI	GTAC	3 cut(s)	202, 554, 614
DdeI	CTNAG	6 cut(s)	162, 232, 346, 1196, 1331, 1622
DpnI	GATC	6 cut(s)	230, 643, 821, 1089, 1315, 1467
DpnII	GATC	6 cut(s)	228, 641, 819, 1087, 1313, 1465
DriI	GACNNNNNGTC	1 cut(s)	1540
Eam1105I	GACNNNNNGTC	1 cut(s)	1540
EciI	GGCGGA	1 cut(s)	908
Ecl136II	GAGCTC	1 cut(s)	476
Eco130I	CCWWGG	1 cut(s)	1029
Eco24I	GRGCYC	2 cut(s)	122, 478
Eco31I	GGTCTC	1 cut(s)	1067
Eco53kI	GAGCTC	1 cut(s)	476
Eco57I	CTGAAG	2 cut(s)	215, 1443
Eco88I	CYCGRG	2 cut(s)	807, 1093
Eco91I	GGTNACC	1 cut(s)	1100
EcoICRI	GAGCTC	1 cut(s)	476
EcoO65I	GGTNACC	1 cut(s)	1100
EcoRII	CCWGG	3 cut(s)	954, 1056, 1375
EcoT14I	CCWWGG	1 cut(s)	1029
EcoT38I	GRGCYC	2 cut(s)	122, 478
ErhI	CCWWGG	1 cut(s)	1029
Esp3I	CGTCTC	1 cut(s)	250
FaeI	CATG	6 cut(s)	1033, 1169, 1255, 1329, 1450, 1466
FalI	AAGNNNNNCTT	4 cut(s)	23, 55, 435, 467
FaqI	GGGAC	3 cut(s)	1379, 1393, 1640
FatI	CATG	6 cut(s)	1029, 1165, 1251, 1325, 1446, 1462
FbaI	TGATCA	1 cut(s)	1087
FblI	GTMKAC	1 cut(s)	769
Fnu4HI	GCNGC	4 cut(s)	69, 363, 900, 1511
FokI	GGATG	6 cut(s)	251, 502, 708, 971, 1046, 1445
FriOI	GRGCYC	2 cut(s)	122, 478
Fsp4HI	GCNGC	4 cut(s)	69, 363, 900, 1511
FspBI	CTAG	6 cut(s)	549, 1002, 1019, 1170, 1320, 1669
GluI	GCNGC	4 cut(s)	69, 363, 900, 1511
GsuI	CTGGAG	1 cut(s)	422
HaeIII	GGCC	1 cut(s)	1484
HapII	CCGG	4 cut(s)	180, 808, 1341, 1400
HgaI	GACGC	1 cut(s)	232
Hin1I	GRCGYC	1 cut(s)	243
Hin1II	CATG	6 cut(s)	1033, 1169, 1255, 1329, 1450, 1466
HincII	GTYRAC	1 cut(s)	804
HindII	GTYRAC	1 cut(s)	804
HindIII	AAGCTT	3 cut(s)	265, 523, 1562
HinfI	GANTC	4 cut(s)	350, 860, 1107, 1308
HpaII	CCGG	4 cut(s)	180, 808, 1341, 1400
HphI	GGTGA	3 cut(s)	213, 829, 1315
Hpy166II	GTNNAC	4 cut(s)	202, 554, 770, 804
Hpy188III	TCNNGA	8 cut(s)	392, 401, 504, 645, 911, 1149, 1435, 1615
Hpy8I	GTNNAC	4 cut(s)	202, 554, 770, 804
HpyAV	CCTTC	9 cut(s)	90, 161, 190, 459, 557, 625, 704, 910, 1483
HpyCH4III	ACNGT	3 cut(s)	483, 871, 1432
HpyCH4IV	ACGT	1 cut(s)	616
HpyCH4V	TGCA	8 cut(s)	317, 357, 362, 937, 1045, 1069, 1076, 1280
HpyF10VI	GCNNNNNNNGC	6 cut(s)	117, 737, 746, 899, 1166, 1232
HpyF3I	CTNAG	6 cut(s)	162, 232, 346, 1196, 1331, 1622
HpySE526I	ACGT	1 cut(s)	616
Hsp92I	GRCGYC	1 cut(s)	243
Hsp92II	CATG	6 cut(s)	1033, 1169, 1255, 1329, 1450, 1466
Ksp22I	TGATCA	1 cut(s)	1087
Kzo9I	GATC	6 cut(s)	228, 641, 819, 1087, 1313, 1465
LmnI	GCTCC	2 cut(s)	473, 972
Lsp1109I	GCAGC	4 cut(s)	55, 374, 911, 1497
LweI	GCATC	4 cut(s)	297, 385, 481, 758
MaeI	CTAG	6 cut(s)	549, 1002, 1019, 1170, 1320, 1669
MaeII	ACGT	1 cut(s)	616
MaeIII	GTNAC	5 cut(s)	378, 924, 1100, 1432, 1542
MalI	GATC	6 cut(s)	230, 643, 821, 1089, 1315, 1467
MboI	GATC	6 cut(s)	228, 641, 819, 1087, 1313, 1465
MboII	GAAGA	4 cut(s)	651, 669, 1436, 1606
MflI	RGATCY	1 cut(s)	228
MhlI	GDGCHC	3 cut(s)	122, 478, 977
MluCI	AATT	8 cut(s)	418, 458, 826, 837, 932, 1182, 1275, 1391
MmeI	TCCRAC	2 cut(s)	309, 417
MseI	TTAA	7 cut(s)	339, 431, 813, 840, 881, 1523, 1649
MspCI	CTTAAG	1 cut(s)	880
MspI	CCGG	4 cut(s)	180, 808, 1341, 1400
MspR9I	CCNGG	5 cut(s)	808, 809, 956, 1058, 1377
MvaI	CCWGG	3 cut(s)	956, 1058, 1377
MvnI	CGCG	1 cut(s)	912
MwoI	GCNNNNNNNGC	6 cut(s)	117, 737, 746, 899, 1166, 1232
NciI	CCSGG	2 cut(s)	808, 809
NcoI	CCATGG	1 cut(s)	1029
NdeII	GATC	6 cut(s)	228, 641, 819, 1087, 1313, 1465
NheI	GCTAGC	1 cut(s)	1319
NlaIII	CATG	6 cut(s)	1033, 1169, 1255, 1329, 1450, 1466
NlaIV	GGNNCC	1 cut(s)	715
NmeAIII	GCCGAG	1 cut(s)	110
NmuCI	GTSAC	2 cut(s)	1432, 1542
NruI	TCGCGA	1 cut(s)	912
NspI	RCATGY	2 cut(s)	1169, 1329
PaeI	GCATGC	1 cut(s)	1169
PaeR7I	CTCGAG	1 cut(s)	1093
PciI	ACATGT	1 cut(s)	1325
PcsI	WCGNNNNNNNCGW	1 cut(s)	287
PfeI	GAWTC	4 cut(s)	350, 860, 1107, 1308
PkrI	GCNGC	4 cut(s)	70, 364, 901, 1512
PscI	ACATGT	1 cut(s)	1325
PsiI	TTATAA	1 cut(s)	968
Psp124BI	GAGCTC	1 cut(s)	478
Psp6I	CCWGG	3 cut(s)	954, 1056, 1375
PspEI	GGTNACC	1 cut(s)	1100
PspGI	CCWGG	3 cut(s)	954, 1056, 1375
PspN4I	GGNNCC	1 cut(s)	715
PspXI	VCTCGAGB	1 cut(s)	1093
PsuI	RGATCY	1 cut(s)	228
RruI	TCGCGA	1 cut(s)	912
RsaI	GTAC	3 cut(s)	203, 555, 615
RsaNI	GTAC	3 cut(s)	202, 554, 614
SacI	GAGCTC	1 cut(s)	478
SaqAI	TTAA	7 cut(s)	339, 431, 813, 840, 881, 1523, 1649
SatI	GCNGC	4 cut(s)	69, 363, 900, 1511
Sau3AI	GATC	6 cut(s)	228, 641, 819, 1087, 1313, 1465
ScrFI	CCNGG	5 cut(s)	808, 809, 956, 1058, 1377
SduI	GDGCHC	3 cut(s)	122, 478, 977
SfaNI	GCATC	4 cut(s)	297, 385, 481, 758
SfcI	CTRYAG	2 cut(s)	479, 1009
Sfr274I	CTCGAG	1 cut(s)	1093
SlaI	CTCGAG	1 cut(s)	1093
SmaI	CCCGGG	1 cut(s)	809
SmlI	CTYRAG	5 cut(s)	29, 520, 880, 1093, 1547
SmoI	CTYRAG	5 cut(s)	29, 520, 880, 1093, 1547
SphI	GCATGC	1 cut(s)	1169
Sse9I	AATT	8 cut(s)	418, 458, 826, 837, 932, 1182, 1275, 1391
SsiI	CCGC	2 cut(s)	224, 893
SspMI	CTAG	6 cut(s)	549, 1002, 1019, 1170, 1320, 1669
SstI	GAGCTC	1 cut(s)	478
StyD4I	CCNGG	5 cut(s)	806, 807, 954, 1056, 1375
StyI	CCWWGG	1 cut(s)	1029
TaaI	ACNGT	3 cut(s)	483, 871, 1432
TaiI	ACGT	1 cut(s)	619
TaqI	TCGA	4 cut(s)	760, 1094, 1487, 1569
TasI	AATT	8 cut(s)	418, 458, 826, 837, 932, 1182, 1275, 1391
TatI	WGTACW	2 cut(s)	201, 553
TfiI	GAWTC	4 cut(s)	350, 860, 1107, 1308
Tru1I	TTAA	7 cut(s)	339, 431, 813, 840, 881, 1523, 1649
Tru9I	TTAA	7 cut(s)	339, 431, 813, 840, 881, 1523, 1649
TscAI	CASTG	3 cut(s)	65, 364, 956
TseFI	GTSAC	2 cut(s)	1432, 1542
TseI	GCWGC	4 cut(s)	68, 362, 899, 1510
Tsp45I	GTSAC	2 cut(s)	1432, 1542
TspDTI	ATGAA	6 cut(s)	38, 201, 723, 1287, 1463, 1647
TspGWI	ACGGA	2 cut(s)	336, 1606
TspMI	CCCGGG	1 cut(s)	807
TspRI	CASTG	3 cut(s)	65, 364, 956
Vha464I	CTTAAG	1 cut(s)	880
XapI	RAATTY	2 cut(s)	1182, 1391
XceI	RCATGY	2 cut(s)	1169, 1329
XhoI	CTCGAG	1 cut(s)	1093
XmaI	CCCGGG	1 cut(s)	807
XmiI	GTMKAC	1 cut(s)	769
XspI	CTAG	6 cut(s)	549, 1002, 1019, 1170, 1320, 1669

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.